Query 004726
Match_columns 733
No_of_seqs 573 out of 4632
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:50:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 7E-134 2E-138 1168.0 72.5 695 8-720 25-739 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 7E-125 2E-129 1101.0 72.6 703 1-709 4-713 (725)
3 1wdk_A Fatty oxidation complex 100.0 7E-124 2E-128 1092.2 67.2 692 4-709 6-712 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 1.8E-79 6.3E-84 673.8 39.4 396 303-711 49-448 (460)
5 3mog_A Probable 3-hydroxybutyr 100.0 9.9E-74 3.4E-78 638.7 43.4 406 306-715 3-478 (483)
6 1zcj_A Peroxisomal bifunctiona 100.0 6.6E-74 2.3E-78 640.7 41.2 430 275-710 1-448 (463)
7 3hrx_A Probable enoyl-COA hydr 100.0 6.4E-54 2.2E-58 442.4 28.5 250 6-295 2-252 (254)
8 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 1.3E-53 4.6E-58 443.5 28.1 254 4-295 15-272 (274)
9 4fzw_A 2,3-dehydroadipyl-COA h 100.0 1.5E-53 5.1E-58 439.5 25.0 251 4-295 5-256 (258)
10 3ado_A Lambda-crystallin; L-gu 100.0 1.6E-52 5.6E-57 440.2 25.6 268 307-585 5-281 (319)
11 3kqf_A Enoyl-COA hydratase/iso 100.0 3.5E-52 1.2E-56 431.3 26.0 256 1-295 5-263 (265)
12 3pea_A Enoyl-COA hydratase/iso 100.0 3.2E-52 1.1E-56 430.6 25.2 255 3-295 5-259 (261)
13 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 4E-52 1.4E-56 434.1 25.3 258 307-586 11-273 (293)
14 3i47_A Enoyl COA hydratase/iso 100.0 6.8E-52 2.3E-56 429.2 25.8 258 1-297 1-262 (268)
15 4e12_A Diketoreductase; oxidor 100.0 9.5E-52 3.2E-56 434.1 26.6 275 307-584 3-283 (283)
16 3hin_A Putative 3-hydroxybutyr 100.0 3.6E-52 1.2E-56 432.2 22.1 256 1-297 13-269 (275)
17 3moy_A Probable enoyl-COA hydr 100.0 8E-52 2.7E-56 427.8 24.5 254 1-295 6-261 (263)
18 3h81_A Enoyl-COA hydratase ECH 100.0 1.1E-51 3.7E-56 429.3 25.0 254 1-295 22-276 (278)
19 3gow_A PAAG, probable enoyl-CO 100.0 6.6E-51 2.3E-55 419.4 28.4 250 6-295 2-252 (254)
20 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 3.3E-50 1.1E-54 426.8 33.5 282 304-585 11-302 (302)
21 3fdu_A Putative enoyl-COA hydr 100.0 6.1E-51 2.1E-55 422.0 26.6 254 1-297 1-259 (266)
22 3swx_A Probable enoyl-COA hydr 100.0 2.4E-51 8.1E-56 425.4 22.7 256 1-295 5-263 (265)
23 3p5m_A Enoyl-COA hydratase/iso 100.0 8.6E-51 2.9E-55 418.5 26.4 248 3-295 5-253 (255)
24 3myb_A Enoyl-COA hydratase; ss 100.0 7.7E-51 2.6E-55 425.0 26.3 258 1-298 22-282 (286)
25 3lke_A Enoyl-COA hydratase; ny 100.0 2.6E-51 8.8E-56 424.4 22.1 256 1-294 1-262 (263)
26 3g64_A Putative enoyl-COA hydr 100.0 1.4E-50 4.8E-55 422.8 27.6 256 3-296 16-276 (279)
27 3sll_A Probable enoyl-COA hydr 100.0 1.5E-50 5.2E-55 424.0 26.8 255 4-296 24-288 (290)
28 3qmj_A Enoyl-COA hydratase, EC 100.0 4.4E-51 1.5E-55 421.5 21.6 251 3-291 5-256 (256)
29 1nzy_A Dehalogenase, 4-chlorob 100.0 9.2E-51 3.1E-55 422.2 24.1 258 1-297 1-263 (269)
30 3rsi_A Putative enoyl-COA hydr 100.0 2.5E-50 8.5E-55 417.8 27.2 253 1-295 5-263 (265)
31 3qxz_A Enoyl-COA hydratase/iso 100.0 4.1E-51 1.4E-55 423.3 20.6 254 3-296 6-263 (265)
32 2ppy_A Enoyl-COA hydratase; be 100.0 3.8E-50 1.3E-54 416.6 27.7 253 3-295 8-263 (265)
33 2ej5_A Enoyl-COA hydratase sub 100.0 2.4E-50 8.4E-55 416.2 26.0 251 4-295 3-255 (257)
34 2pbp_A Enoyl-COA hydratase sub 100.0 3.2E-50 1.1E-54 415.5 26.2 254 1-295 1-256 (258)
35 3tlf_A Enoyl-COA hydratase/iso 100.0 1.7E-50 6E-55 421.3 23.7 253 4-295 11-272 (274)
36 3gkb_A Putative enoyl-COA hydr 100.0 1.7E-50 5.8E-55 422.2 23.6 251 3-294 8-266 (287)
37 1ef8_A Methylmalonyl COA decar 100.0 3.4E-50 1.2E-54 416.0 25.4 254 1-295 1-259 (261)
38 3trr_A Probable enoyl-COA hydr 100.0 3.5E-50 1.2E-54 413.9 24.7 250 1-296 5-255 (256)
39 4hdt_A 3-hydroxyisobutyryl-COA 100.0 6.5E-50 2.2E-54 429.1 27.4 292 3-297 8-325 (353)
40 3qre_A Enoyl-COA hydratase, EC 100.0 4.3E-51 1.5E-55 429.0 17.1 257 3-297 28-294 (298)
41 2vx2_A Enoyl-COA hydratase dom 100.0 6.9E-50 2.4E-54 418.0 25.4 253 3-294 32-285 (287)
42 3r9t_A ECHA1_1; ssgcid, seattl 100.0 3.3E-50 1.1E-54 416.7 22.4 253 3-295 8-265 (267)
43 4f47_A Enoyl-COA hydratase ECH 100.0 4E-50 1.4E-54 419.2 22.6 254 3-295 19-276 (278)
44 1dci_A Dienoyl-COA isomerase; 100.0 1.9E-49 6.5E-54 413.9 27.7 257 2-295 1-273 (275)
45 3hp0_A Putative polyketide bio 100.0 1.1E-49 3.7E-54 412.2 25.5 254 1-297 4-259 (267)
46 3r9q_A Enoyl-COA hydratase/iso 100.0 2.1E-50 7.3E-55 416.6 20.1 249 4-295 11-260 (262)
47 1wz8_A Enoyl-COA hydratase; ly 100.0 5.5E-50 1.9E-54 414.9 23.1 253 3-294 9-263 (264)
48 4eml_A Naphthoate synthase; 1, 100.0 9.8E-50 3.4E-54 414.6 24.7 256 2-296 8-270 (275)
49 3qxi_A Enoyl-COA hydratase ECH 100.0 1.4E-49 4.8E-54 411.5 23.4 251 2-296 13-264 (265)
50 2f6q_A Peroxisomal 3,2-trans-e 100.0 1.4E-49 4.9E-54 414.8 23.2 251 2-292 24-279 (280)
51 2uzf_A Naphthoate synthase; ly 100.0 4.5E-49 1.5E-53 409.8 26.8 253 3-296 12-268 (273)
52 3qk8_A Enoyl-COA hydratase ECH 100.0 4.5E-50 1.5E-54 416.8 19.0 253 3-296 12-268 (272)
53 1sg4_A 3,2-trans-enoyl-COA iso 100.0 7.9E-50 2.7E-54 412.8 19.5 250 6-294 7-259 (260)
54 3t89_A 1,4-dihydroxy-2-naphtho 100.0 3.5E-49 1.2E-53 412.7 24.5 257 1-296 24-284 (289)
55 2j5i_A P-hydroxycinnamoyl COA 100.0 2.6E-49 8.9E-54 412.3 23.3 255 3-294 8-271 (276)
56 3rrv_A Enoyl-COA hydratase/iso 100.0 2.5E-49 8.6E-54 411.4 23.0 247 4-290 28-276 (276)
57 3oc7_A Enoyl-COA hydratase; se 100.0 5.8E-49 2E-53 408.2 25.5 253 1-295 5-266 (267)
58 2fbm_A Y chromosome chromodoma 100.0 1.7E-49 5.8E-54 415.5 21.0 256 2-296 21-282 (291)
59 2gtr_A CDY-like, chromodomain 100.0 2.3E-49 8E-54 409.8 20.8 254 2-294 3-261 (261)
60 3lao_A Enoyl-COA hydratase/iso 100.0 1.4E-49 4.9E-54 410.4 18.8 247 2-287 10-258 (258)
61 2a7k_A CARB; crotonase, antibi 100.0 2.8E-49 9.5E-54 406.8 20.8 247 6-291 2-250 (250)
62 1mj3_A Enoyl-COA hydratase, mi 100.0 7.4E-49 2.5E-53 405.5 23.8 254 2-295 2-258 (260)
63 1uiy_A Enoyl-COA hydratase; ly 100.0 5.7E-49 2E-53 405.2 22.8 248 6-293 2-252 (253)
64 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 3E-49 1E-53 419.5 21.2 256 3-296 54-329 (334)
65 3h0u_A Putative enoyl-COA hydr 100.0 1.2E-48 4E-53 408.8 24.3 247 3-288 7-257 (289)
66 3pe8_A Enoyl-COA hydratase; em 100.0 3.7E-49 1.3E-53 405.7 19.0 244 3-294 8-255 (256)
67 3l3s_A Enoyl-COA hydratase/iso 100.0 1.5E-48 5.3E-53 403.6 23.5 251 1-289 3-258 (263)
68 3he2_A Enoyl-COA hydratase ECH 100.0 2E-48 6.9E-53 400.9 21.5 242 3-295 20-262 (264)
69 4di1_A Enoyl-COA hydratase ECH 100.0 3.1E-48 1.1E-52 402.7 22.8 243 1-293 22-264 (277)
70 1hzd_A AUH, AU-binding protein 100.0 5.2E-48 1.8E-52 401.6 21.4 254 4-295 8-270 (272)
71 3bpt_A 3-hydroxyisobutyryl-COA 100.0 4.5E-47 1.5E-51 409.5 25.6 290 3-296 5-331 (363)
72 3isa_A Putative enoyl-COA hydr 100.0 1.8E-47 6.2E-52 393.5 20.1 243 5-297 8-251 (254)
73 2q35_A CURF; crotonase, lyase; 100.0 2.8E-47 9.6E-52 389.5 19.3 238 6-287 5-243 (243)
74 3ju1_A Enoyl-COA hydratase/iso 100.0 2.6E-47 8.8E-52 415.3 19.4 288 3-297 41-377 (407)
75 1pjh_A Enoyl-COA isomerase; EC 100.0 7.8E-47 2.7E-51 394.7 21.3 243 1-293 6-266 (280)
76 3r6h_A Enoyl-COA hydratase, EC 100.0 4.2E-46 1.5E-50 378.3 19.5 230 1-271 3-232 (233)
77 2j5g_A ALR4455 protein; enzyme 100.0 4.3E-46 1.5E-50 384.1 19.6 239 3-291 22-263 (263)
78 3ot6_A Enoyl-COA hydratase/iso 100.0 1.1E-45 3.7E-50 375.1 17.6 225 4-270 6-231 (232)
79 3m6n_A RPFF protein; enoyl-COA 100.0 1.5E-44 5.1E-49 381.0 24.7 255 3-295 29-300 (305)
80 3njd_A Enoyl-COA hydratase; ss 100.0 5E-44 1.7E-48 381.6 26.1 204 1-209 32-265 (333)
81 1szo_A 6-oxocamphor hydrolase; 100.0 2.9E-44 9.9E-49 369.7 20.1 237 4-291 16-254 (257)
82 2np9_A DPGC; protein inhibitor 100.0 2.4E-44 8.4E-49 390.7 20.5 246 4-292 167-440 (440)
83 3t3w_A Enoyl-COA hydratase; ss 100.0 1.2E-43 4.2E-48 369.8 21.1 205 1-209 17-226 (279)
84 2dpo_A L-gulonate 3-dehydrogen 100.0 1.8E-42 6.1E-47 367.0 26.6 245 306-551 4-256 (319)
85 2w3p_A Benzoyl-COA-dihydrodiol 100.0 1.4E-39 4.7E-44 355.1 15.7 204 3-209 20-245 (556)
86 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 1.5E-23 5E-28 186.4 4.7 103 478-580 3-109 (110)
87 3mog_A Probable 3-hydroxybutyr 99.9 3.1E-22 1.1E-26 223.3 16.4 150 422-577 324-476 (483)
88 3bf0_A Protease 4; bacterial, 99.8 1.5E-20 5.1E-25 215.0 6.9 168 12-197 300-515 (593)
89 3ctv_A HBD-10, 3-hydroxyacyl-C 99.8 2.9E-20 1E-24 165.1 5.0 92 619-714 15-109 (110)
90 3rst_A Signal peptide peptidas 99.8 1.2E-18 4E-23 177.1 14.6 167 12-197 2-224 (240)
91 2ewd_A Lactate dehydrogenase,; 99.8 2.9E-19 9.8E-24 190.0 8.7 203 309-547 5-237 (317)
92 3tri_A Pyrroline-5-carboxylate 99.8 6E-18 2.1E-22 176.4 15.2 188 308-522 3-206 (280)
93 3viv_A 441AA long hypothetical 99.7 8.1E-18 2.8E-22 168.0 14.2 148 12-186 7-174 (230)
94 3d1l_A Putative NADP oxidoredu 99.7 2.2E-17 7.5E-22 171.1 12.9 211 309-549 11-247 (266)
95 3ggo_A Prephenate dehydrogenas 99.7 3.6E-16 1.2E-20 165.4 17.8 155 307-487 32-204 (314)
96 2h78_A Hibadh, 3-hydroxyisobut 99.7 1.5E-16 5E-21 168.1 14.7 190 307-525 2-212 (302)
97 3obb_A Probable 3-hydroxyisobu 99.7 7E-17 2.4E-21 169.5 12.0 187 307-526 2-213 (300)
98 3gt0_A Pyrroline-5-carboxylate 99.7 1.1E-16 3.7E-21 164.0 13.0 188 309-522 3-204 (247)
99 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 1.7E-16 5.8E-21 167.6 10.4 96 620-719 203-302 (302)
100 3doj_A AT3G25530, dehydrogenas 99.7 1.5E-16 5.2E-21 168.5 9.5 190 306-525 19-230 (310)
101 4gbj_A 6-phosphogluconate dehy 99.6 1.4E-16 4.7E-21 167.4 7.0 185 309-525 6-213 (297)
102 3qsg_A NAD-binding phosphogluc 99.6 3.1E-16 1.1E-20 166.2 9.2 188 306-525 22-231 (312)
103 3qha_A Putative oxidoreductase 99.6 6E-16 2.1E-20 162.8 11.3 184 309-522 16-222 (296)
104 3g0o_A 3-hydroxyisobutyrate de 99.6 2.6E-15 8.9E-20 158.5 16.1 189 308-524 7-217 (303)
105 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 1.6E-16 5.3E-21 165.5 6.6 97 622-720 174-273 (293)
106 3pef_A 6-phosphogluconate dehy 99.6 6E-16 2.1E-20 162.1 10.3 187 309-525 2-210 (287)
107 3pdu_A 3-hydroxyisobutyrate de 99.6 1.8E-16 6.2E-21 166.1 5.3 189 308-525 1-210 (287)
108 2i76_A Hypothetical protein; N 99.6 9.4E-16 3.2E-20 159.7 9.7 210 309-554 3-240 (276)
109 4dll_A 2-hydroxy-3-oxopropiona 99.6 2.3E-15 7.8E-20 160.2 12.5 189 308-525 31-238 (320)
110 3dfu_A Uncharacterized protein 99.6 2.9E-15 9.8E-20 149.6 8.7 158 308-518 6-173 (232)
111 4e12_A Diketoreductase; oxidor 99.6 5.2E-16 1.8E-20 162.2 3.4 94 619-718 188-283 (283)
112 3c24_A Putative oxidoreductase 99.6 3E-14 1E-18 149.1 15.4 188 308-522 11-228 (286)
113 2izz_A Pyrroline-5-carboxylate 99.5 4.7E-14 1.6E-18 150.1 16.0 187 308-522 22-228 (322)
114 2y0c_A BCEC, UDP-glucose dehyd 99.5 1.3E-14 4.4E-19 162.0 11.4 204 309-522 9-257 (478)
115 3k6j_A Protein F01G10.3, confi 99.5 1.4E-14 4.7E-19 159.2 10.5 91 619-721 232-325 (460)
116 3ktd_A Prephenate dehydrogenas 99.5 2.4E-14 8.2E-19 152.4 11.5 152 308-487 8-186 (341)
117 3l6d_A Putative oxidoreductase 99.5 3.5E-14 1.2E-18 150.0 11.3 186 308-522 9-211 (306)
118 4ezb_A Uncharacterized conserv 99.5 2.3E-13 8E-18 144.2 17.2 192 308-525 24-233 (317)
119 3g79_A NDP-N-acetyl-D-galactos 99.5 5.3E-14 1.8E-18 155.9 12.7 206 307-525 17-274 (478)
120 3b1f_A Putative prephenate deh 99.5 1.4E-13 4.9E-18 144.2 14.5 159 306-488 4-181 (290)
121 1yqg_A Pyrroline-5-carboxylate 99.5 3.1E-13 1.1E-17 139.4 16.7 148 310-487 2-152 (263)
122 2uyy_A N-PAC protein; long-cha 99.5 3.2E-14 1.1E-18 151.1 9.0 187 308-522 30-235 (316)
123 1y7o_A ATP-dependent CLP prote 99.5 9.1E-14 3.1E-18 138.4 11.6 140 27-188 53-214 (218)
124 4e21_A 6-phosphogluconate dehy 99.5 4.5E-14 1.5E-18 151.7 9.9 174 308-511 22-233 (358)
125 2f9y_B Acetyl-coenzyme A carbo 99.5 7.3E-14 2.5E-18 145.4 11.1 157 15-204 120-281 (304)
126 3zwc_A Peroxisomal bifunctiona 99.5 3.2E-14 1.1E-18 165.4 7.4 98 619-722 495-605 (742)
127 3cky_A 2-hydroxymethyl glutara 99.5 1.4E-13 4.7E-18 145.1 11.5 186 309-522 5-209 (301)
128 2ahr_A Putative pyrroline carb 99.5 5.6E-13 1.9E-17 137.3 15.7 183 309-522 4-197 (259)
129 1wdk_A Fatty oxidation complex 99.5 4.4E-14 1.5E-18 165.1 7.5 95 619-719 495-593 (715)
130 2g5c_A Prephenate dehydrogenas 99.4 1.1E-12 3.9E-17 136.6 16.9 155 308-488 1-173 (281)
131 2wtb_A MFP2, fatty acid multif 99.4 7.5E-14 2.6E-18 163.3 8.4 94 619-719 493-589 (725)
132 2f1k_A Prephenate dehydrogenas 99.4 1.3E-12 4.6E-17 135.9 16.9 154 310-488 2-167 (279)
133 4a7p_A UDP-glucose dehydrogena 99.4 6.6E-13 2.3E-17 146.3 14.9 199 309-522 9-251 (446)
134 3pid_A UDP-glucose 6-dehydroge 99.4 6.2E-13 2.1E-17 145.1 13.6 196 307-522 35-268 (432)
135 3ojo_A CAP5O; rossmann fold, c 99.4 6.4E-13 2.2E-17 145.3 13.5 194 309-522 12-250 (431)
136 2gf2_A Hibadh, 3-hydroxyisobut 99.4 1.1E-13 3.7E-18 145.5 7.0 180 310-522 2-205 (296)
137 3gg2_A Sugar dehydrogenase, UD 99.4 2E-12 6.8E-17 143.2 17.4 200 309-522 3-247 (450)
138 1zcj_A Peroxisomal bifunctiona 99.4 2.8E-13 9.6E-18 150.9 10.6 108 463-572 331-446 (463)
139 2ew2_A 2-dehydropantoate 2-red 99.4 2.9E-12 9.9E-17 135.6 17.8 168 308-489 3-184 (316)
140 1vpd_A Tartronate semialdehyde 99.4 8.8E-13 3E-17 138.7 13.1 188 309-522 6-210 (299)
141 2q3e_A UDP-glucose 6-dehydroge 99.4 5.7E-13 2E-17 148.8 12.2 202 308-522 5-256 (467)
142 4huj_A Uncharacterized protein 99.4 3.9E-13 1.3E-17 134.9 8.5 154 306-488 21-198 (220)
143 1yb4_A Tartronic semialdehyde 99.4 3.1E-13 1.1E-17 141.9 7.9 183 308-522 3-207 (295)
144 2rcy_A Pyrroline carboxylate r 99.4 1.8E-12 6.2E-17 133.6 13.1 146 309-488 5-156 (262)
145 1mv8_A GMD, GDP-mannose 6-dehy 99.4 8.8E-13 3E-17 146.2 11.4 197 310-522 2-245 (436)
146 3k96_A Glycerol-3-phosphate de 99.4 3.1E-12 1.1E-16 137.4 14.9 169 306-491 27-208 (356)
147 2o3j_A UDP-glucose 6-dehydroge 99.4 1.8E-12 6.2E-17 145.0 13.1 200 307-522 8-262 (481)
148 2p4q_A 6-phosphogluconate dehy 99.4 9.9E-13 3.4E-17 147.2 10.8 191 309-523 11-227 (497)
149 2zyd_A 6-phosphogluconate dehy 99.3 2.9E-12 9.9E-17 143.1 13.0 191 307-522 14-231 (480)
150 4gwg_A 6-phosphogluconate dehy 99.3 3E-12 1E-16 142.0 12.9 192 307-523 3-222 (484)
151 2f9i_A Acetyl-coenzyme A carbo 99.3 5.2E-12 1.8E-16 132.7 13.9 138 26-186 139-276 (327)
152 2pv7_A T-protein [includes: ch 99.3 3.4E-12 1.1E-16 134.2 12.2 139 308-488 21-166 (298)
153 2iz1_A 6-phosphogluconate dehy 99.3 6.1E-12 2.1E-16 140.6 14.7 191 308-523 5-223 (474)
154 2cvz_A Dehydrogenase, 3-hydrox 99.3 2.9E-12 1E-16 134.0 10.3 183 309-522 2-200 (289)
155 1np3_A Ketol-acid reductoisome 99.3 3.8E-12 1.3E-16 136.1 10.1 181 309-518 17-223 (338)
156 2f9y_A Acetyl-COA carboxylase, 99.3 8.8E-12 3E-16 131.3 12.6 138 26-186 153-290 (339)
157 3vtf_A UDP-glucose 6-dehydroge 99.3 2.2E-11 7.6E-16 132.8 15.2 204 307-527 20-271 (444)
158 1i36_A Conserved hypothetical 99.3 2.3E-11 7.9E-16 125.4 13.4 173 310-522 2-193 (264)
159 1jay_A Coenzyme F420H2:NADP+ o 99.3 1E-11 3.6E-16 123.6 10.1 156 310-488 2-181 (212)
160 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 3.1E-11 1.1E-15 134.9 13.1 193 310-523 3-221 (478)
161 3dtt_A NADP oxidoreductase; st 99.2 3.7E-11 1.3E-15 122.5 11.9 164 308-488 19-213 (245)
162 2pgd_A 6-phosphogluconate dehy 99.2 2.2E-11 7.6E-16 136.4 10.7 191 309-523 3-220 (482)
163 2raf_A Putative dinucleotide-b 99.2 2.9E-11 9.8E-16 120.2 8.4 134 308-488 19-176 (209)
164 1evy_A Glycerol-3-phosphate de 99.2 5.4E-11 1.9E-15 128.8 11.2 169 308-489 15-200 (366)
165 2vns_A Metalloreductase steap3 99.2 1.9E-11 6.7E-16 122.0 6.4 149 307-488 27-194 (215)
166 2hjr_A Malate dehydrogenase; m 99.2 4.2E-11 1.4E-15 127.2 8.9 122 309-444 15-155 (328)
167 1dlj_A UDP-glucose dehydrogena 99.1 4.7E-10 1.6E-14 122.7 14.8 198 310-522 2-239 (402)
168 1t2d_A LDH-P, L-lactate dehydr 99.1 8.9E-11 3E-15 124.3 8.6 123 308-444 4-150 (322)
169 3fr7_A Putative ketol-acid red 99.1 1.5E-10 5.2E-15 125.4 10.0 154 308-484 54-232 (525)
170 1x0v_A GPD-C, GPDH-C, glycerol 99.1 1.1E-10 3.6E-15 125.9 8.3 169 308-490 8-200 (354)
171 1yj8_A Glycerol-3-phosphate de 99.1 1.7E-10 5.7E-15 125.4 9.5 169 308-491 21-218 (375)
172 1ks9_A KPA reductase;, 2-dehyd 99.1 7.9E-11 2.7E-15 123.0 5.6 168 310-499 2-179 (291)
173 1pzg_A LDH, lactate dehydrogen 99.1 1.5E-10 5.2E-15 123.0 7.5 123 308-444 9-156 (331)
174 1z82_A Glycerol-3-phosphate de 99.0 9.7E-10 3.3E-14 117.4 12.5 159 309-489 15-181 (335)
175 2qyt_A 2-dehydropantoate 2-red 99.0 5.9E-10 2E-14 118.0 9.1 166 308-488 8-193 (317)
176 1txg_A Glycerol-3-phosphate de 99.0 5.9E-10 2E-14 119.0 8.8 162 310-489 2-182 (335)
177 2i6t_A Ubiquitin-conjugating e 99.0 4.9E-10 1.7E-14 117.3 6.9 118 304-444 10-149 (303)
178 1a5z_A L-lactate dehydrogenase 99.0 8.2E-10 2.8E-14 117.0 8.4 157 310-503 2-181 (319)
179 3hwr_A 2-dehydropantoate 2-red 98.9 3.6E-09 1.2E-13 112.1 12.6 172 308-499 19-200 (318)
180 3ghy_A Ketopantoate reductase 98.9 3.3E-09 1.1E-13 113.2 12.4 168 308-491 3-201 (335)
181 2yjz_A Metalloreductase steap4 98.4 1.2E-10 4.2E-15 114.7 0.0 148 309-488 20-182 (201)
182 2cby_A ATP-dependent CLP prote 98.9 6.5E-09 2.2E-13 102.6 11.6 141 27-193 35-200 (208)
183 1ur5_A Malate dehydrogenase; o 98.8 4.9E-09 1.7E-13 110.4 8.9 99 309-420 3-116 (309)
184 3ado_A Lambda-crystallin; L-gu 98.8 2.4E-09 8.2E-14 112.2 6.4 61 619-680 190-250 (319)
185 3hn2_A 2-dehydropantoate 2-red 98.8 4.8E-08 1.7E-12 103.1 13.7 173 309-497 3-187 (312)
186 2w2k_A D-mandelate dehydrogena 98.7 5E-09 1.7E-13 112.1 5.5 117 309-449 164-285 (348)
187 2v6b_A L-LDH, L-lactate dehydr 98.7 9.7E-09 3.3E-13 107.9 7.5 120 309-444 1-138 (304)
188 2gcg_A Glyoxylate reductase/hy 98.7 4.8E-09 1.7E-13 111.5 4.3 116 309-450 156-276 (330)
189 3tl2_A Malate dehydrogenase; c 98.7 4.5E-08 1.6E-12 102.8 10.0 104 304-420 4-124 (315)
190 2d4a_B Malate dehydrogenase; a 98.7 3.9E-08 1.3E-12 103.3 8.9 110 310-434 1-125 (308)
191 2dbq_A Glyoxylate reductase; D 98.7 6.1E-09 2.1E-13 110.8 2.7 115 309-449 151-269 (334)
192 3i83_A 2-dehydropantoate 2-red 98.6 9.6E-08 3.3E-12 101.2 10.9 165 309-491 3-183 (320)
193 1guz_A Malate dehydrogenase; o 98.6 1.6E-07 5.3E-12 99.0 12.1 98 310-419 2-115 (310)
194 2d0i_A Dehydrogenase; structur 98.6 1.4E-08 4.7E-13 107.9 3.9 112 309-448 147-263 (333)
195 3gvi_A Malate dehydrogenase; N 98.6 7.3E-08 2.5E-12 101.5 9.3 102 307-421 6-122 (324)
196 3ba1_A HPPR, hydroxyphenylpyru 98.6 7.3E-09 2.5E-13 109.8 1.6 111 309-448 165-279 (333)
197 1hyh_A L-hicdh, L-2-hydroxyiso 98.6 1.1E-07 3.7E-12 100.2 10.6 97 309-420 2-119 (309)
198 3p7m_A Malate dehydrogenase; p 98.6 6.6E-08 2.2E-12 101.9 8.7 103 306-421 3-120 (321)
199 3ldh_A Lactate dehydrogenase; 98.6 4.7E-08 1.6E-12 102.7 7.2 100 307-420 20-135 (330)
200 2w3p_A Benzoyl-COA-dihydrodiol 98.6 2.8E-07 9.7E-12 101.2 13.2 201 3-211 265-500 (556)
201 1lld_A L-lactate dehydrogenase 98.6 2.7E-07 9.2E-12 97.6 12.4 106 308-427 7-128 (319)
202 3c7a_A Octopine dehydrogenase; 98.5 8.8E-08 3E-12 104.9 7.9 107 309-427 3-120 (404)
203 1bg6_A N-(1-D-carboxylethyl)-L 98.5 1.6E-07 5.6E-12 100.9 9.6 103 308-422 4-108 (359)
204 3gvx_A Glycerate dehydrogenase 98.5 2.9E-08 1E-12 102.8 3.1 124 309-461 123-255 (290)
205 1obb_A Maltase, alpha-glucosid 98.5 3.8E-07 1.3E-11 100.7 11.8 76 309-396 4-86 (480)
206 1ldn_A L-lactate dehydrogenase 98.5 1.3E-07 4.5E-12 99.8 7.6 112 307-434 5-132 (316)
207 1ygy_A PGDH, D-3-phosphoglycer 98.5 4.2E-08 1.4E-12 110.8 3.7 149 309-483 143-308 (529)
208 1gdh_A D-glycerate dehydrogena 98.5 1.5E-07 5.2E-12 99.3 7.4 140 309-473 147-299 (320)
209 1oju_A MDH, malate dehydrogena 98.4 8.2E-07 2.8E-11 92.3 10.5 107 310-431 2-124 (294)
210 4dgs_A Dehydrogenase; structur 98.4 8.1E-07 2.8E-11 94.0 9.9 110 309-447 172-285 (340)
211 3evt_A Phosphoglycerate dehydr 98.4 1.9E-07 6.6E-12 98.3 4.9 127 309-461 138-276 (324)
212 1wwk_A Phosphoglycerate dehydr 98.4 5E-07 1.7E-11 94.8 8.0 138 309-472 143-293 (307)
213 3jtm_A Formate dehydrogenase, 98.4 3.2E-07 1.1E-11 97.7 6.3 103 309-435 165-270 (351)
214 3ego_A Probable 2-dehydropanto 98.4 1.2E-06 4.2E-11 92.0 10.7 116 309-443 3-119 (307)
215 4fgw_A Glycerol-3-phosphate de 98.3 8E-08 2.7E-12 103.2 0.5 110 309-427 35-155 (391)
216 2f6i_A ATP-dependent CLP prote 98.3 2.1E-06 7.3E-11 84.7 10.5 136 27-186 47-203 (215)
217 3gg9_A D-3-phosphoglycerate de 98.3 8.5E-07 2.9E-11 94.5 8.1 139 309-472 161-312 (352)
218 1qp8_A Formate dehydrogenase; 98.3 6.7E-07 2.3E-11 93.5 7.2 133 309-471 125-273 (303)
219 4g2n_A D-isomer specific 2-hyd 98.3 7.2E-07 2.5E-11 94.6 7.2 101 309-435 174-277 (345)
220 3qwd_A ATP-dependent CLP prote 98.3 3.2E-06 1.1E-10 82.5 11.2 135 27-187 35-193 (203)
221 2ekl_A D-3-phosphoglycerate de 98.3 2.2E-07 7.5E-12 97.8 2.8 101 309-435 143-246 (313)
222 1u8x_X Maltose-6'-phosphate gl 98.3 2.7E-06 9.2E-11 94.0 11.4 77 309-397 29-112 (472)
223 3nep_X Malate dehydrogenase; h 98.3 1.6E-06 5.4E-11 90.9 9.0 99 310-421 2-116 (314)
224 3fef_A Putative glucosidase LP 98.3 9.2E-07 3.1E-11 96.9 7.4 72 309-396 6-84 (450)
225 3k5p_A D-3-phosphoglycerate de 98.3 9.7E-07 3.3E-11 95.5 7.5 134 309-470 157-307 (416)
226 3pqe_A L-LDH, L-lactate dehydr 98.3 2E-06 7E-11 90.6 9.5 101 306-421 3-120 (326)
227 1yg6_A ATP-dependent CLP prote 98.2 1.7E-06 5.7E-11 84.3 7.9 134 27-186 34-191 (193)
228 3hg7_A D-isomer specific 2-hyd 98.2 2.6E-07 9E-12 97.1 2.2 127 309-461 141-279 (324)
229 3g17_A Similar to 2-dehydropan 98.2 8.1E-08 2.8E-12 100.4 -1.8 162 309-499 3-172 (294)
230 2nac_A NAD-dependent formate d 98.2 8E-07 2.7E-11 95.8 5.9 104 309-436 192-298 (393)
231 2dpo_A L-gulonate 3-dehydrogen 98.2 1.1E-06 3.6E-11 92.7 6.6 83 619-704 190-281 (319)
232 4aj2_A L-lactate dehydrogenase 98.2 1.2E-06 4.2E-11 92.3 7.0 101 306-420 17-133 (331)
233 4hy3_A Phosphoglycerate oxidor 98.2 2.1E-06 7E-11 91.7 8.8 138 309-473 177-327 (365)
234 1sc6_A PGDH, D-3-phosphoglycer 98.2 8.1E-07 2.8E-11 96.5 5.0 99 309-435 146-247 (404)
235 3pp8_A Glyoxylate/hydroxypyruv 98.2 3.6E-07 1.2E-11 95.9 1.8 101 309-435 140-243 (315)
236 2cuk_A Glycerate dehydrogenase 98.2 1.3E-06 4.4E-11 91.8 5.7 131 309-470 145-287 (311)
237 2g76_A 3-PGDH, D-3-phosphoglyc 98.2 1E-06 3.6E-11 93.2 4.9 101 309-435 166-269 (335)
238 1tg6_A Putative ATP-dependent 98.2 5.6E-06 1.9E-10 84.1 9.8 134 27-186 90-247 (277)
239 2pi1_A D-lactate dehydrogenase 98.1 7.4E-07 2.5E-11 94.4 3.4 100 309-435 142-244 (334)
240 4e5n_A Thermostable phosphite 98.1 4.4E-07 1.5E-11 96.0 1.1 102 309-435 146-250 (330)
241 1mx3_A CTBP1, C-terminal bindi 98.1 1.3E-06 4.5E-11 92.9 3.3 102 309-435 169-273 (347)
242 3d0o_A L-LDH 1, L-lactate dehy 98.1 2.1E-05 7.2E-10 82.8 12.2 109 309-433 7-131 (317)
243 2j6i_A Formate dehydrogenase; 98.1 1.2E-06 4.2E-11 93.9 2.7 103 309-435 165-271 (364)
244 1j4a_A D-LDH, D-lactate dehydr 98.0 2.1E-06 7.3E-11 91.0 4.3 100 309-435 147-249 (333)
245 3llv_A Exopolyphosphatase-rela 98.0 1.9E-05 6.4E-10 72.5 10.2 103 308-428 6-109 (141)
246 2yq5_A D-isomer specific 2-hyd 98.0 9.4E-07 3.2E-11 93.7 1.3 110 309-446 149-262 (343)
247 2x0j_A Malate dehydrogenase; o 98.0 1.2E-05 4E-10 83.3 9.4 100 309-421 1-116 (294)
248 2i99_A MU-crystallin homolog; 98.0 4.1E-06 1.4E-10 88.1 6.0 88 309-423 136-226 (312)
249 1lss_A TRK system potassium up 98.0 4.3E-05 1.5E-09 69.5 11.7 96 309-421 5-101 (140)
250 3p2l_A ATP-dependent CLP prote 98.0 7.8E-06 2.7E-10 79.7 6.9 137 27-189 38-199 (201)
251 1y6j_A L-lactate dehydrogenase 98.0 6.2E-06 2.1E-10 86.9 6.4 108 308-433 7-131 (318)
252 3fi9_A Malate dehydrogenase; s 98.0 9.6E-06 3.3E-10 85.9 7.7 95 308-417 8-120 (343)
253 1s6y_A 6-phospho-beta-glucosid 98.0 2.5E-05 8.7E-10 85.8 10.9 76 309-396 8-92 (450)
254 3vku_A L-LDH, L-lactate dehydr 97.9 1.3E-05 4.3E-10 84.4 7.6 99 307-421 8-123 (326)
255 1pix_A Glutaconyl-COA decarbox 97.9 4.9E-05 1.7E-09 85.5 12.7 159 25-203 118-285 (587)
256 3oet_A Erythronate-4-phosphate 97.9 1.7E-06 5.8E-11 92.5 0.7 110 309-448 120-238 (381)
257 1dxy_A D-2-hydroxyisocaproate 97.9 3E-06 1E-10 89.9 1.4 100 309-436 146-248 (333)
258 2o4c_A Erythronate-4-phosphate 97.9 2.8E-06 9.6E-11 91.0 1.2 99 309-436 117-222 (380)
259 1ez4_A Lactate dehydrogenase; 97.8 3.6E-05 1.2E-09 81.0 9.4 106 309-432 6-128 (318)
260 2zqz_A L-LDH, L-lactate dehydr 97.8 3.6E-05 1.2E-09 81.2 9.2 106 309-432 10-132 (326)
261 3oj0_A Glutr, glutamyl-tRNA re 97.8 6.5E-06 2.2E-10 76.1 3.0 69 309-398 22-91 (144)
262 2xxj_A L-LDH, L-lactate dehydr 97.8 4E-05 1.4E-09 80.3 9.3 107 309-432 1-123 (310)
263 1xdw_A NAD+-dependent (R)-2-hy 97.7 3.9E-06 1.3E-10 88.9 -0.1 99 309-435 147-248 (331)
264 3c85_A Putative glutathione-re 97.7 0.00011 3.7E-09 70.6 10.2 39 309-347 40-79 (183)
265 3ic5_A Putative saccharopine d 97.7 4.7E-05 1.6E-09 67.0 7.0 40 308-347 5-45 (118)
266 1y81_A Conserved hypothetical 97.7 5.2E-05 1.8E-09 69.4 7.4 86 308-426 14-104 (138)
267 3fwz_A Inner membrane protein 97.7 0.00015 5.1E-09 66.4 10.6 96 309-420 8-103 (140)
268 4gm2_A ATP-dependent CLP prote 97.7 0.00014 4.9E-09 70.5 9.8 141 27-186 36-204 (205)
269 2hmt_A YUAA protein; RCK, KTN, 97.6 0.00013 4.3E-09 66.7 8.3 39 308-346 6-44 (144)
270 2rir_A Dipicolinate synthase, 97.6 6E-05 2.1E-09 78.7 6.8 86 309-421 158-244 (300)
271 2g1u_A Hypothetical protein TM 97.6 0.00013 4.4E-09 68.1 8.4 38 309-346 20-57 (155)
272 3d4o_A Dipicolinate synthase s 97.6 7.2E-05 2.5E-09 77.8 7.2 86 309-421 156-242 (293)
273 2hk9_A Shikimate dehydrogenase 97.6 3.8E-05 1.3E-09 79.2 4.7 67 309-398 130-197 (275)
274 3bf0_A Protease 4; bacterial, 97.6 0.00026 8.8E-09 80.8 12.0 144 32-194 71-271 (593)
275 2duw_A Putative COA-binding pr 97.6 7.5E-05 2.6E-09 69.0 5.7 101 309-443 14-122 (145)
276 1o6z_A MDH, malate dehydrogena 97.4 0.00031 1.1E-08 73.3 9.3 106 310-432 2-126 (303)
277 1smk_A Malate dehydrogenase, g 97.4 0.00025 8.6E-09 74.8 8.6 101 309-430 9-130 (326)
278 1mld_A Malate dehydrogenase; o 97.4 0.00045 1.5E-08 72.4 10.4 92 310-419 2-114 (314)
279 3d64_A Adenosylhomocysteinase; 97.4 7.8E-05 2.7E-09 82.3 4.6 88 309-425 278-366 (494)
280 1v8b_A Adenosylhomocysteinase; 97.4 6.7E-05 2.3E-09 82.5 3.9 88 309-425 258-346 (479)
281 3ce6_A Adenosylhomocysteinase; 97.4 0.0002 6.8E-09 79.3 7.0 86 309-423 275-361 (494)
282 2d5c_A AROE, shikimate 5-dehyd 97.4 0.00024 8.2E-09 72.6 7.1 64 310-398 118-182 (263)
283 3e9m_A Oxidoreductase, GFO/IDH 97.3 0.00052 1.8E-08 72.5 9.7 100 306-432 3-108 (330)
284 3l4b_C TRKA K+ channel protien 97.3 0.00087 3E-08 66.2 10.4 94 310-420 2-97 (218)
285 3q2i_A Dehydrogenase; rossmann 97.3 0.00093 3.2E-08 71.3 11.3 72 306-400 11-88 (354)
286 1up7_A 6-phospho-beta-glucosid 97.3 0.00081 2.8E-08 73.1 10.7 72 309-395 3-81 (417)
287 3kb6_A D-lactate dehydrogenase 97.3 0.0002 6.9E-09 75.7 5.6 100 309-436 142-245 (334)
288 1x7d_A Ornithine cyclodeaminas 97.3 0.00039 1.3E-08 73.9 7.5 95 309-424 130-227 (350)
289 3h9u_A Adenosylhomocysteinase; 97.2 0.00018 6.1E-09 77.8 4.8 86 309-424 212-298 (436)
290 3qy9_A DHPR, dihydrodipicolina 97.2 0.00064 2.2E-08 68.2 8.5 87 307-429 2-89 (243)
291 3uuw_A Putative oxidoreductase 97.2 0.00068 2.3E-08 70.9 9.1 98 307-432 5-107 (308)
292 2f9i_B Acetyl-coenzyme A carbo 97.2 0.0057 1.9E-07 62.6 15.7 147 20-198 127-278 (285)
293 1b8p_A Protein (malate dehydro 97.2 0.00046 1.6E-08 72.9 7.8 98 309-420 6-130 (329)
294 3euw_A MYO-inositol dehydrogen 97.2 0.0011 3.6E-08 70.5 10.3 97 308-431 4-105 (344)
295 1tlt_A Putative oxidoreductase 97.2 0.00063 2.1E-08 71.5 8.3 96 307-430 4-104 (319)
296 3u62_A Shikimate dehydrogenase 97.1 0.00012 4E-09 74.3 2.0 37 310-346 110-147 (253)
297 3n6r_B Propionyl-COA carboxyla 97.1 0.0068 2.3E-07 67.2 16.1 137 25-201 118-263 (531)
298 2dc1_A L-aspartate dehydrogena 97.1 0.00045 1.5E-08 69.3 6.0 77 310-423 2-81 (236)
299 3iav_A Propionyl-COA carboxyla 97.1 0.0075 2.6E-07 66.9 16.2 146 17-200 100-258 (530)
300 3gvp_A Adenosylhomocysteinase 97.1 0.0013 4.6E-08 70.8 9.8 87 309-425 221-308 (435)
301 3p2y_A Alanine dehydrogenase/p 97.1 0.00019 6.5E-09 76.5 3.2 104 309-423 185-302 (381)
302 1id1_A Putative potassium chan 97.1 0.0022 7.5E-08 59.4 10.1 38 309-346 4-42 (153)
303 1omo_A Alanine dehydrogenase; 97.1 0.00071 2.4E-08 71.2 7.2 70 309-398 126-198 (322)
304 3u95_A Glycoside hydrolase, fa 97.1 0.00093 3.2E-08 74.0 8.4 74 310-395 2-84 (477)
305 4dio_A NAD(P) transhydrogenase 97.1 0.00027 9.3E-09 75.9 3.9 39 309-347 191-229 (405)
306 3phh_A Shikimate dehydrogenase 97.1 0.00067 2.3E-08 69.1 6.6 65 309-398 119-183 (269)
307 3ulk_A Ketol-acid reductoisome 97.0 0.001 3.5E-08 71.1 7.9 151 309-482 38-201 (491)
308 3n58_A Adenosylhomocysteinase; 97.0 0.00087 3E-08 72.3 7.4 88 309-426 248-336 (464)
309 3hdj_A Probable ornithine cycl 97.0 0.00044 1.5E-08 72.4 5.0 91 309-425 122-215 (313)
310 2z2v_A Hypothetical protein PH 97.0 0.00058 2E-08 73.1 6.0 87 309-421 17-106 (365)
311 2egg_A AROE, shikimate 5-dehyd 97.0 0.00052 1.8E-08 71.4 5.4 39 309-347 142-181 (297)
312 1on3_A Methylmalonyl-COA carbo 97.0 0.0085 2.9E-07 66.6 15.5 139 25-199 108-254 (523)
313 2vhw_A Alanine dehydrogenase; 97.0 0.00023 8E-09 76.7 2.6 92 309-422 169-267 (377)
314 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0026 8.8E-08 66.9 10.4 69 309-399 3-75 (323)
315 2eez_A Alanine dehydrogenase; 97.0 0.00073 2.5E-08 72.6 6.1 97 309-421 167-264 (369)
316 3u9r_B MCC beta, methylcrotony 97.0 0.025 8.6E-07 63.0 18.4 141 25-200 134-282 (555)
317 3db2_A Putative NADPH-dependen 96.9 0.0027 9.1E-08 67.7 10.4 96 309-432 6-107 (354)
318 1x0u_A Hypothetical methylmalo 96.9 0.012 4.2E-07 65.4 15.8 140 25-200 104-253 (522)
319 3rc1_A Sugar 3-ketoreductase; 96.9 0.0021 7.2E-08 68.5 9.4 100 305-432 24-130 (350)
320 2bzr_A Propionyl-COA carboxyla 96.9 0.012 3.9E-07 65.8 15.6 135 25-197 121-266 (548)
321 4hkt_A Inositol 2-dehydrogenas 96.9 0.0026 8.8E-08 67.1 9.7 96 309-432 4-104 (331)
322 2ho3_A Oxidoreductase, GFO/IDH 96.9 0.0021 7.3E-08 67.6 9.1 95 309-430 2-101 (325)
323 3ezy_A Dehydrogenase; structur 96.9 0.0018 6E-08 68.8 8.4 97 309-432 3-105 (344)
324 1npy_A Hypothetical shikimate 96.9 0.002 6.9E-08 65.9 8.4 39 309-347 120-159 (271)
325 1hye_A L-lactate/malate dehydr 96.9 0.0036 1.2E-07 65.5 10.5 97 310-420 2-119 (313)
326 1p77_A Shikimate 5-dehydrogena 96.9 0.0012 4E-08 67.8 6.5 40 309-348 120-159 (272)
327 3o8q_A Shikimate 5-dehydrogena 96.9 0.0011 3.7E-08 68.2 6.1 41 309-349 127-168 (281)
328 1leh_A Leucine dehydrogenase; 96.8 0.0021 7E-08 68.5 8.2 39 309-347 174-212 (364)
329 3e18_A Oxidoreductase; dehydro 96.8 0.0023 7.7E-08 68.5 8.6 97 307-432 4-106 (359)
330 3hhp_A Malate dehydrogenase; M 96.8 0.0025 8.5E-08 66.5 8.6 95 309-421 1-116 (312)
331 3cea_A MYO-inositol 2-dehydrog 96.8 0.0042 1.4E-07 65.8 10.6 72 307-400 7-84 (346)
332 1nyt_A Shikimate 5-dehydrogena 96.8 0.0021 7.3E-08 65.8 7.9 39 309-347 120-158 (271)
333 1iuk_A Hypothetical protein TT 96.8 0.0029 1E-07 57.8 7.8 103 309-443 14-122 (140)
334 4h7p_A Malate dehydrogenase; s 96.7 0.0016 5.6E-08 68.7 6.5 103 309-423 25-150 (345)
335 3c1a_A Putative oxidoreductase 96.7 0.0023 8E-08 67.0 7.5 92 309-430 11-108 (315)
336 2glx_A 1,5-anhydro-D-fructose 96.7 0.0056 1.9E-07 64.5 10.2 69 310-400 2-75 (332)
337 3evn_A Oxidoreductase, GFO/IDH 96.7 0.0015 5E-08 69.0 5.5 100 306-432 3-108 (329)
338 3don_A Shikimate dehydrogenase 96.7 0.00029 9.8E-09 72.3 -0.0 38 309-346 118-156 (277)
339 3ec7_A Putative dehydrogenase; 96.6 0.0035 1.2E-07 66.9 8.4 98 307-431 22-127 (357)
340 3ond_A Adenosylhomocysteinase; 96.6 0.0035 1.2E-07 68.8 8.3 87 309-423 266-352 (488)
341 3l9w_A Glutathione-regulated p 96.6 0.0072 2.5E-07 65.7 10.7 39 309-347 5-43 (413)
342 2d59_A Hypothetical protein PH 96.6 0.0065 2.2E-07 55.8 8.8 101 309-443 23-129 (144)
343 3mz0_A Inositol 2-dehydrogenas 96.6 0.0046 1.6E-07 65.5 9.0 96 309-431 3-106 (344)
344 3m2t_A Probable dehydrogenase; 96.6 0.0023 8E-08 68.3 6.7 99 307-432 4-109 (359)
345 1jw9_B Molybdopterin biosynthe 96.6 0.0028 9.5E-08 64.0 6.8 33 309-341 32-65 (249)
346 3jyo_A Quinate/shikimate dehyd 96.6 0.0021 7E-08 66.2 5.7 42 309-350 128-170 (283)
347 3pwz_A Shikimate dehydrogenase 96.5 0.0043 1.5E-07 63.4 7.9 40 309-348 121-161 (272)
348 1gpj_A Glutamyl-tRNA reductase 96.5 0.0021 7.2E-08 69.8 5.3 70 309-399 168-239 (404)
349 3bio_A Oxidoreductase, GFO/IDH 96.5 0.0061 2.1E-07 63.5 8.6 84 308-421 9-94 (304)
350 1x0u_A Hypothetical methylmalo 96.5 0.019 6.5E-07 63.8 12.9 164 18-201 329-506 (522)
351 2p2s_A Putative oxidoreductase 96.4 0.0052 1.8E-07 64.9 7.8 72 308-401 4-80 (336)
352 1nvt_A Shikimate 5'-dehydrogen 96.3 0.0053 1.8E-07 63.4 7.0 74 309-396 129-202 (287)
353 3fbt_A Chorismate mutase and s 96.3 0.0036 1.2E-07 64.2 5.6 39 309-347 123-162 (282)
354 3abi_A Putative uncharacterize 96.3 0.0045 1.5E-07 66.2 6.6 69 309-398 17-88 (365)
355 1x13_A NAD(P) transhydrogenase 96.3 0.0018 6.2E-08 70.2 3.4 39 309-347 173-211 (401)
356 1pjc_A Protein (L-alanine dehy 96.2 0.003 1E-07 67.6 4.6 40 309-348 168-207 (361)
357 1vrg_A Propionyl-COA carboxyla 96.1 0.074 2.5E-06 59.1 15.4 137 25-197 111-256 (527)
358 3tnl_A Shikimate dehydrogenase 96.1 0.0032 1.1E-07 65.7 4.2 41 309-349 155-199 (315)
359 1ydw_A AX110P-like protein; st 96.1 0.016 5.3E-07 61.9 9.7 99 308-430 6-110 (362)
360 3upl_A Oxidoreductase; rossman 96.1 0.01 3.5E-07 64.5 8.2 153 309-487 24-190 (446)
361 5mdh_A Malate dehydrogenase; o 96.1 0.0021 7.2E-08 67.7 2.8 95 309-417 4-123 (333)
362 3tum_A Shikimate dehydrogenase 96.1 0.014 4.7E-07 59.5 8.5 70 309-396 126-196 (269)
363 1l7d_A Nicotinamide nucleotide 96.1 0.0034 1.2E-07 67.7 4.2 39 309-347 173-211 (384)
364 1ff9_A Saccharopine reductase; 96.1 0.003 1E-07 69.5 3.9 39 308-346 3-41 (450)
365 3ius_A Uncharacterized conserv 96.1 0.015 5.2E-07 59.4 9.0 39 308-346 5-43 (286)
366 4ina_A Saccharopine dehydrogen 96.0 0.012 4.1E-07 63.9 8.1 43 308-350 1-46 (405)
367 1h6d_A Precursor form of gluco 96.0 0.022 7.7E-07 62.3 10.4 77 306-400 81-163 (433)
368 2aef_A Calcium-gated potassium 96.0 0.0082 2.8E-07 59.7 6.2 38 309-347 10-47 (234)
369 4had_A Probable oxidoreductase 95.9 0.011 3.6E-07 62.8 7.4 74 306-401 21-100 (350)
370 7mdh_A Protein (malate dehydro 95.9 0.013 4.6E-07 62.2 8.0 105 309-423 33-158 (375)
371 3r6d_A NAD-dependent epimerase 95.9 0.011 3.7E-07 58.1 6.9 39 308-346 5-46 (221)
372 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.038 1.3E-06 54.4 10.5 130 309-478 32-163 (223)
373 3ohs_X Trans-1,2-dihydrobenzen 95.9 0.017 5.8E-07 60.8 8.5 97 309-432 3-107 (334)
374 3e8x_A Putative NAD-dependent 95.8 0.051 1.8E-06 53.7 11.5 38 309-346 22-60 (236)
375 3u3x_A Oxidoreductase; structu 95.8 0.044 1.5E-06 58.3 11.5 97 309-432 27-129 (361)
376 4f3y_A DHPR, dihydrodipicolina 95.8 0.0023 7.7E-08 65.4 1.2 101 307-429 6-110 (272)
377 3t4e_A Quinate/shikimate dehyd 95.8 0.011 3.9E-07 61.4 6.4 40 309-348 149-192 (312)
378 1vrg_A Propionyl-COA carboxyla 95.8 0.1 3.4E-06 58.1 14.3 161 21-201 337-511 (527)
379 3gdo_A Uncharacterized oxidore 95.7 0.01 3.6E-07 63.2 6.3 70 307-401 4-79 (358)
380 1dih_A Dihydrodipicolinate red 95.7 0.0071 2.4E-07 61.8 4.4 35 308-342 5-42 (273)
381 4a26_A Putative C-1-tetrahydro 95.7 0.009 3.1E-07 61.2 5.1 74 309-424 166-240 (300)
382 4g65_A TRK system potassium up 95.7 0.018 6.1E-07 63.6 7.9 40 309-348 4-43 (461)
383 2axq_A Saccharopine dehydrogen 95.6 0.0077 2.6E-07 66.5 4.8 41 307-347 22-63 (467)
384 3e82_A Putative oxidoreductase 95.6 0.012 4.2E-07 62.8 6.3 70 307-401 6-81 (364)
385 1f06_A MESO-diaminopimelate D- 95.6 0.0084 2.9E-07 62.9 4.9 91 309-431 4-98 (320)
386 3ngx_A Bifunctional protein fo 95.6 0.0064 2.2E-07 61.5 3.7 72 309-424 151-223 (276)
387 4gqa_A NAD binding oxidoreduct 95.6 0.011 3.7E-07 64.4 5.8 70 310-401 28-110 (412)
388 3h2s_A Putative NADH-flavin re 95.6 0.0048 1.6E-07 60.6 2.5 37 310-346 2-39 (224)
389 2ixa_A Alpha-N-acetylgalactosa 95.5 0.02 6.9E-07 62.9 7.6 77 307-400 19-104 (444)
390 1zud_1 Adenylyltransferase THI 95.4 0.036 1.2E-06 55.8 8.7 33 309-341 29-62 (251)
391 3ew7_A LMO0794 protein; Q8Y8U8 95.4 0.021 7.2E-07 55.7 6.7 37 310-346 2-39 (221)
392 1a4i_A Methylenetetrahydrofola 95.4 0.014 4.9E-07 59.7 5.5 72 309-424 166-238 (301)
393 3btv_A Galactose/lactose metab 95.4 0.039 1.3E-06 60.5 9.2 72 308-399 20-101 (438)
394 3eag_A UDP-N-acetylmuramate:L- 95.3 0.031 1.1E-06 58.7 8.1 36 307-342 3-39 (326)
395 3dhn_A NAD-dependent epimerase 95.3 0.0086 2.9E-07 58.9 3.4 37 308-344 4-41 (227)
396 3moi_A Probable dehydrogenase; 95.3 0.028 9.5E-07 60.5 7.6 69 309-400 3-77 (387)
397 3fhl_A Putative oxidoreductase 95.3 0.014 4.8E-07 62.2 5.2 71 306-401 3-79 (362)
398 2b0j_A 5,10-methenyltetrahydro 95.2 0.15 5E-06 51.0 11.8 110 375-487 128-242 (358)
399 1lu9_A Methylene tetrahydromet 95.2 0.031 1E-06 57.5 7.5 41 309-349 120-161 (287)
400 3p2o_A Bifunctional protein fo 95.2 0.018 6.3E-07 58.5 5.6 72 309-424 161-233 (285)
401 2yyy_A Glyceraldehyde-3-phosph 95.2 0.075 2.6E-06 56.0 10.5 108 309-425 3-115 (343)
