Query 004722
Match_columns 733
No_of_seqs 158 out of 764
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 11:48:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004722.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004722hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 7E-241 2E-245 2033.5 63.1 731 2-733 16-785 (785)
2 PLN00151 potassium transporter 100.0 7E-239 1E-243 2014.5 61.7 727 2-733 98-852 (852)
3 PLN00149 potassium transporter 100.0 3E-238 6E-243 2014.7 64.1 732 2-733 15-779 (779)
4 PLN00150 potassium ion transpo 100.0 3E-237 6E-242 2002.5 62.9 722 2-733 41-779 (779)
5 TIGR00794 kup potassium uptake 100.0 9E-229 2E-233 1925.9 59.0 687 10-733 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 9E-217 2E-221 1803.2 54.3 610 8-733 10-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 7E-209 1E-213 1698.2 51.5 611 6-733 14-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 5E-199 1E-203 1648.6 43.2 534 11-586 1-534 (534)
9 TIGR00911 2A0308 L-type amino 92.6 0.27 5.8E-06 56.4 7.3 101 182-286 166-272 (501)
10 PF13520 AA_permease_2: Amino 88.4 1.1 2.4E-05 49.7 7.1 253 153-421 87-369 (426)
11 TIGR00930 2a30 K-Cl cotranspor 80.4 34 0.00073 43.3 15.5 25 181-205 203-227 (953)
12 TIGR00909 2A0306 amino acid tr 78.6 13 0.00029 41.5 10.3 207 183-407 135-356 (429)
13 COG0531 PotE Amino acid transp 78.3 17 0.00036 40.6 11.1 177 180-362 133-324 (466)
14 PRK15049 L-asparagine permease 75.1 21 0.00044 41.5 10.9 22 184-205 147-168 (499)
15 PRK10435 cadB lysine/cadaverin 72.9 52 0.0011 37.2 13.3 23 184-206 124-146 (435)
16 TIGR00907 2A0304 amino acid pe 70.0 31 0.00066 39.5 10.7 25 182-206 144-168 (482)
17 TIGR03813 put_Glu_GABA_T putat 69.6 44 0.00094 38.2 11.8 45 257-301 200-246 (474)
18 TIGR03810 arg_ornith_anti argi 64.7 79 0.0017 36.1 12.6 45 319-363 273-317 (468)
19 PRK10655 potE putrescine trans 57.8 96 0.0021 34.9 11.6 43 183-225 125-170 (438)
20 TIGR00908 2A0305 ethanolamine 57.7 61 0.0013 36.5 10.0 24 183-206 123-146 (442)
21 PRK11357 frlA putative fructos 51.0 64 0.0014 36.5 8.8 98 183-290 129-236 (445)
22 PRK10249 phenylalanine transpo 49.8 1.1E+02 0.0025 34.8 10.6 103 184-288 138-248 (458)
23 TIGR00906 2A0303 cationic amin 49.7 2.1E+02 0.0045 34.0 13.0 44 182-225 162-208 (557)
24 TIGR00910 2A0307_GadC glutamat 48.5 2.2E+02 0.0047 33.2 12.8 42 259-300 202-245 (507)
25 PF06570 DUF1129: Protein of u 46.8 54 0.0012 33.7 6.7 21 461-481 179-199 (206)
26 COG4059 MtrE Tetrahydromethano 46.6 17 0.00037 38.2 3.0 30 459-488 259-288 (304)
27 PF14362 DUF4407: Domain of un 44.4 96 0.0021 33.5 8.5 47 400-446 12-58 (301)
28 PRK11021 putative transporter; 44.2 3.5E+02 0.0077 30.2 13.2 27 181-207 115-141 (410)
29 PRK10238 aromatic amino acid t 43.0 1E+02 0.0022 35.2 8.9 113 184-300 129-250 (456)
30 PRK10580 proY putative proline 42.1 1.7E+02 0.0037 33.3 10.4 100 185-288 127-238 (457)
31 PRK10644 arginine:agmatin anti 40.4 1.5E+02 0.0032 33.6 9.6 22 184-205 128-149 (445)
32 PRK10746 putative transport pr 39.1 2.1E+02 0.0046 32.7 10.7 26 462-487 427-452 (461)
33 TIGR00905 2A0302 transporter, 39.0 1.3E+02 0.0028 34.5 8.9 23 183-205 131-153 (473)
34 TIGR01773 GABAperm gamma-amino 38.8 5.2E+02 0.011 29.3 13.7 44 183-226 128-174 (452)
35 KOG3788 Predicted divalent cat 35.2 1.7E+02 0.0037 33.6 8.7 25 336-361 112-136 (441)
36 KOG3643 GABA receptor [Signal 34.7 41 0.00089 38.8 3.9 86 356-445 225-319 (459)
37 PRK11049 D-alanine/D-serine/gl 34.5 2.3E+02 0.0049 32.5 10.0 105 257-362 217-332 (469)
38 PRK11387 S-methylmethionine tr 33.2 3.4E+02 0.0073 31.1 11.1 21 185-205 133-153 (471)
39 KOG4742 Predicted chitinase [G 32.4 19 0.00042 39.1 0.9 37 273-315 171-210 (286)
40 TIGR00913 2A0310 amino acid pe 29.5 3.5E+02 0.0076 30.8 10.4 29 260-288 206-236 (478)
41 KOG3145 Cystine transporter Cy 24.7 75 0.0016 35.1 3.6 88 186-284 214-341 (372)
42 TIGR03428 ureacarb_perm permea 21.0 1.3E+03 0.028 26.4 14.2 24 182-205 145-168 (475)
43 PF08733 PalH: PalH/RIM21; In 21.0 2.5E+02 0.0054 31.5 6.9 140 342-490 167-325 (348)
44 PF05545 FixQ: Cbb3-type cytoc 20.6 72 0.0016 25.4 1.9 28 471-498 20-47 (49)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=7e-241 Score=2033.49 Aligned_cols=731 Identities=54% Similarity=0.986 Sum_probs=676.9
Q ss_pred hhHHH---HHHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCC
Q 004722 2 KWYKT---TLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGE 78 (733)
Q Consensus 2 ~~~~~---~~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GE 78 (733)
++|++ ++.|++||||||||||||||||||+++|+++++.++++|||+|+||||||||||++++|||+||||||||||
T Consensus 16 ~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GE 95 (785)
T PLN00148 16 LSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGE 95 (785)
T ss_pred chhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCC
Confidence 46877 889999999999999999999999999987666678999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCccccc
Q 004722 79 GGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTP 158 (733)
Q Consensus 79 GG~~AL~sL~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTP 158 (733)
|||||||||+||++|++.+||||++|+++++|+.+.++.+ +.+.++|+++|+|++.|++++++|++|+||+||||+|||
T Consensus 96 GG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP 174 (785)
T PLN00148 96 GGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP 174 (785)
T ss_pred chHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999999999999999999999999999999988655555 445569999999999999999999999999999999999
Q ss_pred chhhhhhhccccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecC
Q 004722 159 AMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALS 238 (733)
Q Consensus 159 AiSVlSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~Aln 238 (733)
|||||||||||+++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+|
T Consensus 175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln 254 (785)
T PLN00148 175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS 254 (785)
T ss_pred hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCcccc
Q 004722 239 PYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFK 318 (733)
Q Consensus 239 P~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~ 318 (733)
|+||++||.+||.+||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+
T Consensus 255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~ 334 (785)
T PLN00148 255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD 334 (785)
T ss_pred HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecC
Q 004722 319 AIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRD 398 (733)
Q Consensus 319 ~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~ 398 (733)
++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhh
Q 004722 399 TDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCI 478 (733)
Q Consensus 399 s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~ 478 (733)
|++||+|||+||++||++||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHhhhhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccC
Q 004722 479 WQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVP 558 (733)
Q Consensus 479 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~ 558 (733)
||||++++++++.++++|++++.++.++.++.||||+|+|||++.+++|++|.||++|||++||++|||||+++|+||||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999998887777788999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCC-----CCCCCccccccCCCCC--
Q 004722 559 LNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDT-----GASGGEMIVNHQQSSP-- 631 (733)
Q Consensus 559 ~eeR~~v~~l~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~-----~~sd~~~~~~~~~~~~-- 631 (733)
++||+.++++++++|++|||++||||||..+.+++||++|+++|++|||+|+.+.+. .++|++++..+.+...