402 1edz_A 5,10-methylenetetrahydr 95.1 0.018 6.2E-07 59.8 5.1 91 309-426 178-278 (320)
403 3qvo_A NMRA family protein; st 95.1 0.0089 3E-07 59.5 2.8 41 305-345 20-62 (236)
404 1on3_A Methylmalonyl-COA carbo 95.1 0.17 5.7E-06 56.3 13.2 162 20-201 332-507 (523)
405 3l07_A Bifunctional protein fo 95.0 0.018 6.2E-07 58.5 4.9 71 309-423 162-233 (285)
406 3l6e_A Oxidoreductase, short-c 95.0 0.024 8.2E-07 56.4 5.6 42 308-349 3-45 (235)
407 1y7t_A Malate dehydrogenase; N 95.0 0.057 1.9E-06 56.6 8.8 33 309-341 5-45 (327)
408 1b0a_A Protein (fold bifunctio 95.0 0.012 4E-07 60.0 3.2 71 309-423 160-231 (288)
409 2vt3_A REX, redox-sensing tran 95.0 0.0063 2.1E-07 59.8 1.2 78 309-411 86-167 (215)
410 4fgs_A Probable dehydrogenase 95.0 0.017 5.6E-07 59.0 4.4 41 310-350 30-72 (273)
411 1zh8_A Oxidoreductase; TM0312, 94.9 0.033 1.1E-06 58.8 6.8 71 308-400 18-95 (340)
412 3gf3_A Glutaconyl-COA decarbox 94.9 0.36 1.2E-05 54.1 15.3 160 25-197 119-286 (588)
413 4hv4_A UDP-N-acetylmuramate--L 94.9 0.096 3.3E-06 58.3 10.8 38 305-342 19-57 (494)
414 3dty_A Oxidoreductase, GFO/IDH 94.9 0.031 1.1E-06 60.4 6.6 75 307-401 11-99 (398)
415 1pix_A Glutaconyl-COA decarbox 94.9 0.12 4E-06 58.1 11.3 157 26-204 385-563 (587)
416 4g81_D Putative hexonate dehyd 94.7 0.027 9.2E-07 56.9 5.3 82 309-395 9-94 (255)
417 3v5n_A Oxidoreductase; structu 94.7 0.037 1.3E-06 60.2 6.8 73 309-401 38-124 (417)
418 2nvw_A Galactose/lactose metab 94.7 0.07 2.4E-06 59.1 9.1 73 307-399 38-120 (479)
419 2bzr_A Propionyl-COA carboxyla 94.7 0.2 7E-06 55.8 12.7 160 20-199 353-530 (548)
420 4a5o_A Bifunctional protein fo 94.7 0.021 7.1E-07 58.0 4.3 72 309-424 162-234 (286)
421 2c2x_A Methylenetetrahydrofola 94.6 0.024 8.1E-07 57.5 4.4 71 309-423 159-232 (281)
422 3kux_A Putative oxidoreductase 94.6 0.031 1.1E-06 59.3 5.6 68 309-401 8-81 (352)
423 4fn4_A Short chain dehydrogena 94.6 0.034 1.2E-06 56.0 5.6 42 310-351 8-51 (254)
424 3fpf_A Mtnas, putative unchara 94.5 0.18 6.3E-06 51.7 10.9 95 309-422 124-221 (298)
425 3l77_A Short-chain alcohol deh 94.5 0.063 2.2E-06 53.0 7.3 44 308-351 2-46 (235)
426 4gmf_A Yersiniabactin biosynth 94.4 0.053 1.8E-06 57.9 7.0 67 309-399 8-78 (372)
427 3n6r_B Propionyl-COA carboxyla 94.4 0.28 9.4E-06 54.4 12.7 159 18-196 342-510 (531)
428 1nvm_B Acetaldehyde dehydrogen 94.4 0.066 2.3E-06 55.7 7.5 35 309-343 5-42 (312)
429 3iav_A Propionyl-COA carboxyla 94.4 0.35 1.2E-05 53.6 13.5 163 17-200 335-513 (530)
430 2gas_A Isoflavone reductase; N 94.4 0.042 1.4E-06 56.6 5.9 34 308-341 2-36 (307)
431 3ai3_A NADPH-sorbose reductase 94.3 0.075 2.6E-06 53.6 7.5 42 309-350 8-50 (263)
432 3f1l_A Uncharacterized oxidore 94.3 0.074 2.5E-06 53.3 7.4 43 309-351 13-56 (252)
433 3c1o_A Eugenol synthase; pheny 94.3 0.055 1.9E-06 56.2 6.6 34 308-341 4-38 (321)
434 2wsb_A Galactitol dehydrogenas 94.3 0.042 1.4E-06 55.0 5.4 40 309-348 12-52 (254)
435 3ff4_A Uncharacterized protein 94.2 0.054 1.8E-06 48.0 5.4 81 308-420 4-88 (122)
436 2z1n_A Dehydrogenase; reductas 94.2 0.071 2.4E-06 53.7 7.1 41 309-349 8-49 (260)
437 3dqp_A Oxidoreductase YLBE; al 94.2 0.13 4.6E-06 50.0 8.9 35 310-344 2-37 (219)
438 3lk7_A UDP-N-acetylmuramoylala 94.2 0.14 4.7E-06 56.3 9.9 35 308-342 9-43 (451)
439 3k8x_A Acetyl-COA carboxylase; 94.1 0.13 4.5E-06 58.7 9.4 81 97-202 245-333 (758)
440 4b4o_A Epimerase family protei 94.1 0.056 1.9E-06 55.5 6.0 34 309-342 1-35 (298)
441 3f4l_A Putative oxidoreductase 94.1 0.017 5.7E-07 61.2 2.0 70 309-401 3-79 (345)
442 4dry_A 3-oxoacyl-[acyl-carrier 94.0 0.064 2.2E-06 54.9 6.2 42 310-351 35-77 (281)
443 4e6p_A Probable sorbitol dehyd 94.0 0.048 1.6E-06 55.0 5.2 41 309-349 9-50 (259)
444 1vl8_A Gluconate 5-dehydrogena 93.9 0.083 2.8E-06 53.5 7.0 42 309-350 22-64 (267)
445 1y1p_A ARII, aldehyde reductas 93.9 0.26 8.9E-06 51.3 11.0 39 309-347 12-51 (342)
446 3dr3_A N-acetyl-gamma-glutamyl 93.9 0.074 2.5E-06 55.8 6.7 100 308-428 4-111 (337)
447 3h8v_A Ubiquitin-like modifier 93.9 0.16 5.6E-06 52.0 9.0 33 309-341 37-70 (292)
448 2r6j_A Eugenol synthase 1; phe 93.9 0.043 1.5E-06 57.0 4.8 34 309-342 12-46 (318)
449 3ruf_A WBGU; rossmann fold, UD 93.9 0.045 1.5E-06 57.6 5.0 35 308-342 25-60 (351)
450 2ehd_A Oxidoreductase, oxidore 93.9 0.04 1.4E-06 54.5 4.2 39 309-347 6-45 (234)
451 1uls_A Putative 3-oxoacyl-acyl 93.9 0.057 2E-06 53.9 5.5 39 309-347 6-45 (245)
452 4ibo_A Gluconate dehydrogenase 93.8 0.04 1.4E-06 56.1 4.3 42 310-351 28-70 (271)
453 3dii_A Short-chain dehydrogena 93.8 0.026 8.8E-07 56.6 2.9 39 309-347 3-42 (247)
454 1cf2_P Protein (glyceraldehyde 93.8 0.14 4.9E-06 53.7 8.7 37 309-345 2-40 (337)
455 2nwq_A Probable short-chain de 93.8 0.067 2.3E-06 54.4 6.0 41 309-349 22-63 (272)
456 3ioy_A Short-chain dehydrogena 93.8 0.091 3.1E-06 54.8 7.2 43 309-351 9-52 (319)
457 3nyw_A Putative oxidoreductase 93.8 0.057 1.9E-06 54.2 5.4 43 309-351 8-51 (250)
458 3tfo_A Putative 3-oxoacyl-(acy 93.8 0.055 1.9E-06 54.9 5.3 42 310-351 6-48 (264)
459 3o38_A Short chain dehydrogena 93.8 0.046 1.6E-06 55.3 4.6 41 309-349 23-65 (266)
460 1qyc_A Phenylcoumaran benzylic 93.8 0.065 2.2E-06 55.2 5.9 34 308-341 4-38 (308)
461 3i6i_A Putative leucoanthocyan 93.7 0.1 3.4E-06 55.0 7.4 35 307-341 9-44 (346)
462 3kkj_A Amine oxidase, flavin-c 93.7 0.033 1.1E-06 55.1 3.5 32 310-341 4-35 (336)
463 3awd_A GOX2181, putative polyo 93.7 0.073 2.5E-06 53.4 6.0 41 309-349 14-55 (260)
464 3lf2_A Short chain oxidoreduct 93.7 0.095 3.2E-06 53.0 6.8 43 309-351 9-52 (265)
465 1nff_A Putative oxidoreductase 93.7 0.052 1.8E-06 54.8 4.9 39 309-347 8-47 (260)
466 1iy8_A Levodione reductase; ox 93.7 0.074 2.5E-06 53.8 6.0 42 309-350 14-56 (267)
467 2jah_A Clavulanic acid dehydro 93.7 0.071 2.4E-06 53.3 5.8 41 309-349 8-49 (247)
468 3qiv_A Short-chain dehydrogena 93.7 0.085 2.9E-06 52.8 6.4 43 309-351 10-53 (253)
469 3pk0_A Short-chain dehydrogena 93.7 0.061 2.1E-06 54.3 5.3 41 310-350 12-53 (262)
470 3gem_A Short chain dehydrogena 93.7 0.043 1.5E-06 55.5 4.2 37 309-345 28-65 (260)
471 1xg5_A ARPG836; short chain de 93.7 0.069 2.4E-06 54.4 5.8 41 309-349 33-74 (279)
472 2pnf_A 3-oxoacyl-[acyl-carrier 93.7 0.098 3.4E-06 51.9 6.8 41 309-349 8-49 (248)
473 3asu_A Short-chain dehydrogena 93.6 0.082 2.8E-06 52.9 6.2 40 310-349 2-42 (248)
474 1yb1_A 17-beta-hydroxysteroid 93.6 0.085 2.9E-06 53.5 6.4 40 309-348 32-72 (272)
475 3oh8_A Nucleoside-diphosphate 93.6 0.071 2.4E-06 59.7 6.3 36 308-343 147-183 (516)
476 3ucx_A Short chain dehydrogena 93.6 0.085 2.9E-06 53.3 6.3 42 309-350 12-54 (264)
477 1geg_A Acetoin reductase; SDR 93.5 0.084 2.9E-06 53.0 6.0 41 309-349 3-44 (256)
478 2rhc_B Actinorhodin polyketide 93.5 0.085 2.9E-06 53.8 6.1 42 309-350 23-65 (277)
479 3svt_A Short-chain type dehydr 93.5 0.058 2E-06 55.1 4.8 42 309-350 12-54 (281)
480 1yde_A Retinal dehydrogenase/r 93.5 0.055 1.9E-06 55.0 4.6 39 309-347 10-49 (270)
481 3oa2_A WBPB; oxidoreductase, s 93.4 0.054 1.8E-06 56.6 4.6 36 308-343 3-40 (318)
482 1w6u_A 2,4-dienoyl-COA reducta 93.4 0.13 4.3E-06 53.0 7.4 43 309-351 27-70 (302)
483 3o9z_A Lipopolysaccaride biosy 93.4 0.067 2.3E-06 55.7 5.2 36 308-343 3-40 (312)
484 1c1d_A L-phenylalanine dehydro 93.4 0.14 4.9E-06 53.9 7.7 35 309-343 176-210 (355)
485 4fb5_A Probable oxidoreductase 93.4 0.081 2.8E-06 56.6 6.0 70 310-401 27-108 (393)
486 4fc7_A Peroxisomal 2,4-dienoyl 93.4 0.11 3.9E-06 52.8 6.8 43 309-351 28-71 (277)
487 3ftp_A 3-oxoacyl-[acyl-carrier 93.3 0.1 3.5E-06 53.0 6.4 42 310-351 29-72 (270)
488 3ijp_A DHPR, dihydrodipicolina 93.3 0.081 2.8E-06 54.1 5.5 98 309-427 22-123 (288)
489 3ged_A Short-chain dehydrogena 93.3 0.27 9.3E-06 49.1 9.3 38 309-346 2-41 (247)
490 2ae2_A Protein (tropinone redu 93.3 0.13 4.5E-06 51.7 7.1 41 309-349 10-51 (260)
491 3r1i_A Short-chain type dehydr 93.3 0.062 2.1E-06 54.8 4.6 42 309-350 33-75 (276)
492 1qyd_A Pinoresinol-lariciresin 93.3 0.093 3.2E-06 54.1 6.0 34 308-341 4-38 (313)
493 2ejw_A HDH, homoserine dehydro 93.3 0.057 1.9E-06 56.6 4.4 63 309-398 4-77 (332)
494 1xhl_A Short-chain dehydrogena 93.2 0.074 2.5E-06 54.9 5.2 40 310-349 28-68 (297)
495 3lyl_A 3-oxoacyl-(acyl-carrier 93.2 0.094 3.2E-06 52.2 5.8 41 309-349 6-47 (247)
496 3cxt_A Dehydrogenase with diff 93.2 0.094 3.2E-06 53.9 5.9 41 309-349 35-76 (291)
497 2czc_A Glyceraldehyde-3-phosph 93.2 0.14 4.8E-06 53.8 7.3 85 309-400 3-92 (334)
498 3rwb_A TPLDH, pyridoxal 4-dehy 93.2 0.088 3E-06 52.6 5.5 41 309-349 7-48 (247)
499 2b4q_A Rhamnolipids biosynthes 93.2 0.075 2.6E-06 54.2 5.1 41 309-349 30-71 (276)
500 4egf_A L-xylulose reductase; s 93.1 0.084 2.9E-06 53.4 5.3 42 310-351 22-64 (266)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=6.6e-134 Score=1168.03 Aligned_cols=695 Identities=34% Similarity=0.547 Sum_probs=619.8
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHH
Q 004726 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (733)
Q Consensus 8 ~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (733)
++. +|+|++||||||+.|+||.+|+++|.++++++++|+++|+|||||+|+.||+|+||+++...... ....
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-------~~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-------LALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-------SHHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-------HHHH
Confidence 445 78999999999999999999999999999999999999999999999999999999998654321 1234
Q ss_pred HHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCC
Q 004726 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167 (733)
Q Consensus 88 ~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~ 167 (733)
+++ ++|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|||++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 666 6799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchHHHHH
Q 004726 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247 (733)
Q Consensus 168 ~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 247 (733)
+++|+||+++||||+|+|++. .+++.++|++++.+++...+..... ..........+.......+++.++|+|+.++
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKP--VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSC--CCCCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhccc--ccccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998765 5788999999999887654433222 2222222334444555667788899999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCCC---CCCCCCCCCcceEEEEcCCcCcHHHH
Q 004726 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV---TDIGLKPRGVRKVAVIGGGLMGSGIA 324 (733)
Q Consensus 248 ~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~~---~~~~~~~~~~~kI~VIG~G~mG~~iA 324 (733)
+++++.+...+++++++.|++.|..++.|+++++++++|+++|+++|.+.. ...+..+++|+||+|||+|+||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 999999999999999999999999999999999999999999999886542 12345577899999999999999999
Q ss_pred HHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCCEEEEeccCChHHHHH
Q 004726 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404 (733)
Q Consensus 325 ~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI~avpe~~~~k~~ 404 (733)
..++++|++|+++|++++.++++.+.+...++..+.++..+.. .....++..+++++.+++||+|||||||++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999999888887776554432 22345788888899999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004726 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484 (733)
Q Consensus 405 v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v 484 (733)
+|+++++++++++|++||||+++++++++.+.+|+||+|+|||||++.+++||||+++.|++++++.+.++++.+||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcchhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCCC-------
Q 004726 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR------- 557 (733)
Q Consensus 485 ~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv~~~dID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~------- 557 (733)
+++|+||||+||++.++++||++++++|+++++||.++..+|+|||||+++|++|||+.+++.+.+....++.
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~ 570 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVR 570 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTT
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhh
Confidence 9999999999999999999999999999999999999988999999999999999999999999876543321
Q ss_pred ----CCCcHHHHHHHHcCCCCcccCccccccCCCC--CCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHH
Q 004726 558 ----SFQSPLVDLLLKSGRNGKANGKGLYTYEKGS--KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 631 (733)
Q Consensus 558 ----~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 631 (733)
..+++++++|+++|++|+|||+|||+|++++ ...+|+++..++...+....+.+ ..++.++|.+|+++++
T Consensus 571 ~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ei~~R~l~~~ 646 (742)
T 3zwc_A 571 KRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSL 646 (742)
T ss_dssp EETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTCSCEECCHHHHHHHHHHHHHHTCCC----CCCCHHHHHHHHHHHH
T ss_pred hcccccccHHHHHHHHCCCccccCCCeeEECCCCCCccCCCChHHHHHHHHHhhhcCCCc----CCCCHHHHHHHHHHHH
Confidence 1146799999999999999999999997643 24577777777766555444332 3578899999999999
Q ss_pred HHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHHHHCCCC
Q 004726 632 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIP 709 (733)
Q Consensus 632 ~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~~ 709 (733)
+||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++++++.+|+ +|+|+++|++|+++|..
T Consensus 647 ~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~ 726 (742)
T 3zwc_A 647 INEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 726 (742)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCC
T ss_pred HHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999995 89999999999999987
Q ss_pred c--cccceeecCC
Q 004726 710 L--VRIIFHRFSN 720 (733)
Q Consensus 710 g--~g~gfy~y~~ 720 (733)
+ .++|||.|..
T Consensus 727 ~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 727 PLKEWQSLAGPHG 739 (742)
T ss_dssp CGGGHHHHHSTTC
T ss_pred cccccccccCCCC
Confidence 6 5789998864
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=6.5e-125 Score=1101.00 Aligned_cols=703 Identities=58% Similarity=0.962 Sum_probs=592.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-cccCCCCchhhhhccCCC--
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (733)
|+++.++++..+++|++||||||+.|+||.+|+++|.++++.++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 66778999833789999999999889999999999999999999999999999999 76 999999999885422110
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
....+....++++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222233444 468899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccC-ch--hhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-KP--WIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
+|++|++||++++|+||+++||||+|||++++++++.++|++++..+ |. ..+. + ............+..++...
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK--T-DKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGC--C-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhh--c-cccCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998862 22 2210 0 01112222233555556655
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcceEEEE
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~~~~~~~~~~~~~kI~VI 314 (733)
++..+.|||+..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++....+..+++|+||+||
T Consensus 239 ~~~~~g~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~VI 318 (725)
T 2wtb_A 239 LKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAII 318 (725)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEEE
T ss_pred HHhccCCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEEE
Confidence 44334499999999999999999999999999999999999999999999999999999988632113345678999999
Q ss_pred cCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCCEEEEe
Q 004726 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394 (733)
Q Consensus 315 G~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI~a 394 (733)
|+|.||++||..++++|++|++||++++.++++.+.+++.+++++++|.+++.+.....++++.+++++++++||+||+|
T Consensus 319 GaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIea 398 (725)
T 2wtb_A 319 GGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEA 398 (725)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEEC
T ss_pred cCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEEc
Confidence 99999999999999999999999999999999988899999999999999888888888899999999889999999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHHHHHHHHH
Q 004726 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474 (733)
Q Consensus 395 vpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~ 474 (733)
|||+.++|+.+++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|+++++.|++++++.+.+
T Consensus 399 Vpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~ 478 (725)
T 2wtb_A 399 VIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLD 478 (725)
T ss_dssp CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred HHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004726 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (733)
Q Consensus 475 l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv~~~dID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (733)
+++.+|+.|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.+
T Consensus 479 l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~~ 558 (725)
T 2wtb_A 479 VGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIENF 558 (725)
T ss_dssp HHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred HHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999998
Q ss_pred CCC-CCCcHHHHHHHHcCCCCcccCccccccCCCCCCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHHH
Q 004726 555 PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 633 (733)
Q Consensus 555 ~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 633 (733)
+++ +.| +++++|+++|++|+|||+|||+|++.++..+|+++..++...+....+.+..+...+++++|++|++++++|
T Consensus 559 ~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~n 637 (725)
T 2wtb_A 559 SERTYKS-MIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVN 637 (725)
T ss_dssp GGGCCCC-THHHHHHTTC---------------------CCCCCTTSHHHHHHTCCSCCCTTTTCCHHHHHHHHHHHHHH
T ss_pred CCccCCh-HHHHHHHHCCCceecCCceeEeCCCCccCCCCHHHHHHHHhhhhhccccchhhcccCCHHHHHHHHHHHHHH
Confidence 876 446 999999999999999999999996322234788887776644321111111111236789999999999999
Q ss_pred HHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHCCCC
Q 004726 634 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIP 709 (733)
Q Consensus 634 ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~~ 709 (733)
|+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+++.+|++|.|+++|++|+++|+.
T Consensus 638 ea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~l~~~~~~g~~ 713 (725)
T 2wtb_A 638 EACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVL 713 (725)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHTCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998763
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=6.7e-124 Score=1092.23 Aligned_cols=692 Identities=31% Similarity=0.526 Sum_probs=612.7
Q ss_pred CcEEEEEecCcEEEEEeCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-cccCCCCchhhhhccCCC--c
Q 004726 4 PRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG--D 78 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p--~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~--~ 78 (733)
+.++++..+++|++|||||| +.|+||.+|+++|.++++.++.|+++|+||||| |+ .||+|+|++++....... .
T Consensus 6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~ 84 (715)
T 1wdk_A 6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAE 84 (715)
T ss_dssp SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHH
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHH
Confidence 46888833789999999999 579999999999999999999999999999999 76 999999999986532111 1
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+....++++ ++|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 85 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~ 163 (715)
T 1wdk_A 85 LIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDN 163 (715)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHH
Confidence 111223345666 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccC--CC-CCcHHHHHHHHHHHH-HH
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD--KL-GSLSEAREVLKLARL-QA 234 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~-~~ 234 (733)
|++|++||++++|+||+++||||+|+|++++++++.++|++++....++.... +.. +. .........+..++. ..
T Consensus 164 A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~k~~~~ 242 (715)
T 1wdk_A 164 AVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR-QPKLEKLKLNAIEQMMAFETAKGFVA 242 (715)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH-GGGGSCCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc-ccccCccccCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988621111110 000 00 000011112333444 35
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcceEEEE
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~~~~~~~~~~~~~kI~VI 314 (733)
++++++|||+..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++.+. + .+++++||+||
T Consensus 243 ~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~VI 320 (715)
T 1wdk_A 243 GQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAAVL 320 (715)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEEEE
T ss_pred HhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEEEE
Confidence 689999999999999999999999999999999999999999999999999999999998765322 2 45678899999
Q ss_pred cCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCCEEEEe
Q 004726 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394 (733)
Q Consensus 315 G~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI~a 394 (733)
|+|+||++||..++++|++|++||+++++++++.+.+++.+++++++|.+++++.+..+++++.+++++++++||+||+|
T Consensus 321 GaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIea 400 (715)
T 1wdk_A 321 GAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEA 400 (715)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEEEC
T ss_pred CCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEEEc
Confidence 99999999999999999999999999999999988999999999999999998888888899988888889999999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHHHHHHHHH
Q 004726 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474 (733)
Q Consensus 395 vpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~ 474 (733)
|||+.++|+.+++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|+++++.|++++++.+.+
T Consensus 401 V~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~ 480 (715)
T 1wdk_A 401 VVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA 480 (715)
T ss_dssp CCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred HHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004726 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (733)
Q Consensus 475 l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv~~~dID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (733)
+++.+|+.|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.+
T Consensus 481 l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~~~ 560 (715)
T 1wdk_A 481 YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGF 560 (715)
T ss_dssp HHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999888
Q ss_pred CCCCCCc--HHHHHHHHcCCCCcccCccccccC-C--CC-CCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHH
Q 004726 555 PDRSFQS--PLVDLLLKSGRNGKANGKGLYTYE-K--GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 628 (733)
Q Consensus 555 ~~~~~~~--~~l~~~v~~g~~G~k~g~Gfy~y~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 628 (733)
++++.|+ +++++|+++|++|+|||+|||+|+ + ++ +..+|+++..++...+. + ...+++++|++|++
T Consensus 561 ~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~~~~~g~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~i~~r~l 632 (715)
T 1wdk_A 561 PDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVY-----E---QRDVTDEDIINWMM 632 (715)
T ss_dssp HHHHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC-------CEECCTHHHHHHGGGCC-----C---CCCCCHHHHHHHHH
T ss_pred CCccCCChHHHHHHHHhCchhhhcCCcEEEecccCcCCCCcCCCCHHHHHHHhhhcc-----C---ccCCCHHHHHHHHH
Confidence 7766677 899999999999999999999996 3 22 33467776666543211 1 12367899999999
Q ss_pred HHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHCCC
Q 004726 629 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 708 (733)
Q Consensus 629 ~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~ 708 (733)
++++||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+ +.+|++|.|+++|++|+++|+
T Consensus 633 ~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~l~~~~~~g~ 711 (715)
T 1wdk_A 633 IPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAKNGQ 711 (715)
T ss_dssp HHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999 889999999999999999886
Q ss_pred C
Q 004726 709 P 709 (733)
Q Consensus 709 ~ 709 (733)
.
T Consensus 712 ~ 712 (715)
T 1wdk_A 712 S 712 (715)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=1.8e-79 Score=673.83 Aligned_cols=396 Identities=28% Similarity=0.488 Sum_probs=356.9
Q ss_pred CCCCCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 303 ~~~~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
..+++++||+|||+|+||++||..++++|++|++||++++ ++.+.+++.+++++++|.++.++.+..++++.+++++
T Consensus 49 ~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl 125 (460)
T 3k6j_A 49 SEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF 125 (460)
T ss_dssp CCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG
T ss_pred CCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH
Confidence 3467789999999999999999999999999999999998 4566788889999999999999999999999999999
Q ss_pred cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCC
Q 004726 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 462 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~ 462 (733)
+++++||+|||||||++++|+++|+++.+.+++++||+||||+++++++++.+.+|++|+|+|||+|++.++++||+++.
T Consensus 126 ~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~ 205 (460)
T 3k6j_A 126 HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGS 205 (460)
T ss_dssp GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCS
T ss_pred HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHH-HcCCCHHHHHHHHHhcCCCccHHHHHHhhchH
Q 004726 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 541 (733)
Q Consensus 463 ~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~-~~Gv~~~dID~a~~~~G~p~Gpf~~~D~~Gld 541 (733)
.|++++++++.++++.+|++|++++|.|||++||++.++++||+.++ ++|++|++||++++++|+|||||+++|++|||
T Consensus 206 ~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~~G~pmGPf~l~D~vGlD 285 (460)
T 3k6j_A 206 HTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFD 285 (460)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTBSSCHHHHHHHHCTH
T ss_pred CCCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCcCHHHHHHHhchH
Confidence 99999999999999999999999999999999999999999999999 77999999999998899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcHHHHHHHHcCCCCcccCccccccCCCCC-CCCCCCchhHHHHHhhhccCCCCCCCcccch
Q 004726 542 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTE 620 (733)
Q Consensus 542 ~~~~~~~~l~~~~~~~~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
+.+++.+.+ . ..+++++++||++|++|+|||+|||+|+++++ +.+++++..++...+....+. ...+++
T Consensus 286 ~~~~i~~~~----~--~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 355 (460)
T 3k6j_A 286 VMEKLKKEN----G--LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQIIRRVSQNAKSN----IQIIND 355 (460)
T ss_dssp HHHHHHHHS----C--CCCCHHHHHHHHTTCCBGGGTBSSSEECTTTCCEECCHHHHHHHHHC---CCCS----SCCCSH
T ss_pred HHHHHHHHh----c--cCchHHHHHHHHCCCCeeecCCEEEECCCCCCCCCCCHHHHHHHHHHHHhcCCC----cccCCh
Confidence 999998765 1 23568999999999999999999999987543 456776666654433222222 234788
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCC--CCCCH
Q 004726 621 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSR 698 (733)
Q Consensus 621 ~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~--~~p~~ 698 (733)
++|++|++++++||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.|++.+|++ |+|++
T Consensus 356 ~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~p~~ 435 (460)
T 3k6j_A 356 QDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVAD 435 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999999999998999999999999999999999999999999999999999999999997 99999
Q ss_pred HHHHHHHCCCCcc
Q 004726 699 FLEERATKGIPLV 711 (733)
Q Consensus 699 ~l~~~~~~g~~g~ 711 (733)
+|++|+++|++|.
T Consensus 436 ~L~~~a~~g~~~~ 448 (460)
T 3k6j_A 436 ALKTANVSTGSSG 448 (460)
T ss_dssp HHHHHC-------
T ss_pred HHHHHHHcCCCcc
Confidence 9999999999993
No 5
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=9.9e-74 Score=638.69 Aligned_cols=406 Identities=31% Similarity=0.478 Sum_probs=356.6
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
++++||+|||+|+||++||..|+++|++|++||+++++++++.+.+.+.+++++++|.++.++.+..++++.++++++++
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCC
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~ 465 (733)
++||+||+||||+.++|+++++++.+.+++++||+||||+++++.+++.+.++++++|+|||+|++.++++|++++..|+
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts 162 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATA 162 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCC
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHH
Q 004726 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVA 543 (733)
Q Consensus 466 ~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p~Gpf~~~D~~Gld~~ 543 (733)
+++++.+.++++.+|++++++++.|||++||++.++++||+.++++|. ++++||+++ .++|+|||||+++|++|+|+.
T Consensus 163 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~ 242 (483)
T 3mog_A 163 AEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVN 242 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999999999999999999999999999999986 899999999 689999999999999999999
Q ss_pred HHHHHHHHHhC-CCC-CCCcHHHHHHHHcCCCCcccCccccccCCCCCCCC-----CCCchhHHHHH-------------
Q 004726 544 AATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-----DPSVLPIIEEC------------- 603 (733)
Q Consensus 544 ~~~~~~l~~~~-~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~-----~~~~~~~~~~~------------- 603 (733)
+++++.+++.+ +++ +.|++++++|+++|++|+|||+|||+|++++.... ++.....+...
T Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 322 (483)
T 3mog_A 243 FAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLL 322 (483)
T ss_dssp HHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSCCCCCCCCCCCCGGGCCSCEEECSTTEEEETTEEE
T ss_pred HHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCCCCCcccccCCCchhHHHHHHHHhcccccccchhh
Confidence 99999998876 343 34889999999999999999999999976322111 11110000000
Q ss_pred --------------hh----hccC--------C------------------CCCC-Cc--ccchHHHHHHHHHHHHHHHH
Q 004726 604 --------------RR----LSNI--------M------------------PGGK-PI--SVTEKEIVEMILFPVVNESC 636 (733)
Q Consensus 604 --------------~~----~~~~--------~------------------~~~~-~~--~~~~~~i~~r~~~~~~~ea~ 636 (733)
.. ..++ . .-++ +. .-+++||+||++.+++|||+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~~nEA~ 402 (483)
T 3mog_A 323 IETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEAL 402 (483)
T ss_dssp EECSSSCHHHHHHHHTSCEEEEECCSSSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHHHHHHH
T ss_pred cccCCcchHHHhhccccceeeeeccccceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHHHHHHH
Confidence 00 0000 0 0011 00 12578999999999999999
Q ss_pred HHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHCCCCccccce
Q 004726 637 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLVRIIF 715 (733)
Q Consensus 637 ~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~-~~~p~~~l~~~~~~g~~g~g~gf 715 (733)
+|++|||+ +|+|||.+|++|+|||+ |||+|+|.+|+|.++++++.|++.+|+ +|.|+++|++|+++|++|++.|-
T Consensus 403 ~~l~eGva-s~~diD~a~~~G~G~P~---GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~~~ 478 (483)
T 3mog_A 403 DALQKGVA-SEQDIDTAMRLGVNYPY---GPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESEGH 478 (483)
T ss_dssp HHHHTTSS-CHHHHHHHHHHHSCCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC-----
T ss_pred HHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCCCc
Confidence 99999998 99999999999999999 999999999999999999999999985 99999999999999999976654
No 6
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=6.6e-74 Score=640.70 Aligned_cols=430 Identities=33% Similarity=0.545 Sum_probs=370.8
Q ss_pred CCHHHHHHHHHHHhhhhhcCCCCC--CC-CCCCCCCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 275 MLDTSRGLVHVFFAQRATSKVPNV--TD-IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 275 ~s~~~~~~i~aF~~kr~~~~~~~~--~~-~~~~~~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
.|++++++++.|+.+|..+|.++. +. .+..+++++||+|||+|.||++||..|+++|++|++||++++.++++.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 489999999999999999885431 11 133456788999999999999999999999999999999999999998888
Q ss_pred HHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHH
Q 004726 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (733)
Q Consensus 352 ~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (733)
++.+...+++|.+++.+.+... ...+++++.+++||+||+|||++.++|+.+++++.+.+++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~~--~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKPK--LRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCC--EEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHH--hhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 8777777766644322111111 22356677899999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHc
Q 004726 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 511 (733)
Q Consensus 432 ~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~ 511 (733)
++.+.++++++|+|||+|++.++++|+++++.|++++++.+.++++.+|++++++++.|||++||++.++++|++.++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHH---HhCC-------CCC-CCcHHHHHHHHcCCCCcccCcc
Q 004726 512 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAFP-------DRS-FQSPLVDLLLKSGRNGKANGKG 580 (733)
Q Consensus 512 Gv~~~dID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~---~~~~-------~~~-~~~~~l~~~v~~g~~G~k~g~G 580 (733)
|+++++||.+++++|+|+|||+++|.+|||+..++++.+. +.++ +.. .+++++++|+++|++|+|||+|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999998772 2211 111 1368999999999999999999
Q ss_pred ccccCCCCC--CCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhc
Q 004726 581 LYTYEKGSK--PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 658 (733)
Q Consensus 581 fy~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~ 658 (733)
||+|+++++ ...++++..++.......++.+ ..+++++|+||++.+++|||++|++|||+++++|||.+|++|+
T Consensus 319 fy~y~~~g~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~ 394 (463)
T 1zcj_A 319 WYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGY 394 (463)
T ss_dssp SEEESSTTCSCEEECHHHHHHHHHHHHHTTCCC----CCCCHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHS
T ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHcCCCc----ccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCC
Confidence 999964222 2356666666654433222222 2367899999999999999999999999988999999999999
Q ss_pred CCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHHHHCCCCc
Q 004726 659 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPL 710 (733)
Q Consensus 659 gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~~g 710 (733)
|||+|+||||+++|.+|+|.++++++.|++.+|+ +|+|+++|++|+++|+.|
T Consensus 395 G~p~~~gGP~~~~D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~~~ 448 (463)
T 1zcj_A 395 GWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPP 448 (463)
T ss_dssp CCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCC
T ss_pred CCCCCCcChHHHHHHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999998 899999999999999876
No 7
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=6.4e-54 Score=442.42 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=229.3
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccch
Q 004726 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (733)
|.+|+ +|+|++|||||| +.|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++...... ......