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 999999999999888999999999999999889999999999999999999854210 1112333333221110
Q ss_pred -------C-----------cC-C---CccccccCCCCC-ccccceeeccC------CCchhhhHHHHHHHhcCcEEEEec
Q 004722 632 -------Q-----------VD-A---VVPRVENGNGGG-AMQKKVRFRGV------GCNNRELEELEEARESGLAYMMGN 682 (733)
Q Consensus 632 -------~-----------~~-~---~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~El~~l~~a~~~~v~YfLGr 682 (733)
+ .+ . +.++..|.++++ ..+++.+++.+ ++.+||+++|++|+|+|++|++||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~ 734 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGH 734 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEecc
Confidence 0 00 0 111111222222 12234444322 357899999999999999999999
Q ss_pred eEEEecCCCchhHHHhHHHHHHHHHhhccCccccccCCCCCEEEEeeEEEC
Q 004722 683 TCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV 733 (733)
Q Consensus 683 ~~l~a~~~S~~~krl~in~vF~fLrrN~r~~~~~f~IP~~rvVEVG~~yei 733 (733)
+++++|++|+|+||++||++|.|||||||++...|+|||+|++||||+|||
T Consensus 735 s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 735 SYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred ceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999997
No 2
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=6.5e-239 Score=2014.48 Aligned_cols=727 Identities=44% Similarity=0.818 Sum_probs=671.9
Q ss_pred hhHHHHHHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchH
Q 004722 2 KWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGT 81 (733)
Q Consensus 2 ~~~~~~~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~ 81 (733)
..|++ +.|+|||+|||||||||||||||+++|++. + .+++|||+|+|||||||||||+++|||+|||||||||||||
T Consensus 98 ~~w~~-l~La~qslGVVyGDIGTSPLYv~~s~F~~~-~-~~~~~dIlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGt 174 (852)
T PLN00151 98 SVGRT-LALAFQTLGVVFGDVGTSPLYTFSVMFSKV-P-IKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGT 174 (852)
T ss_pred cHHHH-HHHHHhhhceEeCcCCCCHHHHHHHHhcCC-C-CCChhheeeehHHHHHHHHHHHHHhheeEEEEecCCCCchH
Confidence 45766 779999999999999999999999999751 1 24899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchh
Q 004722 82 FALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMS 161 (733)
Q Consensus 82 ~AL~sL~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiS 161 (733)
||||||+|||+|++++||||++|+++|+|+.+.++++.++++++|++||+|++.|++++++|++|+||+|||||||||||
T Consensus 175 fALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAIS 254 (852)
T PLN00151 175 FALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMS 254 (852)
T ss_pred HHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchh
Confidence 99999999999999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHH
Q 004722 162 VLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYY 241 (733)
Q Consensus 162 VlSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~y 241 (733)
||||||||+++.|++++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|
T Consensus 255 VLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y 334 (852)
T PLN00151 255 VMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVY 334 (852)
T ss_pred hhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHH
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCccccccc
Q 004722 242 VYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIP 321 (733)
Q Consensus 242 a~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P 321 (733)
|++||.+||.+||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|
T Consensus 335 ~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP 414 (852)
T PLN00151 335 IYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVP 414 (852)
T ss_pred HHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchh
Q 004722 322 EAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDM 401 (733)
Q Consensus 322 ~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~ 401 (733)
+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++
T Consensus 415 ~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~ 494 (852)
T PLN00151 415 SSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITD 494 (852)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhh
Q 004722 402 IANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQY 481 (733)
Q Consensus 402 l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~ 481 (733)
||+|||+||++||++||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|||
T Consensus 495 l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~y 574 (852)
T PLN00151 495 IGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNY 574 (852)
T ss_pred HHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCc
Q 004722 482 GTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQ 561 (733)
Q Consensus 482 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~ee 561 (733)
|++++++++.++++|++++.++.++.++.||||+|+|||++.+++|++|.||++|||++||++||||||++|+|||+++|
T Consensus 575 G~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~e 654 (852)
T PLN00151 575 GSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEE 654 (852)
T ss_pred HHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhh
Confidence 99999999999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCccEEEEEEEEeeecccc-cHHHHHHHHHHHHHHHHhcCCCCCCCCCC---CC------ccccccCCCCC
Q 004722 562 QFHVSRIGPQEFHFFHCIVRYGYKDARK-EIYAFESHLIDTVAEFLHTSSNDWDTGAS---GG------EMIVNHQQSSP 631 (733)
Q Consensus 562 R~~v~~l~~~~~g~yRv~lryGYme~p~-vp~~l~~~li~~L~~fI~~e~~~~~~~~s---d~------~~~~~~~~~~~ 631 (733)
|+.+++++++++|+|||++||||||..+ .+++||++|+++|++|||+|+.+...+++ +. +++.....++.
T Consensus 655 R~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (852)
T PLN00151 655 RFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNG 734 (852)
T ss_pred eEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCc
Confidence 9999999999999999999999999975 78999999999999999999854211111 00 00111100100
Q ss_pred CcCC-Ccc----------ccc------cCCCCCccccceeec-cCCCchhhhHHHHHHHhcCcEEEEeceEEEecCCCch
Q 004722 632 QVDA-VVP----------RVE------NGNGGGAMQKKVRFR-GVGCNNRELEELEEARESGLAYMMGNTCVLASETSSY 693 (733)
Q Consensus 632 ~~~~-~~~----------~~~------~~~~~~~~~~~~~~~-~~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~~~S~~ 693 (733)
..+. +.+ +.. |.+.+. .+..++. .+++.+||+++|++|+|+|++|++||+++++|++|+|
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~ 812 (852)
T PLN00151 735 SVYSLGVPLLADYRLTSKPIPEASTSEEVSPVL--PSSSMSSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWF 812 (852)
T ss_pred ccccccccccccccccccccccccccccccccc--cccccccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcH
Confidence 0000 000 000 000000 0111111 1235789999999999999999999999999999999
Q ss_pred hHHHhHHHHHHHHHhhccCccccccCCCCCEEEEeeEEEC
Q 004722 694 LKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV 733 (733)
Q Consensus 694 ~krl~in~vF~fLrrN~r~~~~~f~IP~~rvVEVG~~yei 733 (733)
+||++||++|+|||||||++...|+|||+|++||||+|||
T Consensus 813 ~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 813 IKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999997
No 3
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=2.6e-238 Score=2014.65 Aligned_cols=732 Identities=52% Similarity=0.941 Sum_probs=670.6
Q ss_pred hhHHHHHHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchH
Q 004722 2 KWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGT 81 (733)
Q Consensus 2 ~~~~~~~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~ 81 (733)
.+|++++.|++||+|||||||||||||||+++|+++++.++++|||+|+||||||||||++++|||+|||||||||||||
T Consensus 15 ~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv~ivlrAdn~GEGGt 94 (779)
T PLN00149 15 ESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGT 94 (779)
T ss_pred ccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhEEEEEEecCCCCchH
Confidence 47999999999999999999999999999999987666678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCcccccccCCCccc---ccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCccccc
Q 004722 82 FALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKE---TRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTP 158 (733)
Q Consensus 82 ~AL~sL~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTP 158 (733)
||||||+|||+|.+++||||++|+++++|+++.++.+ .+++.++|++||+|+..|++++++|++|+||+||||+|||
T Consensus 95 fALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDgvlTP 174 (779)
T PLN00149 95 FALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTP 174 (779)
T ss_pred HHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999999999999999999999999999988765433 3446779999999998999999999999999999999999
Q ss_pred chhhhhhhccccccccCCCCceE-eehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeec
Q 004722 159 AMSVLSAINGIKVKATGLDENYT-VLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRAL 237 (733)
Q Consensus 159 AiSVlSAVeGl~v~~p~~~~~~v-v~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~Al 237 (733)
|||||||||||++..|...++++ +||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+
T Consensus 175 AISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~Al 254 (779)
T PLN00149 175 AISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQAL 254 (779)
T ss_pred hHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhc
Confidence 99999999999999966444355 99999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcC---cccC
Q 004722 238 SPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKE---DLER 314 (733)
Q Consensus 238 nP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~---~~~n 314 (733)
||+||++||.+||..||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+ +.+|
T Consensus 255 nP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~ 334 (779)
T PLN00149 255 SPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRI 334 (779)
T ss_pred CHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 4556
Q ss_pred cccccccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEE
Q 004722 315 SFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVV 394 (733)
Q Consensus 315 pFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~ 394 (733)
|||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|+
T Consensus 335 pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~ 414 (779)
T PLN00149 335 GFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTV 414 (779)
T ss_pred cHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCchhhhhhhcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHh
Q 004722 395 GFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLS 474 (733)
Q Consensus 395 ~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~ 474 (733)
+||||++||+|||+||++||++||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|+++++
T Consensus 415 ~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~ 494 (779)
T PLN00149 415 GFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLL 494 (779)
T ss_pred EecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHhhhhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecc
Q 004722 475 IMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTV 554 (733)
Q Consensus 475 iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~v 554 (733)
+|++||||++++++++.++++|++++.++.++.++.||||+|+|||++.+++|++|.||++|||++||++|||||+++|+
T Consensus 495 iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~v 574 (779)
T PLN00149 495 VMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPV 574 (779)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcc
Confidence 99999999999999999999999999888887778899999999999999999999999999999999999999999999
Q ss_pred cccCCCceEEEEEecCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCC--C---CCCCccccccCCC
Q 004722 555 PYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDT--G---ASGGEMIVNHQQS 629 (733)
Q Consensus 555 P~V~~eeR~~v~~l~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~--~---~sd~~~~~~~~~~ 629 (733)
|+||++||+.+++++++++++|||++||||||..+.+++||++|+++|++|||+|+.+... + ++|++++..+.++
T Consensus 575 P~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (779)
T PLN00149 575 PHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCS 654 (779)
T ss_pred cccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccc
Confidence 9999999999999999888999999999999998889999999999999999999753210 1 1123333332222
Q ss_pred CCCc----------C--C-CccccccCCCC--Cccccceeecc------CCCchhhhHHHHHHHhcCcEEEEeceEEEec
Q 004722 630 SPQV----------D--A-VVPRVENGNGG--GAMQKKVRFRG------VGCNNRELEELEEARESGLAYMMGNTCVLAS 688 (733)
Q Consensus 630 ~~~~----------~--~-~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~ 688 (733)
.+.+ + + +..+.....++ ...+++.+++. +++.+||+++|++|+|+|++|++||+++++|
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar 734 (779)
T PLN00149 655 THLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAK 734 (779)
T ss_pred ccccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEc
Confidence 1100 0 0 00000000000 00112333322 2357899999999999999999999999999
Q ss_pred CCCchhHHHhHHHHHHHHHhhccCccccccCCCCCEEEEeeEEEC
Q 004722 689 ETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV 733 (733)
Q Consensus 689 ~~S~~~krl~in~vF~fLrrN~r~~~~~f~IP~~rvVEVG~~yei 733 (733)
++|+|+||++||++|+|||||||++...|+|||+|++||||+|||
T Consensus 735 ~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 735 QGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred CCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=2.9e-237 Score=2002.49 Aligned_cols=722 Identities=45% Similarity=0.883 Sum_probs=665.2
Q ss_pred hhHHHHHHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchH
Q 004722 2 KWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGT 81 (733)
Q Consensus 2 ~~~~~~~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~ 81 (733)
.+|+.++.|++||+|||||||||||||||+++|++.+ .+++|||+|+||||||||||++++|||+|||||||||||||
T Consensus 41 ~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~--~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGt 118 (779)
T PLN00150 41 NWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVG--VKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGS 118 (779)
T ss_pred ccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCC--CCCHHHhHhHHHHHHHHHHHHHHHhheeEEEEccCCCCcch
Confidence 3688889999999999999999999999999996532 46899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchh
Q 004722 82 FALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMS 161 (733)
Q Consensus 82 ~AL~sL~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiS 161 (733)
||||||+|||+|++++||+++.|+++++|+.+ +..+..++|+++|+|+..|++++++|++|+||+||||+||||||
T Consensus 119 fALysLl~r~aki~l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAIS 194 (779)
T PLN00150 119 FALYSLLCRYCNISLLPNQHPTDVELTTYVVD----NMNRKTRIQRKLENSRVWQNVLLLIVLLGTCMVIGDGILTPSIS 194 (779)
T ss_pred hhHHHHHhhhcccccCCccccchhhhhhcccc----cchhhhHHHHhhhcchHHHHHHHHHHHHHHHHHhcccccccchh
Confidence 99999999999999999999999999988753 22333459999999998999999999999999999999999999
Q ss_pred hhhhhccccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHH
Q 004722 162 VLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYY 241 (733)
Q Consensus 162 VlSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~y 241 (733)
||||||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|
T Consensus 195 VLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y 274 (779)
T PLN00150 195 VLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLY 274 (779)
T ss_pred hhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHH
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCccccccc
Q 004722 242 VYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIP 321 (733)
Q Consensus 242 a~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P 321 (733)
|++||.+||.+||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|
T Consensus 275 ~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP 354 (779)
T PLN00150 275 IVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLP 354 (779)
T ss_pred HHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchh
Q 004722 322 EAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDM 401 (733)
Q Consensus 322 ~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~ 401 (733)
+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++
T Consensus 355 ~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~ 434 (779)
T PLN00150 355 KPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDE 434 (779)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhh
Q 004722 402 IANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQY 481 (733)
Q Consensus 402 l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~ 481 (733)
||+|||+||++||++||+|+++||+.+|||+++++++|+++|+++|+.|||||+.||+||||+||++|++++++|++|||
T Consensus 435 l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~ 514 (779)
T PLN00150 435 IGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHY 514 (779)
T ss_pred HHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCc
Q 004722 482 GTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQ 561 (733)
Q Consensus 482 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~ee 561 (733)
|++++++++.++++|+++|.++.++.++.||||+|+|||++++++|++|.||++|||++||++|||||+++|+|+||++|
T Consensus 515 G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~e 594 (779)
T PLN00150 515 GTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDE 594 (779)
T ss_pred HHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhh
Confidence 99999999999999999998887777788999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccCCCC-----CC---c
Q 004722 562 QFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSS-----PQ---V 633 (733)
Q Consensus 562 R~~v~~l~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~~~sd~~~~~~~~~~~-----~~---~ 633 (733)
|++++++++++|++|||++||||||+.+.+++||++|+++|++|||+|+.+...+ ++ .++....+++ ++ .
T Consensus 595 R~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 672 (779)
T PLN00150 595 RFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSD-LE-SMAASWTPEELMGEGNSVGSG 672 (779)
T ss_pred eEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhccccc-cc-ccccccccccccccCCccccc
Confidence 9999999998888999999999999988899999999999999999997542111 11 1111110000 00 0
Q ss_pred ---C-----CCccccccCCCCCccccceeec-cCCCchhhhHHHHHHHhcCcEEEEeceEEEecCCCchhHHHhHHHHHH
Q 004722 634 ---D-----AVVPRVENGNGGGAMQKKVRFR-GVGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYG 704 (733)
Q Consensus 634 ---~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~~~S~~~krl~in~vF~ 704 (733)
+ .+.++.++.+.+. .+..+++ .+++.+||+++|++|+|+|++|++||+++++|++|+|+||++||++|+
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~ 750 (779)
T PLN00150 673 LFTQYDQSDINFATSQEWKRPS--SQEDSVSGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYT 750 (779)
T ss_pred cccccccccccccccccccccc--ccccccccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHH
Confidence 0 0000111111110 0111221 124679999999999999999999999999999999999999999999
Q ss_pred HHHhhccCccccccCCCCCEEEEeeEEEC
Q 004722 705 FLRRNCRRPATALGVPNASLIEVGMVYRV 733 (733)
Q Consensus 705 fLrrN~r~~~~~f~IP~~rvVEVG~~yei 733 (733)
|||||||++...|+|||+|++||||+|||
T Consensus 751 FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 751 FLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=9e-229 Score=1925.88 Aligned_cols=687 Identities=45% Similarity=0.824 Sum_probs=649.5
Q ss_pred HHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchHHHHHHHHh
Q 004722 10 LAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILC 89 (733)
Q Consensus 10 la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~~AL~sL~~ 89 (733)
|++||||||||||||||||||+++|+++ ++++|||+|+|||||||||++|++|||++||||||||||||||||||+|
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~---~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~ 77 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGG---FPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIG 77 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHH
Confidence 5799999999999999999999999653 4589999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchhhhhhhccc
Q 004722 90 RRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGI 169 (733)
Q Consensus 90 r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVlSAVeGl 169 (733)
|++|.+.+|++++.|+++++|+.+.+++ ..+..++|+++|++++.|++++++|++|+||++|||+||||||||||||||
T Consensus 78 r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl 156 (688)
T TIGR00794 78 RYAKISARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGL 156 (688)
T ss_pred HhccccCCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccc
Confidence 9999999999999999999999887766 444567999999998888899999999999999999999999999999999
Q ss_pred cccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhc
Q 004722 170 KVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKA 249 (733)
Q Consensus 170 ~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~ 249 (733)
+++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+|
T Consensus 157 ~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~ 236 (688)
T TIGR00794 157 EIVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEY 236 (688)
T ss_pred cccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHC
Confidence 99999997779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCcccccccccchHHHH
Q 004722 250 GKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVF 329 (733)
Q Consensus 250 ~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ 329 (733)
|..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+|||||+++||++.+||||+++|+|++||++
T Consensus 237 ~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~ 316 (688)
T TIGR00794 237 GTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLF 316 (688)
T ss_pred CCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchhhhhhhcce
Q 004722 330 IIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLA 409 (733)
Q Consensus 330 ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGia 409 (733)
+|||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+|
T Consensus 317 vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGia 396 (688)
T TIGR00794 317 IIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIA 396 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhhhhHHhhhh
Q 004722 410 VITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSY 489 (733)
Q Consensus 410 V~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~ 489 (733)
|++||+|||+|++++|+.+|||+++++++++++|+.+|+.||+||+.|++||||+||++|++++++|++|+|||++++++
T Consensus 397 Vt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~ 476 (688)
T TIGR00794 397 VTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRR 476 (688)
T ss_pred hhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCcChHHHHhhccCCC-CccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCceEEEEEe
Q 004722 490 ESHNKVCLDMLLTVGQNHG-VTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRI 568 (733)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~-~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~eeR~~v~~l 568 (733)
++++++|++++.+.+.+.. ..|+||+|+|+|+.++++|+++.||++|||++||++||+||+++|+||||++||++++++
T Consensus 477 ~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l 556 (688)
T TIGR00794 477 DHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQV 556 (688)
T ss_pred HhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEE
Confidence 9999999999988655444 479999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccCCCCCCcCCCccccccCCCCCc
Q 004722 569 GPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNGGGA 648 (733)
Q Consensus 569 ~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (733)
++++ |+|||++||||||+||+|++|+++++++|++||+++..+.. .++++ .