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPD--YEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCC--HHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchh--hHHHHH
Confidence 56788 889999999999 58999999999999999999999999999999999999999999998653221 222334
Q ss_pred hHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHH
Q 004726 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (733)
Q Consensus 85 ~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~l 164 (733)
..+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 455666 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchHH
Q 004726 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (733)
Q Consensus 165 tG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (733)
||++++|+||+++||||+|||++++++++.+++++++..++.+++
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHH-----------------------------------
Confidence 999999999999999999999999999999999999998875432
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 245 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|+++
T Consensus 203 -~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 56788999999999999999999999999999999999999999999864
No 8
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.3e-53 Score=443.47 Aligned_cols=254 Identities=25% Similarity=0.328 Sum_probs=224.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc---
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV--- 79 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~--- 79 (733)
+.|.+++ ++||++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 5788998 8899999999995 7999999999999999999999999999999999999999999987643322111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
..+....+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 12222344555 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|||++++++++.++|++++..|+.+++
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 222 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLG------------------------------ 222 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875432
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+++
T Consensus 223 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 223 ------LIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp ------HHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred ------HHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 56788999999999999999999999999999999999999999999864
No 9
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.5e-53 Score=439.52 Aligned_cols=251 Identities=30% Similarity=0.453 Sum_probs=229.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccccc
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (733)
+.+.+++ +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...... ...
T Consensus 5 s~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~---~~~ 80 (258)
T 4fzw_A 5 SELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLA---ATL 80 (258)
T ss_dssp CEEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHH---HHH
T ss_pred CcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhh---hHH
Confidence 3688999 8999999999995 7999999999999999999999999999999999999999999988653211 112
Q ss_pred chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 83 ~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
......++ .++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 81 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l 159 (258)
T 4fzw_A 81 NDTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKM 159 (258)
T ss_dssp TCSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HhHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHH
Confidence 22344566 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|||++++++++.++++++++.+|.+++
T Consensus 160 lltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------------- 206 (258)
T 4fzw_A 160 VLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQ--------------------------------- 206 (258)
T ss_dssp HHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.++
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 207 ---AAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp ---HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 56788999999999999999999999999999999999999999999864
No 10
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.6e-52 Score=440.16 Aligned_cols=268 Identities=21% Similarity=0.335 Sum_probs=238.8
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHH-HHHHHhhccccccCc-cc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 384 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 384 (733)
.++||+|||+|+||++||..++++|++|+++|++++.++++.+.+++.+..++++|.++.. ..++.++++..++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 3679999999999999999999999999999999999999999999999999999988754 566778899999998 67
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCC
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t 464 (733)
+++||+|||||||++++|+++|++|++++++++||+||||+++++++++.+.+|+||+|+|||||++.+|+||||+++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCCcchhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHhh
Q 004726 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 538 (733)
Q Consensus 465 ~~e~~~~~~~l~~~lG~~~v~v-~d~pGfi~nRl~~~~~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p---~Gpf~~~D~~ 538 (733)
++++++++.+|++.+|++|+++ +|+||||+||++.++++||++++++|+ +++|||.++ .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999997 999999999 788886 8999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCcHHHHHH-HHcCCCCcccCccccccC
Q 004726 539 GYGVAAATSKEFDKAFPDRSFQSPLVDLL-LKSGRNGKANGKGLYTYE 585 (733)
Q Consensus 539 Gld~~~~~~~~l~~~~~~~~~~~~~l~~~-v~~g~~G~k~g~Gfy~y~ 585 (733)
|+|+...+.+ +. +.++.+ -+.|+.+.++|+++|+|.
T Consensus 245 G~~~~~~~~~-~~----------~~~~~~~~~~~~~p~~~~~~~~k~~ 281 (319)
T 3ado_A 245 AEGMLSYCDR-YS----------EGMKRVLKSFGSIPEFSGATVEKVN 281 (319)
T ss_dssp TTSHHHHHHH-HH----------HHHHHHHHTCCCCCCCCHHHHHHHH
T ss_pred CccHHHHHHH-hh----------HhHHHHHHHcCcccccchHHHHHHH
Confidence 9987554322 21 122222 233666666666666553
No 11
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=3.5e-52 Score=431.34 Aligned_cols=256 Identities=27% Similarity=0.462 Sum_probs=231.7
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCCC
Q 004726 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (733)
Q Consensus 1 m~~~~v~~~-~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (733)
|+|+.|.++ . +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++.... ..
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN-EE 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC-HH
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC-HH
Confidence 678899999 7 8899999999995 6999999999999999999999999999999999 8999999999986532 11
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
....+....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222333445666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|+|++++++++.++|++++..+|.++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~----------------------------- 212 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAV----------------------------- 212 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887543
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 213 -------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 213 -------RLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp -------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356788999989999999999999999999999999999999999998764
No 12
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=3.2e-52 Score=430.63 Aligned_cols=255 Identities=37% Similarity=0.616 Sum_probs=230.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccccc
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (733)
|+++.++. +++|++||||||+.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 46899999 89999999999966999999999999999999999999999999999999999999998653221111122
Q ss_pred chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 83 ~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 23334556 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|+|++++++++.++|++++..+|.++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~---------------------------------- 208 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATA---------------------------------- 208 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH----------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999887543
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 209 --~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f~ 259 (261)
T 3pea_A 209 --RAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSFS 259 (261)
T ss_dssp --HHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356788888888889999999999999999999999999999999998864
No 13
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=4e-52 Score=434.06 Aligned_cols=258 Identities=32% Similarity=0.423 Sum_probs=238.7
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
.-+||+|||+|+||++||.+|+ +|++|++||+++++++++.+.+ .+..+++++++++++.++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l-----------------~~~~~~~i~~~~~~~~~~ 72 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQI-----------------PEELLSKIEFTTTLEKVK 72 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHS-----------------CGGGGGGEEEESSCTTGG
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHH-----------------HHHHhCCeEEeCCHHHHc
Confidence 3479999999999999999999 9999999999999988875430 133456788788887799
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCH
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~ 466 (733)
+||+||+||||+.++|+.+|++++.. +++|++||||+++++++++.+.++.+++|+|||+|++.++++|+++++.|++
T Consensus 73 ~aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~ 150 (293)
T 1zej_A 73 DCDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDS 150 (293)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCH
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCH
Confidence 99999999999999999999999877 8999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcCCCHHHHHHHH-HhcCCCc---cHHHHHHhhchHH
Q 004726 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGV 542 (733)
Q Consensus 467 e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv~~~dID~a~-~~~G~p~---Gpf~~~D~~Gld~ 542 (733)
++++++.++++.+|++|++++|. |++||++.++++||+.++++|++|++||.++ .++|+|+ |||+++|++|+|+
T Consensus 151 ~~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~ 228 (293)
T 1zej_A 151 KTVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDV 228 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHH
Confidence 99999999999999999999987 9999999999999999999999999999999 7899999 9999999999999
Q ss_pred HHHHHHHHHHhCCC-CCCCcHHHHHHHHcCCCCcccCccccccCC
Q 004726 543 AAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEK 586 (733)
Q Consensus 543 ~~~~~~~l~~~~~~-~~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~ 586 (733)
++++++.+++.+++ ++.|++++++|+++|++|+|||+|||+|++
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 229 AYYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 99999999999887 444889999999999999999999999954
No 14
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=6.8e-52 Score=429.25 Aligned_cols=258 Identities=21% Similarity=0.310 Sum_probs=229.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+|+.|.+++ +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 8999999999995 6999999999999999999999999999999999999999999998653222111
Q ss_pred --cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 80 --SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 80 --~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
........+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~ 157 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGER 157 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHH
Confidence 11122344556 67999999999999999999999999999999999999999999999999999988 799999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|||++++++++.++|++|+..||.+++
T Consensus 158 ~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 209 (268)
T 3i47_A 158 AAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVK---------------------------- 209 (268)
T ss_dssp HHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~-~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
.+|++++.....++++ .++.|.+.+..++.|+|++|++++|++||+|.+...
T Consensus 210 --------~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~~ 262 (268)
T 3i47_A 210 --------NSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNEG 262 (268)
T ss_dssp --------HHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC--
T ss_pred --------HHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCCC
Confidence 5678888888888877 689999999999999999999999999999997654
No 15
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=9.5e-52 Score=434.14 Aligned_cols=275 Identities=29% Similarity=0.423 Sum_probs=256.2
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHhhccccccCc-cc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g-~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
.++||+|||+|.||++||..++++|++|++||+++++++++.+.+.+.+...+++| .++..+.+....++..++++ +.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 46899999999999999999999999999999999999999999999999988888 78877778888888888888 46
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCC
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t 464 (733)
+++||+||+|||+++++++.+++++.+.+++++|++||||+++++++++.+.++.+++|+||++|++.++++|++++..|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCCcchhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchH
Q 004726 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYG 541 (733)
Q Consensus 465 ~~e~~~~~~~l~~~lG~~~v~v-~d~pGfi~nRl~~~~~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p~Gpf~~~D~~Gld 541 (733)
++++++.+.++++.+|+.++++ ++.|||++||++.++++||++++++|. +|++||+++ .++|+|+|||+++|++|||
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld 242 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLT 242 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHH
Confidence 9999999999999999999999 799999999999999999999999985 999999999 7899999999999999999
Q ss_pred HHHHHHHHHHHhCCCC-CCCcHHHHHHHHcCCCCcccCcccccc
Q 004726 542 VAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANGKGLYTY 584 (733)
Q Consensus 542 ~~~~~~~~l~~~~~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y 584 (733)
+.+++.++ ..++. ..|++++++||++|++|+|||+|||+|
T Consensus 243 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 243 TAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 99999883 22222 237789999999999999999999998
No 16
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.6e-52 Score=432.18 Aligned_cols=256 Identities=24% Similarity=0.383 Sum_probs=229.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.+ |+++|+|||||.|++||+|+|++++..... ...
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDA-TEG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCH-HHH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccCh-hhH
Confidence 6678899999 8999999999995 8999999999999999999 579999999999999999999998865211 111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
.......++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 12223345566 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|||++++.+++.++|++++..+|.++
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~------------------------------- 216 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTN------------------------------- 216 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHH-------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887543
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
..+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|++...
T Consensus 217 -----~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~~ 269 (275)
T 3hin_A 217 -----FAVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVREG 269 (275)
T ss_dssp -----HHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC---
T ss_pred -----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 35678888888899999999999999999999999999999999999997553
No 17
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=8e-52 Score=427.85 Aligned_cols=254 Identities=32% Similarity=0.446 Sum_probs=231.3
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc
Q 004726 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 1 m~~~~v~~~~~~~~-i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (733)
|+|+.|.++. +++ |++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 7788999999 566 9999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
......+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1122234556 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.++
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 210 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAG------------------------------ 210 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887543
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 211 ------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 211 ------RAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp ------HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 356888999889999999999999999999999999999999999998864
No 18
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=1.1e-51 Score=429.32 Aligned_cols=254 Identities=30% Similarity=0.487 Sum_probs=229.5
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 7788999999 7899999999995 69999999999999999999999999999999999999999999986532111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
......... + .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 99 ~~~~~~~~~-~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFFAT-W-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTTGG-G-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHH-H-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 001111222 4 56899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|+|++++++++.++|++++..+|.++
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~------------------------------- 225 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAA------------------------------- 225 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887543
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 226 -----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 226 -----RMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp -----HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356888999989999999999999999999999999999999999998864
No 19
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=6.6e-51 Score=419.41 Aligned_cols=250 Identities=29% Similarity=0.378 Sum_probs=228.0
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccch
Q 004726 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (733)
|.++. +++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++... ......+..
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~--~~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR--KPDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS--CCCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhc--chhHHHHHH
Confidence 57788 7899999999995 7999999999999999999999999999999999999999999998653 111222223
Q ss_pred hHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHH
Q 004726 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (733)
Q Consensus 85 ~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~l 164 (733)
..++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 345666 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchHH
Q 004726 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (733)
Q Consensus 165 tG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (733)
||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 245 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|.+.
T Consensus 203 -~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888999999999999999999999999999999999998764
No 20
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=3.3e-50 Score=426.85 Aligned_cols=282 Identities=33% Similarity=0.529 Sum_probs=261.2
Q ss_pred CCCCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHH-----HHHHHhhcccc
Q 004726 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLKG 378 (733)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~-----~~~~~~~~i~~ 378 (733)
|..+|+||+|||+|.||.+||..|+++|++|++||+++++++++.+.+.+.++.++++|.++.. +......++..
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 4556789999999999999999999999999999999999999988888888888999887654 44455567888
Q ss_pred ccCcc-ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeE
Q 004726 379 VLDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 457 (733)
Q Consensus 379 ~~~~~-~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lve 457 (733)
+++++ ++++||+||+|||++.++++.+++++.+.+++++||+|++|+++++++++.+.++.+++++||++|++.++++|
T Consensus 91 ~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~~ 170 (302)
T 1f0y_A 91 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVE 170 (302)
T ss_dssp ESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEE
T ss_pred ecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceEE
Confidence 88885 89999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcC-CCHHHHHHHH-HhcCCCccHHHHH
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG-VDVFRIDSAI-RSFGLPIGPFQLL 535 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~G-v~~~dID~a~-~~~G~p~Gpf~~~ 535 (733)
+++++.+++++++.+.++++.+|+.++++++.|||++||++.++++|+++++++| +++++||.++ .++|||+|||+++
T Consensus 171 i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~~ 250 (302)
T 1f0y_A 171 VIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELL 250 (302)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997 5999999999 7999999999999
Q ss_pred HhhchHHHHHHHHHHHHhC-CCC-CCCcHHHHHHHHcCCCCcccCccccccC
Q 004726 536 DLAGYGVAAATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYE 585 (733)
Q Consensus 536 D~~Gld~~~~~~~~l~~~~-~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~ 585 (733)
|.+|+|+++++++.+++.+ +++ +.|++++++|+++|++|+|||+|||+|+
T Consensus 251 D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 251 DYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 9999999999999999988 775 4589999999999999999999999994
No 21
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=6.1e-51 Score=421.97 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=218.5
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhh---hccC
Q 004726 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (733)
Q Consensus 1 m~-~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~---~~~~ 75 (733)
|| ++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 67899999 8999999999995 89999999999999999999999999999999999999999999987 3222
Q ss_pred CCcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccC
Q 004726 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (733)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 155 (733)
.. ........+++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233455666 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (733)
..+|++|++||++++|+||+++||||+|+| ++++++.++|++++..||.+++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~-------------------------- 208 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLK-------------------------- 208 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999998 8999999999999998875443
Q ss_pred HhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 236 ~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
.+|++++... .+++++++.|...+..++.|+|++|++++|++||+|.+.+.
T Consensus 209 ----------~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~~ 259 (266)
T 3fdu_A 209 ----------QTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQE 259 (266)
T ss_dssp ----------HHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC----------
T ss_pred ----------HHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 4456666554 46789999999999999999999999999999999998664
No 22
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=2.4e-51 Score=425.40 Aligned_cols=256 Identities=24% Similarity=0.333 Sum_probs=228.0
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc
Q 004726 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 1 m~-~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (733)
|+ |+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++........
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence 55 67899999 8999999999995 799999999999999999999999999999999999999999999865432211
Q ss_pred ccccchhHHHHHHHHH-hcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i-~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
..+.....+.+ .++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 -~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 84 -SLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp -CCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred -HHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 11222222334 457 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|+|++++++++.++|++++..+|.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQ---------------------------- 213 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 214 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 214 --------ATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp --------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 56778888888899999999999999999999999999999999998764
No 23
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=8.6e-51 Score=418.53 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=226.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .
T Consensus 5 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~ 76 (255)
T 3p5m_A 5 MNGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------G 76 (255)
T ss_dssp BTTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------H
T ss_pred CceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------H
Confidence 34689998 8899999999995 6999999999999999999999999999999999999999999987631 2
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 77 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 155 (255)
T 3p5m_A 77 AADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSR 155 (255)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 333445666 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+|++++++++.++|++++..+|.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (255)
T 3p5m_A 156 MAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFG-------------------------------- 203 (255)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 204 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 253 (255)
T 3p5m_A 204 ----WTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNFR 253 (255)
T ss_dssp ----HHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888899999999999999999999999999999999998764
No 24
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=7.7e-51 Score=424.98 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=229.6
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC
Q 004726 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (733)
Q Consensus 1 m~~~~v~~~~~~--~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~ 77 (733)
|+++ |.++. + ++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 6665 88888 6 899999999995 69999999999999999999999999999999999999999999987521111
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
....+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|..
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~ 177 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRK 177 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHH
Confidence 1122233345666 67999999999999999999999999999999999999999999999999 788899999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|||++++.+++.++|++++..+|.+++
T Consensus 178 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 229 (286)
T 3myb_A 178 AAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVA---------------------------- 229 (286)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875432
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~~ 298 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++....
T Consensus 230 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g~~ 282 (286)
T 3myb_A 230 --------MGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHTPQ 282 (286)
T ss_dssp --------HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCCCC
Confidence 56788888888999999999999999999999999999999999999876543
No 25
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=2.6e-51 Score=424.37 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=223.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcc-cCCCCchhhhh--c-cC
Q 004726 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F-~aG~Dl~~~~~--~-~~ 75 (733)
|||+.|.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|+.| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 9999999999 899999999999 68999999999999999999999999999999999999 99999999876 2 11
Q ss_pred CCcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccC
Q 004726 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (733)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 155 (733)
......+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111222333345666 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcC-cchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~-~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
..+|++|++||++++|+||+++||||+|+| ++++.+++.++|++++..||.+++
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIA------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 999999999999999999999999999999 999999999999999998875433
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcC
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++++++.+
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 214 -----------ATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp -----------HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred -----------HHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 5677888887788999999999999999999999999999999998764
No 26
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=1.4e-50 Score=422.81 Aligned_cols=256 Identities=25% Similarity=0.358 Sum_probs=231.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc--
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (733)
|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 56799999 7899999999995 7999999999999999999999999999999999999999999998764332211
Q ss_pred -cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCC-CChhhhhhhccccCHH
Q 004726 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PGFGGTQRLPRLVGLS 157 (733)
Q Consensus 80 -~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-P~~g~~~~l~r~~G~~ 157 (733)
..+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|+|++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 11222344556 67999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|+|++++.+++.++|++|+..++.+++
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 225 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHA---------------------------- 225 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++..
T Consensus 226 --------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 276 (279)
T 3g64_A 226 --------QTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQG 276 (279)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCCC
T ss_pred --------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 567888888889999999999999999999999999999999999988654
No 27
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=1.5e-50 Score=423.98 Aligned_cols=255 Identities=24% Similarity=0.347 Sum_probs=224.0
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc----
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---- 78 (733)
..+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4577888 8999999999995 899999999999999999999999999999999999999999999865432211
Q ss_pred --ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCC-hhhhhhhccccC
Q 004726 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-FGGTQRLPRLVG 155 (733)
Q Consensus 79 --~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~-~g~~~~l~r~~G 155 (733)
...+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|+|++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 111223344556 6799999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (733)
..+|++|++||++++|+||+++||||+|||++++++++.++|++|+..||.+++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 235 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIE-------------------------- 235 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999998875433
Q ss_pred HhCCCchHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhhhhhcCCC
Q 004726 236 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 236 ~~~~~~~a~~~~~~~i~~~~~-~~~~~~l~~E~~~~~~~~-~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.... .+++++++.|...+..++ .|+|++|++++|++||+|++.+
T Consensus 236 ----------~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~g 288 (290)
T 3sll_A 236 ----------LTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFRD 288 (290)
T ss_dssp ----------HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCCS
T ss_pred ----------HHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 56788888888 899999999999999999 9999999999999999988654
No 28
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=4.4e-51 Score=421.52 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=189.9
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
+..|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 45788998 8899999999995 699999999999999999999999999999999999999999999865432222223
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
.....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 344456677 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLM-------------------------------- 210 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~ 291 (733)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+
T Consensus 211 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 211 ----AVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ----HHHHHHHCC-------------------------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 5678888888888999999999999999999999999999999985
No 29
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=9.2e-51 Score=422.20 Aligned_cols=258 Identities=24% Similarity=0.317 Sum_probs=229.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC---C
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~---~ 76 (733)
|+ +.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 66 5688998 7899999999995 899999999999999999999999999999999999999999998754210 0
Q ss_pred Ccc-cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccC
Q 004726 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (733)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 155 (733)
... ..+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 000 11222244556 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (733)
..+|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------- 211 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQV-------------------------- 211 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999998865332
Q ss_pred HhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 236 ~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.+.
T Consensus 212 ----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~~ 263 (269)
T 1nzy_A 212 ----------MAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQV 263 (269)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCSS
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 4577888888889999999999999999999999999999999999987553
No 30
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=2.5e-50 Score=417.77 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=221.3
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc
Q 004726 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 1 m~-~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (733)
|+ ++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++ ... . ..
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~-~~ 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--M-VR 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--c-cc
Confidence 54 67899999 7899999999995 79999999999999999999999999999999999999999998 321 1 11
Q ss_pred ccccchhHHH-HHHHHH-h--cCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhcccc
Q 004726 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (733)
Q Consensus 79 ~~~~~~~~~~-~~~~~i-~--~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~ 154 (733)
...+...... ++ ..+ . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122223345 56 668 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 155 G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
|..+|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVR------------------------- 213 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999998875433
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 214 -----------NAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp -----------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred -----------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888899999999999999999999999999999999998764
No 31
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=4.1e-51 Score=423.33 Aligned_cols=254 Identities=23% Similarity=0.322 Sum_probs=228.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~- 83 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNP- 83 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSS-
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHH-
Confidence 46788998 7899999999995 69999999999999999999999999999999999999999999986643222111
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
.... +.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~-~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 84 DFSA-SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp CCCS-CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred HHHH-HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1112 3445 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHcc-CchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
|++||++++|+||+++||||+|+|++++++++.++|++++.. ||.+++
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~------------------------------- 210 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAA------------------------------- 210 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHH-------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHH-------------------------------
Confidence 999999999999999999999999999999999999999998 775433
Q ss_pred chHHHHHHHHHHHhhcCCHHHH--HHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 241 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 241 ~~a~~~~~~~i~~~~~~~~~~~--l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.....+++++ ++.|.+.+..++.|+|++|++++|++||+|++..
T Consensus 211 -----~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~g 263 (265)
T 3qxz_A 211 -----LTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWAG 263 (265)
T ss_dssp -----HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCCC
T ss_pred -----HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCCC
Confidence 56777888777788888 9999999999999999999999999999998644
No 32
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.8e-50 Score=416.63 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=228.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.+.++. +++|++||||||+.|++|.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++.. .. .....
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~~-~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-AD-PRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-SC-HHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-cc-hhHHH
Confidence 45788998 789999999999779999999999999999999999999999999 9999999999998864 11 11111
Q ss_pred cchhH-HHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCc-eEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 82 ~~~~~-~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a-~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
+.... ++++ .+|.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|++++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22234 5666 67999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|+|++++++++.+++++++..+|.++
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 212 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAV------------------------------- 212 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999876533
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 213 -----~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~ 263 (265)
T 2ppy_A 213 -----SNIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNWK 263 (265)
T ss_dssp -----HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356788888888899999999999999999999999999999999988753
No 33
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.4e-50 Score=416.17 Aligned_cols=251 Identities=26% Similarity=0.368 Sum_probs=222.7
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccccc
Q 004726 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (733)
+.+.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDH---GDV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CH---HHH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccch---hHH
Confidence 6788998 789999999999 58999999999999999999999999999999999999999999987542211 111
Q ss_pred ch-hHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 83 ~~-~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
.. ..++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 244556 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+|++++.+++.+++++++..+|.++
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------------- 204 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAI--------------------------------- 204 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHH---------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999886433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 205 ---~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~~ 255 (257)
T 2ej5_A 205 ---GLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLFQ 255 (257)
T ss_dssp ---HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCCC
T ss_pred ---HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCCC
Confidence 256778888888899999999999999999999999999999999988753
No 34
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=3.2e-50 Score=415.55 Aligned_cols=254 Identities=30% Similarity=0.458 Sum_probs=226.6
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc
Q 004726 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 1 m~-~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (733)
|+ +..+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 55 56788888 7899999999995 7999999999999999999999999999999999999999999987542210
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+.... +++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 11111122 455 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|++++++++.++|++++..+|.++
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 205 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLAL------------------------------ 205 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH------------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999886543
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 206 ------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~~ 256 (258)
T 2pbp_A 206 ------RLIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRFQ 256 (258)
T ss_dssp ------HHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCC
Confidence 256778888888899999999999999999999999999999999988753
No 35
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=1.7e-50 Score=421.25 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=221.2
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC-----C-
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-----A- 76 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-----~- 76 (733)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 5799999 7899999999995 799999999999999999999999999999999999999999999865432 0
Q ss_pred CcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCH
Q 004726 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
..........++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.
T Consensus 90 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~ 167 (274)
T 3tlf_A 90 LSTYDQWEAPQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPR 167 (274)
T ss_dssp TCSGGGGSCCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCH
T ss_pred hhHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCH
Confidence 00111111223444 568999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHcCC--CCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 157 ~~a~~l~ltG~--~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
.+|++|++||+ +++|+||+++||||+|+|++++++++.++|++++..+|.++
T Consensus 168 ~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------- 221 (274)
T 3tlf_A 168 SIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAV-------------------------- 221 (274)
T ss_dssp HHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH--------------------------
T ss_pred HHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHH--------------------------
Confidence 99999999999 99999999999999999999999999999999999887543
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 222 ----------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 222 ----------RGTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp ----------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 356788888888999999999999999999999999999999999998764
No 36
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=1.7e-50 Score=422.24 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=222.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccC----CC
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~----~~ 77 (733)
|+.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 78899999 88999999999999999999999999999999999999999999998 79999999998864210 00
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeC-CceEeCccccCCCCCChhhhhhhccccCH
Q 004726 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~-~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
.........++++ .+|.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112233345666 679999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (733)
Q Consensus 157 ~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (733)
.+|++|++||++++|+||+++||||+|||++++++++.++|++|+..+|.+++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~--------------------------- 218 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIE--------------------------- 218 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999998875443
Q ss_pred hCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh--hcC
Q 004726 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA--TSK 294 (733)
Q Consensus 237 ~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~--~~~ 294 (733)
.+|++++.. ...++++.|...+..++.|+|++|++++|++||+ |.+
T Consensus 219 ---------~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~~~P~f 266 (287)
T 3gkb_A 219 ---------AAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGAQTPAG 266 (287)
T ss_dssp ---------HHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTTTSHHH
T ss_pred ---------HHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCch
Confidence 345566553 3468899999999999999999999999999987 554
No 37
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=3.4e-50 Score=416.03 Aligned_cols=254 Identities=22% Similarity=0.279 Sum_probs=227.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CC-CcccCCCCchhhhhccCCC
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g-~g-~~F~aG~Dl~~~~~~~~~~ 77 (733)
|+|+.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+ +|+||||| .| ++||+|+|++++.......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~ 78 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP 78 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence 8999999999 7899999999995 89999999999999999999999 99999999 98 9999999999876432111
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHH
Q 004726 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (733)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~ 157 (733)
. ......++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 79 -~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 79 -L-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp -T-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred -H-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 1 1222345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004726 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (733)
Q Consensus 158 ~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (733)
+|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.++
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------- 206 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAI----------------------------- 206 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999876433
Q ss_pred CCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 238 ~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~--~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+. .++.|+|++|++++|++||+|.+.
T Consensus 207 -------~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~~ 259 (261)
T 1ef8_A 207 -------AVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFV 259 (261)
T ss_dssp -------HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCCC
Confidence 245677887777888899999999999 999999999999999999988753
No 38
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=3.5e-50 Score=413.95 Aligned_cols=250 Identities=28% Similarity=0.435 Sum_probs=225.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+ +.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 44 5688998 7999999999995 7999999999999999999999999999999999999999999998753221111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
. . . . + ..+ ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 83 ~---~-~-~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 R---G-L-G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp T---E-E-T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred h---h-h-h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 1 1 1 1 2 235 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|||++++.+++.++|++++..+|.+++
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 204 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVA------------------------------ 204 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 205 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 255 (256)
T 3trr_A 205 ------ATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQG 255 (256)
T ss_dssp ------HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCCC
Confidence 567889999999999999999999999999999999999999999988643
No 39
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=6.5e-50 Score=429.14 Aligned_cols=292 Identities=19% Similarity=0.265 Sum_probs=231.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCCC--c
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (733)
+++|.+++ +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||+| ++||+|+|++++....... .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 57899999 8999999999995 7999999999999999999999999999999998 6999999999986532221 1
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 122223344555 6799999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhh---------hh----hhccCCCCCcHHHHH
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI---------RS----LHRTDKLGSLSEARE 225 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~---------~~----~~~~~~~~~~~~~~~ 225 (733)
|++|++||++++|+||+++||||+|||+++|++.+.+++.+......... .. +.+.-....+.....
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~ 244 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIA 244 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999999999999999999999998876432110000 00 000000011111111
Q ss_pred HHH-----HHHHHH-HHhCCCchHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--hhhhhcCCC
Q 004726 226 VLK-----LARLQA-KKTAPNMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATSKVP 296 (733)
Q Consensus 226 ~~~-----~~~~~~-~~~~~~~~a~~~~~~~i~~~~~~-~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~--~kr~~~~~~ 296 (733)
.++ ...... +...+...+...+|+.++++... +++++++.|.+.+..++.|+|++||++||+ +||+|++++
T Consensus 245 ~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p 324 (353)
T 4hdt_A 245 ALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRP 324 (353)
T ss_dssp HHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSS
T ss_pred HHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCC
Confidence 111 111122 23445555788889999998875 799999999999999999999999999999 999999876
Q ss_pred C
Q 004726 297 N 297 (733)
Q Consensus 297 ~ 297 (733)
.
T Consensus 325 ~ 325 (353)
T 4hdt_A 325 A 325 (353)
T ss_dssp C
T ss_pred C
Confidence 4
No 40
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=4.3e-51 Score=429.00 Aligned_cols=257 Identities=25% Similarity=0.329 Sum_probs=183.3
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhh---ccCCC
Q 004726 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (733)
Q Consensus 3 ~~~v~~~~~~~-~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~---~~~~~ 77 (733)
|+.|.++. ++ +|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 47799999 77 99999999995 799999999999999999999999999999999999999999998864 11110
Q ss_pred ----cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccc
Q 004726 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL 153 (733)
Q Consensus 78 ----~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~ 153 (733)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111111222334 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHcc-CchhhhhhhccCCCCCcHHHHHHHHHHHH
Q 004726 154 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 232 (733)
Q Consensus 154 ~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (733)
+|..+|++|++||++++|+||+++||||+|+|++++++++.++|++|+.. +|.++
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~------------------------ 241 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSM------------------------ 241 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHH------------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999998 76543
Q ss_pred HHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
..+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.+.
T Consensus 242 ------------~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~~ 294 (298)
T 3qre_A 242 ------------AVIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPSL 294 (298)
T ss_dssp ------------HHHHHHHHGGGGC----------------------------------------
T ss_pred ------------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 35678899988899999999999999999999999999999999999987653
No 41
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.9e-50 Score=417.98 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=225.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
...+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++...........
T Consensus 32 ~~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 110 (287)
T 2vx2_A 32 PRPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAE 110 (287)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHH
T ss_pred CcceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHH
Confidence 35688998 7899999999995 799999999999999999999999999999999999999999998754321111111
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |++++|..+|++
T Consensus 111 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~ 188 (287)
T 2vx2_A 111 VFQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALE 188 (287)
T ss_dssp HHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHH
Confidence 222344556 679999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|||++++.+++.++|++++..+|.+++
T Consensus 189 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------------- 236 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVS-------------------------------- 236 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998865332
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcC
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 237 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 237 ----LGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp ----HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4567888888889999999999999999999999999999999998875
No 42
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=3.3e-50 Score=416.71 Aligned_cols=253 Identities=27% Similarity=0.413 Sum_probs=224.0
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCCCccc
Q 004726 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
++.|.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++.........
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~- 85 (267)
T 3r9t_A 8 APGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHP- 85 (267)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCT-
T ss_pred CCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhH-
Confidence 46799999 889999999999 57999999999999999999999999999999999 599999999998754322211
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~ 160 (733)
.........+ . ..++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 86 ~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 163 (267)
T 3r9t_A 86 DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAM 163 (267)
T ss_dssp TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHH
T ss_pred HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHH
Confidence 1111110122 1 3489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 161 ~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
+|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.+++
T Consensus 164 ~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 212 (267)
T 3r9t_A 164 RLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQ------------------------------- 212 (267)
T ss_dssp HHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875433
Q ss_pred chHHHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 241 MPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 241 ~~a~~~~~~~---i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++ ++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 213 -----~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 213 -----ASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp -----HHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45677 777778889999999999999999999999999999999998764
No 43
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=4e-50 Score=419.18 Aligned_cols=254 Identities=25% Similarity=0.347 Sum_probs=215.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++...........
T Consensus 19 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 97 (278)
T 4f47_A 19 GPDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD 97 (278)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC-------------------
T ss_pred CCceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH
Confidence 35688998 8899999999995 799999999999999999999999999999999999999999999865432211111
Q ss_pred cchhHHHHHHHHHh---cCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 82 MPDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 82 ~~~~~~~~~~~~i~---~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
....+.++ +.+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 98 -~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~ 175 (278)
T 4f47_A 98 -GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTV 175 (278)
T ss_dssp ----CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHH
T ss_pred -HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHH
Confidence 00111223 3455 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|++++++++.++|++++..++.++
T Consensus 176 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 225 (278)
T 4f47_A 176 ACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAV------------------------------ 225 (278)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887543
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 226 ------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 226 ------QAILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp ------HHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 356788999988999999999999999999999999999999999998864
No 44
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=1.9e-49 Score=413.91 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=227.6
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC---
Q 004726 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (733)
+|++|.++.++++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++.......
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 80 (275)
T 1dci_A 1 AYESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGD 80 (275)
T ss_dssp CCSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCS
T ss_pred CCceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 36788998755789999999995 89999999999999999999999999999999999999999999886431110
Q ss_pred c-------ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhh
Q 004726 78 D-------VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRL 150 (733)
Q Consensus 78 ~-------~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l 150 (733)
. ...+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l 159 (275)
T 1dci_A 81 DVARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRL 159 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHG
T ss_pred hhhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHH
Confidence 0 001112234455 56899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCH-HHHHHHHHcCCCCCHHHHHHcCCccEEcCc-chHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHH
Q 004726 151 PRLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 228 (733)
Q Consensus 151 ~r~~G~-~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~-~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (733)
++++|. .+|++|++||++++|+||+++||||+|+|+ +++++++.++|++++..+|.+++
T Consensus 160 ~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~------------------- 220 (275)
T 1dci_A 160 PKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ------------------- 220 (275)
T ss_dssp GGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHH-------------------
T ss_pred HHHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHH-------------------
Confidence 999999 999999999999999999999999999999 99999999999999998875433
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh---hhhcCC
Q 004726 229 LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSKV 295 (733)
Q Consensus 229 ~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~k---r~~~~~ 295 (733)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++| |+|.+.
T Consensus 221 -----------------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f~ 273 (275)
T 1dci_A 221 -----------------GSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITFS 273 (275)
T ss_dssp -----------------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCCC
T ss_pred -----------------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCCC
Confidence 46778888888899999999999999999999999999999999 888753
No 45
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-49 Score=412.21 Aligned_cols=254 Identities=18% Similarity=0.179 Sum_probs=217.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC-CCc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~ 78 (733)
|+|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 7788999999 8999999999995 7999999999999999999986 6999999999999999999999876421 112
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
.........+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|..+
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~ 159 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQK 159 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHH
Confidence 223344555666 679999999999999999999999999999999999999999999999999885 778999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|+.+ +.+.++++++++.+|.+++
T Consensus 160 A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~----------------------------- 208 (267)
T 3hp0_A 160 AHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIA----------------------------- 208 (267)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999998654 3467899999988875433
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
.+|++++... ...+++++.|.+.+..++.|+|++|++++|++||+|.+.+.
T Consensus 209 -------~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~~ 259 (267)
T 3hp0_A 209 -------HYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWEDQ 259 (267)
T ss_dssp -------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC-----
T ss_pred -------HHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCCC
Confidence 4566676653 34677888999999999999999999999999999998763
No 46
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=2.1e-50 Score=416.64 Aligned_cols=249 Identities=27% Similarity=0.338 Sum_probs=206.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccccc
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (733)
+.|.++. +++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++....... ...
T Consensus 11 ~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~- 87 (262)
T 3r9q_A 11 PAVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNE-LHP- 87 (262)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCC-CCT-
T ss_pred CEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhh-HHH-
Confidence 3588998 7899999999995 79999999999999999999999999999999999999999999986543211 110
Q ss_pred chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 83 ~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
.....++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 88 -~~~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 165 (262)
T 3r9q_A 88 -HGPGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDL 165 (262)
T ss_dssp -TSSCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred -hhhhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 0011222 34678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|+|++++.+++.++|+++++.+|.+++
T Consensus 166 ~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 212 (262)
T 3r9q_A 166 ILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVR--------------------------------- 212 (262)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.....+++++++.|.+ +..++.| |++|++++|++||+|.+.
T Consensus 213 ---~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~~ 260 (262)
T 3r9q_A 213 ---ADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHGA 260 (262)
T ss_dssp ---HHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC-------------------
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCCC
Confidence 56788899999999999999999 9999999 999999999999998763
No 47
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=5.5e-50 Score=414.94 Aligned_cols=253 Identities=23% Similarity=0.241 Sum_probs=224.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhc-c-CCCccc
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (733)
|+.+.++.++++|++||||||+.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 567888874578999999999999999999999999999999999999999999999999999999 7542 1 100011
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~ 160 (733)
.+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1223344566 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 161 ~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
+|++||++++|+||+++||||+|+|++++.+++.+++++++..+|.+++
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 215 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALH------------------------------- 215 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998764332
Q ss_pred chHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcC
Q 004726 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 241 ~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|++++.+... ++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 216 -----~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 216 -----HTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp -----HHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 456777777777 899999999999999999999999999999998864
No 48
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=9.8e-50 Score=414.61 Aligned_cols=256 Identities=24% Similarity=0.285 Sum_probs=216.4
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-----CC-CcccCCCCchhhhhcc
Q 004726 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVH 74 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g-----~g-~~F~aG~Dl~~~~~~~ 74 (733)
+|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+||||| .| ++||+|+|++++....
T Consensus 8 ~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~ 86 (275)
T 4eml_A 8 HYDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGG 86 (275)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC------
T ss_pred CCceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhccc
Confidence 367899998 8999999999995 79999999999999999999999999999999 88 5999999999886421
Q ss_pred CCCcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhcccc
Q 004726 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (733)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~ 154 (733)
..............++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~v 165 (275)
T 4eml_A 87 YIDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIV 165 (275)
T ss_dssp --------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHH
T ss_pred ccchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHh
Confidence 1111111112244566 679999999999999999999999999999999999999999999999999988899999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 155 G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
|..+|++|++||++++|+||+++||||+|+|++++++++.++|++|++.||.+++
T Consensus 166 G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 220 (275)
T 4eml_A 166 GQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIR------------------------- 220 (275)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999998875443
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++..... .....+.|.+.+..++.|+|++|++++|++||+|....
T Consensus 221 -----------~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 270 (275)
T 4eml_A 221 -----------CLKAAFNADCDG-QAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQ 270 (275)
T ss_dssp -----------HHHHHHHHTTSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCTT
T ss_pred -----------HHHHHHHhhhcc-chhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 455666665432 33444677788889999999999999999999998644
No 49
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1.4e-49 Score=411.50 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=218.4
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
+++.|.+++ +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~- 90 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVE- 90 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEET-
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhh-
Confidence 467899999 7999999999995 7999999999999999999999999999999999999999999998653221111
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~ 160 (733)
.... . + ..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 91 --~~~~-~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 91 --GRGL-G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp --TTEE-T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred --hhhh-h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 1111 1 2 23444 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 161 ~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
+|++||++++|+||+++||||+|||++++++++.++|+++++.+|.+++
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 213 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVA------------------------------- 213 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875433
Q ss_pred chHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 241 ~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.+
T Consensus 214 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 264 (265)
T 3qxi_A 214 -----ATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWTG 264 (265)
T ss_dssp -----HHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCCC
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 567888888888999999999999999999999999999999999988643
No 50
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=1.4e-49 Score=414.79 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=210.2
Q ss_pred CCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 2 AAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
+|+.+.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++ +|||||.|+.||+|+|++++..... ....
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 100 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPP-GGVE 100 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCT-THHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCc-chhh
Confidence 467899998 789999999999 58999999999999999999999999 9999999999999999998754221 1111
Q ss_pred c----cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCH
Q 004726 81 L----MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 81 ~----~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
. +....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus 101 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~ 179 (280)
T 2f6q_A 101 EKAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP 179 (280)
T ss_dssp HHHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCH
Confidence 1 112234555 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (733)
Q Consensus 157 ~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (733)
.+|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 180 ~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------- 232 (280)
T 2f6q_A 180 AKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALR--------------------------- 232 (280)
T ss_dssp HHHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999988764332
Q ss_pred hCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 004726 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (733)
Q Consensus 237 ~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~ 292 (733)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|
T Consensus 233 ---------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 233 ---------ISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp ---------HHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred ---------HHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 45677777766778899999999999999999999999999999986
No 51
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-49 Score=409.84 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=218.6
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-cccCCCCchhhhhccCCCccc
Q 004726 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
|+.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|+ +||+|+|++++..... ....
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~-~~~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGY-VGED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC---------CCS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhcccc-chhh
Confidence 56788998 789999999999 589999999999999999999999999999999998 9999999998754211 1111
Q ss_pred cc-chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 81 ~~-~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
.+ .....+++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11134555 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|+|++++.+++.++|+++++.+|.+++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 218 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR------------------------------ 218 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998865432
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~-~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++ ...+++++++.|. +.+..++.|+|++|++++|++||+|.+..
T Consensus 219 ------~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 268 (273)
T 2uzf_A 219 ------FLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQ 268 (273)
T ss_dssp ------HHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCSS
T ss_pred ------HHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCCC
Confidence 3455555 2346888999999 99999999999999999999999987643
No 52
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=4.5e-50 Score=416.81 Aligned_cols=253 Identities=22% Similarity=0.264 Sum_probs=216.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC-cccc
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (733)
|+.|.++.++++|++||||||+.|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 678999994458999999999999999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|||++++++++.++|++|+..++.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999876543
Q ss_pred hHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 242 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.... .+++..++.| ..++.|+|++|++++|++||+|.+..
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~g 268 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFTD 268 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC--
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 33444443322 2344445444 47889999999999999999988654
No 53
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=7.9e-50 Score=412.80 Aligned_cols=250 Identities=21% Similarity=0.308 Sum_probs=212.5
Q ss_pred EEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC-CCcccCCCCchhhhhccCCCcccccch
Q 004726 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMPD 84 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (733)
+.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||. |++||+|+|++++.... ......+..
T Consensus 7 v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~-~~~~~~~~~ 84 (260)
T 1sg4_A 7 VEPDA-GAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS-PAHYAGYWK 84 (260)
T ss_dssp EEEET-TTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC-HHHHHHHHH
T ss_pred EEEEe-cCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC-HHHHHHHHH
Confidence 33444 6889999999998899999999999999999999999999999999 79999999999875321 111112222
Q ss_pred hHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEe--CCceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 85 ~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~--~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
..++++ .+|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 85 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 163 (260)
T 1sg4_A 85 AVQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERA 163 (260)
T ss_dssp HHHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHH
Confidence 344556 67999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 164 lltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 210 (260)
T 1sg4_A 164 LQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQ--------------------------------- 210 (260)
T ss_dssp HHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998765432
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcC
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||++++
T Consensus 211 ---~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 211 ---LTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp ---HHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred ---HHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 4566677666667788899999999999999999999999999999876
No 54
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=3.5e-49 Score=412.75 Aligned_cols=257 Identities=25% Similarity=0.345 Sum_probs=217.0
Q ss_pred CCCCcEEEEEec-CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-cccCCCCchhhhhccCC-
Q 004726 1 MAAPRVTMEVGN-DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGA- 76 (733)
Q Consensus 1 m~~~~v~~~~~~-~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~- 76 (733)
|++++|.++. + ++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+ +||+|+|++++......
T Consensus 24 ~~~~~v~~~~-~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 24 EGFEDIRYEK-STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp TTCSSEEEEE-ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCeEEEEE-ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 4578899999 6 899999999995 79999999999999999999999999999999994 99999999988542211
Q ss_pred CcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCH
Q 004726 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
............++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|+|++|.
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~ 181 (289)
T 3t89_A 103 DDSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ 181 (289)
T ss_dssp -------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred hhhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH
Confidence 11111122344566 67999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (733)
Q Consensus 157 ~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (733)
.+|++|++||++++|+||+++||||+|+|++++++++.++|++|+..++.+++
T Consensus 182 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~--------------------------- 234 (289)
T 3t89_A 182 KKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALR--------------------------- 234 (289)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999998875433
Q ss_pred hCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 237 ~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 235 ---------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 235 ---------CLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp ---------HHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred ---------HHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 45666666543 233444578888889999999999999999999998654
No 55
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=2.6e-49 Score=412.27 Aligned_cols=255 Identities=19% Similarity=0.286 Sum_probs=205.3
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC--CCc-
Q 004726 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~~- 78 (733)
|+.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 56788998 789999999999 5899999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+.......+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 166 (276)
T 2j5i_A 87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ 166 (276)
T ss_dssp HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence 00111111222124578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~----------------------------- 217 (276)
T 2j5i_A 167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR----------------------------- 217 (276)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH--hCCH-HHHHHHHHHHhhh--hhcC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR--ATSK 294 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~--~~s~-~~~~~i~aF~~kr--~~~~ 294 (733)
.+|++++.+...+++++++.|.+.+..+ +.|+ |++|++++|++|| +|.+
T Consensus 218 -------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr~r~p~~ 271 (276)
T 2j5i_A 218 -------AAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDKSIKPGL 271 (276)
T ss_dssp -------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred -------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcccCCCCc
Confidence 5678888888889999999998887766 6799 9999999999998 5554
No 56
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=2.5e-49 Score=411.41 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=222.0
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC-cccc
Q 004726 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (733)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688998 8899999999996 89999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 223344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+ +++.+++.++|++++..||.+++
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~-------------------------------- 231 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVE-------------------------------- 231 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 99999999999999999999999 89999999999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr 290 (733)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||
T Consensus 232 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 232 ----STKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred ----HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 456777777777889999999999999999999999999999987
No 57
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=5.8e-49 Score=408.22 Aligned_cols=253 Identities=22% Similarity=0.321 Sum_probs=219.1
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC
Q 004726 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (733)
Q Consensus 1 m~~~~v~~~----~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~ 75 (733)
|+ +.+.++ . +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 45 568888 6 7899999999995 799999999999999999999999999999999999999999998862111
Q ss_pred CCcc----cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhc
Q 004726 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (733)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~ 151 (733)
.... ..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1110 01233345566 679999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHH
Q 004726 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231 (733)
Q Consensus 152 r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (733)
++|..+|++|++||++++|+||+++||||+| ++++++++.++|++++..+|.+++
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~---------------------- 216 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLA---------------------- 216 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHH----------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHH----------------------
Confidence 9999999999999999999999999999999 788999999999999998875433
Q ss_pred HHHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 232 ~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 217 --------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 266 (267)
T 3oc7_A 217 --------------ASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNWT 266 (267)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTTC
T ss_pred --------------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45677777777789999999999999999999999999999999998753
No 58
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=1.7e-49 Score=415.49 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=217.9
Q ss_pred CCCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC--
Q 004726 2 AAPRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (733)
+|+.|.++. +++|++|||| || +.|+||.+|+++|.++++.++.|+. |+|||||.|+.||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 467899998 8899999999 68 5799999999999999999998875 9999999999999999999885421101
Q ss_pred -cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCH
Q 004726 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 78 -~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
....+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111222344556 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (733)
Q Consensus 157 ~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (733)
.+|++|++||++++|+||+++||||+|+|++++.+++.++|+++++.+|.+++
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------- 230 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLE--------------------------- 230 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999998875432
Q ss_pred hCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HhhhhhcCCC
Q 004726 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 296 (733)
Q Consensus 237 ~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF-~~kr~~~~~~ 296 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++.+| ++||+|....
T Consensus 231 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 231 ---------ECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred ---------HHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 45777877777778999999999999999999999999999 9999998654
No 59
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=2.3e-49 Score=409.77 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=223.5
Q ss_pred CCCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCC--
Q 004726 2 AAPRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (733)
+|+.+.++. +++|++|||| || +.|++|.+|+++|.++++.++.|+ +|+|||||.|++||+|+|++++.......
T Consensus 3 ~~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~ 80 (261)
T 2gtr_A 3 RYRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRK 80 (261)
T ss_dssp CCSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHH
T ss_pred ccceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchh
Confidence 366799998 7899999999 68 579999999999999999999887 49999999999999999999875421101
Q ss_pred -cccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCH
Q 004726 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (733)
Q Consensus 78 -~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~ 156 (733)
....+....++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 159 (261)
T 2gtr_A 81 RESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGG 159 (261)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCH
Confidence 0111222344556 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004726 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (733)
Q Consensus 157 ~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (733)
.+|++|++||++++|+||+++||||+|+|++++.+++.+++++++..+|.+++
T Consensus 160 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------- 212 (261)
T 2gtr_A 160 ASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLE--------------------------- 212 (261)
T ss_dssp HHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999998875433
Q ss_pred hCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcC
Q 004726 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 237 ~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++.+|++||+|.+
T Consensus 213 ---------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f 261 (261)
T 2gtr_A 213 ---------ESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 261 (261)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC-
T ss_pred ---------HHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4567777777777899999999999999999999999999999999863
No 60
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-49 Score=410.43 Aligned_cols=247 Identities=25% Similarity=0.321 Sum_probs=192.8
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 2 ~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
+++.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++........ .
T Consensus 10 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~ 87 (258)
T 3lao_A 10 GPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASG-F 87 (258)
T ss_dssp SSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTB-C
T ss_pred CCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhh-H
Confidence 456799999 8899999999995 799999999999999999999999999999999999999999999876432221 1
Q ss_pred ccchhHHHHHHHHH-hcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHH
Q 004726 81 LMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 81 ~~~~~~~~~~~~~i-~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
.+.....+.+ .++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 88 ~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 166 (258)
T 3lao_A 88 RYPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166 (258)
T ss_dssp CCCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 2222222344 568 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|+|++++++++.++|++++..+|.+++
T Consensus 167 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 216 (258)
T 3lao_A 167 MRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVR------------------------------ 216 (258)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 217 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 217 ------AALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp ------HHHHHHHHHTC-------------------------------
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 567888888888999999999999999999999999999995
No 61
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=2.8e-49 Score=406.82 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=200.4
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCcccCCCCchhhhhccCCCcccccc
Q 004726 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (733)
+.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 67788 789999999999 589999999999999999999999999999999 999999999999886532111001122
Q ss_pred hhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHH
Q 004726 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (733)
Q Consensus 84 ~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ 163 (733)
...++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..+|++|+
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2344556 67999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchH
Q 004726 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (733)
Q Consensus 164 ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (733)
+||++++|+||+++||||+|+|++++++++.+++++++..+|.+++
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 204 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFI---------------------------------- 204 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHH----------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998865432
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 004726 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (733)
Q Consensus 244 ~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~ 291 (733)
.+|+.++.+...+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 205 --~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 205 --NTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred --HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 4567777777777899999999999999999999999999999874
No 62
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=7.4e-49 Score=405.55 Aligned_cols=254 Identities=33% Similarity=0.429 Sum_probs=224.4
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc
Q 004726 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 2 ~~~~v~~~~~--~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (733)
+|+.+.++.. .++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 80 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQD- 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHH-
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchH-
Confidence 4677777762 5689999999994 79999999999999999999999999999999999999999999875321100
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
.........+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 81 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 81 --CYSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp --HHHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 0000011123 4588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|+|++++++++.+++++++..+|.++
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 207 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIV------------------------------ 207 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887543
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 208 ------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~~ 258 (260)
T 1mj3_A 208 ------AMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFK 258 (260)
T ss_dssp ------HHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 356788888888899999999999999999999999999999999988753
No 63
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=5.7e-49 Score=405.22 Aligned_cols=248 Identities=24% Similarity=0.356 Sum_probs=220.5
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccch
Q 004726 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (733)
+.++ +++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++..............
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4555 5789999999995 899999999999999999999999999999999999999999998865310000000110
Q ss_pred -h-HHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 85 -V-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 85 -~-~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
. .++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|..+|++|
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l 157 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDL 157 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHH
Confidence 1 34556 679999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|+|++++.+++.+++++++..+|.++
T Consensus 158 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~---------------------------------- 203 (253)
T 1uiy_A 158 LLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSL---------------------------------- 203 (253)
T ss_dssp HHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH----------------------------------
T ss_pred HHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999876433
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhc
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~ 293 (733)
..+|+.++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.
T Consensus 204 --~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~ 252 (253)
T 1uiy_A 204 --RLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPR 252 (253)
T ss_dssp --HHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCC
T ss_pred --HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCC
Confidence 2567888888888999999999999999999999999999999998875
No 64
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=3e-49 Score=419.45 Aligned_cols=256 Identities=24% Similarity=0.269 Sum_probs=188.0
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-------cccCCCCchhhhhc
Q 004726 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (733)
Q Consensus 3 ~~~v~~~~~-~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~-------~F~aG~Dl~~~~~~ 73 (733)
|++|.++++ +++|++||||||+ .|+||.+|+++|.++|+.++.|+++|+|||||.|+ .||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 677999983 4899999999995 69999999999999999999999999999999996 89999999987432
Q ss_pred cC---C-------CcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEe-CCceEeCccccCCCCC
Q 004726 74 HG---A-------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (733)
Q Consensus 74 ~~---~-------~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~-~~a~f~~pe~~~Gl~P 142 (733)
.. . ............++ +.|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 11 0 00011112234555 67999999999999999999999999999999999 9999999999999999
Q ss_pred ChhhhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHH
Q 004726 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222 (733)
Q Consensus 143 ~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 222 (733)
++|++++|+|++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|+..+|.+++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~------------- 279 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQR------------- 279 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCC
Q 004726 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (733)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~ 296 (733)
.+|++++.... .+...+..|.+.+..++.|+|++|++.+|++||+|.+.+
T Consensus 280 -----------------------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~~ 329 (334)
T 3t8b_A 280 -----------------------MLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSP 329 (334)
T ss_dssp -----------------------HHHHHHHHTCC-CC-------------------------------------
T ss_pred -----------------------HHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 45667776643 445566778888899999999999999999999998654
No 65
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=1.2e-48 Score=408.77 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=222.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCc-ccCCCCchhhhhccCCCc--c
Q 004726 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGD--V 79 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~--~ 79 (733)
|+.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|+. ||+|+|++++........ .
T Consensus 7 ~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 68899999 7999999999999999999999999999999999999999999999965 566779998865321110 0
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
........+++ .++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|..+
T Consensus 86 ~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~ 164 (289)
T 3h0u_A 86 GPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGR 164 (289)
T ss_dssp STTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHH
Confidence 12334455677 6799999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (733)
|++|++||++++|+||+++||||+|||++++++++.++|++++..||.+++
T Consensus 165 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~----------------------------- 215 (289)
T 3h0u_A 165 ALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALI----------------------------- 215 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Q 004726 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 288 (733)
Q Consensus 239 ~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~ 288 (733)
.+|++++.... +++++++.|.+.+..++.|+|++|++++|++
T Consensus 216 -------~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 216 -------AAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -------HHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------HHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 56778888777 8999999999999999999999999999999
No 66
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=3.7e-49 Score=405.68 Aligned_cols=244 Identities=25% Similarity=0.381 Sum_probs=200.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... .
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~------~ 80 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT------E 80 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH------H
Confidence 56789998 8899999999995 79999999999999999999999999999999999999999999876431 1
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
..... ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 81 ----~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 81 ----LPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ----HHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 11223 4588999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVR-------------------------------- 203 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHhhhhhcC
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL---VMLDTSRGLVHVFFAQRATSK 294 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~---~~s~~~~~~i~aF~~kr~~~~ 294 (733)
.+|++++.+...+++++++.|.+.+... ..++|++|++.+|++||++.+
T Consensus 204 ----~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 204 ----ALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 5677888888888999999999997654 677888999999999999875
No 67
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.5e-48 Score=403.57 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=206.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccC--CCc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD 78 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~~ 78 (733)
|+++.+.++..+++|++||||||+.|++|.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++..... ...
T Consensus 3 ~~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (263)
T 3l3s_A 3 LSQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEG 82 (263)
T ss_dssp -----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCS
T ss_pred CCccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 346677777767899999999995599999999999999999999999999999999999999999998865311 011
Q ss_pred ---ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccC
Q 004726 79 ---VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (733)
Q Consensus 79 ---~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 155 (733)
...+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~-~g~~~~l~r~vG 160 (263)
T 3l3s_A 83 RAFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFC-TTPAVAVSRVIG 160 (263)
T ss_dssp HHHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCC-HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCCC-ccHHHHHHHHcC
Confidence 112223344566 679999999999999999999999999999999999999999999999995 678999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (733)
..+|++|++||++++|+||+++||||+|+|++++++++.++|++++..||.+++
T Consensus 161 ~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 214 (263)
T 3l3s_A 161 RRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLR-------------------------- 214 (263)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999998875433
Q ss_pred HhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 004726 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289 (733)
Q Consensus 236 ~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~k 289 (733)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|-+.
T Consensus 215 ----------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 215 ----------RGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 56788899889999999999999999999999999999999764
No 68
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-48 Score=400.91 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=210.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccc
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (733)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++| ++|+|||||.|++||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 45788998 8899999999995 7999999999999999999988 999999999999999999998311 1122
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 82 ~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 333445666 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|++ .+++.++|+++++.+|.+++
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~-------------------------------- 214 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQ-------------------------------- 214 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999986 46789999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
.+|++++.. .+++++++.|.+.+..++.|+|++|++.+|++||+|.+.
T Consensus 215 ----~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~ 262 (264)
T 3he2_A 215 ----HAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKFQ 262 (264)
T ss_dssp ----HHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 456677765 345667888999999999999999999999999998864
No 69
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=3.1e-48 Score=402.73 Aligned_cols=243 Identities=28% Similarity=0.448 Sum_probs=215.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
|+ +.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 44 5789998 7999999999995599999999999999999999999999999999999999999999875321 1122
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~ 160 (733)
.+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2233345666 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 161 ~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
+|++||++++|+||+++||||+|+|++++.+++.++|++++..|+.++
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------------- 225 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRAL-------------------------------- 225 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHH--------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999887543
Q ss_pred chHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhc
Q 004726 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (733)
Q Consensus 241 ~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~ 293 (733)
..+|++++.+...+++++++.|...+..++.|+ +||+|+
T Consensus 226 ----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 226 ----AAAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp ----HHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred ----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 356888999999999999999999999999998 888887
No 70
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=5.2e-48 Score=401.58 Aligned_cols=254 Identities=26% Similarity=0.411 Sum_probs=219.5
Q ss_pred CcEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCCCc
Q 004726 4 PRVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD 78 (733)
Q Consensus 4 ~~v~~~~---~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~ 78 (733)
..+.++. .+++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~ 86 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SE 86 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HH
Confidence 3455553 25789999999995 7999999999999999999999999999999998 69999999998754211 11
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 87 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 165 (272)
T 1hzd_A 87 VGPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSL 165 (272)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHH
Confidence 111222344556 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchH----HHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l----~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (733)
|++|++||++++|+||+++||||+|+|++++ .+.+.+++++++..+|.++
T Consensus 166 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~-------------------------- 219 (272)
T 1hzd_A 166 AKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAM-------------------------- 219 (272)
T ss_dssp HHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHH--------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHH--------------------------
Confidence 9999999999999999999999999998875 4567777777777665332
Q ss_pred HHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 235 ~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 220 ----------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~ 270 (272)
T 1hzd_A 220 ----------RVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYK 270 (272)
T ss_dssp ----------HHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCCC
T ss_pred ----------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 356788888888899999999999999999999999999999999998753
No 71
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=4.5e-47 Score=409.47 Aligned_cols=290 Identities=23% Similarity=0.310 Sum_probs=224.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCCCc--
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (733)
.+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 45788888 7899999999995 7999999999999999999999999999999998 89999999998864321111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHH
Q 004726 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (733)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~ 158 (733)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111112223455 57999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhcc------------CCC---------
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT------------DKL--------- 217 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~------------~~~--------- 217 (733)
|++|++||++++|+||+++||||+|||++++.+.+.++++ +...++..+....+. ..+
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998776554432 111111111100000 000
Q ss_pred ----CCcHHHHHHH-----HHHHHHHHHhCCCc-hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004726 218 ----GSLSEAREVL-----KLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (733)
Q Consensus 218 ----~~~~~~~~~~-----~~~~~~~~~~~~~~-~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (733)
+........+ ..+....++...+- .+...+|++++.+...+++++++.|.+.+..++.|+|++|++++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 0000000001 00112223333333 3677889999999999999999999999999999999999999999
Q ss_pred -hh-hhhcCCC
Q 004726 288 -AQ-RATSKVP 296 (733)
Q Consensus 288 -~k-r~~~~~~ 296 (733)
+| |+|++.+
T Consensus 321 ~eK~r~P~~~~ 331 (363)
T 3bpt_A 321 IDKDQSPKWKP 331 (363)
T ss_dssp TSCCCCCCCSS
T ss_pred eCCCCCCCCCC
Confidence 77 8887654
No 72
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=1.8e-47 Score=393.52 Aligned_cols=243 Identities=19% Similarity=0.307 Sum_probs=204.0
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccc
Q 004726 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (733)
Q Consensus 5 ~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (733)
.|.++. +++|++||||||+ .|++|.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... .....
T Consensus 8 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 84 (254)
T 3isa_A 8 PLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLRM 84 (254)
T ss_dssp SEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHHH
T ss_pred eEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHHH
Confidence 488998 8999999999995 899999999999999999987 5899999999999999999999886532111 11111
Q ss_pred hhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHH
Q 004726 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (733)
Q Consensus 84 ~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ 163 (733)
...++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|++++|..+|++|+
T Consensus 85 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ 160 (254)
T 3isa_A 85 VRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSIL 160 (254)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHH
Confidence 2234556 679999999999999999999999999999999999999999999999998 479999999999999999
Q ss_pred HcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchH
Q 004726 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (733)
Q Consensus 164 ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (733)
+||++++|+||+++||||+|+|++++.+++.+++++++..++.+++
T Consensus 161 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 206 (254)
T 3isa_A 161 GSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA---------------------------------- 206 (254)
T ss_dssp TTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCCCC
Q 004726 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (733)
Q Consensus 244 ~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~~~ 297 (733)
.+|+.+.. +.++.|.+.+..++.|+|++|++.+|++||+|.+.+.
T Consensus 207 --~~K~~l~~-------~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~~ 251 (254)
T 3isa_A 207 --TLHRVLRD-------DHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHHH 251 (254)
T ss_dssp --HHHHHHSC-------CCHHHHHHHHHHHHHSTTHHHHHHHHHHC--------
T ss_pred --HHHHHHhh-------hhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCCC
Confidence 23444421 2345688889999999999999999999999998763
No 73
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=2.8e-47 Score=389.49 Aligned_cols=238 Identities=23% Similarity=0.296 Sum_probs=213.1
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccch
Q 004726 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (733)
Q Consensus 6 v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (733)
..++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~-- 79 (243)
T 2q35_A 5 QLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV-- 79 (243)
T ss_dssp EEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC--
T ss_pred EEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH--
Confidence 34556 789999999999 589999999999999999999999999999999999999999999886532111 1 11
Q ss_pred hHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHH
Q 004726 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (733)
Q Consensus 85 ~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~l 164 (733)
++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++
T Consensus 80 --~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 156 (243)
T 2q35_A 80 --LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIY 156 (243)
T ss_dssp --CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred --HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHH
Confidence 2345 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCchHH
Q 004726 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (733)
Q Consensus 165 tG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (733)
||++++|+||+++||||+|+|++++.+++.+++++++..+|.+++
T Consensus 157 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 201 (243)
T 2q35_A 157 TGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLV----------------------------------- 201 (243)
T ss_dssp HCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHH-----------------------------------
T ss_pred cCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999998865433
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004726 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (733)
Q Consensus 245 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (733)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 202 -~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 202 -ALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred -HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 456777777667788999999999999999999999999875
No 74
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=2.6e-47 Score=415.27 Aligned_cols=288 Identities=18% Similarity=0.226 Sum_probs=225.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CcccCCCCchhhhhccCC----
Q 004726 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA---- 76 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~---- 76 (733)
++.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 41 ~~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~ 119 (407)
T 3ju1_A 41 FQTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQ 119 (407)
T ss_dssp EEEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSS
T ss_pred cceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccc
Confidence 34566776 7899999999995 7999999999999999999999999999999999 799999999998643110
Q ss_pred --CcccccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhcccc
Q 004726 77 --GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (733)
Q Consensus 77 --~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~ 154 (733)
.....+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus 120 ~~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~ 198 (407)
T 3ju1_A 120 VTEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMP 198 (407)
T ss_dssp CCHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSS
T ss_pred cHHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhh
Confidence 00112222233455 679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHH---H----------------HHHHHHHHHccCc----------
Q 004726 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARRK---------- 205 (733)
Q Consensus 155 G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~---~----------------a~~~a~~~a~~~~---------- 205 (733)
| .+|++|++||++++|+||+++||||+|||++++.+ + +.++++++.....
T Consensus 199 g-~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~ 277 (407)
T 3ju1_A 199 G-KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAE 277 (407)
T ss_dssp T-THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHH
T ss_pred H-HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHH
Confidence 9 99999999999999999999999999999999887 3 3333333321110
Q ss_pred --hhhhhhhccCCCCCcHHHHHHHH-------HHHH-HHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC
Q 004726 206 --PWIRSLHRTDKLGSLSEAREVLK-------LARL-QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 275 (733)
Q Consensus 206 --~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~ 275 (733)
..+..... ..+......+. .+.. ..+...+.-.+...+|++++.+...+++++++.|.+.+..++.
T Consensus 278 ~~~~I~~~f~----~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~ 353 (407)
T 3ju1_A 278 SQEMIDRLMA----GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCA 353 (407)
T ss_dssp THHHHHHHTC----SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc----CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC
Confidence 00111110 11111100000 0111 1122233455778889999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-hh-hhhcCCCC
Q 004726 276 LDTSRGLVHVFF-AQ-RATSKVPN 297 (733)
Q Consensus 276 s~~~~~~i~aF~-~k-r~~~~~~~ 297 (733)
++|++|++++|+ +| |+|++.+.
T Consensus 354 s~D~~EGvrAflidKdr~P~w~~~ 377 (407)
T 3ju1_A 354 KGDFCEGVRALLIDKDKQPKWQFA 377 (407)
T ss_dssp HSSHHHHHHHHTTSCCCCCCCSSS
T ss_pred CHHHHHHHHHHHhcCCcCCCCCCC
Confidence 999999999999 88 88888664
No 75
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=7.8e-47 Score=394.71 Aligned_cols=243 Identities=19% Similarity=0.185 Sum_probs=204.5
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCc-
Q 004726 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (733)
|+|+.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 6678899999 789999999999 5899999999999999999999999999999999999999999998754211110
Q ss_pred --cc---ccc----hhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEe-CCceEeCccccCCCCCChhhhh
Q 004726 79 --VS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPGFGGTQ 148 (733)
Q Consensus 79 --~~---~~~----~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~-~~a~f~~pe~~~Gl~P~~g~~~ 148 (733)
.. .+. ...++++ ..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 00 011 1123455 67899999999999999999999999999999999 9999999999999999999999
Q ss_pred hhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcc-----hHHHHHH-HHHHHHHccCchhhhhhhccCCCCCcHH
Q 004726 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 222 (733)
Q Consensus 149 ~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~-----~l~~~a~-~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 222 (733)
+|+|++|..+|++|++||++++|+||+++||||+|||++ ++.+++. ++|++++..+|.+++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~------------- 230 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCL------------- 230 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHH-------------
Confidence 999999999999999999999999999999999999885 7888885 999999998875433
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhc
Q 004726 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (733)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~ 293 (733)
.+|++++.... ..++ ...++|+++++.+|++||++.
T Consensus 231 -----------------------~~K~~l~~~~~----~~l~--------~~~~~d~~e~~~af~~kr~~e 266 (280)
T 1pjh_A 231 -----------------------GMKKLLKSNHI----DAFN--------KANSVEVNESLKYWVDGEPLK 266 (280)
T ss_dssp -----------------------HHHHHHHTTTH----HHHH--------HHHHHHHHHHHHHHHHTHHHH
T ss_pred -----------------------HHHHHHHHhHH----HHHH--------HhhhHHHHHHHHHHhCCccHH
Confidence 34556654332 2222 125889999999999999884
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=4.2e-46 Score=378.31 Aligned_cols=230 Identities=23% Similarity=0.253 Sum_probs=201.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
|+ +.|.++. +++|++||||||+.|++|.+|+++|.++++.+++| ++|+|||||.|++||+|+|++++..... ....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~-~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA-KPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C-HHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh-HHHH
Confidence 55 5688998 88999999999989999999999999999999987 6899999999999999999999865321 1122
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~ 160 (733)
.+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2333345666 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004726 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (733)
Q Consensus 161 ~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (733)
++++||++++|+||+++||||+|+|++++.+++.++|+++++.||.+++
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 206 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHN------------------------------- 206 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875443
Q ss_pred chHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 004726 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 271 (733)
Q Consensus 241 ~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~ 271 (733)
.+|++++.....+++++++.|.+.|.
T Consensus 207 -----~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 207 -----ATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp -----HHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 45677777777788899998888763
No 77
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=4.3e-46 Score=384.06 Aligned_cols=239 Identities=15% Similarity=0.214 Sum_probs=204.5
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc
Q 004726 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (733)
Q Consensus 3 ~~~v~~~~~~~-~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (733)
|+.+.++. ++ +|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 56789998 67 99999999994 79999999999999999999999999999999999999999999875421111111
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeC-ccccCCCCCChhhhhhhccccCHHHH
Q 004726 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKA 159 (733)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~-pe~~~Gl~P~~g~~~~l~r~~G~~~a 159 (733)
.+.....+++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1222234556 6789999999999999999 5999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004726 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (733)
Q Consensus 160 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (733)
++|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 228 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLR------------------------------ 228 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 004726 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (733)
Q Consensus 240 ~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~ 291 (733)
.+|++++.....+++++++.| ...|++++|++||.
T Consensus 229 ------~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~~ 263 (263)
T 2j5g_A 229 ------YTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRNT 263 (263)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC-
T ss_pred ------HHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhccC
Confidence 456666666555555655554 45699999999873
No 78
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.1e-45 Score=375.05 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=199.7
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccc
Q 004726 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (733)
+.+.++. +++|++||||||+.|++|.+|+++|.++++.++.| +|+|||||.|++||+|+|++++.... .....+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~--~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSA--EAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCH--HHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhCh--HHHHHHH
Confidence 4688898 88999999999988999999999999999999976 48999999999999999999986521 1122233
Q ss_pred hhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHHHHHH
Q 004726 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (733)
Q Consensus 84 ~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l 162 (733)
...++++ .++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++++++++++++|..+|++|
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3445666 6799999999999999999999999999999999998 8999999999999888889999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCch
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (733)
++||++++|+||+++||||+|+|++++.+++.++|+++++.||.+++
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHK--------------------------------- 206 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 004726 243 QHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (733)
Q Consensus 243 a~~~~~~~i~~~~~~~~~~~l~~E~~~~ 270 (733)
.+|++++.....+++++++.|.+.|
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 207 ---KTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 5677888888888999999998764
No 79
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=1.5e-44 Score=380.96 Aligned_cols=255 Identities=18% Similarity=0.192 Sum_probs=215.5
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEcCCCcccCCCCchhhh
Q 004726 3 APRVTMEVG-NDGVAIITLINPP-----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (733)
Q Consensus 3 ~~~v~~~~~-~~~i~~i~l~~p~-----~Nal~~~~~~~l~~~l~~~~~-----d~~v~~vvl~g~g~~F~aG~Dl~~~~ 71 (733)
|+++.+..+ +++|++||||||+ +|+||.+|+++|.++++.++. |+++|+|||+|.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 556666542 7889999999983 559999999999999999987 58999999999999999999999986
Q ss_pred hccCCCcccc---cchhHHHHHHHHH---hcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChh
Q 004726 72 KVHGAGDVSL---MPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFG 145 (733)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~i---~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g 145 (733)
.......... +.......+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 5321111111 111122222 223 468999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHH
Q 004726 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 225 (733)
Q Consensus 146 ~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 225 (733)
++++|+|++|..+|++|++||++++|+||+++||||+|||++++++++.++|++++. +|.+
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a------------------ 248 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHA------------------ 248 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHH------------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHH------------------
Confidence 999999999999999999999999999999999999999999999999999999985 5432
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhcCC
Q 004726 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (733)
Q Consensus 226 ~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~~~~ 295 (733)
...+|++++.....+++++++.|.+.+..++.|+|....+..++.+++.++.
T Consensus 249 ------------------~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~~ 300 (305)
T 3m6n_A 249 ------------------WAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRS 300 (305)
T ss_dssp ------------------HHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC---
T ss_pred ------------------HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhcc
Confidence 2357888999999999999999999999999999998888877777665543
No 80
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=5e-44 Score=381.56 Aligned_cols=204 Identities=25% Similarity=0.334 Sum_probs=174.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+|++|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 4578899999 8999999999995 7999999999999999999999999999999999999999999988653211100
Q ss_pred -----------------------------cccchhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCce
Q 004726 80 -----------------------------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (733)
Q Consensus 80 -----------------------------~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~ 130 (733)
..+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 00111223444 568899999999999999999999999999999999999
Q ss_pred EeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhh
Q 004726 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (733)
Q Consensus 131 f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~ 209 (733)
|++||+++|++|++| +|++++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|+..|+.+++
T Consensus 190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~ 265 (333)
T 3njd_A 190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLI 265 (333)
T ss_dssp EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999876 5899999999999999999999999999999999999999999999999999999876544
No 81
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=2.9e-44 Score=369.74 Aligned_cols=237 Identities=18% Similarity=0.236 Sum_probs=200.5
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccccc
Q 004726 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (733)
+.+.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689998 789999999999 57999999999999999999999999999999999999999999987531 11111112
Q ss_pred chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeC-ccccCCCCCChhhhhhhccccCHHHHHH
Q 004726 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (733)
Q Consensus 83 ~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~-pe~~~Gl~P~~g~~~~l~r~~G~~~a~~ 161 (733)
....++++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|++++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 22234556 6789999999999999999 5999999999999999999999 9999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCc
Q 004726 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (733)
Q Consensus 162 l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (733)
|++||++++|+||+++||||+|+|++++.+++.++|++++..+|.+++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 219 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARR-------------------------------- 219 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 004726 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (733)
Q Consensus 242 ~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~ 291 (733)
.+|++++.....+++++++.|.. .+++++|-.+-+
T Consensus 220 ----~~K~~l~~~~~~~l~~~l~~~~~-----------~eg~~a~~~~~~ 254 (257)
T 1szo_A 220 ----YARKVLTRQLRRVMEADLSLGLA-----------HEALAAIDLGME 254 (257)
T ss_dssp ----HHHHHHSHHHHHHHHHHHHHHHH-----------HHHHHHHHHC--
T ss_pred ----HHHHHHHhhhhccHHHHHHHHHH-----------Hhhhhhhhcccc
Confidence 45566666655566666665543 367888876544
No 82
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=2.4e-44 Score=390.72 Aligned_cols=246 Identities=23% Similarity=0.213 Sum_probs=201.0
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC--------C-CcccCCCCchhhhhc
Q 004726 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (733)
Q Consensus 4 ~~v~~~~~~~~i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~--------g-~~F~aG~Dl~~~~~~ 73 (733)
+.|.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 789999999999 5799999999999999999999999999999994 6 799999999998653
Q ss_pred cCCCccc---ccchhHHHHHHHHH------------hcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccC
Q 004726 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (733)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~i------------~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~ 138 (733)
....... ......+.++ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001123333 333 47999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhhhhhccCCCC
Q 004726 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG 218 (733)
Q Consensus 139 Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~ 218 (733)
|++|++| +++|+|++|..+|++|++||++|+|+||+++||||+|||++++++++.+++.+++. .
T Consensus 325 Gl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~------------ 388 (440)
T 2np9_A 325 GIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---D------------ 388 (440)
T ss_dssp CCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---H------------
T ss_pred CcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---H------------
Confidence 9999887 68999999999999999999999999999999999999999999999988877632 1
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhhcCCH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 004726 219 SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG---YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (733)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~---~~~l~~E~~~~~~~~~s~~~~~~i~aF~~kr~~ 292 (733)
++..+|++++.... +. .+.++.|...+..++.|+|++|++.+|++||++
T Consensus 389 ------------------------Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 389 ------------------------AVLANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp ------------------------HHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred ------------------------HHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 12245666666544 33 355667788889999999999999999999863
No 83
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=1.2e-43 Score=369.81 Aligned_cols=205 Identities=27% Similarity=0.351 Sum_probs=173.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcc
Q 004726 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (733)
Q Consensus 1 m~~~~v~~~~~~~~i~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (733)
|+|+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||+|.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4678899999 8899999999995 8999999999999999999999999999999999999999999988653221111
Q ss_pred c-cc---chhHHHHHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccC
Q 004726 80 S-LM---PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (733)
Q Consensus 80 ~-~~---~~~~~~~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G 155 (733)
. .. .....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+++++.+ ++++|
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG 172 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELG 172 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcC
Confidence 0 11 11223455 5789999999999999999999999999999999999999999999999 55555544 99999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhh
Q 004726 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (733)
Q Consensus 156 ~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~ 209 (733)
..+|++|++||++++|+||+++||||+|||++++++++.++|+++++.|+.+++
T Consensus 173 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~ 226 (279)
T 3t3w_A 173 PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALR 226 (279)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999998875443
No 84
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.8e-42 Score=367.04 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=221.5
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCH-HHHHHHhhccccccCc-c
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ-DKANNALKMLKGVLDY-S 383 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~-~~~~~~~~~i~~~~~~-~ 383 (733)
++++||+|||+|+||++||..|+++|++|++||+++++++++.+.+++.++.+++.|.++. .+....++++.+++++ +
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 3578999999999999999999999999999999999999999999999998888875432 1123456788888888 5
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCC
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~ 463 (733)
++++||+||+||||++++|+.+++++.+.+++++||+|+||+++++++++.+.++.+++|+|||+|++.++++|+++++.
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~ 163 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCC
Confidence 78999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCCCcchhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHh
Q 004726 464 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDL 537 (733)
Q Consensus 464 t~~e~~~~~~~l~~~lG~~~v~v-~d~pGfi~nRl~~~~~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p---~Gpf~~~D~ 537 (733)
|++++++++.++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||.++ .++|+| +|||+++|+
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl 243 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHh
Confidence 99999999999999999999999 589999999999999999999999986 999999999 789987 899999999
Q ss_pred hchHHHHHHHHHHH
Q 004726 538 AGYGVAAATSKEFD 551 (733)
Q Consensus 538 ~Gld~~~~~~~~l~ 551 (733)
.| +.+.+.++++.
T Consensus 244 ~g-~g~~~~~~~~~ 256 (319)
T 2dpo_A 244 NA-EGMLSYSDRYS 256 (319)
T ss_dssp TT-TSHHHHHHHHH
T ss_pred cC-chHHHHHHHHh
Confidence 98 66666665543
No 85
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=1.4e-39 Score=355.08 Aligned_cols=204 Identities=25% Similarity=0.333 Sum_probs=183.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEc-CCCcccCCCCchh
Q 004726 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (733)
Q Consensus 3 ~~~v~~~~~~~~i~~i~l~~p~-----------~Nal~~~~~~~l~~~l~~~~~d-~~v~~vvl~g-~g~~F~aG~Dl~~ 69 (733)
|++|.++. +++|++||||||+ .|++|.+|+.+|.++++.++.| +++|+||||| .|+.||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 45788998 7899999999995 6999999999999999999999 9999999999 8999999999999
Q ss_pred hhhccCCCcccccchhHHHHHHHHH----hcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC--ceEeCcccc-CCCCC
Q 004726 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (733)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~--a~f~~pe~~-~Gl~P 142 (733)
+...... ....+....++++ ..| .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|
T Consensus 99 l~~~~~~-~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTHA-WKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCHH-HHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred HhhcccH-HHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 8653211 1111222344555 567 8999999999999999999999999999999999 999999999 99999
Q ss_pred Chhhhhhhc--cccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchhhh
Q 004726 143 GFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (733)
Q Consensus 143 ~~g~~~~l~--r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~ 209 (733)
++|++++|+ |++|..+|++|++||++++|+||+++||||+|+|++++.+++.++|++++..++.+++
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~ 245 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAH 245 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHh
Confidence 999999999 9999999999999999999999999999999999999999999999999999887654
No 86
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.88 E-value=1.5e-23 Score=186.43 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=85.6
Q ss_pred HcCCeeE-EEcCCCCcchhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004726 478 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (733)
Q Consensus 478 ~lG~~~v-~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (733)
.++|.+| +++|.||||+||++.+++|||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3688899 88999999999999999999999999997 999999999 79999999999999999999999999999988
Q ss_pred CC-CCCCcHHHHHHHHcCCCCcccCcc
Q 004726 555 PD-RSFQSPLVDLLLKSGRNGKANGKG 580 (733)
Q Consensus 555 ~~-~~~~~~~l~~~v~~g~~G~k~g~G 580 (733)
++ ++.|+++|++|+++|++|+|||+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 87 556999999999999999999998
No 87
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.88 E-value=3.1e-22 Score=223.25 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=135.8
Q ss_pred cCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHH
Q 004726 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 501 (733)
Q Consensus 422 ~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~ 501 (733)
.+++.+.++. ...+|.++++.|+++ ++++|+++++.|++++++.+.++++.+|+.|+.++|.||||+||++.++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 4666766665 345688999999987 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHcCCCCccc
Q 004726 502 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGKAN 577 (733)
Q Consensus 502 ~~Ea~~l~~~Gv-~~~dID~a~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~-~~~~~~~l~~~v~~g~~G~k~ 577 (733)
+|||++++++|+ +|+|||.++ .++|||+|||+|+|.+|+|+++++++.+++.+++ ++.|+++|++|+++|++|..-
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 999999999998 999999999 8999999999999999999999999999999987 555999999999999866443
No 88
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.80 E-value=1.5e-20 Score=215.03 Aligned_cols=168 Identities=20% Similarity=0.213 Sum_probs=142.8
Q ss_pred cCcEEEEEeCCC-CCCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHH
Q 004726 12 NDGVAIITLINP-PVNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (733)
Q Consensus 12 ~~~i~~i~l~~p-~~Na--l~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (733)
+++|++|++|+| ..|+ ++..+.++|.++|+.++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 578999999999 4677 6889999999999999999999999999874 477775421 1234
Q ss_pred HHHHHHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccc------------cCCCCCCh------------
Q 004726 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPGF------------ 144 (733)
Q Consensus 89 ~~~~~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~------------~~Gl~P~~------------ 144 (733)
.+ .++..++|||||+|+|.|.|||+.|+++||+|+|++++.|+.+++ ++|+.|..
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 45 568889999999999999999999999999999999999999985 68987632
Q ss_pred -hhh---------------hhhccccCHHH-----HHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHH
Q 004726 145 -GGT---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 197 (733)
Q Consensus 145 -g~~---------------~~l~r~~G~~~-----a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a 197 (733)
+.+ .++++.++..+ +.+++++|+.++|+||+++||||+|++.+++.+.+.+++
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a 515 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA 515 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHc
Confidence 233 56778888888 899999999999999999999999999888888777654
No 89
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.79 E-value=2.9e-20 Score=165.09 Aligned_cols=92 Identities=25% Similarity=0.364 Sum_probs=85.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCC
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 697 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~-~~~p~ 697 (733)
+++||+||++.+++|||++|++|||+ +++|||.+|++|+|||+ |||+++|.+|+|.++++++.+++.+++ +|.|+
T Consensus 15 ~~gfi~nRll~~~~~eA~~ll~eGva-~~~dID~a~~~g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~ 90 (110)
T 3ctv_A 15 TDKINPMDFTFVEINEAVKLVEMGVA-TPQDIDTAIKLGLNRPF---GPFELAKQFGAEQIAKRLEELAKQFGKKIFEPA 90 (110)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHTTCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 57899999999999999999999999 99999999999999999 999999999999999999999999988 89999
Q ss_pred HHHHHHHHCCCCc--cccc
Q 004726 698 RFLEERATKGIPL--VRII 714 (733)
Q Consensus 698 ~~l~~~~~~g~~g--~g~g 714 (733)
++|++|+++|++| +|+|
T Consensus 91 ~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 91 KTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp HHHHTTTHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCCccCCCC
Confidence 9999999999999 5766
No 90
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.78 E-value=1.2e-18 Score=177.07 Aligned_cols=167 Identities=19% Similarity=0.188 Sum_probs=129.4
Q ss_pred cCcEEEEEeCCC-CCCC-----CC--HHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccc
Q 004726 12 NDGVAIITLINP-PVNA-----LA--IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (733)
Q Consensus 12 ~~~i~~i~l~~p-~~Na-----l~--~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (733)
+++|++|+++.+ ..+. ++ .-.+++|.++|+.++.|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 468999999887 2221 11 0136899999999999999999999986 6788886532
Q ss_pred hhHHHHHHHHHhc-CCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCc---------------------cccCCCC
Q 004726 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (733)
Q Consensus 84 ~~~~~~~~~~i~~-~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~p---------------------e~~~Gl~ 141 (733)
...+.+ +.+.. ++|||||+++|.|.|||++|+++||+|+|++++.|+++ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 122444 45676 89999999999999999999999999999999999999 6677877
Q ss_pred CChhhhh--------------------------hhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcCcchHHHHHHH
Q 004726 142 PGFGGTQ--------------------------RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 195 (733)
Q Consensus 142 P~~g~~~--------------------------~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~ 195 (733)
++.+..+ .-.|.+......+ +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 7765322 2234455554444 789999999999999999999998887776666
Q ss_pred HH
Q 004726 196 WA 197 (733)
Q Consensus 196 ~a 197 (733)
++
T Consensus 223 ~~ 224 (240)
T 3rst_A 223 DH 224 (240)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 91
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.77 E-value=2.9e-19 Score=190.01 Aligned_cols=203 Identities=17% Similarity=0.207 Sum_probs=158.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+||+|||+|.||.++|..|+++|+ +|++||+++++++.....+..... ......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 999999999887753211111100 0011235666677788999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEE--EecCCCCCHHHHhcccCC-CCcEEEEecCCCC
Q 004726 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 450 (733)
Q Consensus 388 aDlVI~av--------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~~-~~~~ig~h~~~p~ 450 (733)
||+||+++ +++.++++++++++.++++ ++++ +||++.+....+.+.... |+|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7766 577666666666666554 6788764
Q ss_pred CCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhh---hhHHHHHHH-------HHHHHcCC-CHHHHH
Q 004726 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 519 (733)
Q Consensus 451 ~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nR---l~~~~~~Ea-------~~l~~~Gv-~~~dID 519 (733)
.|+.++......+.+.+|+. .++.+||++|| .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36788888899999999987 47999999999 888999998 88899985 999999
Q ss_pred HHHHhcCCCccHHHHHHhhch-HHHHHHH
Q 004726 520 SAIRSFGLPIGPFQLLDLAGY-GVAAATS 547 (733)
Q Consensus 520 ~a~~~~G~p~Gpf~~~D~~Gl-d~~~~~~ 547 (733)
.++... ++|||+++|..|. ++.+.+.
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~~a 237 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFAPA 237 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHHHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHHHH
Confidence 998433 7899999998887 5554433
No 92
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.75 E-value=6e-18 Score=176.43 Aligned_cols=188 Identities=15% Similarity=0.096 Sum_probs=145.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC---eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~---~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
.+||+|||+|.||.+|+..|+++|+ +|++||++++++++..+. . .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------------------~-gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------------------C-GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------------------T-CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------------------c-CCEEeCChHH
Confidence 3689999999999999999999999 999999999987765321 0 23344444 6
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHh-CCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEE-ecC
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI-VRT 461 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~-~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lvei-v~~ 461 (733)
.+++||+||+||| ++...++++++.+. ++++++|+|++++++++.+.+.+..+.+++++||+.|...+..+++ +++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999998 67888999999988 8889888999999999999988887789999999999988887774 568
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--------CCcchhhhhHHHHHHHHH--HHHcCCCHHHHHHHH
Q 004726 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--------TGFAVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (733)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--------pGfi~nRl~~~~~~Ea~~--l~~~Gv~~~dID~a~ 522 (733)
+.++++.++.+.++++.+|+.+++..+. .| -..-+++. +.|++. .++.|+++++.-.++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v~~E~~~d~~talsg-sgpa~~~~-~~eal~~a~v~~Gl~~~~a~~l~ 206 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSG-SGPAYIFL-IMEALQEAAEQLGLTKETAELLT 206 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEECSSHHHHHHHHHHTT-SHHHHHHH-HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEECCHHHhhHHHHHhc-cHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHH
Confidence 8899999999999999999855432321 11 00112222 223332 346788887766665
No 93
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.75 E-value=8.1e-18 Score=167.99 Aligned_cols=148 Identities=23% Similarity=0.309 Sum_probs=125.3
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHH
Q 004726 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (733)
Q Consensus 12 ~~~i~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (733)
.+.|++|++++ ++++.+.+.|.++|+.++++ ++++|||+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 46799999985 69999999999999999864 6999999865 667776432 2455
Q ss_pred HHHhcCCCcEEEEe---CCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhh---------------hhhccc
Q 004726 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGT---------------QRLPRL 153 (733)
Q Consensus 92 ~~i~~~~kp~Iaav---~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~---------------~~l~r~ 153 (733)
+.|..+++|||++| +|.|.|+|+.|+++||+|+++++++|+.+++..+. |+.|.+ ..+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 66889999999999 99999999999999999999999999999987532 555543 146777
Q ss_pred cCH--HHHHHHHHcCCCCCHHHHHHcCCccEEcCc
Q 004726 154 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186 (733)
Q Consensus 154 ~G~--~~a~~l~ltG~~i~a~eA~~~Glv~~vv~~ 186 (733)
.|. ..+.+++.++..++|+||+++||||+|++.
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 785 789999999999999999999999999964
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.72 E-value=2.2e-17 Score=171.11 Aligned_cols=211 Identities=10% Similarity=0.026 Sum_probs=154.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCe-eEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
.||+|||+|.||..+|..|++.|++ |++||++++++++..+.+ .+..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 4799999999999999999999999 999999998877643210 13334455 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCC-----CCCCeeEEecC
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 461 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~-----~~~~lveiv~~ 461 (733)
+||+||+|+|++ ...++++++.+.++++++|++++++.+.+.+.+.... .-..|+++|. ...+.+.++.