T Consensus 557 ~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~-~~~~~---------------------------~ 607 (688)
T TIGR00794 557 GPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNL-NNLEE---------------------------L 607 (688)
T ss_pred cCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcc-ccccc---------------------------c
Confidence 9744 89999999999999999999999999999999998653210 00000 0
Q ss_pred cccceeeccCCCchhhhHHHHHHHhcCcEEEEeceEEEecCCCchhHHHhHHHHHHHHHhhccCccccccCCCCCEEEEe
Q 004722 649 MQKKVRFRGVGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVG 728 (733)
Q Consensus 649 ~~~~~~~~~~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~~~S~~~krl~in~vF~fLrrN~r~~~~~f~IP~~rvVEVG 728 (733)
.. .+++. +.+||+++++++.++|++||+||+++++++++++.||+.||++|+||+||||+++++|+||+||++|+|
T Consensus 608 ~~--~~~~~--~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG 683 (688)
T TIGR00794 608 SD--KRCRM--PIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVG 683 (688)
T ss_pred cc--ccccc--chHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEe
Confidence 00 00111 146888899999999999999999999999999999999899999999999999999999999999999
Q ss_pred eEEEC
Q 004722 729 MVYRV 733 (733)
Q Consensus 729 ~~yei 733 (733)
++|||
T Consensus 684 ~~~~i 688 (688)
T TIGR00794 684 TVVEI 688 (688)
T ss_pred eEEEC
Confidence 99997
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=9.5e-217 Score=1803.21 Aligned_cols=610 Identities=32% Similarity=0.616 Sum_probs=584.8
Q ss_pred HHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchHHHHHHH
Q 004722 8 LCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSI 87 (733)
Q Consensus 8 ~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~~AL~sL 87 (733)
..++++|||||||||||||||++|++|+++++.++++|||+|++||||||||++||+|||+++|||||||||||||||||
T Consensus 10 ~~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL 89 (622)
T PRK10745 10 PAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSL 89 (622)
T ss_pred HHHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHH
Confidence 35899999999999999999999999977666678999999999999999999999999999999999999999999999
Q ss_pred HhhhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchhhhhhhc
Q 004722 88 LCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAIN 167 (733)
Q Consensus 88 ~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVlSAVe 167 (733)
++|+.+ ++.|.+++++|++|+||++|||+||||||||||||
T Consensus 90 ~~~~~~---------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVE 130 (622)
T PRK10745 90 AGRNTS---------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIE 130 (622)
T ss_pred Hhhhcc---------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhh
Confidence 977532 23455788999999999999999999999999999
Q ss_pred cccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHH
Q 004722 168 GIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 247 (733)
Q Consensus 168 Gl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~ 247 (733)
||++..|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+ ||+||+|+||+||++||.
T Consensus 131 GL~v~~p~l~~-~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~ 208 (622)
T PRK10745 131 GLEIVAPQLDT-YIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFL 208 (622)
T ss_pred cccccCCCCCC-ccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHH
Confidence 99999999966 9999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred hcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCcccccccccchHH
Q 004722 248 KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWP 327 (733)
Q Consensus 248 ~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p 327 (733)
+||..||.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||++++||++.+||||+++|+|++||
T Consensus 209 ~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p 288 (622)
T PRK10745 209 EYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIP 288 (622)
T ss_pred hCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchhhhhhhc
Q 004722 328 VFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYG 407 (733)
Q Consensus 328 ~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYG 407 (733)
+++|||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||
T Consensus 289 ~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYG 368 (622)
T PRK10745 289 LLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYG 368 (622)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhhhhHHhh
Q 004722 408 LAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 487 (733)
Q Consensus 408 iaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~ 487 (733)
+|||+||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|+||++||++++
T Consensus 369 iAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~ 448 (622)
T PRK10745 369 IAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLL 448 (622)
T ss_pred hhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCceEEEEE
Q 004722 488 SYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSR 567 (733)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~eeR~~v~~ 567 (733)
++++++++|+++|++.+++.++.|+||+|+|+|+.++++|+++.||+||||++||++||+||+++|+|||+++||+++++
T Consensus 449 ~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~ 528 (622)
T PRK10745 449 RRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQ 528 (622)
T ss_pred HHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEE
Confidence 99999999999999988777777999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccCCCCCCcCCCccccccCCCCC
Q 004722 568 IGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNGGG 647 (733)
Q Consensus 568 l~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (733)
+++ |+|||++||||||+||+|+.+++
T Consensus 529 l~~---g~~rv~~~yGf~e~~~i~~~L~~--------------------------------------------------- 554 (622)
T PRK10745 529 LSP---TFWRVVASYGWRETPNVEEVFHR--------------------------------------------------- 554 (622)
T ss_pred ECC---CEEEEEEEecCCCCCCHHHHHHH---------------------------------------------------
Confidence 997 79999999999999999999985
Q ss_pred ccccceeeccCCCchhhhHHHHHHHhcCcEEEEeceEEEecCCCc---hhHHHhHHHHHHHHHhhccCccccccCCCCCE
Q 004722 648 AMQKKVRFRGVGCNNRELEELEEARESGLAYMMGNTCVLASETSS---YLKKFVINIVYGFLRRNCRRPATALGVPNASL 724 (733)
Q Consensus 648 ~~~~~~~~~~~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~~~S~---~~krl~in~vF~fLrrN~r~~~~~f~IP~~rv 724 (733)
|++++.+++++ +++||+||++++++++++ |+|| +|+||+||+++++++|++|+|||
T Consensus 555 ~~~~g~~~~~~----------------~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rv 613 (622)
T PRK10745 555 CGLEGLSCRMM----------------ETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRV 613 (622)
T ss_pred HHhCCCCCCcc----------------ceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccE
Confidence 22234445443 899999999999887776 6666 89999999999999999999999
Q ss_pred EEEeeEEEC
Q 004722 725 IEVGMVYRV 733 (733)
Q Consensus 725 VEVG~~yei 733 (733)
||+|+++|+
T Consensus 614 velG~~v~i 622 (622)
T PRK10745 614 IELGTQVEI 622 (622)
T ss_pred EEEeeEEeC
Confidence 999999996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-209 Score=1698.17 Aligned_cols=611 Identities=36% Similarity=0.680 Sum_probs=593.9
Q ss_pred HHHHHHHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchHHHHH
Q 004722 6 TTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALY 85 (733)
Q Consensus 6 ~~~~la~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~~AL~ 85 (733)
.+..++++|+|||||||||||||+++|+|.+..+...++++|+|++||||||||+|||+|||+++|||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 45679999999999999999999999999987766789999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchhhhhh
Q 004722 86 SILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSA 165 (733)
Q Consensus 86 sL~~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVlSA 165 (733)
+|++|..+ +...++.++|++|+|+|+|||+||||||||||
T Consensus 94 aL~~~~~~----------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSA 133 (627)
T COG3158 94 ALARRAAP----------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSA 133 (627)
T ss_pred HHHHhhcC----------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHH
Confidence 99988642 45668899999999999999999999999999
Q ss_pred hccccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHH
Q 004722 166 INGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIF 245 (733)
Q Consensus 166 VeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f 245 (733)
||||++++|.+++ +|+|||++||++||++||+||++||++|||||++||+++|++|++||.+ ||+||+|+||+||++|
T Consensus 134 vEGL~iv~p~~~~-~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~f 211 (627)
T COG3158 134 VEGLEIVTPALDP-YVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHF 211 (627)
T ss_pred hccccccCccccC-ccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHH
Confidence 9999999999986 9999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHhcCcceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCcccccccccch
Q 004722 246 FKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVF 325 (733)
Q Consensus 246 ~~~~~~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P~~~~ 325 (733)
+.++|..||++||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++
T Consensus 212 l~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~al 291 (627)
T COG3158 212 LLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWAL 291 (627)
T ss_pred HHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchhhhhh
Q 004722 326 WPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANA 405 (733)
Q Consensus 326 ~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~l~~A 405 (733)
+|+++|||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|+++++.++++||+|++||+|
T Consensus 292 iP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaA 371 (627)
T COG3158 292 IPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAA 371 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhhhhHH
Q 004722 406 YGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLK 485 (733)
Q Consensus 406 YGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~ 485 (733)
||+|||+||+|||+|+++++++.|||+++.+.++.++|+++|..||+||+.|++||||+|+++|++++++|+||++|+++
T Consensus 372 YGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~ 451 (627)
T COG3158 372 YGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQI 451 (627)
T ss_pred hChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCceEEE
Q 004722 486 KHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHV 565 (733)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~eeR~~v 565 (733)
++++.+++++|++.+++.++++++.|+||||+|+|+..+.+|.+++||+|||+++||+|||+||+++|+|||+++||+++
T Consensus 452 l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~v 531 (627)
T COG3158 452 LFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKV 531 (627)
T ss_pred HHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCccEEEEEEEEeeecccccHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccCCCCCCcCCCccccccCCC
Q 004722 566 SRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNG 645 (733)
Q Consensus 566 ~~l~~~~~g~yRv~lryGYme~p~vp~~l~~~li~~L~~fI~~e~~~~~~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (733)
+++++ +++|++++|||||+||+|+.+..