T Consensus 68 ~~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPH---YGVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSS---EEEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHh---ccCcCCceecCCCchhhcCCCeEEE-
Confidence 999999999954 4478888888888899999999998888776554433 2235776642 1223333332
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--CCc-----chhhhh--HHHHHHHHHHHHcCCCHHHHHHHH-Hh------c
Q 004726 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-RS------F 525 (733)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--pGf-----i~nRl~--~~~~~Ea~~l~~~Gv~~~dID~a~-~~------~ 525 (733)
..++++.++.+.++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .. .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2358999999999999999999999754 456 677765 344456633 46699888875544 21 2
Q ss_pred ---CCCccHHHHHHhhchHHHHHHHHH
Q 004726 526 ---GLPIGPFQLLDLAGYGVAAATSKE 549 (733)
Q Consensus 526 ---G~p~Gpf~~~D~~Gld~~~~~~~~ 549 (733)
+.++||++..|..|++.....++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 346799999999999988876653
No 95
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.69 E-value=3.6e-16 Score=165.44 Aligned_cols=155 Identities=16% Similarity=0.174 Sum_probs=123.6
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
.++||+|||+|.||.++|..|+++|+ +|++||+++++++.+. +.|.++ ..++++ +
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~~-----------~~~~~~~~ 89 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGIID-----------EGTTSIAK 89 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSCS-----------EEESCTTG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCcc-----------hhcCCHHH
Confidence 45799999999999999999999999 9999999998877642 223211 234454 5
Q ss_pred -ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEEecCCCCC---------
Q 004726 384 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH--------- 451 (733)
Q Consensus 384 -~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~~~ig~h~~~p~~--------- 451 (733)
.+++||+||+||| +....++++++.+.++++++|++.+|+.. +..+.+.+. .+|++.||+.++.
T Consensus 90 ~~~~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~~ 165 (314)
T 3ggo_A 90 VEDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSLD 165 (314)
T ss_dssp GGGGCCSEEEECSC--GGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCCT
T ss_pred HhhccCCEEEEeCC--HHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhhh
Confidence 6899999999999 44567888999999999999988776643 445554443 2899999988654
Q ss_pred ---CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004726 452 ---VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (733)
Q Consensus 452 ---~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 487 (733)
.+..+.+++++.++++.++.+.++++.+|+++++++
T Consensus 166 ~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~ 204 (314)
T 3ggo_A 166 NLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMS 204 (314)
T ss_dssp TTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred hhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 345788888888999999999999999999999885
No 96
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.69 E-value=1.5e-16 Score=168.10 Aligned_cols=190 Identities=14% Similarity=0.109 Sum_probs=133.9
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
+|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..+++. +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------A-------------GASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------T-------------TCEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeEcCCHHHHH
Confidence 3579999999999999999999999999999999998776422 1 23344555 668
Q ss_pred CCCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCCC----CCCee
Q 004726 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH----VMPLL 456 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~~----~~~lv 456 (733)
++||+||+|||++..++..+.. ++.+.++++++|++.+++.+.. .+.+.+. ...+|+. +|+.+.. ...++
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~~~g~l~ 136 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGAAAGTLT 136 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHHHHTCEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhHhcCCce
Confidence 8999999999976665554431 6777788888876544433332 3444332 2334554 2332221 12234
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----chhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf-----i~nRl~~----~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
.++.+ +++.++.+.++++.+|++++++++ +|. ++|+++. .+++|++.+.+. |+++++++.++ .+.
T Consensus 137 ~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~-~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 212 (302)
T 2h78_A 137 FMVGG---DAEALEKARPLFEAMGRNIFHAGP-DGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSS 212 (302)
T ss_dssp EEEES---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred EEeCC---CHHHHHHHHHHHHHhCCCeEEcCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 44444 799999999999999999999976 443 2555544 478899998876 89999999998 444
No 97
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.69 E-value=7e-17 Score=169.52 Aligned_cols=187 Identities=17% Similarity=0.178 Sum_probs=133.8
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.|+||+|||+|.||.+||.+|+++||+|++|||++++++... +.| ....+++ +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~-----------~~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-----------AAG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HcC-------------CEEcCCHHHHH
Confidence 367999999999999999999999999999999999877642 222 2334444 678
Q ss_pred CCCCEEEEeccCChHHHHHHHHH--HHHhCCCCeEEEecCCCCCHHHH---hcccCCCCcEEEEecCCCCCCC-------
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSE--LEKACPPHCILATNTSTIDLNIV---GEKTSSQDRIIGAHFFSPAHVM------- 453 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~--l~~~~~~~~ii~s~tS~~~~~~l---~~~~~~~~~~ig~h~~~p~~~~------- 453 (733)
++||+||.|+|++.++...++.. +.+.++++++|++ +||..+... ++.+... |+||.+.|..+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId-~sT~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~ 132 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLE-CSTIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAA 132 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEE-CSCCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHH
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHh
Confidence 99999999999777776665542 6667788888864 555555533 3333221 56666555332
Q ss_pred -CeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----chhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 454 -PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 454 -~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf-----i~nRl~~----~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
.+.-++.| +++++++++++++.+|++++++++ +|- ++|.++. ..+.|++.+.+. |++++.+-.++
T Consensus 133 G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~-~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl 208 (300)
T 3obb_A 133 GTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGP-DGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (300)
T ss_dssp TCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 33444455 799999999999999999999987 342 3344432 335699998876 89999999888
Q ss_pred -HhcC
Q 004726 523 -RSFG 526 (733)
Q Consensus 523 -~~~G 526 (733)
.+.+
T Consensus 209 ~~~~~ 213 (300)
T 3obb_A 209 RRSSG 213 (300)
T ss_dssp HTSTT
T ss_pred HhCcc
Confidence 4443
No 98
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=1.1e-16 Score=164.03 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=142.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC----eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~----~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
+||+|||+|.||.++|..|+++|+ +|++||++++++++..+.. .+..+++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChHH
Confidence 589999999999999999999998 9999999999877653210 23334444 5
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCC-eeEEecCC
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 462 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~-lveiv~~~ 462 (733)
.+++||+||+|+| ++...++++++.+.++++++|+|.++++++..+.+.+....++++.||+.|..... ...+++++
T Consensus 60 ~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 6789999999997 66778888999888899999999999999998888777677899999999988776 66777888
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCC-----Ccchh-hhhHHHHHHHHHH--HHcCCCHHHHHHHH
Q 004726 463 RTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN-RAFFPYSQSARLL--VSLGVDVFRIDSAI 522 (733)
Q Consensus 463 ~t~~e~~~~~~~l~~~lG~~~v~v~d~p-----Gfi~n-Rl~~~~~~Ea~~l--~~~Gv~~~dID~a~ 522 (733)
.++++.++.++++++.+|+ ++++.+.. +.... ..+...+.|++.. .+.|+++++..+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55554311 00000 0112233455443 46689998888877
No 99
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.65 E-value=1.7e-16 Score=167.58 Aligned_cols=96 Identities=25% Similarity=0.340 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHh-CC-CCCCC
Q 004726 620 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GN-FFKPS 697 (733)
Q Consensus 620 ~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~-~~-~~~p~ 697 (733)
++++.||++.+++||+++++++|++ ++++||.++..|+|||+ |||+++|.+|+|.++++++.+++.+ ++ +|.|+
T Consensus 203 ~g~i~nr~l~~~~~Ea~~l~~~g~~-~~~~id~~~~~g~g~p~---GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 278 (302)
T 1f0y_A 203 PGFIVNRLLVPYLMEAIRLYERGDA-SKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPS 278 (302)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcC
Confidence 4688999999999999999999998 89999999999999996 9999999999999999999999888 77 59999
Q ss_pred HHHHHHHHCCCCc--cccceeecC
Q 004726 698 RFLEERATKGIPL--VRIIFHRFS 719 (733)
Q Consensus 698 ~~l~~~~~~g~~g--~g~gfy~y~ 719 (733)
++|++|+++|++| +|+|||+|+
T Consensus 279 ~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 279 PSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHcCCCccccCcEeeeCC
Confidence 9999999999999 899999994
No 100
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.65 E-value=1.5e-16 Score=168.53 Aligned_cols=190 Identities=13% Similarity=0.109 Sum_probs=134.7
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
..|+||+|||+|.||.+||..|+++|++|++||+++++++...+ . .+..++++ +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------H-------------GASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCeEcCCHHHH
Confidence 45679999999999999999999999999999999998776421 1 23344555 66
Q ss_pred cCCCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCHHH---HhcccC-CCCcEEEEecCCCC----CCCC
Q 004726 385 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLNI---VGEKTS-SQDRIIGAHFFSPA----HVMP 454 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~-~~~~~ig~h~~~p~----~~~~ 454 (733)
+++||+||+|||++..++..++ +++.+.++++++|++. |+..+.. +.+.+. ....|+. ||.... ....
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~-st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~ 152 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDM-STVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQ 152 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTC
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEEC-CCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCC
Confidence 7899999999997666665444 5677788889888654 4444432 222222 2223443 332111 1123
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004726 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-R 523 (733)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~-~ 523 (733)
+..++.+ ++++++.+.++++.+|+.++++++ +| ++.|.++ .+.++|++.+.+. |++++++..++ .
T Consensus 153 l~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 153 LIILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred eEEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3445555 689999999999999999999987 66 4556553 3557899998876 89999999998 4
Q ss_pred hc
Q 004726 524 SF 525 (733)
Q Consensus 524 ~~ 525 (733)
+.
T Consensus 229 ~~ 230 (310)
T 3doj_A 229 GA 230 (310)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 101
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.64 E-value=1.4e-16 Score=167.37 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=127.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
+||+|||+|.||.+||.+|+++||+|++||+++++.+.. .+.| ....+++ +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 489999999999999999999999999999999886653 2222 2334444 77899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh---cccCCCCcEEEEecCCCCCCC--------Cee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG---EKTSSQDRIIGAHFFSPAHVM--------PLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~---~~~~~~~~~ig~h~~~p~~~~--------~lv 456 (733)
||+||.|+|.+..+...+...+...++++.++++ +||..+.... +.+... |.+|.+.|..+ .+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid-~sT~~p~~~~~~~~~~~~~----g~~~ldapVsGg~~~a~~g~l~ 136 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVS-MSTISPETSRQLAQVHEWY----GAHYVGAPIFARPEAVRAKVGN 136 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTCCE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEE-CCCCChHHHHHHHHHHHhc----CCceecCCcCCCccccccccce
Confidence 9999999998777777666778888889888764 4555555332 222211 34554434222 222
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----chhhhh----HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf-----i~nRl~----~~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
-++.+ +++++++++++++.+|+.++++++.+|- ++|.++ ...+.|++.+.+. |++++++-.++ .+.
T Consensus 137 im~gG---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~ 213 (297)
T 4gbj_A 137 ICLSG---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTL 213 (297)
T ss_dssp EEEEE---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTT
T ss_pred eeccc---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 23333 7899999999999999999999876762 334443 3445799998866 99999998888 444
No 102
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=3.1e-16 Score=166.18 Aligned_cols=188 Identities=13% Similarity=0.068 Sum_probs=125.5
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCC--hHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
+.++||+|||+|.||.+||..|+++|+ +|++||++ +++.+... +. .+..+++.
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~-------------g~~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------EL-------------GVSCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HT-------------TCEECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HC-------------CCEEeCCH
Confidence 346799999999999999999999999 99999997 45544321 11 23344454
Q ss_pred -cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-C--CCcEEEEecCCCC--CCCC
Q 004726 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-S--QDRIIGAHFFSPA--HVMP 454 (733)
Q Consensus 383 -~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~--~~~~ig~h~~~p~--~~~~ 454 (733)
+.+++||+||+|||++... +++.++.+.++++++|++.+|..+.. .+.+.+. . ..+|+....+.|+ ....
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 6688999999999977665 46788989999999887665544433 2222221 1 2234332112211 1225
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----chhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004726 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (733)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf-----i~nRl~~----~~~~Ea~~l~~~-Gv~~~dID~a~-~ 523 (733)
+..++.++.+ +.++++++.+|+.++++++.+|. ++|..+. ..++|++.+.+. |++++-++ ++ .
T Consensus 156 l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~-~l~~ 229 (312)
T 3qsg_A 156 VPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLA-SLDA 229 (312)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHHH
T ss_pred EEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHh
Confidence 6667777532 88999999999999999876663 3344433 567899988876 89885444 55 4
Q ss_pred hc
Q 004726 524 SF 525 (733)
Q Consensus 524 ~~ 525 (733)
+.
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 43
No 103
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.63 E-value=6e-16 Score=162.79 Aligned_cols=184 Identities=18% Similarity=0.169 Sum_probs=130.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~- 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------A-------------GATLADSVADVAA- 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------T-------------TCEECSSHHHHTT-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCEEcCCHHHHHh-
Confidence 48999999999999999999999999999999998776422 1 24445566 5567
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCC---CCCCeeEEecC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVRT 461 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~---~~~~lveiv~~ 461 (733)
||+||+|||++..++ .+++++.+.++++++|++.+++.+.. .+.+.+. ....|+....+.++ ....+..++.+
T Consensus 71 aDvvi~~vp~~~~~~-~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg 149 (296)
T 3qha_A 71 ADLIHITVLDDAQVR-EVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGA 149 (296)
T ss_dssp SSEEEECCSSHHHHH-HHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEEC
T ss_pred CCEEEEECCChHHHH-HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecC
Confidence 999999999765554 45588888888999887544433322 2333332 22234332111111 12234445555
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHH------HHHH
Q 004726 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRI------DSAI 522 (733)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dI------D~a~ 522 (733)
+++++++++++++.+|++++++++ +| ++.|.+. ...++|++.+.+. |++++++ ..++
T Consensus 150 ---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 150 ---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 689999999999999999999987 56 4556553 3457899998876 8999999 7777
No 104
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.63 E-value=2.6e-15 Score=158.52 Aligned_cols=189 Identities=14% Similarity=0.130 Sum_probs=132.7
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| ....++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 358999999999999999999999999999999998776422 12 12213444 6789
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCHH---HHhcccC-CCCcEEEEecCCCC----CCCCee
Q 004726 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN---IVGEKTS-SQDRIIGAHFFSPA----HVMPLL 456 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~-~~~~~ig~h~~~p~----~~~~lv 456 (733)
+||+||+|||++..++..++ +++.+.++++++|++. |+..+. .+.+.+. ....|+. ||.... ....++
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~ 141 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVS-STISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMT 141 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEEC-SCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEec-CCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeE
Confidence 99999999997666655444 5677888899888654 444443 2333332 2234444 442211 112334
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 524 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~-~~ 524 (733)
.++.+ ++++++.++++++.+|+.++++++.+| ++.|.+. .+.++|++.+.+. |++++++..++ .+
T Consensus 142 ~~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 217 (303)
T 3g0o_A 142 VMASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHA 217 (303)
T ss_dssp EEEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTS
T ss_pred EEeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 44444 689999999999999999999987566 2334432 3457899988866 89999999998 43
No 105
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.63 E-value=1.6e-16 Score=165.50 Aligned_cols=97 Identities=24% Similarity=0.300 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHH
Q 004726 622 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 700 (733)
Q Consensus 622 ~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~-~~~p~~~l 700 (733)
+++||++.++++||+.++++|+ ++++||.++..|+|+|++..|||+++|.+|+|.++++++.+++.+++ +|.|+++|
T Consensus 174 fi~Nrll~~~~~EA~~l~~~Gv--~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~l 251 (293)
T 1zej_A 174 SLVNRFNAAVLSEASRMIEEGV--RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFKPPEWL 251 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTC--CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 8999999999999999999999 69999999999999998788999999999999999999999999887 89999999
Q ss_pred HHHHHCCCCc--cccceeecCC
Q 004726 701 EERATKGIPL--VRIIFHRFSN 720 (733)
Q Consensus 701 ~~~~~~g~~g--~g~gfy~y~~ 720 (733)
++|+++|++| +|+|||+|++
T Consensus 252 ~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 252 QEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHCCCCccccCCEeeecCc
Confidence 9999999999 8999999975
No 106
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.62 E-value=6e-16 Score=162.13 Aligned_cols=187 Identities=15% Similarity=0.105 Sum_probs=132.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------L-------------GAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHhc
Confidence 47999999999999999999999999999999998776422 1 23445555 56789
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCHHH---HhcccC-CCCcEEEEecCCCCC----CCCeeE
Q 004726 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLNI---VGEKTS-SQDRIIGAHFFSPAH----VMPLLE 457 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~-~~~~~ig~h~~~p~~----~~~lve 457 (733)
||+||+|+|++..++..++ +++.+.++++++|++. |+..+.. +.+.+. ....|+. ||..... ...++.
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 135 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLII 135 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEE
Confidence 9999999997666665554 6788889899888654 4544443 222222 2234444 4322111 123344
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
++.+ ++++++.++++++.+|++++++++ +| ++.|-+. ...++|++.+.+. |++++++..++ .+.
T Consensus 136 ~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~ 210 (287)
T 3pef_A 136 LAAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGA 210 (287)
T ss_dssp EEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EEeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 5544 689999999999999999999976 55 2334332 3467899998866 89999999998 443
No 107
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.62 E-value=1.8e-16 Score=166.13 Aligned_cols=189 Identities=14% Similarity=0.111 Sum_probs=130.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------L-------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------H-------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHH
Confidence 358999999999999999999999999999999998776432 1 23344555 5678
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCHHH---HhcccC-CCCcEEEEecCCCCC---CCCeeE
Q 004726 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLNI---VGEKTS-SQDRIIGAHFFSPAH---VMPLLE 457 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~-~~~~~ig~h~~~p~~---~~~lve 457 (733)
+||+||+|+|++..++..++ +++.+.++++++|++. |+..+.. +.+.+. ...+|+....+.++. ...+..
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~-st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~ 135 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDM-STVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLII 135 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEEC-CCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEE
Confidence 99999999997666655544 5677788888887654 4444432 222222 222333321111110 112233
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
++.+ +++++++++++++.+|++++++++ +| ++.|.+. ...++|++.+.+. |++++++..++ .+.
T Consensus 136 ~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 210 (287)
T 3pdu_A 136 LAAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGA 210 (287)
T ss_dssp EEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EEeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 3333 689999999999999999999987 55 3345443 3457899988866 89999999998 543
No 108
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.61 E-value=9.4e-16 Score=159.67 Aligned_cols=210 Identities=10% Similarity=-0.033 Sum_probs=137.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
.||+|||+|.||.+||..|+++ ++| .+||++++++++..+. .+. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~----------------------~g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEV----------------------YGG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHH----------------------TCC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHH----------------------cCC--ccCCHHHHHh
Confidence 4799999999999999999988 999 5999999887664221 112 33444 4578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEec----CCCCCC-CCeeEEecC
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAHV-MPLLEIVRT 461 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~----~~p~~~-~~lveiv~~ 461 (733)
+||+||+|+|++. ..+++.++. +++++|++.+++.+.+.+... .+.+.|+ .+++.. ....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999654 556666654 577888765556676655433 4566774 332221 112222222
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--C------CcchhhhhHHHHHHHHHHHH-cCCCHH----------HHHHHH
Q 004726 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--T------GFAVNRAFFPYSQSARLLVS-LGVDVF----------RIDSAI 522 (733)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--p------Gfi~nRl~~~~~~Ea~~l~~-~Gv~~~----------dID~a~ 522 (733)
-.++++.++.++++++.+|+.++++++. + ++..| ++..++.++..++. .|++.+ .++.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 2235667999999999999999988742 1 34444 55567788877777 588544 566666
Q ss_pred -Hh-cCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004726 523 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (733)
Q Consensus 523 -~~-~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (733)
.+ .+.++||++..|..+++...+.++.+.+++
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 33 556789999999999999999998875544
No 109
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.60 E-value=2.3e-15 Score=160.15 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=129.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~e~~~ 86 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------L-------------GATIHEQARAAAR 86 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------T-------------TCEEESSHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCEeeCCHHHHHh
Confidence 468999999999999999999999999999999998776421 1 23445555 6688
Q ss_pred CCCEEEEeccCChHHHHHHHH-HHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCC---CCCCeeEEe
Q 004726 387 DVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIV 459 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~-~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~---~~~~lveiv 459 (733)
+||+||+|||++..++..+.. ++.+.++++++|++.+++.+.. .+.+.+. ....|+....+.++ ..+.+..++
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMA 166 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEe
Confidence 999999999976665544432 5667788888876544433322 2223222 22233332111111 112344455
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
.+ ++++++.++++++.+ +.++++++ +| ++.|-+. .+.++|++.+.+. |++++++..++ .+.
T Consensus 167 gg---~~~~~~~~~~ll~~~-~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 238 (320)
T 4dll_A 167 GG---KPADFERSLPLLKVF-GRATHVGP-HGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGF 238 (320)
T ss_dssp ES---CHHHHHHHHHHHHHH-EEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTST
T ss_pred CC---CHHHHHHHHHHHHhc-CCEEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccc
Confidence 54 689999999999999 88999976 45 3334433 3457899998876 89999999998 444
No 110
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.57 E-value=2.9e-15 Score=149.57 Aligned_cols=158 Identities=9% Similarity=0.017 Sum_probs=123.5
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
.+||+|||+|.||+++|..|.++|++|++||+. +.+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~~ 43 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIRD 43 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhcc
Confidence 358999999999999999999999999999982 12467
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeEEecCCCCCHH
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lveiv~~~~t~~e 467 (733)
|| |.|||.+ ....+++++.+.++++++|++.+++.+...+........+|++.||.... ..++... +++
T Consensus 44 aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a~--d~~ 112 (232)
T 3dfu_A 44 FE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASAL--DEL 112 (232)
T ss_dssp CS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEES--SHH
T ss_pred CC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeCC--CHH
Confidence 88 9999965 55678889988899999988766555555454444556789999987432 1233322 788
Q ss_pred HHHHHHHHHHHcCCeeEEEc--CCCCc----chhhhhHHHHHHHHHHH---HcCC-CHHHH
Q 004726 468 VILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFRI 518 (733)
Q Consensus 468 ~~~~~~~l~~~lG~~~v~v~--d~pGf----i~nRl~~~~~~Ea~~l~---~~Gv-~~~dI 518 (733)
.++.++++++.+|.+++.+. +.++| ..++.+.++.++|..++ ++|+ +++|+
T Consensus 113 a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~ 173 (232)
T 3dfu_A 113 GETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDI 173 (232)
T ss_dssp HHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Confidence 99999999999999999995 45566 44667788899999999 8897 88883
No 111
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.57 E-value=5.2e-16 Score=162.20 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCH
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 698 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~~~p~~ 698 (733)
.+++++||++.++++||++++++|++ +|++||.++..|+|+|+ |||+++|.+|+|+.++++++ ....+++.|++
T Consensus 188 ~~g~i~nr~~~~~~~ea~~l~~~g~~-~~~~id~~~~~~~g~~~---Gp~~~~D~~Gld~~~~~~~~--~~~~~~~~~~~ 261 (283)
T 4e12_A 188 KAGYVLNSLLVPLLDAAAELLVDGIA-DPETIDKTWRIGTGAPK---GPFEIFDIVGLTTAYNISSV--SGPKQREFAAY 261 (283)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHT--SCHHHHHHHHH
T ss_pred CCCEEehHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhccCCCc---CHHHHHHhccHHHHHHHHhc--cccCcccCchH
Confidence 46789999999999999999999998 89999999999999999 99999999999999998873 11112467888
Q ss_pred HHHHHHHCCCCc--cccceeec
Q 004726 699 FLEERATKGIPL--VRIIFHRF 718 (733)
Q Consensus 699 ~l~~~~~~g~~g--~g~gfy~y 718 (733)
++++|+++|++| +|+|||+|
T Consensus 262 ~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 262 LKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHHCCCCceeCCeEeecC
Confidence 999999999999 89999999
No 112
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.56 E-value=3e-14 Score=149.10 Aligned_cols=188 Identities=13% Similarity=0.016 Sum_probs=133.1
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
|+||+|||+ |.||.++|..|+++|++|++||+++++++...+ .| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHhc
Confidence 468999999 999999999999999999999999988765421 12 22233336788
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCC--------CCCe---
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 455 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~--------~~~l--- 455 (733)
+||+||+|+| .....++++++.+.++++++|++.+++.++..+.+ .....++++.||+.|.. ....
T Consensus 67 ~aDvVi~av~--~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALP--DNIIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSC--HHHHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCC--chHHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 9999999999 45578888999888999999988666666665554 33345799999988765 2222
Q ss_pred -----eEEecCCCCCHHHHHHHHHHHHHcCC---eeEEEcCC-CC----cchhhhhHHH---HHHHHHH-HHc-CCCHHH
Q 004726 456 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGNC-TG----FAVNRAFFPY---SQSARLL-VSL-GVDVFR 517 (733)
Q Consensus 456 -----veiv~~~~t~~e~~~~~~~l~~~lG~---~~v~v~d~-pG----fi~nRl~~~~---~~Ea~~l-~~~-Gv~~~d 517 (733)
..++.+..++++.++.+.++++.+|. +++++++. .+ .+.|-...++ +.|++.. ... |+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 23333334688999999999999999 78888531 11 2234333332 2344433 333 888887
Q ss_pred HHHHH
Q 004726 518 IDSAI 522 (733)
Q Consensus 518 ID~a~ 522 (733)
+-.++
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 113
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.55 E-value=4.7e-14 Score=150.07 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=134.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC----CeeEEEeCChH--HHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G----~~V~~~d~~~e--~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (733)
++||+|||+|.||.+||..|+++| ++|++||++++ +++... +.| +..+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~-----------~~G-------------~~~~~~ 77 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-----------KMG-------------VKLTPH 77 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH-----------HHT-------------CEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH-----------HcC-------------CEEeCC
Confidence 347999999999999999999999 89999999986 555431 112 333434
Q ss_pred c-cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCC---CCcEEEEecCCCCCCCCeeE
Q 004726 382 Y-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLLE 457 (733)
Q Consensus 382 ~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~---~~~~ig~h~~~p~~~~~lve 457 (733)
. +.+++||+||+||| +....+++.++.+.++++++|++.++++++..+.+.+.. ..++++.|+..|........
T Consensus 78 ~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~ 155 (322)
T 2izz_A 78 NKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGAT 155 (322)
T ss_dssp HHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEE
T ss_pred hHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeE
Confidence 4 56788999999999 667778888998888889999888888888776665532 45799999988887665555
Q ss_pred Ee-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-------CCcchhhhhHHHHHHHHH--HHHcCCCHHHHHHHH
Q 004726 458 IV-RTERTSAQVILDLMTVGKIIKKVPVVVGNC-------TGFAVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (733)
Q Consensus 458 iv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~-------pGfi~nRl~~~~~~Ea~~--l~~~Gv~~~dID~a~ 522 (733)
++ .++.++++.++.+.++++.+|..+++..+. .| ..+.+++.+ .|++. ....|+++++.-.++
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g-~gpa~~~~~-~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSG-SGPAYAFTA-LDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTT-THHHHHHHH-HHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhc-CHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHH
Confidence 54 577778999999999999999765543221 11 112222222 33333 345588887766555
No 114
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.54 E-value=1.3e-14 Score=162.02 Aligned_cols=204 Identities=13% Similarity=0.088 Sum_probs=142.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHH--HhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||.++|..|+++|++|++||+++++++...+.... ..+.| + .+...+ ..+++.+++++ +++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~----i~e~g-l-~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVP----IHEPG-L-KEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCS----SCCTT-H-HHHHHHHHHTTCEEEECCHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCC----cCCCC-H-HHHHHHhcccCCEEEECCHHHHh
Confidence 489999999999999999999999999999999988775321000 00000 0 000010 12467888888 578
Q ss_pred CCCCEEEEeccC--------ChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccC----CC---CcEEEEecC
Q 004726 386 KDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS----SQ---DRIIGAHFF 447 (733)
Q Consensus 386 ~~aDlVI~avpe--------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~----~~---~~~ig~h~~ 447 (733)
++||+||+|||. |+....++++++.+.++++++|+ +.||+++.. +.+.+. .+ ..+ .+.+
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV-~~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v~~ 159 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIV-DKSTVPVGTAERVRAAVAEELAKRGGDQMF--SVVS 159 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEE-ECSCCCTTHHHHHHHHHHHHHHHTTCCCCE--EEEE
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEE-EeCCcCCCchHHHHHHHHHHhcCCCCCccE--EEEE
Confidence 999999999997 44888899999999999999885 456765532 221111 11 222 2355
Q ss_pred CCCCCCCee---------EEecCCCCCH----HHHHHHHHHHHHcCC--eeEEEcC-----CCCcchhhhh---HHHHHH
Q 004726 448 SPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYSQS 504 (733)
Q Consensus 448 ~p~~~~~lv---------eiv~~~~t~~----e~~~~~~~l~~~lG~--~~v~v~d-----~pGfi~nRl~---~~~~~E 504 (733)
+|....+.. .++.|.. ++ +..+.+.++++.+++ .++++.+ ..+++.|.+. .+++||
T Consensus 160 ~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE 238 (478)
T 2y0c_A 160 NPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNE 238 (478)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555543 3555543 34 789999999998875 5777654 4467778765 578899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 004726 505 ARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 505 a~~l~~~-Gv~~~dID~a~ 522 (733)
+..+.+. |++++++..++
T Consensus 239 ~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 239 LANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 9998877 89999999887
No 115
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.53 E-value=1.4e-14 Score=159.23 Aligned_cols=91 Identities=15% Similarity=0.124 Sum_probs=82.3
Q ss_pred chHHHHHHHHHHHHHHHHHHh-hcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Q 004726 619 TEKEIVEMILFPVVNESCRVL-EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 697 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l-~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~~~p~ 697 (733)
+++||+||++.++++||+.++ ++| + ++++||.++. ++|||+ |||+++|.+|+|+.+++.+.+ .+.|+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~G-a-~~e~ID~a~~-~~G~pm---GPf~l~D~vGlD~~~~i~~~~------~~~~~ 299 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYG-Y-LPHQIDKIIT-NFGFLM---GPMTVADMNGFDVMEKLKKEN------GLEPN 299 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSC-C-CHHHHHHHHH-HHTBSS---CHHHHHHHHCTHHHHHHHHHS------CCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcC-C-CHHHHHHHHH-HcCCCc---CHHHHHHHhchHHHHHHHHHh------ccCch
Confidence 579999999999999999999 778 5 7999999987 999999 999999999999999988755 24567
Q ss_pred HHHHHHHHCCCCc--cccceeecCCC
Q 004726 698 RFLEERATKGIPL--VRIIFHRFSNI 721 (733)
Q Consensus 698 ~~l~~~~~~g~~g--~g~gfy~y~~~ 721 (733)
+++++|+++|++| +|+|||+|++.
T Consensus 300 ~~l~~~v~~G~lG~KtG~GFY~y~~~ 325 (460)
T 3k6j_A 300 PIEKEMWRLKRYGRKTNKGFYKYDDK 325 (460)
T ss_dssp HHHHHHHHTTCCBGGGTBSSSEECTT
T ss_pred HHHHHHHHCCCCeeecCCEEEECCCC
Confidence 9999999999999 89999999853
No 116
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=2.4e-14 Score=152.39 Aligned_cols=152 Identities=14% Similarity=0.174 Sum_probs=115.0
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc-
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF- 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l- 385 (733)
++||+|||+|.||++||..|.++|++|++||++++.++.+.+ .| +..++++ +.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~~ 63 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATLQ 63 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHHH
Confidence 568999999999999999999999999999999998776421 22 1223333 333
Q ss_pred ---CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEEecCCCCCC--------
Q 004726 386 ---KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV-------- 452 (733)
Q Consensus 386 ---~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~~~ig~h~~~p~~~-------- 452 (733)
++||+||+||| +.....+++++.+. +++++|++.+|+.. +..+.+... ..+|++.||+..+..
T Consensus 64 ~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~~ 139 (341)
T 3ktd_A 64 RAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASMD 139 (341)
T ss_dssp HHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCCS
T ss_pred hcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhhh
Confidence 35799999999 67788899999887 78888876555432 234444332 468999999876541
Q ss_pred ----CCeeEEecCCCCCHH--------HHHHHHHHHHHcCCeeEEEc
Q 004726 453 ----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG 487 (733)
Q Consensus 453 ----~~lveiv~~~~t~~e--------~~~~~~~l~~~lG~~~v~v~ 487 (733)
+..+.+++++.++++ .++.+.++++.+|.+++.+.
T Consensus 140 ~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 140 GLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSR 186 (341)
T ss_dssp STTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeC
Confidence 224667788878888 99999999999999999885
No 117
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.51 E-value=3.5e-14 Score=150.00 Aligned_cols=186 Identities=11% Similarity=0.041 Sum_probs=127.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++||+|||+|.||.+||..|+++|++|++||+++++++...+ .| +...+++ +.++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~e~~~ 64 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AG-------------AHLCESVKAALS 64 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HT-------------CEECSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHh
Confidence 468999999999999999999999999999999998776422 12 2334444 5678
Q ss_pred CCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCC-CCC--CCeeEE
Q 004726 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP-AHV--MPLLEI 458 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p-~~~--~~lvei 458 (733)
+||+||+|+|++..++..+ . .+... .++++|++.+++.+.. .+.+.+. ...+|+....+.+ +.. ..++.+
T Consensus 65 ~aDvVi~~vp~~~~~~~v~-~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~ 142 (306)
T 3l6d_A 65 ASPATIFVLLDNHATHEVL-GMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSI 142 (306)
T ss_dssp HSSEEEECCSSHHHHHHHH-TSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEE
T ss_pred cCCEEEEEeCCHHHHHHHh-cccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEE
Confidence 9999999999766555444 4 45544 5777776544333322 3333332 3345665433221 111 123334
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEE--cC--CCCcchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 459 VRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v--~d--~pGfi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
+.+ +++++++++++++.+|++++++ ++ ..|..++-++ ...++|++.+.+. |++++++..++
T Consensus 143 ~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~ 211 (306)
T 3l6d_A 143 HTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLL 211 (306)
T ss_dssp EEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 444 6999999999999998899999 75 4556776332 3456799988866 89999999888
No 118
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.51 E-value=2.3e-13 Score=144.25 Aligned_cols=192 Identities=12% Similarity=0.070 Sum_probs=126.8
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC-CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccc-cCcccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l 385 (733)
++||+|||+|.||.++|..|+++| ++|++||++++..+++.+.. +...+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~----~~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALR----ARAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHH----HHHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHH----HHHHHCC-------------C-CCCCHHHHH
Confidence 358999999999999999999999 99999999984222111111 1111222 2 23 334778
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH---HHhcccC-CCCcEEEEecCCCC--CCCCeeEEe
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS-SQDRIIGAHFFSPA--HVMPLLEIV 459 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~-~~~~~ig~h~~~p~--~~~~lveiv 459 (733)
++||+||+|||++... +.+.++.+.++++++|++.+ +..+. .+.+.+. ...+|+......|. ....+..++
T Consensus 86 ~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~v 162 (317)
T 4ezb_A 86 ACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILV 162 (317)
T ss_dssp GGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEE
T ss_pred hcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEE
Confidence 9999999999966655 34578888899999887655 44433 2333332 22345543223322 233455566
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc------chhhh---hHHHHHHHHHHHHc-CCCHHHHHHHHHhc
Q 004726 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF------AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAIRSF 525 (733)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf------i~nRl---~~~~~~Ea~~l~~~-Gv~~~dID~a~~~~ 525 (733)
.++. + +.++++++.+|+.++++++.+|- +.|-+ ..+.++|++.+.+. |++++.++.+..+.
T Consensus 163 gg~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 163 AGRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp ESTT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred eCCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 6643 2 78999999999999999986662 33422 35667899998876 89997666555443
No 119
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.51 E-value=5.3e-14 Score=155.86 Aligned_cols=206 Identities=17% Similarity=0.121 Sum_probs=137.2
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHC-CC-eeEEEeCChH----HHHHHHHHH------HHHHHHhHhcCCCCHHHHHHHhh
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 374 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~e----~~~~~~~~i------~~~l~~~~~~g~~~~~~~~~~~~ 374 (733)
+++||+|||+|.||.++|.+|+++ |+ +|++||++++ +++...+.. +..++.++++ ....+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 456899999999999999999999 99 9999999999 776642210 0001111100 00135
Q ss_pred ccccccCccccCCCCEEEEeccCCh----------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcc--------cC
Q 004726 375 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK--------TS 436 (733)
Q Consensus 375 ~i~~~~~~~~l~~aDlVI~avpe~~----------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~--------~~ 436 (733)
++.++++.+++++||+||+|||++. .......+.+.+.++++++|+ +.||+++...... ..
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHHHHhcC
Confidence 7888888888999999999998753 345566678999999999875 4566665422211 11
Q ss_pred C--CCcEEEEecCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCC-----Ccchhhhh-
Q 004726 437 S--QDRIIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCT-----GFAVNRAF- 498 (733)
Q Consensus 437 ~--~~~~ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d~p-----Gfi~nRl~- 498 (733)
. ...|.-+ ++|....+.- .|+.|. +++..+.+.++++.+ ++.++++++.. .++.|-++
T Consensus 168 ~~~~~d~~v~--~~Pe~~~~G~a~~~~~~~~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 168 LKAGEDFALA--HAPERVMVGRLLKNIREHDRIVGGI--DEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp CCBTTTBEEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE--eCCccCCccchhhhhcCCcEEEEeC--CHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHH
Confidence 1 1112111 2443332211 245443 788889999999999 88888886522 23334332
Q ss_pred --HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004726 499 --FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (733)
Q Consensus 499 --~~~~~Ea~~l~~~-Gv~~~dID~a~-~~~ 525 (733)
.+++||+..+.+. |+++.++-.++ ...
T Consensus 244 ~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 244 LQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 4678999988876 99999998888 444
No 120
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.50 E-value=1.4e-13 Score=144.22 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=119.2
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
|+++||+|||+|.||.++|..|+++ |++|++||+++++++.+. +.|..+ ..++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~~-----------~~~~~~~ 61 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-----------ERGIVD-----------EATADFK 61 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-----------HcCCcc-----------cccCCHH
Confidence 3457899999999999999999988 689999999998876542 122110 233444
Q ss_pred cccCCCCEEEEeccCChHHHHHHHHHHHHh-CCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEEecC------CCCC-
Q 004726 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH- 451 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~~k~~v~~~l~~~-~~~~~ii~s~tS~~~--~~~l~~~~~~-~~~~ig~h~~------~p~~- 451 (733)
+.+++||+||+||| ......++.++.+. ++++++|++.+++.. ...+.+.+.. ..++++.||+ .|..
T Consensus 62 ~~~~~aDvVilavp--~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a 139 (290)
T 3b1f_A 62 VFAALADVIILAVP--IKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA 139 (290)
T ss_dssp TTGGGCSEEEECSC--HHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC
T ss_pred HhhcCCCEEEEcCC--HHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh
Confidence 56789999999999 55568888899888 888988875444322 2455555544 5689999997 4443
Q ss_pred -----CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 452 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 452 -----~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
.+..+.++++..++++.++.+.++++.+|..++++.+
T Consensus 140 ~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 140 NVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp CTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred hHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3355778888778999999999999999998888753
No 121
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.49 E-value=3.1e-13 Score=139.42 Aligned_cols=148 Identities=12% Similarity=0.093 Sum_probs=114.9
Q ss_pred eEEEEcCCcCcHHHHHHHHHCC-CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
||+|||+|.||.++|..|+++| ++|++||+++++++...+. .| +..+++. +.+ +
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~-~ 57 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH-S 57 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-T
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-c
Confidence 7999999999999999999999 9999999999887764221 01 3334444 667 9
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCC-eeEEecCCCCCH
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTSA 466 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~-lveiv~~~~t~~ 466 (733)
||+||+|+| ......++.++.+ + +++|++.++++++..+.+.+....+++..++..|..... ...++++..+++
T Consensus 58 ~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~ 132 (263)
T 1yqg_A 58 DDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSE 132 (263)
T ss_dssp TSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCH
T ss_pred CCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCH
Confidence 999999999 6666677766544 4 888888888998888877776555788886655555543 455677777899
Q ss_pred HHHHHHHHHHHHcCCeeEEEc
Q 004726 467 QVILDLMTVGKIIKKVPVVVG 487 (733)
Q Consensus 467 e~~~~~~~l~~~lG~~~v~v~ 487 (733)
+.++.+.++++.+|..+ +++
T Consensus 133 ~~~~~~~~l~~~~g~~~-~~~ 152 (263)
T 1yqg_A 133 TDRRIADRIMKSVGLTV-WLD 152 (263)
T ss_dssp HHHHHHHHHHHTTEEEE-ECS
T ss_pred HHHHHHHHHHHhCCCEE-EeC
Confidence 99999999999999876 666
No 122
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.49 E-value=3.2e-14 Score=151.12 Aligned_cols=187 Identities=16% Similarity=0.149 Sum_probs=132.7
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++||+|||+|.||..+|..|++.|++|++||+++++++...+ .| +...++. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 85 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVVS 85 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHHh
Confidence 468999999999999999999999999999999987665321 12 2223344 5578
Q ss_pred CCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCC--HHHHhcccC-CCCcEEEEecCCCC---CCCCeeEE
Q 004726 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLLEI 458 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~-~~~~~ig~h~~~p~---~~~~lvei 458 (733)
+||+||+|+|++..++..+.. .+.+.+.++++|++.+++.+ ...+.+.+. .+.++++.++++.+ ..+.++.+
T Consensus 86 ~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~ 165 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVIL 165 (316)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEE
T ss_pred cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEE
Confidence 899999999976665544432 13356778887765443332 334555442 45678887665432 23345556
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cchhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG------fi~nRl---~~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
+.+ +++.++.+.++++.+|+.++++++ +| ++.|.+ +..+++|++.+.+. |+++++++.++
T Consensus 166 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~-~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 166 AAG---DRGLYEDCSSCFQAMGKTSFFLGE-VGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eCC---CHHHHHHHHHHHHHhcCCEEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 665 588999999999999999888876 33 455665 35677899988765 89999999888
No 123
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.49 E-value=9.1e-14 Score=138.40 Aligned_cols=140 Identities=16% Similarity=0.186 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEeC
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~ 106 (733)
.++..+.++|.+.|..++.+++++.|+|. ..|.|+++.. ...++ +.|..+++||++.++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~----InSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLY----VNTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEE----EEECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 48899999999999999988778888875 2344444321 22455 568889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCCChhh------------------hhhhccccCH--HHHHHHHH
Q 004726 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGG------------------TQRLPRLVGL--SKAIEMML 164 (733)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P~~g~------------------~~~l~r~~G~--~~a~~l~l 164 (733)
|.|.++|+.|+++||. |+|.++++|++++.. |..|..|. ...+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 44443343 2456677676 47889999
Q ss_pred cCCCCCHHHHHHcCCccEEcCcch
Q 004726 165 LSKSITSEEGWKLGLIDAVVTSEE 188 (733)
Q Consensus 165 tG~~i~a~eA~~~Glv~~vv~~~~ 188 (733)
+|+.++|+||+++||||+|+++++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998765
No 124
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.49 E-value=4.5e-14 Score=151.67 Aligned_cols=174 Identities=11% Similarity=0.045 Sum_probs=118.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EG-------------IAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CEEeCCHHHHHh
Confidence 368999999999999999999999999999999998776421 12 3334444 4566
Q ss_pred CC---CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCC---CCCCeeE
Q 004726 387 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (733)
Q Consensus 387 ~a---DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~---~~~~lve 457 (733)
++ |+||+|||.+ ....++.++.+.++++++|++.+++.+.. .+.+.+. ....|+......++ ..++ .
T Consensus 78 ~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~--~ 153 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY--C 153 (358)
T ss_dssp HSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC--E
T ss_pred cCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC--e
Confidence 67 9999999976 45667788999999999988766655433 3333332 23345544222211 1112 2
Q ss_pred EecCCCCCHHHHHHHHHHHHHcC--------------------CeeEEEcC-CCCcch----hhhh---HHHHHHHHHHH
Q 004726 458 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV----NRAF---FPYSQSARLLV 509 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG--------------------~~~v~v~d-~pGfi~----nRl~---~~~~~Ea~~l~ 509 (733)
++.+. ++++++.++++++.+| +.++++++ ..|..+ |-+. ...++|++.++
T Consensus 154 im~GG--~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 154 LMIGG--EKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEEES--CHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecC--CHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432 7899999999999999 56788876 223333 3222 24457999988
Q ss_pred Hc
Q 004726 510 SL 511 (733)
Q Consensus 510 ~~ 511 (733)
+.
T Consensus 232 ~~ 233 (358)
T 4e21_A 232 HH 233 (358)
T ss_dssp HT
T ss_pred Hh
Confidence 76
No 125
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.48 E-value=7.3e-14 Score=145.40 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=124.8
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHH
Q 004726 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (733)
Q Consensus 15 i~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (733)
|+++..+.. ..|+++..+.+.+.++++.+.++ .+++|+|++.| |+|+.+.... + .....++ ..
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~a 183 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AA 183 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HH
Confidence 344444433 35999999999999999999988 89999999876 8888654210 1 1122333 33
Q ss_pred H---hcCCCcEEEEeCCcccchh-hHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCC
Q 004726 94 I---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169 (733)
Q Consensus 94 i---~~~~kp~Iaav~G~a~GgG-~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i 169 (733)
+ ...++|+|++|+|.|.||| +.++++||++||.++|+|++. +...+++.+|.. ++++..
T Consensus 184 l~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~ 246 (304)
T 2f9y_B 184 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQ 246 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTT
T ss_pred HHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccC
Confidence 4 4459999999999999999 788999999999999999987 355566777743 578899
Q ss_pred CHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccC
Q 004726 170 TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (733)
Q Consensus 170 ~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~ 204 (733)
+|++++++|+||.|++++++.+.+.+++..++..+
T Consensus 247 ~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 247 RSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp BHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999987653
No 126
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.47 E-value=3.2e-14 Score=165.42 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=85.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCC------
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN------ 692 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~------ 692 (733)
+++||+||++.++++||+++++||+ ++++||.++. ++|||+ |||+++|.+|+|+.+++++.+....+.
T Consensus 495 ~pGFi~NRi~~~~~~ea~~l~~eG~--~~~~id~a~~-~~G~pm---GPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~ 568 (742)
T 3zwc_A 495 CYGFVGNRMLAPYYNQGFFLLEEGS--KPEDVDGVLE-EFGFKM---GPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTP 568 (742)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHTTC--CHHHHHHHHH-HHTCSS---CHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCC
T ss_pred CCCccHHHHhhHHHHHHHHHHHcCC--CHHHHHHHHH-HcCCCC---ChHHHHHHhCHHHHHHHHHHHHhhCcccCccch
Confidence 6899999999999999999999995 4999999975 799999 999999999999999999876543321
Q ss_pred -----CCCCCHHHHHHHHCCCCc--cccceeecCCCc
Q 004726 693 -----FFKPSRFLEERATKGIPL--VRIIFHRFSNIF 722 (733)
Q Consensus 693 -----~~~p~~~l~~~~~~g~~g--~g~gfy~y~~~~ 722 (733)
.+.+++++++|+++|++| +|+|||+|++..