T Consensus 532 e~l~~---~f~rV~l~~Gfme~pnvp~~l~~------------------------------------------------- 559 (627)
T COG3158 532 EQLSD---DFVRVVLHFGFMETPNVPRALRL------------------------------------------------- 559 (627)
T ss_pred eeccC---ceEEEEEEeeccCCCCHHHHHHH-------------------------------------------------
Confidence 99998 79999999999999999999986
Q ss_pred CCccccceeeccCCCchhhhHHHHHHHhcCcEEEEeceEEEecCCCc---hhHHHhHHHHHHHHHhhccCccccccCCCC
Q 004722 646 GGAMQKKVRFRGVGCNNRELEELEEARESGLAYMMGNTCVLASETSS---YLKKFVINIVYGFLRRNCRRPATALGVPNA 722 (733)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~El~~l~~a~~~~v~YfLGr~~l~a~~~S~---~~krl~in~vF~fLrrN~r~~~~~f~IP~~ 722 (733)
|+++|.+++++ +++||+||++++++++++ |+.| +|++|.||+.+++++|+||+|
T Consensus 560 --~~~~G~~f~im----------------~tsFfl~re~l~~~~~~g~~~w~~~-----lfi~l~r~aa~~~~~F~lp~~ 616 (627)
T COG3158 560 --CRKKGLKFDIM----------------ETSFFLSRESLIASKNSGMPRWRDR-----LFIALARNAASPTDYFKLPPN 616 (627)
T ss_pred --HhhcCceeccc----------------ceEEEEEeeeeecCCCCCchHHHHH-----HHHHHHHhcCCHHHhhCCCCC
Confidence 66678888876 899999999999999987 4445 899999999999999999999
Q ss_pred CEEEEeeEEEC
Q 004722 723 SLIEVGMVYRV 733 (733)
Q Consensus 723 rvVEVG~~yei 733 (733)
||||+|.+.||
T Consensus 617 rvvElGtqveI 627 (627)
T COG3158 617 RVVELGTQVEI 627 (627)
T ss_pred cEEEeeeeeeC
Confidence 99999999986
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=5.3e-199 Score=1648.56 Aligned_cols=534 Identities=45% Similarity=0.857 Sum_probs=521.1
Q ss_pred HHhhcceeecccCcchhhhhhhccCCCCCCCCCccchhhhHHHHHHHHHHhhhhheeeEEEeecCCCCchHHHHHHHHhh
Q 004722 11 AYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCR 90 (733)
Q Consensus 11 a~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~~~~v~G~lSlIfWtL~liv~iKYv~ivl~Adn~GEGG~~AL~sL~~r 90 (733)
|++|||||||||||||||+|+++| ++.+.++++|||+|++||||||||++|++|||+++|||||||||||||||||+||
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f-~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~ 79 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIF-GSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRR 79 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHH-hhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHH
Confidence 589999999999999999999999 4455678999999999999999999999999999999999999999999999986
Q ss_pred hccccccCCCCCCCCcccccccCCCcccccchhhhHHhhhcCcchHHHHHHHHHHhhhhhhcCcccccchhhhhhhcccc
Q 004722 91 RAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIK 170 (733)
Q Consensus 91 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVlSAVeGl~ 170 (733)
.. |++++.++.++++|++|+||++|||+||||||||||||||+
T Consensus 80 ~~-------------------------------------~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~ 122 (534)
T PF02705_consen 80 FL-------------------------------------KSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLE 122 (534)
T ss_pred hh-------------------------------------ccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhh
Confidence 43 24556677779999999999999999999999999999999
Q ss_pred ccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhcC
Q 004722 171 VKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAG 250 (733)
Q Consensus 171 v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~~ 250 (733)
+.+|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+ +|+||+|+||+||++||.+||
T Consensus 123 v~~p~~~~-~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~ 200 (534)
T PF02705_consen 123 VATPSLEP-YVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNG 200 (534)
T ss_pred ccCCCCcc-eehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcC
Confidence 99999985 9999999999999999999999999999999999999999999999999 699999999999999999999
Q ss_pred cceeeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcCcccCcccccccccchHHHHH
Q 004722 251 KDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFI 330 (733)
Q Consensus 251 ~~~~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~i 330 (733)
..||.+||+|+||+||+||||||||||||||||+||+++|||||+|||+||||++++||++.+||||+++|+|++||+++
T Consensus 201 ~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~i 280 (534)
T PF02705_consen 201 WIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVI 280 (534)
T ss_pred CchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchhhhhhhccee
Q 004722 331 IATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAV 410 (733)
Q Consensus 331 lAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV 410 (733)
+||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||
T Consensus 281 lAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAV 360 (534)
T PF02705_consen 281 LATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAV 360 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHhhhhhhhhhhHHhhhhh
Q 004722 411 ITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYE 490 (733)
Q Consensus 411 ~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~ 490 (733)
++||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+||++|++++++|++|++||+++++++
T Consensus 361 t~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~ 440 (534)
T PF02705_consen 361 TGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFE 440 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCcChHHHHhhccCCCCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEeeeecccccCCCceEEEEEecC
Q 004722 491 SHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGP 570 (733)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~iP~~~~h~l~~~~~lhe~~VfltV~~~~vP~V~~eeR~~v~~l~~ 570 (733)
++++++++++.++.++.+++|+||+|+|+|+.++++|+++.||++||+++||+++|++++++|+|+||++||++++++++
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~ 520 (534)
T PF02705_consen 441 RENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP 520 (534)
T ss_pred HhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCccEEEEEEEEeeec
Q 004722 571 QEFHFFHCIVRYGYKD 586 (733)
Q Consensus 571 ~~~g~yRv~lryGYme 586 (733)
+ |+|||++||||||
T Consensus 521 ~--g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 D--GFYRVTLRYGFME 534 (534)
T ss_pred C--CEEEEEEEecCCC
Confidence 3 8999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.65 E-value=0.27 Score=56.42 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=49.0
Q ss_pred eehHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhcCcceee-ee
Q 004722 182 VLIASLMLVGLFALQHFGTHRVGF---LFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWS-SL 257 (733)
Q Consensus 182 v~is~~ILv~LF~iQ~~GT~kvg~---~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~-~L 257 (733)
..+++++++++..+.-+|....++ .+.-+.++=++.+.+.|++.+.+-++. ..+|...+.-. .++..+|. .+
T Consensus 166 ~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a~ 241 (501)
T TIGR00911 166 RLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLAF 241 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHHH
Confidence 457788888899999999766554 333333322233344555544321111 11222111000 01122332 45
Q ss_pred cchhhhhcchhhhhcCCC--CCCCcceeehh
Q 004722 258 GGVVLCVTGAEAMFADLG--HFSHLPIRIAF 286 (733)
Q Consensus 258 G~v~L~iTG~EALyADmG--HFg~~~Ir~aw 286 (733)
..++.+.+|-|+.=.--| +-.+|.|..|-
T Consensus 242 ~~~~~af~G~e~~~~~a~E~knP~r~iPrAi 272 (501)
T TIGR00911 242 YSGIWAYGGWNYLNFVTEEVKNPYRTLPIAI 272 (501)
T ss_pred HHHHHHHHhHHHHhhhHHHhcCchhhhHHHH
Confidence 667788888886533222 23345555543
No 10
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=88.42 E-value=1.1 Score=49.72 Aligned_cols=253 Identities=15% Similarity=0.122 Sum_probs=133.1
Q ss_pred Ccccccchhhhhhhcccccc-ccCCCCc--eEeehHHHHHHHHHHHhhhcccccccc---hhhHHH-HHHHHHHhhhhhh
Q 004722 153 DGILTPAMSVLSAINGIKVK-ATGLDEN--YTVLIASLMLVGLFALQHFGTHRVGFL---FAPVLL-AWLLCISIVGFYN 225 (733)
Q Consensus 153 DgviTPAiSVlSAVeGl~v~-~p~~~~~--~vv~is~~ILv~LF~iQ~~GT~kvg~~---FgPiml-~Wf~~l~~~Gi~~ 225 (733)
+-+.+.++...++.+-+... .|++.++ ....+++++++....+.-+|....+++ .+=+.+ .-++.+.+.|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~ 166 (426)
T PF13520_consen 87 AYILSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVS 166 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeeccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEee
Confidence 33444444555555555443 2443221 244577888888899999998766653 333333 4555566667765
Q ss_pred cccCCcce-----eeecCHHHHHHHHHhcCcce-eeeecchhhhhcchhhhhcCCCCCCCcceeehhhhhHhHHHHHhhc
Q 004722 226 TVRWNPGV-----VRALSPYYVYIFFKKAGKDG-WSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYM 299 (733)
Q Consensus 226 i~~~~p~V-----l~AlnP~ya~~f~~~~~~~~-~~~LG~v~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~ 299 (733)
..+ +..- ....+|. +..+ +..+...+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+
T Consensus 167 ~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l 236 (426)
T PF13520_consen 167 FSF-SGFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYIL 236 (426)
T ss_dssp TTC-CHHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecc-cccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhh
Confidence 543 1111 1112221 1111 3445667888899888655444455567766655433333332222
Q ss_pred ccchhhccCcC-c---ccC------cccccc-cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEec
Q 004722 300 GEAAFYTKHKE-D---LER------SFFKAI-PEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHT 368 (733)
Q Consensus 300 GQgA~ll~~p~-~---~~n------pFf~~~-P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hT 368 (733)
..-++...-|. . .+| .+++.. .++..+.+.+.+.+++.-+-.+.+.+.--++.+.-+-|.+|+ +..++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~ 315 (426)
T PF13520_consen 237 FSIALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKV 315 (426)
T ss_dssp HHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTT
T ss_pred hhheeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhc
Confidence 22233332221 1 112 222222 467778888888787777666666666667777888899994 22222
Q ss_pred CCcccCceeehhhHHHHHHHhh-eeE--EEe---cCchhhhhhhcceehhHHHHHHHHH
Q 004722 369 SNQIHGQIYIPEMNWILMIFCL-GVV--VGF---RDTDMIANAYGLAVITVMFVTTCLM 421 (733)
Q Consensus 369 S~~~~GQIYiP~vNw~L~i~~i-~vv--~~F---~~s~~l~~AYGiaV~~~m~iTT~L~ 421 (733)
+ .+| .|..-.++...+. ++. ..| ++.+.+.+.+.+......+++.+-.
T Consensus 316 ~--k~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 369 (426)
T PF13520_consen 316 N--KFG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVILAV 369 (426)
T ss_dssp S--SSS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred c--ccC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 122 2555444443333 222 223 2335667766666666666664433
No 11
>TIGR00930 2a30 K-Cl cotransporter.
Probab=80.43 E-value=34 Score=43.26 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=18.4
Q ss_pred EeehHHHHHHHHHHHhhhccccccc
Q 004722 181 TVLIASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 181 vv~is~~ILv~LF~iQ~~GT~kvg~ 205 (733)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3456778888888888899865544
No 12
>TIGR00909 2A0306 amino acid transporter.
Probab=78.57 E-value=13 Score=41.48 Aligned_cols=207 Identities=16% Similarity=0.108 Sum_probs=96.0
Q ss_pred ehHHHHHHHHHHHhhhcccccc---cchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhcCccee-eeec
Q 004722 183 LIASLMLVGLFALQHFGTHRVG---FLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGW-SSLG 258 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~kvg---~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~-~~LG 258 (733)
.++++++++...+..+|....+ ..++.+.++=++.+.+.|+.+. ++.-+..+.|. +..++ ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 3567778888889999976655 4666666654544455555433 22222222221 11121 1233
Q ss_pred chhhhhcchhhhhc--CCCCCCCcceeehhhhhHhHHHHHhhcccchhhccC-c-C---cccCccc----ccccccchHH
Q 004722 259 GVVLCVTGAEAMFA--DLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKH-K-E---DLERSFF----KAIPEAVFWP 327 (733)
Q Consensus 259 ~v~L~iTG~EALyA--DmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~-p-~---~~~npFf----~~~P~~~~~p 327 (733)
..+.+.+|=|+.-. +-=+-.+|.+..|-..-+.-+.+ .|+.-....... | + ..++|+. +...++..+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~v-~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVTL-LYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHHH-HHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45667778887643 33344566777766542222222 244333222211 1 1 1223432 2223444444
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeEEEecCchhhhhhhc
Q 004722 328 VFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYG 407 (733)
Q Consensus 328 ~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYG 407 (733)
+.+.+.++..-+..+.+.+.==+...+-+.|.+|+. .-++++| +| .|..--++..+...+...+.+.+.+.+..+
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~-~~---~P~~a~~~~~~i~~~~~~~~~~~~l~~~~~ 356 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPK-TG---TPHMSIIIFSLTAALLASLVPLEGLAELTS 356 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCC-CC---CcHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 444444444444444444433344445578999972 1222222 12 575533333322222233445555554443
No 13
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=78.34 E-value=17 Score=40.60 Aligned_cols=177 Identities=16% Similarity=0.112 Sum_probs=98.9
Q ss_pred eEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhcCc--ceeeee
Q 004722 180 YTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGK--DGWSSL 257 (733)
Q Consensus 180 ~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~~~--~~~~~L 257 (733)
....++.+++++++.++-+|....++...-..++=+..+..+++..+...+......+++... ..+. .-...+
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 207 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP-----GGGSFGGILAAI 207 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc-----ccchHHHHHHHH
Confidence 467789999999999999999988876655555444444444444444422222222221110 0000 123345
Q ss_pred cchhhhhcchhhh--hcC-CCCCCCcceeehhhhhHhHHHHHhhcccchhhccCcC-ccc-----Ccccc---ccc-ccc
Q 004722 258 GGVVLCVTGAEAM--FAD-LGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKE-DLE-----RSFFK---AIP-EAV 324 (733)
Q Consensus 258 G~v~L~iTG~EAL--yAD-mGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~-~~~-----npFf~---~~P-~~~ 324 (733)
+.++.+.+|-|+. +|+ +=+ .+|.|-.+-..-..-+.++-.+++-+....-|. +.. +|+.. ... .+.
T Consensus 208 ~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 286 (466)
T COG0531 208 LLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWG 286 (466)
T ss_pred HHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHH
Confidence 6668889998865 332 434 556666666554433433333333333333332 111 45442 223 356
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcc
Q 004722 325 FWPVFIIATLATAVASQAIISATFSIISQCRALSCFPR 362 (733)
Q Consensus 325 ~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 362 (733)
.+-+.+++.+++.-+..+.+.+.--...+.-+-|++|+
T Consensus 287 ~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 287 AIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 66666666666666666666666666777778999998
No 14
>PRK15049 L-asparagine permease; Provisional
Probab=75.06 E-value=21 Score=41.47 Aligned_cols=22 Identities=14% Similarity=0.027 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhhhccccccc
Q 004722 184 IASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 184 is~~ILv~LF~iQ~~GT~kvg~ 205 (733)
++.++++++..+.-+|....++
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4677778888899999776665
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=72.91 E-value=52 Score=37.20 Aligned_cols=23 Identities=13% Similarity=0.060 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHhhhcccccccc
Q 004722 184 IASLMLVGLFALQHFGTHRVGFL 206 (733)
Q Consensus 184 is~~ILv~LF~iQ~~GT~kvg~~ 206 (733)
++++++.++..+..+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999999877664
No 16
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=70.02 E-value=31 Score=39.46 Aligned_cols=25 Identities=8% Similarity=-0.126 Sum_probs=18.1
Q ss_pred eehHHHHHHHHHHHhhhcccccccc
Q 004722 182 VLIASLMLVGLFALQHFGTHRVGFL 206 (733)
Q Consensus 182 v~is~~ILv~LF~iQ~~GT~kvg~~ 206 (733)
..+.+++++++..+.-+|....++.
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 4566777888888999987655443
No 17
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=69.65 E-value=44 Score=38.24 Aligned_cols=45 Identities=13% Similarity=0.120 Sum_probs=24.2
Q ss_pred ecchhhhhcchhhh--hcCCCCCCCcceeehhhhhHhHHHHHhhccc
Q 004722 257 LGGVVLCVTGAEAM--FADLGHFSHLPIRIAFATVVYPCLILAYMGE 301 (733)
Q Consensus 257 LG~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~LilnY~GQ 301 (733)
.++++.+.+|-|.. +|+-=+--+|.+-.|-..-+.-+.++-.+++
T Consensus 200 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~ 246 (474)
T TIGR03813 200 AASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGT 246 (474)
T ss_pred HHHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHH
Confidence 34456788888853 4444345566666665554433333333333
No 18
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=64.67 E-value=79 Score=36.13 Aligned_cols=45 Identities=9% Similarity=-0.181 Sum_probs=28.9
Q ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcce
Q 004722 319 AIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRV 363 (733)
Q Consensus 319 ~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 363 (733)
...+|..+.+.+.+.++++-+..+.+.+.=-+..++-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 334555555555555555555666666666666777789999964
No 19
>PRK10655 potE putrescine transporter; Provisional
Probab=57.79 E-value=96 Score=34.93 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=25.2
Q ss_pred ehHHHHHHHHHHHhhhcccccccc---hhhHHHHHHHHHHhhhhhh
Q 004722 183 LIASLMLVGLFALQHFGTHRVGFL---FAPVLLAWLLCISIVGFYN 225 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~kvg~~---FgPiml~Wf~~l~~~Gi~~ 225 (733)
.+++++++.+..+.-+|+...+++ ..-.+++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999997766653 3333334444444555443
No 20
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=57.72 E-value=61 Score=36.52 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=17.6
Q ss_pred ehHHHHHHHHHHHhhhcccccccc
Q 004722 183 LIASLMLVGLFALQHFGTHRVGFL 206 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~kvg~~ 206 (733)
.+++++++++..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 356666777788888898777764
No 21
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=51.00 E-value=64 Score=36.47 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=47.9
Q ss_pred ehHHHHHHHHHHHhhhccc---ccccchhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHHHHhcCccee-----
Q 004722 183 LIASLMLVGLFALQHFGTH---RVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGW----- 254 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~---kvg~~FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~----- 254 (733)
.+++++++++..+.-+|.+ |+...+.=+.++=++.+.+.|++.... +-+..-.|.. .+..|+
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~~~---~~~~~~~~~~-------~~~~g~~~~~~ 198 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKA---ENFAAPTTTA-------IGATGSFMALL 198 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---ccccCCCccc-------ccccchHHHHH
Confidence 4566667777788989875 444444433444444455556654322 1111100100 011111
Q ss_pred eeecchhhhhcchhhh--hcCCCCCCCcceeehhhhhH
Q 004722 255 SSLGGVVLCVTGAEAM--FADLGHFSHLPIRIAFATVV 290 (733)
Q Consensus 255 ~~LG~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V 290 (733)
..+...+.+.+|-|+. +|+=-+-.+|.|-.|-..-+
T Consensus 199 ~~~~~~~~af~G~e~~~~~a~E~k~P~r~iP~Ai~~~~ 236 (445)
T PRK11357 199 AGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSC 236 (445)
T ss_pred HHHHHHHHHHhhHHHHHhhHHHhcCccccchHHHHHHH
Confidence 1133456777887754 34434555666666554433
No 22
>PRK10249 phenylalanine transporter; Provisional
Probab=49.80 E-value=1.1e+02 Score=34.82 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHhhhcccccccc---hhhHHHHHHHHHHhhhhhhcccCCcceeeecCHHHHHHH--HHhcCcce-eeee
Q 004722 184 IASLMLVGLFALQHFGTHRVGFL---FAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIF--FKKAGKDG-WSSL 257 (733)
Q Consensus 184 is~~ILv~LF~iQ~~GT~kvg~~---FgPiml~Wf~~l~~~Gi~~i~~~~p~Vl~AlnP~ya~~f--~~~~~~~~-~~~L 257 (733)
++.++++++..+.-+|....+++ +.=+.++..+.+.++|+.-+...++.- ..++.+.... +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 46677777788888888766653 333334444555555555433212110 1111110000 00122233 2345
Q ss_pred cchhhhhcchhhh--hcCCCCCCCcceeehhhh
Q 004722 258 GGVVLCVTGAEAM--FADLGHFSHLPIRIAFAT 288 (733)
Q Consensus 258 G~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~ 288 (733)
..++.+.+|-|.. .|+=-+-.+|.|-.|-..