T Consensus 569 ~~~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~ 605 (742)
T 3zwc_A 569 VRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPL 605 (742)
T ss_dssp TTEETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTT
T ss_pred hhhcccccccHHHHHHHHCCCccccCCCeeEECCCCC
Confidence 234577999999999999 899999998643
No 127
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.46 E-value=1.4e-13 Score=145.06 Aligned_cols=186 Identities=16% Similarity=0.140 Sum_probs=128.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
+||+|||+|.||..+|..|++.|++|++||+++++++...+ .| +...+++ +.+++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAAA 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988765321 12 2233444 55778
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEEecCCCCC----CCCeeEE
Q 004726 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLEI 458 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~-~~~~ig~h~~~p~~----~~~lvei 458 (733)
+|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ...+.+.+.. ..+++.. +..+.. ...+..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~ 139 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTIM 139 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEE
Confidence 9999999996666555444 267788889998887776653 3455554432 2234432 211110 0112333
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCC----cchhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~pG----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
+.+ +++.++.+.++++.+|..++++++ ..| ++.|.+ +...++|++.+.+. |+++++++.++
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 443 789999999999999999888864 233 234555 34567899888765 89999988887
No 128
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.46 E-value=5.6e-13 Score=137.27 Aligned_cols=183 Identities=11% Similarity=0.093 Sum_probs=128.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
.||+|||+|.||..++..|.+.|++|++||+++++++...+.. | +..++++ +.+++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------g-------------~~~~~~~~~~~~~ 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------A-------------LPYAMSHQDLIDQ 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------T-------------CCBCSSHHHHHHT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------C-------------CEeeCCHHHHHhc
Confidence 4899999999999999999999999999999998876643210 1 2234444 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCC-eeEEecCCCCCH
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTSA 466 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~-lveiv~~~~t~~ 466 (733)
+|+||+|+| .....+++.+ +.+++++++.+++++++.+.+......+++..|+..|..... ...++++..+++
T Consensus 61 ~D~Vi~~v~--~~~~~~v~~~----l~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~~ 134 (259)
T 2ahr_A 61 VDLVILGIK--PQLFETVLKP----LHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQ 134 (259)
T ss_dssp CSEEEECSC--GGGHHHHHTT----SCCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCCH
T ss_pred CCEEEEEeC--cHhHHHHHHH----hccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCCH
Confidence 999999999 4444455543 347778888888888888877776555788888877766554 455667777899
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCC--------CcchhhhhHHHHHHHH-HHHHcCCCHHHHHHHH
Q 004726 467 QVILDLMTVGKIIKKVPVVVGNCT--------GFAVNRAFFPYSQSAR-LLVSLGVDVFRIDSAI 522 (733)
Q Consensus 467 e~~~~~~~l~~~lG~~~v~v~d~p--------Gfi~nRl~~~~~~Ea~-~l~~~Gv~~~dID~a~ 522 (733)
+.++.+.++++.+| .++++++.. | -.|.++..+..... .....|++++++-.++
T Consensus 135 ~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g-~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 135 ELQARVRDLTDSFG-STFDISEKDFDTFTALAG-SSPAYIYLFIEALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHT-THHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CEEEecHHHccHHHHHhc-cHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999 577776521 1 01222233332211 2445577777666655
No 129
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.45 E-value=4.4e-14 Score=165.13 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC-
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS- 697 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~~~p~- 697 (733)
++++++||++.++++|++.++++|+ ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++|.|+
T Consensus 495 ~~Gfi~Nril~~~~~Ea~~l~~~G~--~~~~id~~~-~~~G~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~~ 568 (715)
T 1wdk_A 495 CPGFLVNRVLFPYFGGFAKLVSAGV--DFVRIDKVM-EKFGWPM---GPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDR 568 (715)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTC--CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHCHHHHCCSS
T ss_pred CCChhhhHHHHHHHHHHHHHHHCCC--CHHHHHHHH-HHcCCCC---CHHHHHHHhhHHHHHHHHHHHHHhcCCccCCCh
Confidence 3789999999999999999999994 699999998 8999999 99999999999999999999988887788988
Q ss_pred -HHHHHHHHCCCCc--cccceeecC
Q 004726 698 -RFLEERATKGIPL--VRIIFHRFS 719 (733)
Q Consensus 698 -~~l~~~~~~g~~g--~g~gfy~y~ 719 (733)
+++++|+++|++| +|+|||+|+
T Consensus 569 ~~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 569 RSAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp CCHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHHHHhCchhhhcCCcEEEecc
Confidence 8999999999999 899999996
No 130
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.45 E-value=1.1e-12 Score=136.61 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=115.4
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
|+||+|||+|.||.++|..|++.|+ +|++||+++++++.+. +.|.. ...++++ +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 3689999999999999999999999 9999999998876542 12211 0123444 66
Q ss_pred cC-CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEEecCCCCC----------
Q 004726 385 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 451 (733)
Q Consensus 385 l~-~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~~~ig~h~~~p~~---------- 451 (733)
++ +||+||+|+| ......++.++.+.++++++|++.+++.. ...+.+.+.. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp--~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSC--HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999 55666888888888989988765444332 2334444432 488889865432
Q ss_pred --CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 452 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 452 --~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
.+..+.++++..++++..+.+.++++.+|..++++++
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3445777787778999999999999999999888764
No 131
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.44 E-value=7.5e-14 Score=163.27 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=77.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCC
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPS 697 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~~~~~~~~~-~~p~ 697 (733)
++++++||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++ |.|
T Consensus 493 ~~Gfi~Nril~~~~~Ea~~l~~~G-~-~~e~id~~~-~~~g~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~- 565 (725)
T 2wtb_A 493 CTGFAVNRMFFPYTQAAMFLVECG-A-DPYLIDRAI-SKFGMPM---GPFRLCDLVGFGVAIATATQFIENFSERTYKS- 565 (725)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHSGGGCCCC-
T ss_pred CccHHHHHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhchHHHHHHHHHHHHhcCCccCCh-
Confidence 378999999999999999999999 4 699999999 8999999 9999999999999999999999888877 988
Q ss_pred HHHHHHHHCCCCc--cccceeecC
Q 004726 698 RFLEERATKGIPL--VRIIFHRFS 719 (733)
Q Consensus 698 ~~l~~~~~~g~~g--~g~gfy~y~ 719 (733)
+++++|+++|++| +|+|||+|+
T Consensus 566 ~~l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 566 MIIPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp THHHHHHTTC--------------
T ss_pred HHHHHHHHCCCceecCCceeEeCC
Confidence 9999999999999 899999995
No 132
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.44 E-value=1.3e-12 Score=135.95 Aligned_cols=154 Identities=17% Similarity=0.177 Sum_probs=115.1
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aD 389 (733)
||+|||+|.||.++|..|++.|++|++||+++++++.+. +.|.. ...+++++.+++||
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~~~~D 59 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLV-----------DEAGQDLSLLQTAK 59 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGGTTCS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------hCCCC-----------ccccCCHHHhCCCC
Confidence 799999999999999999999999999999998876542 11211 01234443338999
Q ss_pred EEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCC------------CCCeeE
Q 004726 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLLE 457 (733)
Q Consensus 390 lVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~------------~~~lve 457 (733)
+||+|+| ......+++++.+.++++++|++. ++.....+........++++.||..... ....+.
T Consensus 60 ~vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~ 136 (279)
T 2f1k_A 60 IIFLCTP--IQLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYV 136 (279)
T ss_dssp EEEECSC--HHHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEE
T ss_pred EEEEECC--HHHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEE
Confidence 9999999 667788889998889889988764 5555443333222223899999875321 223567
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
++++..++++..+.+.++++.+|..++++++
T Consensus 137 ~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 137 LTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 7777778999999999999999998888864
No 133
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.44 E-value=6.6e-13 Score=146.27 Aligned_cols=199 Identities=15% Similarity=0.111 Sum_probs=133.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHH------HhhccccccCc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN------ALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~------~~~~i~~~~~~ 382 (733)
-+|+|||+|.||.++|.+|+++|++|++||+++++++...+.. ..+-....++ ..+++.+++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~----------~~~~epgl~~~~~~~~~~g~l~~ttd~ 78 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNV----------MPIYEPGLDALVASNVKAGRLSFTTDL 78 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCC----------CCccCCCHHHHHHhhcccCCEEEECCH
Confidence 3799999999999999999999999999999999887753210 0000000111 12567888888
Q ss_pred -cccCCCCEEEEeccCChH---------HHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh---cccC----CCCcEEEEe
Q 004726 383 -SEFKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLNIVG---EKTS----SQDRIIGAH 445 (733)
Q Consensus 383 -~~l~~aDlVI~avpe~~~---------~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~---~~~~----~~~~~ig~h 445 (733)
+++++||+||.|||.+.+ ...++++.+.+.++++++|++ .||+++.... +.+. ...-.+..
T Consensus 79 ~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~-~STv~pgtt~~l~~~l~e~~~~~d~~v~~- 156 (446)
T 4a7p_A 79 AEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVT-KSTVPVGTGDEVERIIAEVAPNSGAKVVS- 156 (446)
T ss_dssp HHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEE-CSCCCTTHHHHHHHHHHHHSTTSCCEEEE-
T ss_pred HHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCCCchHHHHHHHHHHHhCCCCCceEEe-
Confidence 688999999999987653 567778899999999998875 4566654322 2111 11112222
Q ss_pred cCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCe---eEEEcCCC-----Ccchhhh---hHHHHHHH
Q 004726 446 FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRA---FFPYSQSA 505 (733)
Q Consensus 446 ~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~---~v~v~d~p-----Gfi~nRl---~~~~~~Ea 505 (733)
+|....+.- .++.|. .++++.+.++++++.+++. ++++++.. .++.|-+ ..+++||+
T Consensus 157 --~Pe~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 233 (446)
T 4a7p_A 157 --NPEFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEI 233 (446)
T ss_dssp --CCCCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CcccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333222211 234332 3689999999999998875 57776522 2444533 24678999
Q ss_pred HHHHHc-CCCHHHHHHHH
Q 004726 506 RLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 506 ~~l~~~-Gv~~~dID~a~ 522 (733)
..+.+. |++++++-.++
T Consensus 234 ~~l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 234 ADLCEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 988866 99999999888
No 134
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.43 E-value=6.2e-13 Score=145.10 Aligned_cols=196 Identities=16% Similarity=0.196 Sum_probs=131.0
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHH----hhccccccCc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~----~~~i~~~~~~ 382 (733)
.++||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+.....++. .+++.+++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcCH
Confidence 35689999999999999999998 999999999999988754310 01111111211 1367788887
Q ss_pred -cccCCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccCCCCcEEEEecCCC
Q 004726 383 -SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTSSQDRIIGAHFFSP 449 (733)
Q Consensus 383 -~~l~~aDlVI~avpe~~---------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~~~~~~ig~h~~~p 449 (733)
+++++||+||+|||++. .....+.+.+.+ ++++++|+ ..||+++.. +.+.+.. . ++.| +|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV-~~STv~pgtt~~l~~~l~~--~--~v~~-sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMI-IKSTIPVGFTRDIKERLGI--D--NVIF-SP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEE-ECSCCCTTHHHHHHHHHTC--C--CEEE-CC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEE-EeCCCChHHHHHHHHHHhh--c--cEee-cC
Confidence 77899999999999864 355677788888 88898876 466666543 3333321 2 2222 55
Q ss_pred CCCCCee---------EEecCCCCCHHHHHHHHHHHHH--cCC-eeEEEcC-----CCCcchhhh---hHHHHHHHHHHH
Q 004726 450 AHVMPLL---------EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGN-----CTGFAVNRA---FFPYSQSARLLV 509 (733)
Q Consensus 450 ~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~--lG~-~~v~v~d-----~pGfi~nRl---~~~~~~Ea~~l~ 509 (733)
....+.- .++.|. +++..+.+.+++.. ++. .++++.+ ...++.|-+ ..+++||+..+.
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444321 244443 45677888999886 553 3565543 112344543 246789999888
Q ss_pred Hc-CCCHHHHHHHH
Q 004726 510 SL-GVDVFRIDSAI 522 (733)
Q Consensus 510 ~~-Gv~~~dID~a~ 522 (733)
+. |++++++-.++
T Consensus 255 e~~GiD~~~v~~~~ 268 (432)
T 3pid_A 255 ESQGLNSKQIIEGV 268 (432)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 66 99999998888
No 135
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.42 E-value=6.4e-13 Score=145.29 Aligned_cols=194 Identities=14% Similarity=0.113 Sum_probs=131.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH--------HHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~--------i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
.|..|||+|.||.++|.+|+++||+|++||+++++++...+. +...+.+.+. .+++.+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~------------~g~l~~tt 79 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLS------------SGKLKVST 79 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEEES
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcc------------cCceEEeC
Confidence 589999999999999999999999999999999998875321 0111111111 24677777
Q ss_pred CccccCCCCEEEEeccCChH----------HHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhccc----C-CC----CcE
Q 004726 381 DYSEFKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQ----DRI 441 (733)
Q Consensus 381 ~~~~l~~aDlVI~avpe~~~----------~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~----~-~~----~~~ 441 (733)
+ +++||+||.|||.+.+ ......+.+.+.++++++|+. .||+++....+.. . .. ..|
T Consensus 80 d---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d~ 155 (431)
T 3ojo_A 80 T---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGEDI 155 (431)
T ss_dssp S---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTTE
T ss_pred c---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCCe
Confidence 6 4589999999997652 345556789999999998764 5666665332221 1 11 112
Q ss_pred EEEecCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-----CCcchhhhh---HHHHHH
Q 004726 442 IGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-----TGFAVNRAF---FPYSQS 504 (733)
Q Consensus 442 ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~-----pGfi~nRl~---~~~~~E 504 (733)
.-+ ++|....+.- .++.|. ++++.+.++++++.+++.++++++. ..++.|-++ .+++||
T Consensus 156 ~v~--~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE 231 (431)
T 3ojo_A 156 YLV--HCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANE 231 (431)
T ss_dssp EEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE--ECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2443332221 355553 6899999999999999888877542 123334332 467899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 004726 505 ARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 505 a~~l~~~-Gv~~~dID~a~ 522 (733)
+..+.+. |+++.++-.++
T Consensus 232 ~~~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 232 LTKICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 9988876 99999999888
No 136
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.42 E-value=1.1e-13 Score=145.55 Aligned_cols=180 Identities=18% Similarity=0.141 Sum_probs=124.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~a 388 (733)
||+|||+|.||.++|..|++.|++|++||+++++++...+ .| +..+++. +.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~~ 57 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------AG-------------EQVVSSPADVAEKA 57 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------TT-------------CEECSSHHHHHHHC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeecCCHHHHHhcC
Confidence 6999999999999999999999999999999988765421 11 3334444 557889
Q ss_pred CEEEEeccCChHHHHHHHHH---HHHhCCCCeEEEecCCCCCHHHHhcc---cCCCCcEEEEecCCCCCCC-------Ce
Q 004726 389 DMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGEK---TSSQDRIIGAHFFSPAHVM-------PL 455 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~---l~~~~~~~~ii~s~tS~~~~~~l~~~---~~~~~~~ig~h~~~p~~~~-------~l 455 (733)
|+||+|+|.+..++. ++.+ +.+.++++++|++ +|++.+...... .... +.+|.+.|... +.
T Consensus 58 Dvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~~ 131 (296)
T 2gf2_A 58 DRIITMLPTSINAIE-AYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSGN 131 (296)
T ss_dssp SEEEECCSSHHHHHH-HHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHTC
T ss_pred CEEEEeCCCHHHHHH-HHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcCc
Confidence 999999985555544 4444 3345678888887 888887654432 2211 22333322111 12
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC--c---chhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG--F---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG--f---i~nRl~~----~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
..++.+ .+++.++.+.++++.+|..++.+++ .| . ++|+.+. .+++|++.+.+. |+++++++.++
T Consensus 132 ~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 132 LTFMVG--GVEDEFAAAQELLGCMGSNVVYCGA-VGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp EEEEEE--SCGGGHHHHHHHHTTTEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 334444 3688999999999999999888876 33 1 2243432 467899987765 89999999988
No 137
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.42 E-value=2e-12 Score=143.21 Aligned_cols=200 Identities=15% Similarity=0.075 Sum_probs=134.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHH------HhhccccccCc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN------ALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~------~~~~i~~~~~~ 382 (733)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.. ..+.....+. ..+++.+++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~----------~~i~e~gl~~~l~~~~~~~~l~~t~d~ 72 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGT----------IPIYEPGLEKMIARNVKAGRLRFGTEI 72 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTC----------SCCCSTTHHHHHHHHHHTTSEEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCC----------CcccCCCHHHHHHhhcccCcEEEECCH
Confidence 4899999999999999999999999999999999887753310 0000000010 12467778887
Q ss_pred -cccCCCCEEEEeccCCh--------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccCC-------CCcEEE
Q 004726 383 -SEFKDVDMVIEAVIESV--------PLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTSS-------QDRIIG 443 (733)
Q Consensus 383 -~~l~~aDlVI~avpe~~--------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~~-------~~~~ig 443 (733)
+++++||+||+|||.+. ....++++++.+.++++++|++. ||+++.. +.+.+.. ...+.-
T Consensus 73 ~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgt~~~l~~~l~~~~~~~~~~~d~~v 151 (450)
T 3gg2_A 73 EQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTK-STVPVGSYRLIRKAIQEELDKREVLIDFDI 151 (450)
T ss_dssp HHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC-SCCCTTHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEe-eeCCCcchHHHHHHHHHhccccCcCcceeE
Confidence 46899999999998664 26778889999999999988654 4555432 2222110 011211
Q ss_pred EecCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCC--eeEEEcCCC-----Ccchhhh---hHHHHHH
Q 004726 444 AHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCT-----GFAVNRA---FFPYSQS 504 (733)
Q Consensus 444 ~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~--~~v~v~d~p-----Gfi~nRl---~~~~~~E 504 (733)
. ++|....+.. .++.|. .++++.+.++++++.+++ .++++++.. +++.|-+ ..+++||
T Consensus 152 ~--~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE 228 (450)
T 3gg2_A 152 A--SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMND 228 (450)
T ss_dssp E--ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E--echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1343333221 133332 368999999999999987 366665532 3455643 3567899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 004726 505 ARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 505 a~~l~~~-Gv~~~dID~a~ 522 (733)
+..+.+. |++++++-.++
T Consensus 229 ~~~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 229 VANLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 9988877 99999999998
No 138
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.42 E-value=2.8e-13 Score=150.91 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHH
Q 004726 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLD 536 (733)
Q Consensus 463 ~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~~~~~Ea~~l~~~Gv--~~~dID~a~-~~~G~p~---Gpf~~~D 536 (733)
.+++++.+.+.++.+.+|+.++.+ .+|+|+||++.+++|||++++++|+ +++|||.+| .++|||+ |||+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D 408 (463)
T 1zcj_A 331 KPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAA 408 (463)
T ss_dssp EECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHH
Confidence 468999999998888888765543 3799999999999999999999997 599999999 9999998 9999999
Q ss_pred hhchHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHcCC
Q 004726 537 LAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGR 572 (733)
Q Consensus 537 ~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~g~ 572 (733)
.+|+|+++++++.+++.+++ ++.|+++|++|+++|+
T Consensus 409 ~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 409 SVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 99999999999999999998 5669999999999886
No 139
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.42 E-value=2.9e-12 Score=135.61 Aligned_cols=168 Identities=14% Similarity=0.183 Sum_probs=111.4
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc---cc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY---SE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~---~~ 384 (733)
++||+|||+|.||.++|..|+++|++|++||+++++++...+. |.............+..+++. +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-----------GLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-----------CEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-----------CEEEEeCCCeeEecceeecchhhccc
Confidence 3589999999999999999999999999999999887664321 100000000000112222322 23
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH-HHHhcccCCCCcEE-EEecCCCCCCCC--------
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVMP-------- 454 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~~~i-g~h~~~p~~~~~-------- 454 (733)
++++|+||+|+| .....++++++.+.++++++|++.++++.. ..+.+.+. +.+++ |.++...+..+|
T Consensus 72 ~~~~d~vi~~v~--~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTK--AQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSC--HHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEec--cccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEecC
Confidence 448999999999 456688889999999999998888777765 44555543 23677 444332222221
Q ss_pred -eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004726 455 -LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (733)
Q Consensus 455 -lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 489 (733)
.+.+.....++++..+.+.++++.+|..+++..+.
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 12344444567899999999999999887776653
No 140
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.41 E-value=8.8e-13 Score=138.74 Aligned_cols=188 Identities=18% Similarity=0.206 Sum_probs=126.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
+||+|||+|.||..+|..|++.|++|++||+++++++...+ .| +..++++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 38999999999999999999999999999999988765421 12 2334444 55788
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCH--HHHhcccCC-CCcEEEEecC-CCC-CCCCeeEEec
Q 004726 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF-SPA-HVMPLLEIVR 460 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~-~~~~ig~h~~-~p~-~~~~lveiv~ 460 (733)
+|+||+|+|.+..++..++ +++.+.++++++|++.+++.+. ..+.+.+.. ...++....+ +++ .....+.++.
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999996665554443 5677888899988765544432 345444432 2233322111 000 0011234444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCcc---hhhhh----HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 461 TERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~pGfi---~nRl~----~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
+. +++.++.+.++++.+|..++++++ ..|.. +|+.+ ...++|++.+.+. |+++++++.++
T Consensus 142 ~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 142 GG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp ES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 43 789999999999999999988865 33332 13332 3567898887755 89999998887
No 141
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.41 E-value=5.7e-13 Score=148.82 Aligned_cols=202 Identities=16% Similarity=0.177 Sum_probs=136.7
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCC--CHHHHHHHh-----hcccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL--TQDKANNAL-----KMLKG 378 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~--~~~~~~~~~-----~~i~~ 378 (733)
|+||+|||+|.||.++|..|+++ |++|++||+++++++... .+.. .....+..+ .++.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~------------~g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN------------SPTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT------------SSSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh------------CCCCCcCCCCHHHHHHHhhcCCEEE
Confidence 46899999999999999999999 899999999999877632 1111 000011111 24666
Q ss_pred ccCc-cccCCCCEEEEeccCChHH-------------HHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccCCC-Cc
Q 004726 379 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTSSQ-DR 440 (733)
Q Consensus 379 ~~~~-~~l~~aDlVI~avpe~~~~-------------k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~~~-~~ 440 (733)
++++ +++++||+||+|||.+... ...+.+++.+.++++++|+ ++|+.++.. +.+.+... ..
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVT-EKSTVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEE-ECSCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEE-ECCcCCchHHHHHHHHHHHhCCC
Confidence 6776 5788999999999865532 4566778888889998875 455554432 33222211 11
Q ss_pred EEEEe-cCCCCCCCCeeE---------E-ecCCC--CCHHHHHHHHHHHHHc-CCeeEEEcC-----CCCcchhhh---h
Q 004726 441 IIGAH-FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRA---F 498 (733)
Q Consensus 441 ~ig~h-~~~p~~~~~lve---------i-v~~~~--t~~e~~~~~~~l~~~l-G~~~v~v~d-----~pGfi~nRl---~ 498 (733)
.+..+ .++|....+... + +.++. +++++.+.+.++++.+ |+.++++++ ..+++.|.+ .
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 11111 235555444332 3 34433 3788999999999998 777888764 346777875 3
Q ss_pred HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 499 FPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 499 ~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
.+++||+..+.+. |++++++..++
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 5788999998877 89999999998
No 142
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.9e-13 Score=134.94 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=111.6
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCCeeEE-EeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~-~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
+.|+||+|||+|.||.++|..|+++|++|++ +|++++++++..+.. | .....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4567999999999999999999999999999 999999877643211 1 1112334466
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--------------CHHHHhcccCCCCcEEEEecCCCC
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 450 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--------------~~~~l~~~~~~~~~~ig~h~~~p~ 450 (733)
++++|+||+|+| +....++++++.+ + ++++|++.+.++ ....+++.+. ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 889999999998 6777788877765 4 477888877766 3455666554 4567766654433
Q ss_pred CCC---------CeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 451 HVM---------PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 451 ~~~---------~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
... +...++.+ .+++..+.+.++++.+|+.++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 221 12233344 3699999999999999999999875
No 143
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.39 E-value=3.1e-13 Score=141.90 Aligned_cols=183 Identities=17% Similarity=0.160 Sum_probs=125.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++||+|||+|.||..+|..|++.|++|++|| ++++++...+ .| +...++. +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 3589999999999999999999999999999 8877655321 12 2233444 5578
Q ss_pred CCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEEecCCCCCC--------CC
Q 004726 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV--------MP 454 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~~~ig~h~~~p~~~--------~~ 454 (733)
+||+||+|+|.+..++..+.. ++.+.++++++|++.+++.+ ...+.+.+... +.||++.|.. ..
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g~ 133 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREGT 133 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHTC
T ss_pred cCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcCC
Confidence 999999999966555444332 56677888998876555532 23454444321 3444433321 13
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-CC----cchhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~-pG----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
+..++.+ +++.++.+.++++.+|..++++++. .+ ++.|.+ +...++|+..+.+. |++++++..++
T Consensus 134 ~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 134 LSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp EEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3434444 7899999999999999998888652 22 334543 23567899888866 89999998888
No 144
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.38 E-value=1.8e-12 Score=133.61 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=108.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCC----CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G----~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
+||+|||+|.||.++|..|+++| ++|++||+++++ .| +..+++. +
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~~ 54 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNEE 54 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHHH
Confidence 48999999999999999999999 799999998764 01 2233344 5
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCCCCCCeeE-EecCC
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRTE 462 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~~~~~lve-iv~~~ 462 (733)
.+++||+||+|+| .....+++.++.+.+ +++++++.++++++..+.+.+....+++...+..|......+. +++++
T Consensus 55 ~~~~~D~vi~~v~--~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 131 (262)
T 2rcy_A 55 LARHCDIIVCAVK--PDIAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNK 131 (262)
T ss_dssp HHHHCSEEEECSC--TTTHHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHhcCCEEEEEeC--HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeCC
Confidence 6788999999999 445678888888877 5667778889998887777665433444333333333333333 55677
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 463 RTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 463 ~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
.++++.++.+.++++.+|+ ++++++
T Consensus 132 ~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 7899999999999999997 777764
No 145
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.38 E-value=8.8e-13 Score=146.16 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=131.4
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHH------hhccccccCc-
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY- 382 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~------~~~i~~~~~~- 382 (733)
||+|||+|.||.++|..|+++|++|++||+++++++...+.. -.+.....+.. .+++.+++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~g~l~~t~~~~ 71 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK----------SPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC----------CCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence 799999999999999999999999999999999887643210 00000001111 2456777777
Q ss_pred cccCCCCEEEEeccCChH--------HHHHHHHHHHHhCCC---CeEEEecCCCCCHHH----HhcccCC--CCc-----
Q 004726 383 SEFKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLNI----VGEKTSS--QDR----- 440 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~--------~k~~v~~~l~~~~~~---~~ii~s~tS~~~~~~----l~~~~~~--~~~----- 440 (733)
+++++||+||+|||.+.. ....+++++.+.+++ +++|+. .|+.++.. +.+.+.. ..+
T Consensus 72 ~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l~~~l~~~~g~~~~~~~ 150 (436)
T 1mv8_A 72 KAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVVIPLIEDCSGKKAGVDF 150 (436)
T ss_dssp HHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTHHHHHHHHHSCCBTTTB
T ss_pred HHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHHHHHHHHhcCcccCCcE
Confidence 468999999999987554 134567888888888 887764 44544332 2222211 111
Q ss_pred EEEEecCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----CCCcchhhhh---HHHHH
Q 004726 441 IIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYSQ 503 (733)
Q Consensus 441 ~ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-----~pGfi~nRl~---~~~~~ 503 (733)
.+. ++|....+.. .++.|. ++++..+.+.++++.+|.. +++.+ ..+++.|.+. .+++|
T Consensus 151 ~v~---~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~n 225 (436)
T 1mv8_A 151 GVG---TNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFAN 225 (436)
T ss_dssp EEE---ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE---ECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 2444443322 244443 3689999999999999984 44443 2346667643 57889
Q ss_pred HHHHHHHc-CCCHHHHHHHH
Q 004726 504 SARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 504 Ea~~l~~~-Gv~~~dID~a~ 522 (733)
|+..+.+. |++++++..++
T Consensus 226 E~~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 226 EIGNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHh
Confidence 99988876 89999999988
No 146
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.38 E-value=3.1e-12 Score=137.40 Aligned_cols=169 Identities=13% Similarity=0.057 Sum_probs=114.6
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
+..+||+|||+|.||.++|..|+++|++|++||++++.++...+.-.+ .....|. ....++.+++++ ++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~---~~~l~g~-------~l~~~i~~t~d~~ea 96 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN---NRYLPNY-------PFPETLKAYCDLKAS 96 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSB---TTTBTTC-------CCCTTEEEESCHHHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC---cccCCCC-------ccCCCeEEECCHHHH
Confidence 334689999999999999999999999999999999987764321000 0000010 011345667777 57
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH------HHhcccCCCCcEEEEecCCCCC------C
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRIIGAHFFSPAH------V 452 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~------~l~~~~~~~~~~ig~h~~~p~~------~ 452 (733)
+++||+||+||| ....+++++++.+.++++++|++.++++.+. .+.+.+.. ..+.-. ..|.. .
T Consensus 97 ~~~aDvVilaVp--~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vl--sgP~~a~ev~~g 171 (356)
T 3k96_A 97 LEGVTDILIVVP--SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVI--SGPSLATEVAAN 171 (356)
T ss_dssp HTTCCEEEECCC--HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEE--ESSCCHHHHHTT
T ss_pred HhcCCEEEECCC--HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEE--ECccHHHHHHcC
Confidence 899999999999 6788899999999999999998888877764 23333331 122111 12221 1
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 004726 453 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (733)
Q Consensus 453 ~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG 491 (733)
.+..-++.+ .+++..+.+++++...+.++++..|..|
T Consensus 172 ~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 172 LPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp CCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred CCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 122222222 4789999999999998888887777543
No 147
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.37 E-value=1.8e-12 Score=145.05 Aligned_cols=200 Identities=14% Similarity=0.151 Sum_probs=133.9
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCC--HHHHHHH-----hhccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNA-----LKMLK 377 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~--~~~~~~~-----~~~i~ 377 (733)
+++||+|||+|.||.++|.+|+++ |++|++||+++++++...+ +... ....+.. .+++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~------------g~~~i~e~gl~~~~~~~~~~~l~ 75 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS------------DKLPIYEPGLDEIVFAARGRNLF 75 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHHhhcCCEE
Confidence 456999999999999999999998 7999999999998876421 1110 0011111 13467
Q ss_pred cccCc-cccCCCCEEEEeccCCh-------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccCC--C
Q 004726 378 GVLDY-SEFKDVDMVIEAVIESV-------------PLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTSS--Q 438 (733)
Q Consensus 378 ~~~~~-~~l~~aDlVI~avpe~~-------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~~--~ 438 (733)
+++++ +++++||+||+|||... .....+++.+.+.++++++|+. .||+++.. +.+.+.. .
T Consensus 76 ~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 76 FSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp EESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHTC
T ss_pred EECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHHHHHhhC
Confidence 77776 67899999999998654 2467778889999999998864 44555432 2222211 1
Q ss_pred ----Cc-EEEEecCCCCCCCCee---------EEecCCCCC---HHHHHHHHHHHHHcCC-eeEEEcC-----CCCcchh
Q 004726 439 ----DR-IIGAHFFSPAHVMPLL---------EIVRTERTS---AQVILDLMTVGKIIKK-VPVVVGN-----CTGFAVN 495 (733)
Q Consensus 439 ----~~-~ig~h~~~p~~~~~lv---------eiv~~~~t~---~e~~~~~~~l~~~lG~-~~v~v~d-----~pGfi~n 495 (733)
.. .+..+| ....+.. .++.|...+ +++++.+.++++.+++ .++++++ ...++.|
T Consensus 155 ~~~~~d~~v~~~P---e~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N 231 (481)
T 2o3j_A 155 NNENLKFQVLSNP---EFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVAN 231 (481)
T ss_dssp ----CCEEEEECC---CCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHH
T ss_pred cCcCCceEEEeCc---ccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHH
Confidence 11 233333 3222211 244332222 3688999999999996 6777654 3345667
Q ss_pred hh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 496 RA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 496 Rl---~~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
.+ ..+++||+..+.+. |++++++..++
T Consensus 232 ~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 232 AFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 53 45788999998877 99999999988
No 148
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.37 E-value=9.9e-13 Score=147.22 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=130.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
.+|+|||+|.||.+||..|+++|++|++||+++++++...+.. .. + ..+..++++ +.+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~~-~-----------~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANE-------AK-G-----------KSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT-------TT-T-----------SSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc-------cc-C-----------CCeEEeCCHHHHHhc
Confidence 5799999999999999999999999999999999887653200 00 0 124445555 34444
Q ss_pred ---CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCCC---CCCeeEE
Q 004726 388 ---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (733)
Q Consensus 388 ---aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~~---~~~lvei 458 (733)
||+||+|||.+..+ +.+++++.+.++++++|++.+++.+.. .+.+.+. ....|+++.....+. .++ .+
T Consensus 72 l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~i 148 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAPV-DALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--SL 148 (497)
T ss_dssp SCSSCEEEECCCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred CCCCCEEEEEcCChHHH-HHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--eE
Confidence 99999999965554 455688999999999888766555432 3443332 223455543222211 112 24
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCe------eEEEcC-CCC----cchhhhh---HHHHHHHHHHHHc--CCCHHHHHHHH
Q 004726 459 VRTERTSAQVILDLMTVGKIIKKV------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSAI 522 (733)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~------~v~v~d-~pG----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~dID~a~ 522 (733)
+.+. ++++++.++++++.+|+. ++++++ ..| ++.|.+. ...++|++.+.+. |++++++..++
T Consensus 149 m~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 149 MPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp EEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 4443 688999999999999988 666654 233 2356664 4567899998876 89999999887
Q ss_pred H
Q 004726 523 R 523 (733)
Q Consensus 523 ~ 523 (733)
.
T Consensus 227 ~ 227 (497)
T 2p4q_A 227 A 227 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 149
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.35 E-value=2.9e-12 Score=143.06 Aligned_cols=191 Identities=14% Similarity=0.066 Sum_probs=130.2
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.-++|+|||+|.||.+||..|+++|++|++||+++++++...+.. . + ..+..++++ +.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~--------~-~-----------~gi~~~~s~~e~v 73 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--------P-G-----------KKLVPYYTVKEFV 73 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--------T-T-----------SCEEECSSHHHHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC--------C-C-----------CCeEEeCCHHHHH
Confidence 346899999999999999999999999999999999877653210 0 0 124445555 445
Q ss_pred CC---CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCC---CCCCee
Q 004726 386 KD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (733)
Q Consensus 386 ~~---aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~---~~~~lv 456 (733)
++ ||+||.|||....+ +.+++++.+.++++++|++.+++.+.. .+.+.+. ...+++++.....+ ..++
T Consensus 74 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-- 150 (480)
T 2zyd_A 74 ESLETPRRILLMVKAGAGT-DAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-- 150 (480)
T ss_dssp HTBCSSCEEEECSCSSSHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hCCCCCCEEEEECCCHHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC--
Confidence 54 99999999965444 466688989999999888766665432 3444332 23355554221111 1222
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcCC-CC----cchhhhh---HHHHHHHHHHHHc--CCCHHHHH
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGNC-TG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d~-pG----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~dID 519 (733)
.++.+. +++.++.++++++.+|.. +.++++. .| ++.|.+. ...+.|++.+... |++++++.
T Consensus 151 ~i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~ 228 (480)
T 2zyd_A 151 SIMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELA 228 (480)
T ss_dssp EEEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred eEEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 244443 689999999999999987 5666642 12 2346553 4556799998876 99999988
Q ss_pred HHH
Q 004726 520 SAI 522 (733)
Q Consensus 520 ~a~ 522 (733)
.++
T Consensus 229 ~l~ 231 (480)
T 2zyd_A 229 QTF 231 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 150
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.35 E-value=3e-12 Score=141.99 Aligned_cols=192 Identities=13% Similarity=0.054 Sum_probs=129.2
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc-
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE- 384 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~- 384 (733)
.+++|+|||+|.||.+||..|+++|++|++||+++++++...+ .+... ..+..++++ +.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~g--------~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-----------NEAKG--------TKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-----------TTTTT--------SSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cccCC--------CceeccCCHHHHH
Confidence 3468999999999999999999999999999999998776532 11000 123333444 22
Q ss_pred --cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCC---CCCCee
Q 004726 385 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (733)
Q Consensus 385 --l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~---~~~~lv 456 (733)
++++|+||+|||.+..+ ..+++++.+.++++.+|++.+++.+.. .+.+.+. ....|++......+ ..++
T Consensus 64 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-- 140 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAV-DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-- 140 (484)
T ss_dssp HTBCSSCEEEECSCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hhccCCCEEEEecCChHHH-HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC--
Confidence 34699999999966554 456688999999999988766665433 2222222 23345554221111 1122
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCee-------EEEcCCCC------cchhhhh---HHHHHHHHHHHHc--CCCHHHH
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGNCTG------FAVNRAF---FPYSQSARLLVSL--GVDVFRI 518 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d~pG------fi~nRl~---~~~~~Ea~~l~~~--Gv~~~dI 518 (733)
-++.+. ++++++.++++++.+|..+ +++++ +| .+-|-+. ...++|++.+++. |++++++
T Consensus 141 ~im~GG--~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~-~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l 217 (484)
T 4gwg_A 141 SLMPGG--NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGD-EGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEM 217 (484)
T ss_dssp EEEEEE--CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEE-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHH
T ss_pred eeecCC--CHHHHHHHHHHHHHhcCcccCCCceEEEECC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 234443 6899999999999999877 67765 33 2334443 3456899999876 8899999
Q ss_pred HHHHH
Q 004726 519 DSAIR 523 (733)
Q Consensus 519 D~a~~ 523 (733)
-.++.
T Consensus 218 ~~v~~ 222 (484)
T 4gwg_A 218 AQAFE 222 (484)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88873
No 151
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.35 E-value=5.2e-12 Score=132.69 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=103.1
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEe
Q 004726 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (733)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav 105 (733)
++++++..+.+.++++.+++.. +-+|.|.-.++++. |.+..+. .......+.+ ..+..+++|+|++|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~~-g~~ae~~----------g~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAYP-GKAAEER----------GQSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-CHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCCc-chhhhhh----------hhHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999988664 55666653333222 2211110 1122333455 56899999999999
Q ss_pred CCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcC
Q 004726 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (733)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~ 185 (733)
+|.|.|||+.++++||+++|.++++|++ +.|.++++.++.+..+...+.++ ..++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999996 34666656555555555777776 7899999999999999998
Q ss_pred c
Q 004726 186 S 186 (733)
Q Consensus 186 ~ 186 (733)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 3
No 152
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.34 E-value=3.4e-12 Score=134.21 Aligned_cols=139 Identities=17% Similarity=0.115 Sum_probs=105.5
Q ss_pred cceEEEEc-CCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 308 VRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 308 ~~kI~VIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
++||+||| +|.||.++|..|++.|++|++||++++. +..+.++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~~ 64 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESILA 64 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHHT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHhc
Confidence 46899999 9999999999999999999999998752 0013467
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEEecCCCCC----CCCeeEEec
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIVR 460 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~~~ig~h~~~p~~----~~~lveiv~ 460 (733)
+||+||+||| +.....+++++.+.++++++|++.+|+.. +..+.+.. +.++++.||+.++. .+..+.+++
T Consensus 65 ~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~~ 140 (298)
T 2pv7_A 65 NADVVIVSVP--INLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRCD 140 (298)
T ss_dssp TCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEEE
T ss_pred CCCEEEEeCC--HHHHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEec
Confidence 8999999999 55578889999888999998765544322 23333332 46899999965443 233455555
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 461 TERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
+. +++.++.+.++++.+|..++++.+
T Consensus 141 ~~--~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 141 GR--FPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp EE--CGGGTHHHHHHHHHTTCEEEECCH
T ss_pred CC--CHHHHHHHHHHHHHcCCEEEECCH
Confidence 54 788899999999999999888753
No 153
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.34 E-value=6.1e-12 Score=140.62 Aligned_cols=191 Identities=13% Similarity=0.027 Sum_probs=129.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
.++|+|||+|.||.++|..|+++|++|++||+++++++...+.. . + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~--------~-~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEH--------Q-D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT--------T-T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhC--------c-C-----------CCeEEeCCHHHHHh
Confidence 35799999999999999999999999999999999877653211 0 0 124445555 3444
Q ss_pred ---CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccCC-CCcEEEEecCCCC---CCCCeeE
Q 004726 387 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLE 457 (733)
Q Consensus 387 ---~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~-~~~~ig~h~~~p~---~~~~lve 457 (733)
++|+||+|||....+ ..+++++.+.++++++|++.+++.+. ..+.+.+.. ...++++....++ ..++ .
T Consensus 65 ~l~~aDvVilavp~~~~v-~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAAT-DATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 499999999965554 45668888889889888876655543 344444432 2345544222111 1112 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe--------eEEEcCC-CC----cchhhhh---HHHHHHHHHHHHc--CCCHHHHH
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGNC-TG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~--------~v~v~d~-pG----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~dID 519 (733)
++++. +++..+.+.++++.+|.. +.++++. .| ++.|.+. ...+.|++.+.+. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 34443 789999999999999987 4555542 22 3456553 4567899998875 89999998
Q ss_pred HHHH
Q 004726 520 SAIR 523 (733)
Q Consensus 520 ~a~~ 523 (733)
.++.
T Consensus 220 ~l~~ 223 (474)
T 2iz1_A 220 AIFE 223 (474)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8873
No 154
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.32 E-value=2.9e-12 Score=133.96 Aligned_cols=183 Identities=15% Similarity=0.054 Sum_probs=122.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
+||+|||+|.||..+|..|++ |++|++||+++++++...+. | +..++..+.++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~~ 56 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAEA 56 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGGC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhCC
Confidence 579999999999999999999 99999999999887664221 1 1112222567899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEEecCCC-CC---CCCeeEEecC
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSP-AH---VMPLLEIVRT 461 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~-~~~~ig~h~~~p-~~---~~~lveiv~~ 461 (733)
|+||+|+|.+..++ .+++++.+.++++++|++.++..+ ...+.+.+.. ...++.. |..+ +. ...+..++.
T Consensus 57 D~vi~~v~~~~~~~-~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~- 133 (289)
T 2cvz_A 57 RVIFTCLPTTREVY-EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG- 133 (289)
T ss_dssp SEEEECCSSHHHHH-HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE-
T ss_pred CEEEEeCCChHHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC-
Confidence 99999999554444 466788888888988874433322 2344444432 2234433 2111 10 112222333
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCC-C----cchhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCT-G----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~p-G----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
.+++.++.+.+++ .+|..++++++.. + ++.|.+ +...++|++.+.+. |++++++..++
T Consensus 134 --~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 --GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp --SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred --CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 3789999999999 9999888887632 2 223543 34567899888765 89999988887
No 155
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.31 E-value=3.8e-12 Score=136.12 Aligned_cols=181 Identities=16% Similarity=0.095 Sum_probs=122.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHH-HHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~-~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++|+|||+|.||.++|..|++.|++|+++|++++. .+.+. +.| +..+ +. +.++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~~ 71 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAVA 71 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHHh
Confidence 57999999999999999999999999999999765 33221 112 2223 33 5678
Q ss_pred CCCEEEEeccCChHHHHHHHH-HHHHhCCCCeEEEecCCCCCHHHHhccc-CCCCcEEEEecCCCCCC---------CCe
Q 004726 387 DVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MPL 455 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~-~l~~~~~~~~ii~s~tS~~~~~~l~~~~-~~~~~~ig~h~~~p~~~---------~~l 455 (733)
+||+||+|+| ......++. ++.+.++++++|++. +++.+ .+.... .....+++.||..|.+. +..
T Consensus 72 ~aDvVilavp--~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~ 147 (338)
T 1np3_A 72 AADVVMILTP--DEFQGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIP 147 (338)
T ss_dssp TCSEEEECSC--HHHHHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCC
T ss_pred cCCEEEEeCC--cHHHHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCe
Confidence 9999999999 555678888 888889999988865 44444 333322 12235999999776531 223
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHcCC-e--eEEEc----C-CCCcchhhhhH----HHHHHHH-HHHHcCCCHHHH
Q 004726 456 LEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFF----PYSQSAR-LLVSLGVDVFRI 518 (733)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~-~--~v~v~----d-~pGfi~nRl~~----~~~~Ea~-~l~~~Gv~~~dI 518 (733)
+-++++..++++..+.+..+++.+|. . ++.+. + ...++.+..+. +++..++ .+++.|+++++.