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~ 248 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ 248 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH
Confidence 5567788898865 666556677777666544
No 23
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=49.71 E-value=2.1e+02 Score=33.97 Aligned_cols=44 Identities=25% Similarity=0.452 Sum_probs=27.2
Q ss_pred eehHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhh
Q 004722 182 VLIASLMLVGLFALQHFGTHRVGF---LFAPVLLAWLLCISIVGFYN 225 (733)
Q Consensus 182 v~is~~ILv~LF~iQ~~GT~kvg~---~FgPiml~Wf~~l~~~Gi~~ 225 (733)
..+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 162 ~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred hHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 446777777788888899776665 44444444444455556543
No 24
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=48.53 E-value=2.2e+02 Score=33.23 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=24.1
Q ss_pred chhhhhcchhhh--hcCCCCCCCcceeehhhhhHhHHHHHhhcc
Q 004722 259 GVVLCVTGAEAM--FADLGHFSHLPIRIAFATVVYPCLILAYMG 300 (733)
Q Consensus 259 ~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~LilnY~G 300 (733)
+++.+.+|-|+. .|+==+--+|.+-.|-...+.-+.++.++|
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~ 245 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIG 245 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHH
Confidence 345567898865 555445566666666555444444444443
No 25
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=46.78 E-value=54 Score=33.70 Aligned_cols=21 Identities=5% Similarity=0.381 Sum_probs=17.2
Q ss_pred CccHHHHHHHHHHhhhhhhhh
Q 004722 461 GGWLPLVFSLVTLSIMCIWQY 481 (733)
Q Consensus 461 GGW~pl~ia~i~~~iM~~W~~ 481 (733)
.+|.-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999988766654
No 26
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=46.56 E-value=17 Score=38.23 Aligned_cols=30 Identities=30% Similarity=0.665 Sum_probs=26.2
Q ss_pred ccCccHHHHHHHHHHhhhhhhhhhhHHhhh
Q 004722 459 HKGGWLPLVFSLVTLSIMCIWQYGTLKKHS 488 (733)
Q Consensus 459 ~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~ 488 (733)
.+|||..+++++++..+...|+|.-+.+.+
T Consensus 259 i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 259 IQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred cccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 489999999999999999999997766644
No 27
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=44.37 E-value=96 Score=33.52 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=35.8
Q ss_pred hhhhhhhcceehhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 004722 400 DMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSL 446 (733)
Q Consensus 400 ~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~i 446 (733)
.+-=..||-+|-.|.++.++-+++.+..+.+.+.+.++++.++++.+
T Consensus 12 r~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~ 58 (301)
T PF14362_consen 12 RNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLV 58 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 33445788889999999998888888888998877776666665543
No 28
>PRK11021 putative transporter; Provisional
Probab=44.20 E-value=3.5e+02 Score=30.16 Aligned_cols=27 Identities=26% Similarity=0.191 Sum_probs=21.2
Q ss_pred EeehHHHHHHHHHHHhhhcccccccch
Q 004722 181 TVLIASLMLVGLFALQHFGTHRVGFLF 207 (733)
Q Consensus 181 vv~is~~ILv~LF~iQ~~GT~kvg~~F 207 (733)
...+++++++++..+.-+|.+..+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 346778888888999999988877643
No 29
>PRK10238 aromatic amino acid transporter; Provisional
Probab=43.05 E-value=1e+02 Score=35.20 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhccc--CCcc-eeeecCHHHHHHHHHhcCccee-ee
Q 004722 184 IASLMLVGLFALQHFGTHRVGF---LFAPVLLAWLLCISIVGFYNTVR--WNPG-VVRALSPYYVYIFFKKAGKDGW-SS 256 (733)
Q Consensus 184 is~~ILv~LF~iQ~~GT~kvg~---~FgPiml~Wf~~l~~~Gi~~i~~--~~p~-Vl~AlnP~ya~~f~~~~~~~~~-~~ 256 (733)
.+++++++++.+.-+|+...++ .+.-+-++-++.+-++|+.-+.. ..|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888889876655 23333333333333334332221 0121 11110000 00001121221 23
Q ss_pred ecchhhhhcchhh--hhcCCCCCCCcceeehhhhhHhHHHHHhhcc
Q 004722 257 LGGVVLCVTGAEA--MFADLGHFSHLPIRIAFATVVYPCLILAYMG 300 (733)
Q Consensus 257 LG~v~L~iTG~EA--LyADmGHFg~~~Ir~aw~~~V~P~LilnY~G 300 (733)
++.++.+.+|-|. ..|+=-+-.+|++-.|-.. +...+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4556778889887 4455456677778777643 33444455654
No 30
>PRK10580 proY putative proline-specific permease; Provisional
Probab=42.13 E-value=1.7e+02 Score=33.32 Aligned_cols=100 Identities=19% Similarity=0.156 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhc---cc--CCcceee-ecCHHHHHHHHHhcCccee-
Q 004722 185 ASLMLVGLFALQHFGTHRVGF---LFAPVLLAWLLCISIVGFYNT---VR--WNPGVVR-ALSPYYVYIFFKKAGKDGW- 254 (733)
Q Consensus 185 s~~ILv~LF~iQ~~GT~kvg~---~FgPiml~Wf~~l~~~Gi~~i---~~--~~p~Vl~-AlnP~ya~~f~~~~~~~~~- 254 (733)
.++++++++.++-+|....++ .+.-+.++-++.+.++|+.-+ .. .+|.-.+ .+++- .++ .++..|+
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~~~ 202 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGGQPTGIHNLWSNG---GFF-SNGWLGMV 202 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccCCCC---CCC-CcchHHHH
Confidence 555566778899999765555 455554444444444443211 11 0111110 00000 000 1122121
Q ss_pred eeecchhhhhcchhhh--hcCCCCCCCcceeehhhh
Q 004722 255 SSLGGVVLCVTGAEAM--FADLGHFSHLPIRIAFAT 288 (733)
Q Consensus 255 ~~LG~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~ 288 (733)
..+..++.+.+|-|+. .|.=-+-.+|+|..|-..
T Consensus 203 ~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~~ 238 (457)
T PRK10580 203 MSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINS 238 (457)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHHH
Confidence 2344567778888865 344446666667676543
No 31
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=40.43 E-value=1.5e+02 Score=33.61 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHhhhccccccc
Q 004722 184 IASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 184 is~~ILv~LF~iQ~~GT~kvg~ 205 (733)
+.+++++++..+.-+|+...++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHH
Confidence 4566666778888989876665
No 32
>PRK10746 putative transport protein YifK; Provisional
Probab=39.13 E-value=2.1e+02 Score=32.75 Aligned_cols=26 Identities=8% Similarity=-0.028 Sum_probs=16.4
Q ss_pred ccHHHHHHHHHHhhhhhhhhhhHHhh
Q 004722 462 GWLPLVFSLVTLSIMCIWQYGTLKKH 487 (733)
Q Consensus 462 GW~pl~ia~i~~~iM~~W~~G~~~~~ 487 (733)
.......+.+++.++..++...+.-+
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~ 452 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNR 452 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34577777777777777666554433
No 33
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=39.02 E-value=1.3e+02 Score=34.53 Aligned_cols=23 Identities=30% Similarity=0.262 Sum_probs=16.8
Q ss_pred ehHHHHHHHHHHHhhhccccccc
Q 004722 183 LIASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~kvg~ 205 (733)
.+++++++++..+.-+|....++
T Consensus 131 ~~~~~~~~~~~~ln~~Gi~~~~~ 153 (473)
T TIGR00905 131 LGASVLLWVFTFLVLRGVRQAAF 153 (473)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHH
Confidence 34566666778899999977655
No 34
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=38.77 E-value=5.2e+02 Score=29.26 Aligned_cols=44 Identities=11% Similarity=0.125 Sum_probs=25.4
Q ss_pred ehHHHHHHHHHHHhhhcccccccchhh---HHHHHHHHHHhhhhhhc
Q 004722 183 LIASLMLVGLFALQHFGTHRVGFLFAP---VLLAWLLCISIVGFYNT 226 (733)
Q Consensus 183 ~is~~ILv~LF~iQ~~GT~kvg~~FgP---iml~Wf~~l~~~Gi~~i 226 (733)
.+++++++++..+.-+|+...+++--. +.++-++.+.++|+..+
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~ 174 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAI 174 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666777778899998777765433 22333333344455433
No 35
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=35.17 E-value=1.7e+02 Score=33.65 Aligned_cols=25 Identities=28% Similarity=0.300 Sum_probs=16.6
Q ss_pred HHHHhhhhhhhhhhHHHHHHHcCCCc
Q 004722 336 TAVASQAIISATFSIISQCRALSCFP 361 (733)
Q Consensus 336 tIIASQA~Isg~FSl~~Qai~Lg~~P 361 (733)
+.+.-||.|-| |-..--|+.+|..|
T Consensus 112 aLvqvQatvvg-fla~i~a~~lg~~p 136 (441)
T KOG3788|consen 112 ALVQVQATVVG-FLAAIAAIALGIIP 136 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhccCc
Confidence 44556666665 55555678899998
No 36
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=34.66 E-value=41 Score=38.75 Aligned_cols=86 Identities=26% Similarity=0.284 Sum_probs=56.2
Q ss_pred HcCCCcceeEEecCCcccC----ceeehhhHHHHHHHhheeEEEecCchhhhhhhcceehhHHHHHHHHHHHHHH-----
Q 004722 356 ALSCFPRVKIMHTSNQIHG----QIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIV----- 426 (733)
Q Consensus 356 ~Lg~~Pr~~i~hTS~~~~G----QIYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~----- 426 (733)
..|-.||+.+...=++..| |+|+|.+= +..+-=|-.-=|-++-++=-.++||++..|||++...=..
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 4789999999988888888 99999852 1111122223355566666889999999999998764211
Q ss_pred HHHhcchhHHHHHHHHHHH
Q 004722 427 MVWKRKVLVAIAFVVVFGS 445 (733)
Q Consensus 427 ~~w~~~~~~~~~~~~~f~~ 445 (733)
.+.-.-+.+.++|+.+|++
T Consensus 301 YVKAiDiYL~vCFvfVF~s 319 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLS 319 (459)
T ss_pred ceeeehhhhhHHHHHHHHH
Confidence 1222334455666666665
No 37
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=34.48 E-value=2.3e+02 Score=32.48 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=48.3
Q ss_pred ecchhhhhcchhhh--hcCCCCCCCcceeehhhhhHhHHHHHhhcccchhhc--cCcCc---ccCcccccc----cccch
Q 004722 257 LGGVVLCVTGAEAM--FADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYT--KHKED---LERSFFKAI----PEAVF 325 (733)
Q Consensus 257 LG~v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll--~~p~~---~~npFf~~~----P~~~~ 325 (733)
+..++.+.+|-|+. .|.==+-.+|+|..|-.. +.-...+-|.-....+. ..+++ .++||-... -++..
T Consensus 217 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 295 (469)
T PRK11049 217 FQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAA 295 (469)
T ss_pred HHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHH
Confidence 34456777788864 333335566777766642 22233333443332222 12222 235653221 12222
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCcc
Q 004722 326 WPVFIIATLATAVASQAIISATFSIISQCRALSCFPR 362 (733)
Q Consensus 326 ~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 362 (733)
.-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 296 ~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 296 SVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 2233333333333444444444444555557899996
No 38
>PRK11387 S-methylmethionine transporter; Provisional
Probab=33.23 E-value=3.4e+02 Score=31.09 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhhhccccccc
Q 004722 185 ASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 185 s~~ILv~LF~iQ~~GT~kvg~ 205 (733)
.+++++++..+.-+|....++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344455667778888776554
No 39
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=32.41 E-value=19 Score=39.12 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=25.4
Q ss_pred CCCCCCCcceeehhhhhHhHHHHHhhccc--chhhccCcCccc-Cc
Q 004722 273 DLGHFSHLPIRIAFATVVYPCLILAYMGE--AAFYTKHKEDLE-RS 315 (733)
Q Consensus 273 DmGHFg~~~Ir~aw~~~V~P~LilnY~GQ--gA~ll~~p~~~~-np 315 (733)
+=++|||.+||++|=+--=+| || |.=||+|||-+. ||
T Consensus 171 gk~Y~GRG~iQlsWNyNYG~a------g~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNYNYGAA------GKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CCcccccCcccccccccccHh------HhhcCchhhcCcchhccCc
Confidence 457999999999998722222 33 234788999765 55
No 40
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=29.54 E-value=3.5e+02 Score=30.83 Aligned_cols=29 Identities=17% Similarity=0.072 Sum_probs=17.9
Q ss_pred hhhhhcchhhh--hcCCCCCCCcceeehhhh
Q 004722 260 VVLCVTGAEAM--FADLGHFSHLPIRIAFAT 288 (733)
Q Consensus 260 v~L~iTG~EAL--yADmGHFg~~~Ir~aw~~ 288 (733)
++.+.+|-|+. .|+==+-.+|+|-.|-..
T Consensus 206 ~~~af~G~e~~~~~a~E~knP~r~iPrai~~ 236 (478)
T TIGR00913 206 AAFSFGGTELVALTAGEAANPRKSIPRAAKR 236 (478)
T ss_pred HHhhhccHHHHHHHHHhhcChhhHHHHHHHH
Confidence 45677787753 445456667777666544
No 41
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=24.65 E-value=75 Score=35.11 Aligned_cols=88 Identities=22% Similarity=0.470 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhhccccccc--chhhHHHHHHHHHHhhhhh---------------------hcccCCcceeeecCHHHH
Q 004722 186 SLMLVGLFALQHFGTHRVGF--LFAPVLLAWLLCISIVGFY---------------------NTVRWNPGVVRALSPYYV 242 (733)
Q Consensus 186 ~~ILv~LF~iQ~~GT~kvg~--~FgPiml~Wf~~l~~~Gi~---------------------~i~~~~p~Vl~AlnP~ya 242 (733)
++.+.=.|+-| +|-.++|+ +.|-+.+.|.++-...++. .++||-|+..
T Consensus 214 ~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~-------- 284 (372)
T KOG3145|consen 214 VITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAY-------- 284 (372)
T ss_pred HHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh--------
Confidence 33333344444 46777877 6777777776655444332 1233433321
Q ss_pred HHHHHhcCcceeeeecchhhhhcchhh-----------------hhcCCCCCCCcceee
Q 004722 243 YIFFKKAGKDGWSSLGGVVLCVTGAEA-----------------MFADLGHFSHLPIRI 284 (733)
Q Consensus 243 ~~f~~~~~~~~~~~LG~v~L~iTG~EA-----------------LyADmGHFg~~~Ir~ 284 (733)
.=+.|..-.|| +.|+|+|=+|||-| .|+|+|-||-.-+.+
T Consensus 285 -mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 285 -MNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred -hcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 11334445677 56999999999975 689999999654433
No 42
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=21.03 E-value=1.3e+03 Score=26.45 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=17.3
Q ss_pred eehHHHHHHHHHHHhhhccccccc
Q 004722 182 VLIASLMLVGLFALQHFGTHRVGF 205 (733)
Q Consensus 182 v~is~~ILv~LF~iQ~~GT~kvg~ 205 (733)
..++++++++...+.-+|+...++
T Consensus 145 ~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 145 VLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHH
Confidence 456666777788888899876655
No 43
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=21.00 E-value=2.5e+02 Score=31.53 Aligned_cols=140 Identities=15% Similarity=0.188 Sum_probs=82.9
Q ss_pred hhhhhhhhHHHHHHHcCC-CcceeEEecCCcccCceeehhhHHHHHHHhheeEEEec--Cc-----hhhhhhhcceehhH
Q 004722 342 AIISATFSIISQCRALSC-FPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFR--DT-----DMIANAYGLAVITV 413 (733)
Q Consensus 342 A~Isg~FSl~~Qai~Lg~-~Pr~~i~hTS~~~~GQIYiP~vNw~L~i~~i~vv~~F~--~s-----~~l~~AYGiaV~~~ 413 (733)
-+||-.|.-+.|..-+=. |||-|=+ ..|=.+.-+|+++..++-...+ .. +....---.....-
T Consensus 167 ~lis~~~l~l~qvqiv~rlF~R~~eK---------~~i~~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~ 237 (348)
T PF08733_consen 167 DLISNFFLQLAQVQIVIRLFPRQKEK---------RIIFWVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFR 237 (348)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCcE---------EEEeeHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHH
Confidence 367888888888876654 5985433 3466677777776554433222 22 11111111123334
Q ss_pred HHHHHHHHHHHHHHHHh--------cchhHHHHHHHHHHHHHHHHHHHhhhccccCcc---HHHHHHHHHHhhhhhhhhh
Q 004722 414 MFVTTCLMFLIIVMVWK--------RKVLVAIAFVVVFGSLELLYLSACLAKVHKGGW---LPLVFSLVTLSIMCIWQYG 482 (733)
Q Consensus 414 m~iTT~L~~~v~~~~w~--------~~~~~~~~~~~~f~~id~~f~~anl~Kv~~GGW---~pl~ia~i~~~iM~~W~~G 482 (733)
..+-++....+....|+ ++.+...++-++...+...||..-+.|..-=|| ++-+..++...+-+-|-+-
T Consensus 238 ial~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i~l~~vffI~dis~~~v~~w~~~~~~~~~~~~tVivWEWi~r 317 (348)
T PF08733_consen 238 IALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLILLPVVFFILDISNWWVSGWSEYFRWVLYVAATVIVWEWINR 317 (348)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHHHHHHHhheeEccchhhhhHHHHHHHHHHHHHhhhHHHhhhH
Confidence 44555555555555554 344555667777777889999999999888888 5666666666665555554
Q ss_pred hHHhhhhh
Q 004722 483 TLKKHSYE 490 (733)
Q Consensus 483 ~~~~~~~~ 490 (733)
=+.+.+.+
T Consensus 318 ie~lEr~~ 325 (348)
T PF08733_consen 318 IERLERKE 325 (348)
T ss_pred HHHHHHHH
Confidence 44443333
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.56 E-value=72 Score=25.41 Aligned_cols=28 Identities=29% Similarity=0.507 Sum_probs=14.3
Q ss_pred HHHhhhhhhhhhhHHhhhhhhccCcChH
Q 004722 471 VTLSIMCIWQYGTLKKHSYESHNKVCLD 498 (733)
Q Consensus 471 i~~~iM~~W~~G~~~~~~~~~~~~~~~~ 498 (733)
++|.....|.+-++.+.+++....+|++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3344444555544445555555566654
Done!