T Consensus 148 ~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 148 DLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 33566667788999999999999998 4 55552 1 22343333322 2333333 335678877654
No 156
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.30 E-value=8.8e-12 Score=131.26 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=107.7
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEe
Q 004726 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (733)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav 105 (733)
++++++..+.+.++++.++... +-+|.|.-.++++. |....+. .......+.+ ..+..+++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999888664 55666654333222 2211110 1122333455 56899999999999
Q ss_pred CCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHHHHcCCccEEcC
Q 004726 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (733)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA~~~Glv~~vv~ 185 (733)
+|.|.|||+.++++||+++|.++++|++ +.|.++++.++++..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999997 46778888888888888888887 6799999999999999998
Q ss_pred c
Q 004726 186 S 186 (733)
Q Consensus 186 ~ 186 (733)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 3
No 157
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.29 E-value=2.2e-11 Score=132.82 Aligned_cols=204 Identities=17% Similarity=0.161 Sum_probs=131.8
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH--------HHHHHHHhHhcCCCCHHHHHHHhhcccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 378 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~--------i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (733)
+|.+|+|||+|.+|.++|.+|++.|++|+++|+|+++++...+. +...+.+.++. +++.+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~------------g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSS------------GRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT------------TCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHc------------CCeeE
Confidence 57899999999999999999999999999999999998875321 11222222222 46788
Q ss_pred ccCc-cccCCCCEEEEeccC--------ChHHHHHHHHHHHHhCC---CCeEEEecCCCCCHHHHhcc----c---CCCC
Q 004726 379 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLNIVGEK----T---SSQD 439 (733)
Q Consensus 379 ~~~~-~~l~~aDlVI~avpe--------~~~~k~~v~~~l~~~~~---~~~ii~s~tS~~~~~~l~~~----~---~~~~ 439 (733)
+++. +++++||++|.|||. |+.......+.+.+.++ ++.+|+. -||.++....+. + ....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 8887 668999999999974 44556666677776664 4556543 455544322211 1 1111
Q ss_pred cE-EEEecCCCCCCCCe---------eEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc----CCCCcchhhhh---HHHH
Q 004726 440 RI-IGAHFFSPAHVMPL---------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVG----NCTGFAVNRAF---FPYS 502 (733)
Q Consensus 440 ~~-ig~h~~~p~~~~~l---------veiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~----d~pGfi~nRl~---~~~~ 502 (733)
.| ++. +|-.+.+. --++.| .+++++.+.+.++++.+....+++. +...++.|-+. .+++
T Consensus 167 ~f~v~~---~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 167 KFSVAS---NPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp CCEEEE---CCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cceeec---CcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 22 222 33333221 012323 2468888999999988876655543 22335556442 5789
Q ss_pred HHHHHHHHc-CCCHHHHHHHH-H--hcCC
Q 004726 503 QSARLLVSL-GVDVFRIDSAI-R--SFGL 527 (733)
Q Consensus 503 ~Ea~~l~~~-Gv~~~dID~a~-~--~~G~ 527 (733)
||...+.+. |+++.+|-.++ . .+|+
T Consensus 243 NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 998777766 99999998887 3 4554
No 158
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.27 E-value=2.3e-11 Score=125.45 Aligned_cols=173 Identities=14% Similarity=0.096 Sum_probs=113.5
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeC--ChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
||+|||+|.||.++|..|+++|++|++||+ +++.++...+ .| +. ++. +.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~~ 55 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDVY 55 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHHh
Confidence 799999999999999999999999999998 6666554311 12 12 233 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH---HHHhcccCCCCcEEEEecCCCCC---CCCeeEEec
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIVR 460 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~---~~l~~~~~~~~~~ig~h~~~p~~---~~~lveiv~ 460 (733)
+||+||+|||.+...+. +.++.+.+++ ++++ +|+..+ ..+.+.+.... ++..+.+.++. .... .++.
T Consensus 56 ~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~-~s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~~ 128 (264)
T 1i36_A 56 SCPVVISAVTPGVALGA--ARRAGRHVRG--IYVD-INNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIAS 128 (264)
T ss_dssp TSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEE-CSCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEEE
T ss_pred cCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEE-ccCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEec
Confidence 99999999996655433 3567666666 4444 345543 24555554433 66666655442 1222 3444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----chhhhh----HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004726 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (733)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGf-----i~nRl~----~~~~~Ea~~l~~~-Gv~~~dID~a~ 522 (733)
++. . +.+.+ ++.+|+.++++++.+|. ++|..+ ...++|++.+.+. |++++.+ ..+
T Consensus 129 g~~--~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~-~~~ 193 (264)
T 1i36_A 129 GRD--A---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVL-EML 193 (264)
T ss_dssp STT--H---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHH
T ss_pred CCc--H---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHH
Confidence 432 2 67788 99999999988865664 233332 3557798887755 8987644 444
No 159
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.26 E-value=1e-11 Score=123.57 Aligned_cols=156 Identities=15% Similarity=0.167 Sum_probs=112.3
Q ss_pred eEEEEc-CCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 310 kI~VIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
||+||| +|.||..++..|++.|++|+++|+++++.+...+.+.. .+.. ..+.. ++. +.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~~ 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAEA 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHhc
Confidence 799999 99999999999999999999999999887664332110 1110 11222 233 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--------------HHHHhcccCCCCcEEEEecCCCC---
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPA--- 450 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--------------~~~l~~~~~~~~~~ig~h~~~p~--- 450 (733)
||+||+|+| .....+++.++.+.++ ++++++.++++. .+++++.+. ..+++..|+..+.
T Consensus 65 ~D~Vi~~~~--~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~v~~~~~~~~~~~ 140 (212)
T 1jay_A 65 CDIAVLTIP--WEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-SEKVVSALHTIPAARF 140 (212)
T ss_dssp CSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-CSCEEECCTTCCHHHH
T ss_pred CCEEEEeCC--hhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-CCeEEEEccchHHHHh
Confidence 999999999 5556678888777664 888888887665 466666654 3678877643332
Q ss_pred ----CCCCeeEEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcC
Q 004726 451 ----HVMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 488 (733)
Q Consensus 451 ----~~~~lveiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d 488 (733)
....+..+++++ +++.++.+.++++.+ |+.++++++
T Consensus 141 ~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 141 ANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 112245566665 689999999999999 999999976
No 160
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.24 E-value=3.1e-11 Score=134.89 Aligned_cols=193 Identities=12% Similarity=0.068 Sum_probs=127.9
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC--
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK-- 386 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~-- 386 (733)
||+|||+|.||.++|..|+++|++|++||+++++++...+. .|... . -..+..++++ +.++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~g~~~-~-----~~~i~~~~~~~e~v~~l 66 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA----------NASAP-F-----AGNLKAFETMEAFAASL 66 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----------TTTST-T-----GGGEEECSCHHHHHHHB
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCCC-C-----CCCeEEECCHHHHHhcc
Confidence 69999999999999999999999999999999987765321 01100 0 0124445555 3344
Q ss_pred -CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEEecCCCCC---CCCeeEEe
Q 004726 387 -DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEIV 459 (733)
Q Consensus 387 -~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~-~~~~~ig~h~~~p~~---~~~lveiv 459 (733)
++|+||+|||....+ ..+++++.+.++++++|++.+++.+. ..+.+.+. ....++++....++. .++ .++
T Consensus 67 ~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i~ 143 (478)
T 1pgj_A 67 KKPRKALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AFF 143 (478)
T ss_dssp CSSCEEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EEE
T ss_pred cCCCEEEEecCChHHH-HHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eEe
Confidence 599999999965444 45568888889989888766555543 23444333 233455543222111 122 234
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCe-------eEEEcCC-CC----cchhhhh---HHHHHHHHHHHHc-CCCHHHHHHHHH
Q 004726 460 RTERTSAQVILDLMTVGKIIKKV-------PVVVGNC-TG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAIR 523 (733)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d~-pG----fi~nRl~---~~~~~Ea~~l~~~-Gv~~~dID~a~~ 523 (733)
.+. +++..+.+.++++.+|.. ++++++. .| ++.|.+. ...++|++.+.+. |++++++..++.
T Consensus 144 ~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 144 PGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp EEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 433 689999999999999987 5555542 12 2345443 3567899888765 899999988873
No 161
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.22 E-value=3.7e-11 Score=122.54 Aligned_cols=164 Identities=13% Similarity=0.102 Sum_probs=100.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHH-HHHHH-HHHHHH-HHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGI-KTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~-~~~~~-~~i~~~-l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
.+||+|||+|.||.+||..|+++|++|++||+++++ +.+.. ..+.+. +..+.+ ..+.+..++..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~e~ 87 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP-----------EHPHVHLAAFADV 87 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-----------GSTTCEEEEHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-----------hcCceeccCHHHH
Confidence 468999999999999999999999999999999986 11100 000000 001111 1122333333367
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHH-HHhCCCCeEEEecCCCC----------------CH-HHHhcccCCCCcEEE-Ee
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRIIG-AH 445 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l-~~~~~~~~ii~s~tS~~----------------~~-~~l~~~~~~~~~~ig-~h 445 (733)
+++||+||+|||.+. ..+++.++ .+.+ ++++|++.+.++ .+ ..+++.++ ..+++. ++
T Consensus 88 ~~~aDvVilavp~~~--~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-~~~vv~~~~ 163 (245)
T 3dtt_A 88 AAGAELVVNATEGAS--SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-EAKVVKTLN 163 (245)
T ss_dssp HHHCSEEEECSCGGG--HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-TSEEEECST
T ss_pred HhcCCEEEEccCcHH--HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-CCeEEEeec
Confidence 889999999999443 33566667 5555 677777655321 22 23444443 245553 44
Q ss_pred cCCCCC--------CCCeeEEecCCCCCHHHHHHHHHHHHHcCCe-eEEEcC
Q 004726 446 FFSPAH--------VMPLLEIVRTERTSAQVILDLMTVGKIIKKV-PVVVGN 488 (733)
Q Consensus 446 ~~~p~~--------~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~-~v~v~d 488 (733)
+...+. ..++.-++.+. +++..+.+.++++.+|.. ++.+++
T Consensus 164 ~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 164 TMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred ccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCc
Confidence 432111 12333344443 799999999999999976 477876
No 162
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.22 E-value=2.2e-11 Score=136.35 Aligned_cols=191 Identities=13% Similarity=0.066 Sum_probs=127.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc--
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-- 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l-- 385 (733)
++|+|||+|.||.++|..|+++|++|++||+++++++...+. ...| ..+..++++ +.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~--------~~~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN--------EAKG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT--------TTTT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc--------cccC-----------CCeEEeCCHHHHHhh
Confidence 369999999999999999999999999999999987764320 0001 124445555 333
Q ss_pred -CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCCCC---CCCeeEE
Q 004726 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (733)
Q Consensus 386 -~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p~~---~~~lvei 458 (733)
+++|+||+|||....+ ..++.++.+.++++++|++.+++.+.. .+.+.+. ....++++....++. ..+ .+
T Consensus 64 l~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~--~i 140 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAV-DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP--SL 140 (482)
T ss_dssp BCSSCEEEECSCTTHHH-HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEeCCChHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC--eE
Confidence 5899999999965544 456678888999888888766555432 3433332 233455543222111 112 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-CCC----cchhhhh---HHHHHHHHHHHHc--CCCHHHHHHH
Q 004726 459 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (733)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d-~pG----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~dID~a 521 (733)
+.+. +++..+.+.++++.+|..+ +++++ ..| ++.|.+. ...++|++.+.+. |++++++..+
T Consensus 141 ~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 141 MPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 4433 5778999999999999876 44443 222 3456553 4567899988864 8899999888
Q ss_pred HH
Q 004726 522 IR 523 (733)
Q Consensus 522 ~~ 523 (733)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 163
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.18 E-value=2.9e-11 Score=120.21 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=100.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
.+||+|||+|.||.++|..|+++|++|++||++++ .+++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~~ 57 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATTL 57 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhcc
Confidence 46899999999999999999999999999998764 3578
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC---------------HHHHhcccCCCCcEEE-EecCCCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPAH 451 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~---------------~~~l~~~~~~~~~~ig-~h~~~p~~ 451 (733)
||+||+|+| ....+.+++++.+.++ ++++++.+++++ ...+++.++ ..+++. .|+...|.
T Consensus 58 aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p~ 133 (209)
T 2raf_A 58 GEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAAT 133 (209)
T ss_dssp CSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHHH
T ss_pred CCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHhh
Confidence 999999999 6666788888887777 888887777554 234444443 356777 56543221
Q ss_pred C--------CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 452 V--------MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 452 ~--------~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
. .+...++.+ .+++..+.+.++++.+|.+++.+++
T Consensus 134 ~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 134 LQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred ccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 1 122222333 3689999999999999999998887
No 164
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.18 E-value=5.4e-11 Score=128.81 Aligned_cols=169 Identities=12% Similarity=0.016 Sum_probs=104.0
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+.. ......... .....+..+++. ++++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKR-------ENVLFLKGV---QLASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHT-------BCTTTSTTC---BCCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC-------ccccccccc---ccccceeeeCCHHHHHc
Confidence 45899999999999999999999999999999998876643210 000000000 000134445555 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHH----HHHhCCC-CeEEEecCCCCCHHH---HhcccCC--CC-c-EEEEecCCCCC--C
Q 004726 387 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD-R-IIGAHFFSPAH--V 452 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~----l~~~~~~-~~ii~s~tS~~~~~~---l~~~~~~--~~-~-~ig~h~~~p~~--~ 452 (733)
+||+||+||| .....+++.+ +.+.+++ +++|++.++++.+.. +.+.+.. +. . .+...|..+.. .
T Consensus 85 ~aDvVilav~--~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~ 162 (366)
T 1evy_A 85 GAEIILFVIP--TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVAT 162 (366)
T ss_dssp TCSSEEECCC--HHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHT
T ss_pred CCCEEEECCC--hHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHh
Confidence 9999999999 5677788888 8888887 888887776665531 1111111 11 1 11111111110 0
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHHHHc--CCeeEEEcCC
Q 004726 453 MPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNC 489 (733)
Q Consensus 453 ~~lveiv~~~~t~~e~~~~~~~l~~~l--G~~~v~v~d~ 489 (733)
.....++.+ ..+++..+.+.+++... |..+++..|.
T Consensus 163 g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di 200 (366)
T 1evy_A 163 GVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDT 200 (366)
T ss_dssp TCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCH
T ss_pred CCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 111112222 23678899999999999 7776666654
No 165
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.17 E-value=1.9e-11 Score=121.99 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=100.3
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
.++||+|||+|.||..+|..|++.|++|+++|+++++++... +.| +..++..+.++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 82 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVTFQEEAVS 82 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEEEHHHHTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------CceecHHHHHh
Confidence 346899999999999999999999999999999988765431 111 22222225678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh----------cccCCCCcEEEEecCCCCC-----
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGAHFFSPAH----- 451 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~----------~~~~~~~~~ig~h~~~p~~----- 451 (733)
++|+||+|+|. .....+++ +.... ++++|++.+++.+++.+. +.+. ..+++.. + ++..
T Consensus 83 ~~DvVi~av~~--~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~-~-n~~~~~~~~ 155 (215)
T 2vns_A 83 SPEVIFVAVFR--EHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKA-F-NVISAWTLQ 155 (215)
T ss_dssp SCSEEEECSCG--GGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEE-C-TTBCHHHHH
T ss_pred CCCEEEECCCh--HHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEec-c-ccccHhHhc
Confidence 99999999994 33444554 55555 788888888888765542 2232 2345442 1 2211
Q ss_pred ----CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 452 ----~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
..+...++.+ .+++.++.+.++++.+|..++++++
T Consensus 156 ~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 156 AGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp TCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred ccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 1111122232 3799999999999999999999876
No 166
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.16 E-value=4.2e-11 Score=127.21 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=88.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+||+|||+|.||.++|..++..|+ +|++||+++++++.....+....... ....++..+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALI------------GSPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHH------------TCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhcc------------CCCCEEEECCCHHHHCC
Confidence 489999999999999999999999 99999999998886443333322211 01246777788889999
Q ss_pred CCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEE--EecCCCCCHHHHhcccC--CCCcEEEE
Q 004726 388 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 444 (733)
Q Consensus 388 aDlVI~av--pe------------~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~--~~~~~ig~ 444 (733)
||+||+++ |+ +..+++++++++.+++ +++++ +||++... +.++.... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 4578999999999998 55554 46654432 33333222 46677774
No 167
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.11 E-value=4.7e-10 Score=122.71 Aligned_cols=198 Identities=18% Similarity=0.169 Sum_probs=121.0
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHh----hccccccCc-c
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNAL----KMLKGVLDY-S 383 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g-~~~~~~~~~~~----~~i~~~~~~-~ 383 (733)
||+|||+|.||.++|..|++ |++|++||+++++++...+ .+ .+.....+..+ .++.+++++ +
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~-----------~~~~i~e~~l~~~~~~~~~~l~~t~~~~~ 69 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN-----------GLSPIQDEYIEYYLKSKQLSIKATLDSKA 69 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT-----------TCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc-----------CCCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence 79999999999999999999 9999999999998776422 11 11111111111 245666665 6
Q ss_pred ccCCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCeEEEe-cCCCCCH-HHHhcccCCCCcEEEEec--CCCC
Q 004726 384 EFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAHF--FSPA 450 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~---------~~k~~v~~~l~~~~~~~~ii~s-~tS~~~~-~~l~~~~~~~~~~ig~h~--~~p~ 450 (733)
++++||+||.|||... ....++++.+.+ ++++++|+. +|..... ..+.+.+.. ..+...| ..|.
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~--~~v~~~Pe~~~~G 146 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT--DRIIFSPEFLRES 146 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC--SCEEECCCCCCTT
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC--CeEEECCccccCc
Confidence 6889999999999763 256677788888 788888764 3322222 244443332 2222222 1111
Q ss_pred CCC-Cee---EEecCCCCC-----HHHHHHHHHHHHH-cCC-e-eEEEcCCC-----Ccchhhh---hHHHHHHHHHHHH
Q 004726 451 HVM-PLL---EIVRTERTS-----AQVILDLMTVGKI-IKK-V-PVVVGNCT-----GFAVNRA---FFPYSQSARLLVS 510 (733)
Q Consensus 451 ~~~-~lv---eiv~~~~t~-----~e~~~~~~~l~~~-lG~-~-~v~v~d~p-----Gfi~nRl---~~~~~~Ea~~l~~ 510 (733)
... ... .++.|.... .+..+.+.+++.. ... . ++++++.. .++.|-+ ..+++||+..+.+
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~ 226 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAE 226 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 000 133333221 1556777777765 322 2 56665522 3444543 2467899888886
Q ss_pred c-CCCHHHHHHHH
Q 004726 511 L-GVDVFRIDSAI 522 (733)
Q Consensus 511 ~-Gv~~~dID~a~ 522 (733)
. |+++.++-.++
T Consensus 227 ~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 227 SRKLNSHMIIQGI 239 (402)
T ss_dssp HTTCCHHHHHHHH
T ss_pred HhCCCHHHHHHHh
Confidence 6 99999999888
No 168
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.11 E-value=8.9e-11 Score=124.26 Aligned_cols=123 Identities=20% Similarity=0.302 Sum_probs=87.9
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
++||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+...+... ....++..++++++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMA------------YSNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHH------------TCCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhc------------CCCcEEEECCCHHHhC
Confidence 4689999999999999999999998 99999999998876544443332211 0123566777888999
Q ss_pred CCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCeEE--EecCCCCCHHHHhcccC--CCCcEEE
Q 004726 387 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 443 (733)
Q Consensus 387 ~aDlVI~av--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~--~~~~~ig 443 (733)
+||+||+++ |+++ .+++++++++.+++ +++++ +||.+.+. +.+..... .+.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 6532 47899999999998 56654 45554443 33333222 4567766
Q ss_pred E
Q 004726 444 A 444 (733)
Q Consensus 444 ~ 444 (733)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 4
No 169
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.10 E-value=1.5e-10 Score=125.36 Aligned_cols=154 Identities=11% Similarity=0.050 Sum_probs=109.5
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC------CCeeEEEeCChH-HHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~------G~~V~~~d~~~e-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
++||+|||+|.||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... -....
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~---------d~ta~ 113 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE---------SGTLG 113 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT---------TTCEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe---------cCCCC
Confidence 36899999999999999999999 999987766543 33322 12221100 00012
Q ss_pred Cc-cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhc---ccCCCCcEEEEecCCCCCC----
Q 004726 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV---- 452 (733)
Q Consensus 381 ~~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~---~~~~~~~~ig~h~~~p~~~---- 452 (733)
+. +++++||+||.++| +.....++.++.+.++++++| +.++++.+..+.+ .......++.+||..|.+.
T Consensus 114 s~aEAa~~ADVVILaVP--~~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~ 190 (525)
T 3fr7_A 114 DIWETVSGSDLVLLLIS--DAAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRL 190 (525)
T ss_dssp EHHHHHHHCSEEEECSC--HHHHHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHH
T ss_pred CHHHHHhcCCEEEECCC--hHHHHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHH
Confidence 33 67899999999999 454557888999999999985 6788888877664 3333457999999988874
Q ss_pred ---C-----Cee--EEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004726 453 ---M-----PLL--EIVRTERTSAQVILDLMTVGKIIKKVPV 484 (733)
Q Consensus 453 ---~-----~lv--eiv~~~~t~~e~~~~~~~l~~~lG~~~v 484 (733)
+ ..+ -+..+...+.+..+.+..++..+|...+
T Consensus 191 y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 191 YVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1 112 2334455677889999999999998753
No 170
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.09 E-value=1.1e-10 Score=125.89 Aligned_cols=169 Identities=16% Similarity=0.031 Sum_probs=106.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC-------CeeEEEeCChH-----HHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~e-----~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~ 375 (733)
++||+|||+|.||+++|..|+++| ++|++||++++ ..+...+. .......+. ......
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~--------~~~~~~~~~--~~~~~~ 77 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQ--------HENVKYLPG--HKLPPN 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHH--------SCCTTTSTT--CCCCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhc--------CcccccCCc--ccCccC
Confidence 458999999999999999999999 99999999987 65543210 000000000 000123
Q ss_pred cccccCc-cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--------HH-HhcccCCCCcEEEEe
Q 004726 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NI-VGEKTSSQDRIIGAH 445 (733)
Q Consensus 376 i~~~~~~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--------~~-l~~~~~~~~~~ig~h 445 (733)
+..+++. +++++||+||+||| .....++++++.+.++++++|++.++++.+ .+ +.+.+..+ ..+-..
T Consensus 78 ~~~~~~~~~~~~~aD~Vilav~--~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~~g 154 (354)
T 1x0v_A 78 VVAVPDVVQAAEDADILIFVVP--HQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVLMG 154 (354)
T ss_dssp EEEESSHHHHHTTCSEEEECCC--GGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEEEC
T ss_pred eEEEcCHHHHHcCCCEEEEeCC--HHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEEEC
Confidence 4555565 56789999999999 456788899999889999999888876653 11 11222211 111222
Q ss_pred cCCCCC--CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 004726 446 FFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490 (733)
Q Consensus 446 ~~~p~~--~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~p 490 (733)
|..+.. ......++.+ ..+++..+.+.+++...|..+.+..|..
T Consensus 155 p~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~ 200 (354)
T 1x0v_A 155 ANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVD 200 (354)
T ss_dssp SCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHH
T ss_pred CCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCch
Confidence 221111 0111112222 2468889999999999998877776643
No 171
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.08 E-value=1.7e-10 Score=125.37 Aligned_cols=169 Identities=11% Similarity=-0.015 Sum_probs=107.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC-------CeeEEEeCChH-----HHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHhh
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRG-KLTQDKANNALK 374 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~e-----~~~~~~~~i~~~l~~~~~~g-~~~~~~~~~~~~ 374 (733)
++||+|||+|.||++||..|+++| ++|++||++++ .++...+. .... .+... ....
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~--------~~~~~~~~~~---~~~~ 89 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNK--------HENTKYLKGV---PLPH 89 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHH--------CBCTTTSTTC---BCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhc--------CcccccCCcc---cCcC
Confidence 358999999999999999999999 99999999987 54443210 0000 00000 0012
Q ss_pred ccccccCc-cccCCCCEEEEeccCChHHHHHHHHHHHH----hCCCCeEEEecCCCCCHH-----HH----hcccCCCCc
Q 004726 375 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDLN-----IV----GEKTSSQDR 440 (733)
Q Consensus 375 ~i~~~~~~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~----~~~~~~ii~s~tS~~~~~-----~l----~~~~~~~~~ 440 (733)
.+..+++. +++++||+||+||| .....+++.++.+ .++++++|++.++++.+. .+ .+....+ .
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~--~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~ 166 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVP--CQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-C 166 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCC--HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-E
T ss_pred CeEEECCHHHHHcCCCEEEEcCC--HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-E
Confidence 35556666 56789999999999 5788889999988 888899998888776541 11 1212111 1
Q ss_pred EEEEecCCCCC--CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 004726 441 IIGAHFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (733)
Q Consensus 441 ~ig~h~~~p~~--~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG 491 (733)
.+-..|..+.. ......++.+ ..+++..+.+.+++...|..+.+..|..|
T Consensus 167 ~v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 167 SALSGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp EEEECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred EEEeCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 11111211110 0111112222 23678899999999999988888777543
No 172
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.06 E-value=7.9e-11 Score=123.01 Aligned_cols=168 Identities=10% Similarity=-0.053 Sum_probs=106.7
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aD 389 (733)
||+|||+|.||+++|..|+++|++|++||+++++++.. ...+.-. . .....+. .++.+.++++|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~-~---~~~~~~~-~~~~~~~~~~d 65 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETDG-S---IFNESLT-ANDPDFLATSD 65 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTTS-C---EEEEEEE-ESCHHHHHTCS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCCC-c---eeeeeee-ecCccccCCCC
Confidence 79999999999999999999999999999998654321 1111000 0 0000111 23345678899
Q ss_pred EEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH-HHhcccCCCCcEE-EEecCCCCCCCC-e-------eEEe
Q 004726 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFFSPAHVMP-L-------LEIV 459 (733)
Q Consensus 390 lVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~~~i-g~h~~~p~~~~~-l-------veiv 459 (733)
+||.|+|.. ...++++++.+.++++++|++.++++... .+.+.+. . ++ |.++......+| . +.+.
T Consensus 66 ~vi~~v~~~--~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p~~~~~~~g~~~i~ 140 (291)
T 1ks9_A 66 LLLVTLKAW--QVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGNVIIHVANGITHIG 140 (291)
T ss_dssp EEEECSCGG--GHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETTEEEEEECCCEEEE
T ss_pred EEEEEecHH--hHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCCEEEEecccceEEc
Confidence 999999954 35788889999898898888777776553 3444332 2 44 433321111111 1 1122
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhH
Q 004726 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (733)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~ 499 (733)
... .+++.++.+.++++.+|..+.+.++..+...+.+..
T Consensus 141 ~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~ 179 (291)
T 1ks9_A 141 PAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAV 179 (291)
T ss_dssp ESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHH
T ss_pred cCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHee
Confidence 211 245678889999999999888887765555555543
No 173
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.06 E-value=1.5e-10 Score=123.01 Aligned_cols=123 Identities=20% Similarity=0.258 Sum_probs=88.1
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcc-cc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 385 (733)
.+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+...+..+ + ...++..+++++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHh
Confidence 3589999999999999999999998 99999999998887544443332211 1 113577778885 89
Q ss_pred CCCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCeEE--EecCCCCCHHHHhccc-C-CCCcEE
Q 004726 386 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKT-S-SQDRII 442 (733)
Q Consensus 386 ~~aDlVI~av--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~-~-~~~~~i 442 (733)
++||+||+++ |+++ .+++++++++.+++ +++++ +||.+.+. +.+.... . .+.|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999999 7543 45889999999998 56655 45555443 3333222 2 456777
Q ss_pred EE
Q 004726 443 GA 444 (733)
Q Consensus 443 g~ 444 (733)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 174
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.03 E-value=9.7e-10 Score=117.42 Aligned_cols=159 Identities=13% Similarity=0.022 Sum_probs=92.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
.||+|||+|.||+.+|..|+++|++|++||+++++++...+ .|... ......+ .+..+++.+.++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~-----------~g~~~-~~~~~~~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINV-----------SHTSP-YVEESKI-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------HSCBT-TBTTCCC-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-----------hCCcc-cCCCCee-eEEEeCCHHHhcCC
Confidence 48999999999999999999999999999999988765422 11000 0000000 24455565338899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHH---HhcccC--CCC-cEEEEecCCCCC--CCCeeEEec
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS--SQD-RIIGAHFFSPAH--VMPLLEIVR 460 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~--~~~-~~ig~h~~~p~~--~~~lveiv~ 460 (733)
|+||.||| .....+++.++.+ +++++++.+.++.+.+ +++.+. .+. ..+...|..+.. .+....++.
T Consensus 82 DvVil~vk--~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~ 156 (335)
T 1z82_A 82 DILVIAIP--VQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTL 156 (335)
T ss_dssp EEEEECSC--GGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CEEEEECC--HHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEE
Confidence 99999999 3445555555433 6777776665554421 221111 011 111122221111 111112222
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004726 461 TERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (733)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 489 (733)
+.. + .+.+.+++...|..+.+..|.
T Consensus 157 g~~-~---~~~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 157 AGE-N---SKELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp EET-T---HHHHHHHHCCSSEEEEEESCH
T ss_pred Eeh-h---HHHHHHHhCCCCEEEEecCch
Confidence 221 2 678899999888887776653
No 175
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.00 E-value=5.9e-10 Score=117.96 Aligned_cols=166 Identities=11% Similarity=0.009 Sum_probs=101.8
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC-----C-CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHH-HHHhhcccccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA-NNALKMLKGVL 380 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~-----G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~-~~~~~~i~~~~ 380 (733)
.+||+|||+|.||+.+|..|+++ | ++|++||+ +++++...+. .|....... ......+..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEec
Confidence 35899999999999999999999 9 99999999 7665543210 111000000 00000122234
Q ss_pred CccccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH-HHHhcccCCCCcEE-EEecCCCCCC------
Q 004726 381 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHV------ 452 (733)
Q Consensus 381 ~~~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~~~i-g~h~~~p~~~------ 452 (733)
+.+.+.++|+||.|||... ..++++++.+.++++++|++.+.++.. ..+.+.+... +++ |+.+...+..
T Consensus 77 ~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~-~v~~g~~~~~a~~~~pg~~~ 153 (317)
T 2qyt_A 77 NPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDT-VVWKGCVYISARKSAPGLIT 153 (317)
T ss_dssp CHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTT-TBCEEEEEEEEEEEETTEEE
T ss_pred CccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCC-cEEEEEEEEEEEEcCCCEEE
Confidence 4456789999999998544 367788888888888888877777766 3455555432 222 3222111111
Q ss_pred --CCeeEE-ecC--CCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 453 --MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 453 --~~lvei-v~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
.....+ +.. ...+++.+ .+.++++..|....+.++
T Consensus 154 ~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~d 193 (317)
T 2qyt_A 154 LEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTD 193 (317)
T ss_dssp EEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSC
T ss_pred EcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchH
Confidence 111112 322 33457777 899999999987766665
No 176
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.99 E-value=5.9e-10 Score=118.96 Aligned_cols=162 Identities=14% Similarity=0.060 Sum_probs=102.5
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeC--ChHHHHHHHHHHHHHHHHhHhcCC-CCHHHHHHHhhcccccc--Cc-c
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY-S 383 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~-~~~~~~~~~~~~i~~~~--~~-~ 383 (733)
||+|||+|.||.++|..|+++|++|++||+ ++++++... +.+. +... . . +..+..++ ++ +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~g-~-~-~~~~~~~~~~~~~~ 67 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-----------AGREHPRLG-V-K-LNGVEIFWPEQLEK 67 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-----------TTCCBTTTT-B-C-CCSEEEECGGGHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHH-----------HhCcCcccC-c-c-ccceEEecHHhHHH
Confidence 799999999999999999999999999999 888766532 1121 0000 0 0 01223344 44 4
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC---C---HHHHhcccCC--CCcEEEEecCCCCCC---
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAHV--- 452 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~---~---~~~l~~~~~~--~~~~ig~h~~~p~~~--- 452 (733)
.+++||+||.|+|.. ....++.++.+ ++++++|++.+.++ + ...+.+.+.. +..........|...
T Consensus 68 ~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 144 (335)
T 1txg_A 68 CLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV 144 (335)
T ss_dssp HHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH
T ss_pred HHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH
Confidence 578999999999944 56788888888 88888887766565 2 2344443332 110001111222221
Q ss_pred --CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004726 453 --MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (733)
Q Consensus 453 --~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 489 (733)
.....++.+. .+++..+.+.++++..|..+.+..|.
T Consensus 145 ~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di 182 (335)
T 1txg_A 145 AKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDI 182 (335)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCH
T ss_pred HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCch
Confidence 1111233332 36888999999999999887777664
No 177
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.97 E-value=4.9e-10 Score=117.29 Aligned_cols=118 Identities=23% Similarity=0.293 Sum_probs=81.6
Q ss_pred CCCCcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccC
Q 004726 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (733)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (733)
..++++||+|||+|.||.++|..++..|+ +|+++|++++....+.+... .. ..++..+++
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~------~~------------~~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI------FN------------LPNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH------HT------------CTTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh------hc------------CCCeEEeCC
Confidence 34556899999999999999999999999 99999999873333322110 00 025666778
Q ss_pred ccccCCCCEEEEec-------------cCChHHHHHHHHHHHHhCCCCeEE--EecCCCCCHHHHhccc----C-CCCcE
Q 004726 382 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKT----S-SQDRI 441 (733)
Q Consensus 382 ~~~l~~aDlVI~av-------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~----~-~~~~~ 441 (733)
++++++||+||+++ .++..+++++++++.+++ +++++ +||. +..+...+ . .+.|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP----~~~~t~~~~~~~~~p~~rv 146 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP----VEIMTYVTWKLSTFPANRV 146 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS----HHHHHHHHHHHHCCCGGGE
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh----HHHHHHHHHHhcCCCHHHe
Confidence 89999999999997 889999999999999998 55554 4553 33333332 2 24577
Q ss_pred EEE
Q 004726 442 IGA 444 (733)
Q Consensus 442 ig~ 444 (733)
+|+
T Consensus 147 iG~ 149 (303)
T 2i6t_A 147 IGI 149 (303)
T ss_dssp EEC
T ss_pred eCC
Confidence 775
No 178
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.96 E-value=8.2e-10 Score=116.95 Aligned_cols=157 Identities=18% Similarity=0.200 Sum_probs=102.7
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+...+. .. . ..++.. ++.+++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~----~~--~-------~~~i~~-~d~~~~~~ 67 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP----FT--R-------RANIYA-GDYADLKG 67 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG----GS--C-------CCEEEE-CCGGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh----hc--C-------CcEEEe-CCHHHhCC
Confidence 79999999999999999999999 999999999887764333222111 00 0 013333 35678899
Q ss_pred CCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCeEEE--ecCCCCCHHHHhcc-cC-CCCcEEEEecCCC
Q 004726 388 VDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEK-TS-SQDRIIGAHFFSP 449 (733)
Q Consensus 388 aDlVI~avpe~--------------~~~k~~v~~~l~~~~~~~~ii~--s~tS~~~~~~l~~~-~~-~~~~~ig~h~~~p 449 (733)
||+||++++.. ..+++++++++.++++ +++++ +|.+... +.+... .. .+.|++|+
T Consensus 68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~----- 140 (319)
T 1a5z_A 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS----- 140 (319)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC-----
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee-----
Confidence 99999999852 2467888899998874 55443 4433321 233322 22 45677775
Q ss_pred CCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchh---hhhHHHHH
Q 004726 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN---RAFFPYSQ 503 (733)
Q Consensus 450 ~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~n---Rl~~~~~~ 503 (733)
.|..++......+.+.+|..+ .+.++++.+ ..++++++
T Consensus 141 -------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G~hg~~~~p~~s 181 (319)
T 1a5z_A 141 -------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIGEHGDSEVPVWS 181 (319)
T ss_dssp -------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEBCSSTTCEECGG
T ss_pred -------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEeCCCCCcccchh
Confidence 356677777777788888544 455566665 44444433
No 179
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.94 E-value=3.6e-09 Score=112.05 Aligned_cols=172 Identities=16% Similarity=0.103 Sum_probs=111.5
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
++||+|||+|.||+.+|..|+++|++|++| ++++.++...+. ...-.+. . ......+..+++.+.+++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~------g~~~~~~-~----~~~~~~~~~~~~~~~~~~ 86 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT------GLRLETQ-S----FDEQVKVSASSDPSAVQG 86 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH------CEEEECS-S----CEEEECCEEESCGGGGTT
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC------CeEEEcC-C----CcEEEeeeeeCCHHHcCC
Confidence 468999999999999999999999999999 998887664321 0000000 0 000123445566667789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH-HHhcccCCCCcEEEEe------cCCCCCC---CCeeE
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAH------FFSPAHV---MPLLE 457 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~~~ig~h------~~~p~~~---~~lve 457 (733)
+|+||.|||. ....++++++.+.++++++|++.+.++... .+.+.+. .++++.. ...|-.. ... .
T Consensus 87 ~D~vilavk~--~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g-~ 161 (318)
T 3hwr_A 87 ADLVLFCVKS--TDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRG-E 161 (318)
T ss_dssp CSEEEECCCG--GGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEE-E
T ss_pred CCEEEEEccc--ccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCc-e
Confidence 9999999994 456788899999999999999999998874 5555554 4444321 1112111 111 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhH
Q 004726 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (733)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~ 499 (733)
++-+. .+..+.+.+++...|....+..|.-+.....++.
T Consensus 162 ~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~ 200 (318)
T 3hwr_A 162 LVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLIL 200 (318)
T ss_dssp EEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHH
T ss_pred EEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHH
Confidence 12222 2345678888888887777767765555555443
No 180
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.94 E-value=3.3e-09 Score=113.20 Aligned_cols=168 Identities=11% Similarity=0.142 Sum_probs=103.9
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
++||+|||+|.||+.+|..|+++|++|++|+++ +.++... +.|......-......+..+++.+.+++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 468999999999999999999999999999995 4444321 1221000000000012334556656789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC-------------------HH-HHhcccCCCCcEEEE-ec
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIGA-HF 446 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~-------------------~~-~l~~~~~~~~~~ig~-h~ 446 (733)
+|+||.||| .....++++++.+.++++++|++...+++ .. .+.+.++ ..++++. -+
T Consensus 71 ~D~Vilavk--~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVK--APALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCC--HHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCC--chhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 999999999 45666888888888889998888777753 11 2333332 2344432 22
Q ss_pred C-----CCCC---CCCeeEEecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 004726 447 F-----SPAH---VMPLLEIVRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (733)
Q Consensus 447 ~-----~p~~---~~~lveiv~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG 491 (733)
. .|-. .... .++-| ...+.+..+.+.+++...|.......|.-+
T Consensus 148 ~~a~~~~pg~v~~~~~g-~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~ 201 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGR-RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQR 201 (335)
T ss_dssp CCEEESSTTEEEECSCC-EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHH
T ss_pred EEEEEcCCcEEEECCCC-eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHH
Confidence 1 1111 1111 12222 223457788899999998887777677555
No 181
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.45 E-value=1.2e-10 Score=114.70 Aligned_cols=148 Identities=14% Similarity=0.161 Sum_probs=97.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
+||+|||+|.||..+|..|.+.|++|++||++++ .+.. ...| +...+..+.++++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~-----------~~~g-------------~~~~~~~~~~~~a 74 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSL-----------LPRG-------------AEVLCYSEAASRS 74 (201)
Confidence 4799999999999999999999999999999876 3221 0111 1122222567899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--------HHHhcccCCCCcEEEEecCCCCCCCC-ee---
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL--- 456 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--------~~l~~~~~~~~~~ig~h~~~p~~~~~-lv--- 456 (733)
|+||.|+|.. ....++ ++.. ..++++|++.+++++. ..+.+.+.. .+++...++.|..... ..
T Consensus 75 DvVilav~~~--~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g 149 (201)
T 2yjz_A 75 DVIVLAVHRE--HYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDA 149 (201)
Confidence 9999999943 334444 4443 3467777776666653 333333322 3455554444443322 11
Q ss_pred ---EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004726 457 ---EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (733)
Q Consensus 457 ---eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (733)
.++.+. +++..+.+.++++.+|+.++.+++
T Consensus 150 ~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 150 SRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 233443 578899999999999999999876
No 182
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.89 E-value=6.5e-09 Score=102.61 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.++..+.+.+.+.|..++.++.++.|+|. +-| +++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPG------G~v~----------------a~~~I~-~~i~~~~~pV~~~ 91 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYINSPG------GSIS----------------AGMAIY-DTMVLAPCDIATY 91 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHCSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48889999999999999877667776663 322 2211 123455 6688899999999
Q ss_pred eCCcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCCChhhh------------------hhhccccC--HHHHHHH
Q 004726 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVG--LSKAIEM 162 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P~~g~~------------------~~l~r~~G--~~~a~~l 162 (733)
+.|.|.++|..++++||. |++.+++.++.....-|. .|-. ..+.+..| .....++
T Consensus 92 v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 168 (208)
T 2cby_A 92 AMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEAD 168 (208)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred ECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999999 999999999987654221 1110 11222223 3445668
Q ss_pred HHcCCCCCHHHHHHcCCccEEcC-cchHHHHH
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~-~~~l~~~a 193 (733)
+..|..++++||+++||||++.+ .+++++..
T Consensus 169 ~~~~~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 169 SDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp HHTTCEEEHHHHHHHTSCSEECSCC-------
T ss_pred HhCCcEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 88999999999999999999985 45555433
No 183
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.84 E-value=4.9e-09 Score=110.39 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=73.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+..... ......++..+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 589999999999999999999997 999999999887642222211100 0111235666678889999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEE
Q 004726 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 388 aDlVI~av--------------pe~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
||+||+++ .++..+++++++++.+++ ++++++
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 116 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII 116 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99999997 344578888999999987 666553
No 184
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.83 E-value=2.4e-09 Score=112.23 Aligned_cols=61 Identities=21% Similarity=0.261 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHH
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 680 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~ 680 (733)
+++||+||++.++++||+++++||++ +++|||.+|..|+|+|...-|||+++|..|.+...
T Consensus 190 ~pGFi~NRl~~~~~~EA~~lv~eGva-s~edID~~~~~g~g~~~a~mGPf~~~Dl~G~~~~~ 250 (319)
T 3ado_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLS 250 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHH
T ss_pred CCCEeHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCCCCcchhhhhhhcCccHHH
Confidence 68999999999999999999999999 99999999999999871112999999999987644
No 185
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.76 E-value=4.8e-08 Score=103.06 Aligned_cols=173 Identities=12% Similarity=0.037 Sum_probs=106.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHH-HHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-ANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~-~~~~~~~i~~~~~~~~l~~ 387 (733)
+||+|||+|.||+.+|..|+++|++|++|++++ .+... +.|...... -...+..+..+++.+.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~-----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIA-----------GNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHH-----------HTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHH-----------hCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 479999999999999999999999999999986 23221 112100000 0000001233455566789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH-HHHhcccCCCCcEEEEe------cCCCC---CCCCe-e
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPA---HVMPL-L 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~~~ig~h------~~~p~---~~~~l-v 456 (733)
+|+||.||| .....++++++.+.++++++|++...++.. +.+.+.++. .++++.- ...|- +..+. +
T Consensus 70 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLK--TFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCC--GGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecC--CCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998 555668889999999999999888888864 455555432 2444332 11121 11111 1
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhh
Q 004726 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497 (733)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl 497 (733)
.+-..+..+.+..+.+.+++...|....+..|.-+.....+
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl 187 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKL 187 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHH
Confidence 12122233567778888999988877666566444333333
No 186
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.75 E-value=5e-09 Score=112.06 Aligned_cols=117 Identities=14% Similarity=-0.000 Sum_probs=81.6
Q ss_pred ceEEEEcCCcCcHHHHHHHH-HCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~-~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++|+|||+|.||.++|+.+. ..|++|++||++++..+.+.+ . .+...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------L-------------GAERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------H-------------TCEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------c-------------CcEEeCCHHHHhc
Confidence 47999999999999999999 999999999998765443211 0 12223344 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccCCC-CcEEEEecCCC
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 449 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~~-~~~ig~h~~~p 449 (733)
+||+|++++|...+.+..+.+++.+.++++++|+..+++ .....+.+.+... -...+.|+|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987766555445666778999988643333 3334566555432 22367888874
No 187
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.75 E-value=9.7e-09 Score=107.89 Aligned_cols=120 Identities=19% Similarity=0.293 Sum_probs=78.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
+||+|||+|.||.++|..|+..|+ +|+++|+++++++..... ..+.. . .. ...++.. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~--------l~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED--------IAHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--------HTTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh--------hhhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 389999999999999999999999 999999998876532111 11111 0 00 0012332 4668899
Q ss_pred CCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEE--ecCCCCCHHHHhcccCCCCcEEEE
Q 004726 387 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 444 (733)
Q Consensus 387 ~aDlVI~av--pe------------~~~~k~~v~~~l~~~~~~~~ii~--s~tS~~~~~~l~~~~~~~~~~ig~ 444 (733)
+||+||+++ |. +..+++++++++.+++ ++++++ ||.+......+.+.. .+.|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 32 4457788999999986 565543 444443322333333 56677664
No 188
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.72 E-value=4.8e-09 Score=111.47 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=80.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|..++..|++|++||+++++.+... +.| +... ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 5899999999999999999999999999999876543321 111 2222 44 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC---CHHHHhcccC-CCCcEEEEecCCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---DLNIVGEKTS-SQDRIIGAHFFSPA 450 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~---~~~~l~~~~~-~~~~~ig~h~~~p~ 450 (733)
||+||+++|...+.+..+.+++.+.++++++++ |+|+. ....+.+.+. ......++++|.|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailI-n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFI-NISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEE-ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEE-ECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 999999999776654444355667789999886 45443 3345555543 23345788887654
No 189
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.67 E-value=4.5e-08 Score=102.78 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=71.6
Q ss_pred CCCCcceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCC--hHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
|.++.+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.... .......++..++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcC
Confidence 44556799999999999999999999999 99999999 444432211111110 0111123566677
Q ss_pred CccccCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEE
Q 004726 381 DYSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 381 ~~~~l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
+++++++||+||+++.- +..+.+++.+.+.++++ +++++
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vl 124 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIV 124 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEE
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEE
Confidence 88999999999999721 33466677778888875 55544
No 190
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.66 E-value=3.9e-08 Score=103.29 Aligned_cols=110 Identities=11% Similarity=0.178 Sum_probs=76.3
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+...... . + ...++..+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~--~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-L--G---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-H--T---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-c--C---------CCeEEEECCCHHHhCCC
Confidence 69999999999999999999898 7999999998876432222111000 0 0 01245556778899999
Q ss_pred CEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcc
Q 004726 389 DMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434 (733)
Q Consensus 389 DlVI~av--------------pe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~ 434 (733)
|+||++. ..+..+++++.+++.+++ |+++++.. |.|+..+...
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~ 125 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT--TNPVDAMTYV 125 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--CSSHHHHHHH
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCchHHHHHH
Confidence 9999994 456678889999999997 55543322 3355544443
No 191
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.66 E-value=6.1e-09 Score=110.84 Aligned_cols=115 Identities=16% Similarity=0.067 Sum_probs=79.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|..++..|++|++||++++. +.+. +.| +.. +++ +.+++
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~~ 204 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLRE 204 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHhh
Confidence 58999999999999999999999999999999876 3221 011 122 234 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP 449 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~~p 449 (733)
||+||+++|...+.+.-+.+++.+.++++++++..+.+..+. .+.+.+. ..-...+.|+|++
T Consensus 205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 999999999877654433356667789999886444333333 3444443 2334477898873
No 192
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.63 E-value=9.6e-08 Score=101.15 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=102.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHh-H---hcCCCCHHHHHHHhhccccccCccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL-V---TRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~-~---~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
+||+|||+|.||+.+|..|+++|++|++|++++. +...+ . .+ + ..|.. .+..+..+++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~----~--Gl~~~~~~~g~~-------~~~~~~~~~~~~~ 67 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKA----K--GIRIRSATLGDY-------TFRPAAVVRSAAE 67 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHH----H--CEEEEETTTCCE-------EECCSCEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHh----C--CcEEeecCCCcE-------EEeeeeeECCHHH
Confidence 4899999999999999999999999999999862 32211 0 00 0 00100 0001334455544
Q ss_pred c-CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH-HHHhcccCCCCcEEEEe-c-----CCCCCC---C
Q 004726 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH-F-----FSPAHV---M 453 (733)
Q Consensus 385 l-~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~~~ig~h-~-----~~p~~~---~ 453 (733)
+ +++|+||.|||... ..++++++.+.++++++|++...++.. ..+.+.+... ++++.- + ..|-.+ .
T Consensus 68 ~~~~~DlVilavK~~~--~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~ 144 (320)
T 3i83_A 68 LETKPDCTLLCIKVVE--GADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQA 144 (320)
T ss_dssp CSSCCSEEEECCCCCT--TCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEecCCCC--hHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECC
Confidence 4 48999999998433 346788898999999988888888764 4565555432 444321 1 112111 1
Q ss_pred CeeEEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 004726 454 PLLEIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (733)
Q Consensus 454 ~lveiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pG 491 (733)
+....+ .....+.+..+.+.+++...|....+..|.-+
T Consensus 145 ~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~ 183 (320)
T 3i83_A 145 YGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITT 183 (320)
T ss_dssp EEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHH
T ss_pred CCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHH
Confidence 111112 11233456788888999988877766666443
No 193
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.62 E-value=1.6e-07 Score=98.96 Aligned_cols=98 Identities=18% Similarity=0.156 Sum_probs=68.4
Q ss_pred eEEEEcCCcCcHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 310 KVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
||+|||+|.||.++|..|+.. |++|+++|+++++++.....+..... ......++..+++++.+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~~l~~ 69 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP------------VGLFDTKVTGSNDYADTAN 69 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCEEEEESCGGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh------------cccCCcEEEECCCHHHHCC
Confidence 799999999999999999985 79999999999877743211111000 0001134666677877999
Q ss_pred CCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCeEE
Q 004726 388 VDMVIEAVIES--------------VPLKQKIFSELEKACPPHCIL 419 (733)
Q Consensus 388 aDlVI~avpe~--------------~~~k~~v~~~l~~~~~~~~ii 419 (733)
||+||+++|.. ..+.+++.+.+.+++++..++
T Consensus 70 aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~vi 115 (310)
T 1guz_A 70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (310)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 99999999632 245567777888886444433
No 194
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.61 E-value=1.4e-08 Score=107.91 Aligned_cols=112 Identities=19% Similarity=0.143 Sum_probs=77.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|..+...|++|++||++++. +.+.+ .| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-----------~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-----------LK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-----------cC-------------ceec-CHHHHHhh
Confidence 47999999999999999999999999999999875 32210 01 1222 34 45789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC-HH--HHhcccCC-CCcEEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-LN--IVGEKTSS-QDRIIGAHFFS 448 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~-~~--~l~~~~~~-~~~~ig~h~~~ 448 (733)
||+|++++|...+.+..+-+++.+.++++ +++ |+|... +. .+.+.+.. .....|.|+|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ili-n~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLV-NIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEE-ECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEE-ECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999987665544444556678888 765 455433 22 34444432 33568899887
No 195
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.61 E-value=7.3e-08 Score=101.53 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=72.4
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
+++||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+..... ... ....+..+++++++
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~-----------~~~~v~~t~d~~a~ 73 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSP-VDG-----------FDAKFTGANDYAAI 73 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHT-----------CCCCEEEESSGGGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhh-hcC-----------CCCEEEEeCCHHHH
Confidence 45799999999999999999999999 999999999887643222222111 000 01245556788999
Q ss_pred CCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 386 ~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
++||+||.++.- +..+.+++.+++.+++ ++++++.
T Consensus 74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iiv 122 (324)
T 3gvi_A 74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVIC 122 (324)
T ss_dssp TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEe
Confidence 999999999731 3455666777788887 5555543
No 196
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.61 E-value=7.3e-09 Score=109.77 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=78.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+ | ....+++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 4799999999999999999999999999999875321 1 1123344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS 448 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~-~~~~~ig~h~~~ 448 (733)
||+|++++|...+.+.-+-++..+.++++++++..+++..+ ..+.+.+. ...+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999976655443334455667889988644443332 35555554 334667888876
No 197
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.61 E-value=1.1e-07 Score=100.18 Aligned_cols=97 Identities=20% Similarity=0.247 Sum_probs=69.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCC--CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc-ccCcccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 385 (733)
+||+|||+|.||.++|..|+++| ++|+++|+++++++.....+..... ..+ ..+.. +++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~~ 67 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAAL 67 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHHh
Confidence 58999999999999999999999 7999999999887664332211100 000 11222 3566889
Q ss_pred CCCCEEEEeccCCh------------------HHHHHHHHHHHHhCCCCeEEE
Q 004726 386 KDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 386 ~~aDlVI~avpe~~------------------~~k~~v~~~l~~~~~~~~ii~ 420 (733)
++||+||++++... .+++++.+++.++++ +++++
T Consensus 68 ~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii 119 (309)
T 1hyh_A 68 ADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLV 119 (309)
T ss_dssp TTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEE
T ss_pred CCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEE
Confidence 99999999998533 246788888888775 55544
No 198
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.60 E-value=6.6e-08 Score=101.91 Aligned_cols=103 Identities=17% Similarity=0.318 Sum_probs=71.9
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
|+++||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+..... .......+..++++++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~------------~~~~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP------------IEGVDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh------------hcCCCcEEEEcCCHHH
Confidence 345799999999999999999999998 999999999886533222211100 0000123555667899
Q ss_pred cCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 385 l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+++||+||.+..- +..+.+++.+.+.+++ |+++++.
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~viv 120 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVIC 120 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEE
Confidence 9999999999631 3456677778888888 5555443
No 199
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.59 E-value=4.7e-08 Score=102.71 Aligned_cols=100 Identities=19% Similarity=0.253 Sum_probs=74.9
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.... ... ...++..++++++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~----~~~---------~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGS----LFL---------HTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHG----GGS---------CCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhh----hcc---------cCCeEEEcCCHHH
Confidence 46799999999999999999999997 99999999988765433332211 000 1235666788888
Q ss_pred cCCCCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEE
Q 004726 385 FKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 385 l~~aDlVI~av--------------pe~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
+++||+||++. ..+..+++++.+++.+++ |+++++
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~il 135 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKE 135 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEE
Confidence 99999999875 345678888889999995 555444
No 200
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.58 E-value=2.8e-07 Score=101.19 Aligned_cols=201 Identities=17% Similarity=0.194 Sum_probs=150.3
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC---C-----------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEcCCCcccCCCC
Q 004726 3 APRVTMEVG-NDGVAIITLINPP---V-----------NALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGNGGRFSGGFD 66 (733)
Q Consensus 3 ~~~v~~~~~-~~~i~~i~l~~p~---~-----------Nal~~~~~~~l~~~l~~~~-~d~~v~~vvl~g~g~~F~aG~D 66 (733)
|..+....+ ..+++.++...|. . +.+...|..||.+++-.+. +++++...++...|+.
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 455555553 4568899987762 1 4455678899977776665 6788999999777643
Q ss_pred chhhh-------hccCCCcccccchhHHHHHHHHHhcCCCcEEEEe-CCcccchh-hHHhhhcCEEEEeC-------Cce
Q 004726 67 INVFQ-------KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (733)
Q Consensus 67 l~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav-~G~a~GgG-~~lalacD~ria~~-------~a~ 130 (733)
.... ...+..-..+...+..+.+ .+|.....-++|.| +|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 2221 1111112234445566666 67888889999999 79998886 49999999999972 488
Q ss_pred EeCccccCCCCCChhhhhhhcccc-CHHHHHHH--HHcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccCchh
Q 004726 131 LGLPELTLGVIPGFGGTQRLPRLV-GLSKAIEM--MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207 (733)
Q Consensus 131 f~~pe~~~Gl~P~~g~~~~l~r~~-G~~~a~~l--~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~ 207 (733)
+.+.+.++|.+|..-+..+|.++. |.....+. ...|+++++++|.++|||+...++-|.+++++-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 999999999999988888887765 44333332 346999999999999999999999999999999999999999988
Q ss_pred hhhh
Q 004726 208 IRSL 211 (733)
Q Consensus 208 ~~~~ 211 (733)
+..+
T Consensus 497 ~~~~ 500 (556)
T 2w3p_A 497 LTGL 500 (556)
T ss_dssp HHHH
T ss_pred hccc
Confidence 7654
No 201
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.57 E-value=2.7e-07 Score=97.62 Aligned_cols=106 Identities=26% Similarity=0.334 Sum_probs=72.4
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
++||+|||+|.||..+|..|+.+|+ +|+++|+++++++.....+...+ .-.+ ...+..+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~---~~~~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS---SFYP----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG---GGST----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh---hhcC----------CeEEEeCCCHHHh
Confidence 3589999999999999999999999 99999999877652111111110 0000 0234444466788
Q ss_pred CCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004726 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTID 427 (733)
Q Consensus 386 ~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (733)
++||+||.++.. +..+.+++++++.++ .++++|++.+.++.
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVD 128 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchH
Confidence 999999999931 235667888888887 56777765444443
No 202
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.54 E-value=8.8e-08 Score=104.88 Aligned_cols=107 Identities=16% Similarity=0.117 Sum_probs=74.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHH-CCCeeEEEe---CChHHHHHHHHHHHHHHHHhHhcCC-CC---H-HHHHHHhhccc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRGK-LT---Q-DKANNALKMLK-G 378 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~-~G~~V~~~d---~~~e~~~~~~~~i~~~l~~~~~~g~-~~---~-~~~~~~~~~i~-~ 378 (733)
+||+|||+|.||.++|..|++ +|++|++|| ++++.++.+.+ +.|. +. . .+......++. .
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~ 72 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKDGTQTEVKSRPKVI 72 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSSSCEEEEEECCSEE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCCCccceeeccceEE
Confidence 589999999999999999988 599999999 77776655311 1110 00 0 00000011233 4
Q ss_pred ccCc-cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004726 379 VLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (733)
Q Consensus 379 ~~~~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (733)
++++ +++++||+||+|||. ....++++++.+.++++++|++++++..
T Consensus 73 ~~~~~~a~~~aD~Vilav~~--~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 73 TKDPEIAISGADVVILTVPA--FAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp ESCHHHHHTTCSEEEECSCG--GGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred eCCHHHHhCCCCEEEEeCch--HHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 5565 567899999999994 4467899999999999999988655554
No 203
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.53 E-value=1.6e-07 Score=100.88 Aligned_cols=103 Identities=16% Similarity=0.090 Sum_probs=71.9
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcc-ccccCc-ccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~~l 385 (733)
++||+|||+|.||..+|..|+++|++|++||+++++++...+.. ...+.....+ ....+ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT----SEEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC----CeEEeccccc------cccccceecCCHHHHH
Confidence 35899999999999999999999999999999998876643210 0000000000 00112 234455 457
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (733)
+++|+||+|+|.... .++++++.+.++++++|++.
T Consensus 74 ~~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIHH--ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEES
T ss_pred hcCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEc
Confidence 899999999995543 67888899989999877665
No 204
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.52 E-value=2.9e-08 Score=102.83 Aligned_cols=124 Identities=10% Similarity=-0.026 Sum_probs=84.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+. ....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 58999999999999999999999999999998754211 1223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--CHHHHhcccC-CCCcEEEEecC-----CCCCCCCeeEEe
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS-SQDRIIGAHFF-----SPAHVMPLLEIV 459 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~-~~~~~ig~h~~-----~p~~~~~lveiv 459 (733)
||+|+.++|...+...-+-++..+.++++++++..+++- ....+.+.+. ..-...+...| +|.+..+.+-++
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 999999999766655444466777889999886444332 2334444443 23344555544 344455566677
Q ss_pred cC
Q 004726 460 RT 461 (733)
Q Consensus 460 ~~ 461 (733)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 76
No 205
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.50 E-value=3.8e-07 Score=100.66 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=55.9
Q ss_pred ceEEEEcCCcCc--HHHHHHHHHC----CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGLMG--SGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~mG--~~iA~~l~~~----G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
.||+|||+|.|| .++|..|+.. |++|++||+++++++.+....... ...... ..++..++|+
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~----l~~~~~--------~~~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKY----VEEVGA--------DLKFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHH----HHHTTC--------CCEEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHH----hccCCC--------CcEEEEECCH
Confidence 589999999975 5557788754 899999999999988754433222 211111 1367778887
Q ss_pred -cccCCCCEEEEecc
Q 004726 383 -SEFKDVDMVIEAVI 396 (733)
Q Consensus 383 -~~l~~aDlVI~avp 396 (733)
+++++||+||++++
T Consensus 72 ~eal~dAD~VIiaag 86 (480)
T 1obb_A 72 DDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 78999999999995
No 206
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.50 E-value=1.3e-07 Score=99.75 Aligned_cols=112 Identities=19% Similarity=0.248 Sum_probs=73.2
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
+++||+|||+|.||.++|..++..|. +|+++|++++.++.....+.. . .. ... ..-++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~---~-~~--~~~------~~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH---G-KV--FAP------KPVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH---H-TT--SSS------SCCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH---H-hh--hcC------CCeEEE-cCcHHH
Confidence 35699999999999999999998885 899999998855432111111 0 00 000 001222 245688
Q ss_pred cCCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcc
Q 004726 385 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434 (733)
Q Consensus 385 l~~aDlVI~avp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~ 434 (733)
+++||+||++++ ++..+++++.+++.++++ +++++.. +-|+..+...
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv~--tNPv~~~~~~ 132 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGF-QGLFLVA--TNPVDILTYA 132 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTC-CSEEEEC--SSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCC-CCEEEEe--CCchHHHHHH
Confidence 999999999953 344788999999999975 4433322 3355544443
No 207
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.49 E-value=4.2e-08 Score=110.85 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=95.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||+++|..+...|++|++||++... +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHhc
Confidence 58999999999999999999999999999998742 2211 111 1112 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHH--HhcccCCC-C-----cEEEEecC--CCCCCCCeeE
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQ-D-----RIIGAHFF--SPAHVMPLLE 457 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~--l~~~~~~~-~-----~~ig~h~~--~p~~~~~lve 457 (733)
||+|+.|+|...+...-+-+++.+.++++++++..+.+..+.+ +.+.+... - .+++.||. +|.+..+.+-
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 9999999996644433332346677899998876555544443 33443221 1 13333432 1223335566
Q ss_pred EecCCC-CCHHHHHH-----HHHHHHHcCCee
Q 004726 458 IVRTER-TSAQVILD-----LMTVGKIIKKVP 483 (733)
Q Consensus 458 iv~~~~-t~~e~~~~-----~~~l~~~lG~~~ 483 (733)
++|+.. +++++.+. +.++.+.++..+
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888776 67887775 666777776544
No 208
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.48 E-value=1.5e-07 Score=99.31 Aligned_cols=140 Identities=11% Similarity=0.060 Sum_probs=85.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeC-ChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~-~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++|+|||+|.||.++|+.+...|++|++||+ +++.. .+. +.| +...+++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 5899999999999999999999999999999 87652 211 111 1223234 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccCC-CCcEEEEecC--CC-----CCCCCee
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFF--SP-----AHVMPLL 456 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~-~~~~ig~h~~--~p-----~~~~~lv 456 (733)
+||+|+.++|...+...-+-++..+.++++++++..+++ +....+.+.+.. .-.-.+..+| .| .+..+.+
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nv 281 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNT 281 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTE
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCE
Confidence 999999999976654332224456778999988755544 233344444432 1122334444 22 2233446
Q ss_pred EEecCCCC-CHHHHHHHH
Q 004726 457 EIVRTERT-SAQVILDLM 473 (733)
Q Consensus 457 eiv~~~~t-~~e~~~~~~ 473 (733)
-++|+... +.++.+.+.
T Consensus 282 iltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 282 FLFPHIGSAATQAREDMA 299 (320)
T ss_dssp EECSSCTTCBHHHHHHHH
T ss_pred EECCcCCcCcHHHHHHHH
Confidence 66675443 444444443
No 209
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.40 E-value=8.2e-07 Score=92.27 Aligned_cols=107 Identities=17% Similarity=0.284 Sum_probs=71.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
||+|||+|.||.++|..|+..|+ +|++||++++.++.....+......+ + ....+..+++++++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~---~---------~~~~i~~t~d~~a~~~ 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLKG 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT---T---------CCCEEEEESCGGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc---C---------CCCEEEEeCCHHHhCC
Confidence 79999999999999999999998 99999999988763222221111100 0 0124565667889999
Q ss_pred CCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHH
Q 004726 388 VDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (733)
Q Consensus 388 aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (733)
||+||.+..- +..+.+.+.+++.+++ |+++++..| -|+..+
T Consensus 70 aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs--NPvd~~ 124 (294)
T 1oju_A 70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT--NPMDVM 124 (294)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS--SSHHHH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC--CcchHH
Confidence 9999999732 2244555566777775 555554333 344433
No 210
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.38 E-value=8.1e-07 Score=94.03 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=65.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++... ......++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----------------------------~~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSGV-----------------------------DWIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTTS-----------------------------CCEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccccc-----------------------------CceecCCHHHHHhc
Confidence 5899999999999999999999999999999875310 01122344 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccCC-CCcEEEEecC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFF 447 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~-~~~~ig~h~~ 447 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+. .+.+.+.. .-...++..|
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf 285 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVF 285 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCC
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCc
Confidence 999999999777766555567777889999886444443332 33343332 2234455544
No 211
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.37 E-value=1.9e-07 Score=98.34 Aligned_cols=127 Identities=10% Similarity=0.057 Sum_probs=83.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 589999999999999999999999999999987542210 011112233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEEecCC--C------CCCCCee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS--P------AHVMPLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~-~~~~~ig~h~~~--p------~~~~~lv 456 (733)
||+|+.++|...+...-+-++..+.++++++++..+.+ +....+.+.+. ..-...+...|. | .+..+.|
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 271 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDV 271 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSE
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCE
Confidence 99999999977766554446677788999988643333 33345555443 223344554442 2 2233456
Q ss_pred EEecC
Q 004726 457 EIVRT 461 (733)
Q Consensus 457 eiv~~ 461 (733)
-++|+
T Consensus 272 ilTPH 276 (324)
T 3evt_A 272 LITPH 276 (324)
T ss_dssp EECCS
T ss_pred EEcCc
Confidence 66664
No 212
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.37 E-value=5e-07 Score=94.76 Aligned_cols=138 Identities=16% Similarity=0.085 Sum_probs=84.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++. +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKFV-DLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------cccc-CHHHHHhh
Confidence 48999999999999999999999999999999875 2211 111 1112 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEEecCC--CC------CCCCee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS--PA------HVMPLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~-~~~~~ig~h~~~--p~------~~~~lv 456 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+ ..+.+.+. ..-.-.+..+|. |. +..+.+
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 276 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNV 276 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCE
Confidence 99999999976654332224455678999988654444222 24444432 222334444433 21 233445
Q ss_pred EEecCCCC-CHHHHHHH
Q 004726 457 EIVRTERT-SAQVILDL 472 (733)
Q Consensus 457 eiv~~~~t-~~e~~~~~ 472 (733)
-++|+... +.+..+.+
T Consensus 277 iltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 277 VLTPHIGASTVEAQERA 293 (307)
T ss_dssp EECSSCTTCBHHHHHHH
T ss_pred EECCccccCcHHHHHHH
Confidence 56665433 44444333
No 213
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.36 E-value=3.2e-07 Score=97.66 Aligned_cols=103 Identities=11% Similarity=0.062 Sum_probs=71.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||+++...+.+.+ . .+...+++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------T-------------GAKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------H-------------CCEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------C-------------CCeEcCCHHHHHhc
Confidence 48999999999999999999999999999998644333211 0 12233344 66899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ +....+.+.+
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 270 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAV 270 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHH
Confidence 99999999976665444445666778999988643333 2333444444
No 214
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.36 E-value=1.2e-06 Score=91.98 Aligned_cols=116 Identities=18% Similarity=0.060 Sum_probs=74.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
+||+|||+|.||+.+|..|+ +|++|++|+++++.++...+ .|......-......+ ..+.+.+.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~-----------~G~~~~~~~~~~~~~~--~~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQS-----------EGIRLYKGGEEFRADC--SADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHH-----------HCEEEEETTEEEEECC--EEESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHh-----------CCceEecCCCeecccc--cccccccCCC
Confidence 48999999999999999999 99999999999987665422 1110000000000001 1112456789
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH-HHhcccCCCCcEEE
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIG 443 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~~~ig 443 (733)
|+||.||+ .....++++++.+. .+++ |++...++... .+.+.++. .++++
T Consensus 69 D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~-~~vl~ 119 (307)
T 3ego_A 69 DLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVG-HSIYV 119 (307)
T ss_dssp SEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCS-CEEEE
T ss_pred CEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCC-CcEEE
Confidence 99999998 55566777777654 6677 77778888775 44444332 34443
No 215
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.32 E-value=8e-08 Score=103.23 Aligned_cols=110 Identities=22% Similarity=0.145 Sum_probs=79.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--------eeEEEeCChHHHHH-HHHHHHHHHHHhHhcC-CCCHHHHHHHhhcccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEANVRGLVTRG-KLTQDKANNALKMLKG 378 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--------~V~~~d~~~e~~~~-~~~~i~~~l~~~~~~g-~~~~~~~~~~~~~i~~ 378 (733)
.||+|||+|.||.++|..|+++|+ +|++|.++++...+ ..+.| ....++. .+..- .....+.+
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~i----n~~~~N~~YLpgv---~Lp~~i~~ 107 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEII----NTRHQNVKYLPGI---TLPDNLVA 107 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHH----TTTCCBTTTBTTC---CCCSSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHH----HhcCcCcccCCCC---cCCCCcEE
Confidence 489999999999999999999875 59999998763211 11111 1111111 01100 01145777
Q ss_pred ccCc-cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004726 379 VLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (733)
Q Consensus 379 ~~~~-~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (733)
++|+ +++++||+||.+|| .+..+.+++++.+++++++++++.+.++.
T Consensus 108 t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 108 NPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp ESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred eCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 8887 67899999999999 88899999999999999998888887764
No 216
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.31 E-value=2.1e-06 Score=84.75 Aligned_cols=136 Identities=13% Similarity=0.097 Sum_probs=93.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.++..+.+.+.+.|..++.++. +.|+|. +-| +++. ....++ +.|..+++||++.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPG------Gsv~----------------a~~~I~-~~i~~~~~pV~t~ 102 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYINSPG------GSIN----------------EGLAIL-DIFNYIKSDIQTI 102 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 4788889999999998876655 666663 333 2221 122455 6688899999999
Q ss_pred eCCcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCC---Chhh----hh--------hhccc--cCHHHHHHHHHc
Q 004726 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GFGG----TQ--------RLPRL--VGLSKAIEMMLL 165 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P---~~g~----~~--------~l~r~--~G~~~a~~l~lt 165 (733)
+.|.|..+|.-++++||. |++.+++.+++.....|... +... .. .+.+. .......+++-.
T Consensus 103 v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~ 182 (215)
T 2f6i_A 103 SFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDR 182 (215)
T ss_dssp EEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHT
T ss_pred EeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhC
Confidence 999999999999999999 99999999987665332110 0000 00 00111 133444455555
Q ss_pred CCCCCHHHHHHcCCccEEcCc
Q 004726 166 SKSITSEEGWKLGLIDAVVTS 186 (733)
Q Consensus 166 G~~i~a~eA~~~Glv~~vv~~ 186 (733)
+..++++||+++||||+|.+.
T Consensus 183 ~~~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 183 DYYMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp TCEECHHHHHHHTSCSEECCC
T ss_pred CeecCHHHHHHCCCCCEecCC
Confidence 667799999999999999854
No 217
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.31 E-value=8.5e-07 Score=94.51 Aligned_cols=139 Identities=9% Similarity=0.039 Sum_probs=86.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++... +.+ .+.| +...+++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcC-------------ceEeCCHHHHHhh
Confidence 58999999999999999999999999999998632 211 1111 2333344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEEecCC--------CCCCCCee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS--------PAHVMPLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~-~~~~~ig~h~~~--------p~~~~~lv 456 (733)
||+|+.++|-..+.+.-+-++..+.++++++++..+.+ +....+.+.+. ..-...++..|. |.+..+.+
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 295 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENC 295 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTE
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCE
Confidence 99999999977665544445667778999988643333 22234444432 222334444332 22333456
Q ss_pred EEecCCC-CCHHHHHHH
Q 004726 457 EIVRTER-TSAQVILDL 472 (733)
Q Consensus 457 eiv~~~~-t~~e~~~~~ 472 (733)
-++|+-. .+.++.+.+
T Consensus 296 ilTPHia~~t~e~~~~~ 312 (352)
T 3gg9_A 296 ICTPHIGYVERESYEMY 312 (352)
T ss_dssp EECCSCTTCBHHHHHHH
T ss_pred EECCCCCCCCHHHHHHH
Confidence 6666533 344544433
No 218
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.31 E-value=6.7e-07 Score=93.49 Aligned_cols=133 Identities=11% Similarity=0.013 Sum_probs=85.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++ +. + .....++ +.+++
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 5899999999999999999999999999999865 10 0 0112233 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEEecC---CCC------CCCCe
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF---SPA------HVMPL 455 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~~~ig~h~~---~p~------~~~~l 455 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+. .+.+.+. ..-.-.+...| .|. +..+.
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~n 254 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPN 254 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTT
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCC
Confidence 999999999766544333345667889999886444432222 3444432 22334566655 332 22345
Q ss_pred eEEecCCCC---CHHHHHH
Q 004726 456 LEIVRTERT---SAQVILD 471 (733)
Q Consensus 456 veiv~~~~t---~~e~~~~ 471 (733)
+-++|+... +.++.+.
T Consensus 255 viltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 255 VVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp EEECCSCSSSSSCHHHHHH
T ss_pred EEECCCcCCCCCCHHHHHH
Confidence 667776442 4555443
No 219
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.30 E-value=7.2e-07 Score=94.61 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=71.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||+++...+.. ......+++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--------------------------EGAIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--------------------------TTCEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--------------------------cCCeEeCCHHHHHhh
Confidence 589999999999999999999999999999986432221 012223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+ +....+.+.+
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 277 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEAL 277 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999977665544445666778999988643333 3333444444
No 220
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.29 E-value=3.2e-06 Score=82.51 Aligned_cols=135 Identities=21% Similarity=0.253 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.+++.+.+.+...|..++.++..+.|+| .+-|+ ++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v~----------------~~~~I~-~~i~~~~~~V~t~ 91 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGG------SVT----------------AGFAIY-DTIQHIKPDVQTI 91 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCC------CHH----------------HHHHHH-HHHHHhcCCcEEE
Confidence 4899999999999999987766676665 33332 221 122455 6688899999999
Q ss_pred eCCcccchhhHHhhhcC--EEEEeCCceEeCccccCCCCCChhhhh------------------hhccc--cCHHHHHHH
Q 004726 105 VEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRL--VGLSKAIEM 162 (733)
Q Consensus 105 v~G~a~GgG~~lalacD--~ria~~~a~f~~pe~~~Gl~P~~g~~~------------------~l~r~--~G~~~a~~l 162 (733)
+.|.|.++|.-++++|| .|++.++++|......-|. .|-.. .+.+. .......++
T Consensus 92 ~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~ 168 (203)
T 3qwd_A 92 CIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA---QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKD 168 (203)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSST---TTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999 6999999999886553221 11110 01111 133445566
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCcc
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTSE 187 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~~ 187 (733)
+-....++|+||++.||||+|++..
T Consensus 169 ~~~d~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 169 TDRDNFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp HTSCCCEEHHHHHHHTSCSEECCCC
T ss_pred hhcCceecHHHHHHcCCcCEecCCc
Confidence 6677889999999999999999654
No 221
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.28 E-value=2.2e-07 Score=97.76 Aligned_cols=101 Identities=13% Similarity=0.110 Sum_probs=69.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++... +. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~~-~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AE-----------KIN-------------AKAV-SLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HH-----------hcC-------------ceec-CHHHHHhh
Confidence 5899999999999999999999999999999987532 11 111 1112 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~ 435 (733)
||+|+.++|...+...-+-++..+.++++++++..+++-.+ ..+.+.+
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL 246 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYI 246 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHH
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHH
Confidence 99999999966653322224455678899988754444322 2444444
No 222
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.27 E-value=2.7e-06 Score=94.02 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=55.6
Q ss_pred ceEEEEcCCcC-cHHHHHHHHHC-----CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
.||+|||+|.+ |.++|..|++. +.+|++||+++++++...+.....+.. .+ ....+..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~---~~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE---KA---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH---HC---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhcc---CC---------CCCEEEEECCH
Confidence 48999999998 55678788887 678999999999887753222211111 11 11357777787
Q ss_pred -cccCCCCEEEEeccC
Q 004726 383 -SEFKDVDMVIEAVIE 397 (733)
Q Consensus 383 -~~l~~aDlVI~avpe 397 (733)
+++++||+||.++|-
T Consensus 97 ~eal~~AD~VViaag~ 112 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRV 112 (472)
T ss_dssp HHHHSSCSEEEECCCT
T ss_pred HHHHcCCCEEEEcCCC
Confidence 789999999999974
No 223
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.27 E-value=1.6e-06 Score=90.91 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=66.1
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+...... .... ..+..+++++++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-~~~~-----------~~v~~~~~~~a~~~ 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-HGFD-----------TRVTGTNDYGPTED 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-HTCC-----------CEEEEESSSGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-cCCC-----------cEEEECCCHHHhCC
Confidence 79999999999999999999987 9999999998765432222211000 0000 12443567799999
Q ss_pred CCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 388 VDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 388 aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
||+||.+..- +..+.+.+.+.+.+++ |+++++.
T Consensus 70 aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~viv 116 (314)
T 3nep_X 70 SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIV 116 (314)
T ss_dssp CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEE
T ss_pred CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEe
Confidence 9999999742 2234455556677776 4555543
No 224
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.27 E-value=9.2e-07 Score=96.86 Aligned_cols=72 Identities=21% Similarity=0.241 Sum_probs=55.3
Q ss_pred ceEEEEcCCcC--cHHHHHHHHH----CCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~m--G~~iA~~l~~----~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
.||+|||+|.| |.+++..++. .| +|++||++++++++... +.+ .... ...+++.|+|+
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~~----~l~~----------~~~~I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IGN----HSGN----------GRWRYEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HHT----TSTT----------SCEEEEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HHH----HHhc----------cCCeEEEECCH
Confidence 59999999998 5799998886 57 99999999998877532 111 1111 22467888888
Q ss_pred -cccCCCCEEEEecc
Q 004726 383 -SEFKDVDMVIEAVI 396 (733)
Q Consensus 383 -~~l~~aDlVI~avp 396 (733)
+++++||+||++++
T Consensus 70 ~eAl~dADfVI~air 84 (450)
T 3fef_A 70 KKALSAADIVIISIL 84 (450)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhcCCCEEEeccc
Confidence 68999999999995
No 225
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.27 E-value=9.7e-07 Score=95.49 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=82.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|..+...|++|++||+++.... +......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----------------------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----------------------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----------------------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----------------------------cCcEecCCHHHHHhh
Confidence 5899999999999999999999999999998743110 011223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccCCCC-cEEEEecC------------CCCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQD-RIIGAHFF------------SPAHV 452 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~~~-~~ig~h~~------------~p~~~ 452 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+.+ +....+.+.+.... .-.++.-| +|.+.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~ 288 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQG 288 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTT
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhc
Confidence 99999999977765544445666778999988644433 33345555543221 22333322 22234
Q ss_pred CCeeEEecCC-CCCHHHHH
Q 004726 453 MPLLEIVRTE-RTSAQVIL 470 (733)
Q Consensus 453 ~~lveiv~~~-~t~~e~~~ 470 (733)
.+-+-++|+- ..+.++.+
T Consensus 289 ~~nvilTPHig~~T~ea~~ 307 (416)
T 3k5p_A 289 LENVILTPHIGGSTEEAQE 307 (416)
T ss_dssp CTTEEECCSCTTCCHHHHH
T ss_pred CCCEEECCCCCCCCHHHHH
Confidence 4557777762 33455443
No 226
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.25 E-value=2e-06 Score=90.57 Aligned_cols=101 Identities=27% Similarity=0.335 Sum_probs=68.2
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccc-cccCc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~~ 382 (733)
++.+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+..... ... ..+. .++++
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~-------------~~v~i~~~~~ 68 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAP-------------QPVKTSYGTY 68 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSS-------------SCCEEEEECG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-ccc-------------CCeEEEeCcH
Confidence 345799999999999999999999997 999999999887653322221100 000 0112 24567
Q ss_pred cccCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 383 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 383 ~~l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+++++||+||.++.- +..+.+++.+.+.++++ +++++.
T Consensus 69 ~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlv 120 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLV 120 (326)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEE
T ss_pred HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence 899999999999832 12344555667777765 555543
No 227
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.24 E-value=1.7e-06 Score=84.30 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=94.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.++..+.+.+.+.|..++.++..+.|+|. +-| +++. ....++ +.|..+++||++.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPG------G~v~----------------a~~~I~-~~i~~~~~pV~~~ 90 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------GVIT----------------AGMSIY-DTMQFIKPDVSTI 90 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48889999999999999877667777773 333 2221 122455 6688899999999
Q ss_pred eCCcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCCChhhh-h-----------------hhcccc--CHHHHHHH
Q 004726 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRLV--GLSKAIEM 162 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P~~g~~-~-----------------~l~r~~--G~~~a~~l 162 (733)
+.|.|..+|.-++++||. |++.+++.++.....-|. .|-. . .+.+.. ......++
T Consensus 91 v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 167 (193)
T 1yg6_A 91 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 167 (193)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999 999999998875543221 1110 0 011111 23344444
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCc
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~ 186 (733)
+-.+..++++||+++||||++.++
T Consensus 168 ~~~~~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 168 TERDRFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp TSSCEEEEHHHHHHHTSSSEECCC
T ss_pred hcCCeEEcHHHHHHcCCCCEecCC
Confidence 445667799999999999999864
No 228
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.24 E-value=2.6e-07 Score=97.15 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=80.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 589999999999999999999999999999987432110 011112333 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--CHHHHhcccCC-CCcEEEEecC--------CCCCCCCee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSS-QDRIIGAHFF--------SPAHVMPLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~~-~~~~ig~h~~--------~p~~~~~lv 456 (733)
||+|+.++|...+...-+-.+..+.++++++++..+.+- .-..+.+.+.. .-...+...| +|.+..+.|
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nv 274 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNL 274 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTE
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCE
Confidence 999999999666544444345556788999886433332 23344444432 2233444433 222344567
Q ss_pred EEecC
Q 004726 457 EIVRT 461 (733)
Q Consensus 457 eiv~~ 461 (733)
-++|+
T Consensus 275 ilTPH 279 (324)
T 3hg7_A 275 IITPH 279 (324)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 67775
No 229
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.23 E-value=8.1e-08 Score=100.43 Aligned_cols=162 Identities=12% Similarity=0.027 Sum_probs=100.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc-CC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l-~~ 387 (733)
+||+|||+|.||+.+|..|+++|++|++|+++++.++.. ...|... ..+. .+..+.+ ++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~-----------~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYY-----------TVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEE-----------SSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEE-----------ecCCeec--------ccee-cCchHhcCCC
Confidence 479999999999999999999999999999997543210 0112100 0111 1223444 88
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEE------ecCCCCCCC-CeeEEec
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA------HFFSPAHVM-PLLEIVR 460 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~------h~~~p~~~~-~lveiv~ 460 (733)
+|+||.||| .....++++++.+.++++++|++...++...+. +. ..++++. ....|-... ..-.+..
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 566778888999999899988888888776554 22 2233332 111221110 0011111
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcchhhhhH
Q 004726 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (733)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~pGfi~nRl~~ 499 (733)
+ +.+..+.+.+++..-|-...+..|.-+.....++.
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~ 172 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLV 172 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHH
Confidence 1 34556777777777776666666655444444433
No 230
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.23 E-value=8e-07 Score=95.81 Aligned_cols=104 Identities=10% Similarity=-0.026 Sum_probs=70.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+... +.| +....++ +.+++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 4799999999999999999999999999999865433211 001 2222233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~ 436 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+-.+ ..+.+.+.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 99999999966655333224566778999988654443322 24555543
No 231
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.23 E-value=1.1e-06 Score=92.70 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=62.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchHHHHHHhCHHHHHHHHHH-------HHHHhC
Q 004726 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK-------WSQLYG 691 (733)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~egv~~~~~~iD~~~~~g~gfp~~~gGp~~~~d~~G~d~~~~~~~~-------~~~~~~ 691 (733)
.++|++||++.++++||++++++|++ ++++||.++..|+|+|..--|||+++|..| +.+.+.+++ +++.+|
T Consensus 190 ~~Gfi~Nrll~a~~~EA~~l~~~g~~-~~~~id~a~~~g~g~~~a~~GP~~~~dl~g-~g~~~~~~~~~~~~~~~~~~~~ 267 (319)
T 2dpo_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNA-EGMLSYSDRYSEGMKRVLKSFG 267 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTT-TSHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCchHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCccccCHHHHHHhcC-chHHHHHHHHhHHHHHHHHHcC
Confidence 46789999999999999999999998 899999999999998711129999999996 444444443 444556
Q ss_pred C--CCCCCHHHHHHH
Q 004726 692 N--FFKPSRFLEERA 704 (733)
Q Consensus 692 ~--~~~p~~~l~~~~ 704 (733)
+ .|.+ ++++++.
T Consensus 268 ~~~~~~~-~~~~~~~ 281 (319)
T 2dpo_A 268 SIPEFSG-ATVEKVN 281 (319)
T ss_dssp CCCCCCH-HHHHHHH
T ss_pred CCCCCCH-HHHHHHH
Confidence 4 3432 4444444
No 232
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.23 E-value=1.2e-06 Score=92.29 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=70.4
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (733)
.+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+... .... ....+..+++++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~----~~~~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHG----SLFL---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHT----GGGC---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhh----hhcc---------CCCeEEEcCCHH
Confidence 345799999999999999999999998 8999999988766533322211 0000 012344567888
Q ss_pred ccCCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCeEEE
Q 004726 384 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 384 ~l~~aDlVI~avp--------------e~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
++++||+||.+.. .+..+.+++.+.+.++++ +++++
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vl 133 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLL 133 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEE
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEE
Confidence 9999999998862 133566667777888864 55544
No 233
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.22 E-value=2.1e-06 Score=91.68 Aligned_cols=138 Identities=9% Similarity=0.047 Sum_probs=85.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|||||+|.||.++|+.+...|++|++||++... +.+ .+.| +.. .++ +.+++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g-------------~~~-~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENG-------------VEP-ASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTT-------------CEE-CCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcC-------------eee-CCHHHHHhc
Confidence 58999999999999999999999999999998532 111 0111 121 233 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC---CCHHHHhcccCCCCcEEEEecCC--C------CCCCCee
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTSSQDRIIGAHFFS--P------AHVMPLL 456 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~---~~~~~l~~~~~~~~~~ig~h~~~--p------~~~~~lv 456 (733)
||+|+.++|-..+...-+-++..+.++++++++ |++. +.-..+.+.+....-..++.-|. | .+..+.|
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nv 309 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFI-LLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGF 309 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEE-ECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEE-ECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCE
Confidence 999999999777765555566777899999886 4543 33335555443222114444332 2 2334556
Q ss_pred EEecCCC-CCHHHHHHHH
Q 004726 457 EIVRTER-TSAQVILDLM 473 (733)
Q Consensus 457 eiv~~~~-t~~e~~~~~~ 473 (733)
-++|+-. .+.++.+.+.
T Consensus 310 ilTPHia~~t~e~~~~~~ 327 (365)
T 4hy3_A 310 IRSAHRAGALDSAFKKMG 327 (365)
T ss_dssp EECCSCSSCCHHHHHHHH
T ss_pred EECCccccCHHHHHHHHH
Confidence 6777533 3455544443
No 234
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.20 E-value=8.1e-07 Score=96.46 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=69.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|||||+|.||..+|..+...|++|++||++++.. . +.+....++ +.+++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~------------~~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------L------------GNATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------C------------TTCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------c------------CCceecCCHHHHHhc
Confidence 489999999999999999999999999999975320 0 112223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~ 435 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+ ..+.+.+
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL 247 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADAL 247 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHH
Confidence 99999999977665544335566778999988644333322 3444444
No 235
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.18 E-value=3.6e-07 Score=95.95 Aligned_cols=101 Identities=12% Similarity=0.072 Sum_probs=69.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 479999999999999999999999999999987642210 000001223 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+ +.-..+.+.+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 99999999977665544435667788999988643333 3333444444
No 236
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.17 E-value=1.3e-06 Score=91.75 Aligned_cols=131 Identities=15% Similarity=0.088 Sum_probs=82.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++..+ +. ..++ +.+++
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 5899999999999999999999999999999875321 11 1223 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH--HHHhcccCCCCcEEEEecCC--C------CCCCCeeE
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS--P------AHVMPLLE 457 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~~~~~ig~h~~~--p------~~~~~lve 457 (733)
||+|+.++|...+...-+-++..+.++++++++..+++-.+ ..+.+.+...-.-.+...|. | .+..+.+-
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~~L~~~~nvi 273 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGHPLYALPNAV 273 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTSGGGGCTTEE
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCChhhhCCCEE
Confidence 99999999976554332223455678999988654443322 24555554222224455443 2 12334566
Q ss_pred EecCCCC-CHHHHH
Q 004726 458 IVRTERT-SAQVIL 470 (733)
Q Consensus 458 iv~~~~t-~~e~~~ 470 (733)
++|+... +.++.+
T Consensus 274 ltPh~~~~t~~~~~ 287 (311)
T 2cuk_A 274 ITPHIGSAGRTTRE 287 (311)
T ss_dssp ECCSCTTCBHHHHH
T ss_pred ECCcCCCCCHHHHH
Confidence 6775443 344433
No 237
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.16 E-value=1e-06 Score=93.22 Aligned_cols=101 Identities=9% Similarity=0.016 Sum_probs=70.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++.. .+ .+.| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-----------~~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-----------ASFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-----------HHTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-----------hhcC-------------cee-CCHHHHHhc
Confidence 489999999999999999999999999999987642 21 1111 111 133 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH--HHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~ 435 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+. .+.+.+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999776544433345667789999886544443333 444444
No 238
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.16 E-value=5.6e-06 Score=84.14 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=94.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.++..+.+.+...|..++.++..+.|+|. +-|+ ++. ....++ +.|...++||++.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGG------sV~----------------ag~aIy-d~I~~~k~pV~t~ 146 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGG------VVT----------------AGLAIY-DTMQYILNPICTW 146 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSCSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48888999999999988765556777763 3332 221 122455 6688889999999
Q ss_pred eCCcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCCChhhh-h-----------------hhccc--cCHHHHHHH
Q 004726 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRL--VGLSKAIEM 162 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P~~g~~-~-----------------~l~r~--~G~~~a~~l 162 (733)
+.|.|..+|.-++++||. |++.+++.++.....-|. .|-. . .+.+. .......++
T Consensus 147 v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~ 223 (277)
T 1tg6_A 147 CVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESA 223 (277)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999 999999999876543222 1111 0 01111 123344455
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCc
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~ 186 (733)
+-.+..++|+||+++||||+|...
T Consensus 224 ~drd~~lta~EAle~GLID~I~~~ 247 (277)
T 1tg6_A 224 MERDRYMSPMEAQEFGILDKVLVH 247 (277)
T ss_dssp HSSCEEECHHHHHHHTSCSEECSS
T ss_pred HhcCcccCHHHHHHCCCCCEecCc
Confidence 555677899999999999999854
No 239
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.15 E-value=7.4e-07 Score=94.38 Aligned_cols=100 Identities=19% Similarity=0.140 Sum_probs=71.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++.... +.| +...+ + +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~~-l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYTS-LDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEECC-HHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceecC-HHHHHhh
Confidence 58999999999999999999999999999998765321 011 12122 3 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+ +....+.+.+
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 244 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAY 244 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHH
Confidence 99999999976665555545667788999988643333 3333555544
No 240
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.13 E-value=4.4e-07 Score=96.00 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=71.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||+++...+.+.+ .| +... ++ +.+++
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------LG-------------LRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------cC-------------ceeC-CHHHHHhh
Confidence 58999999999999999999999999999998743322211 01 1222 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+ +....+.+.+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999976665544445677788999988644433 2333444444
No 241
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.07 E-value=1.3e-06 Score=92.87 Aligned_cols=102 Identities=14% Similarity=0.031 Sum_probs=68.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|++|++||++++... . . ..| +....++ +.+++
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-E-R----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-H-H----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-H-h----------hcC-------------CeecCCHHHHHhc
Confidence 4799999999999999999999999999999765311 0 0 001 1222234 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--HHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~ 435 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+++-. ...+.+.+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 9999999996655433333555667899998865444432 33444444
No 242
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.06 E-value=2.1e-05 Score=82.79 Aligned_cols=109 Identities=20% Similarity=0.275 Sum_probs=70.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
.||+|||+|.+|.+++..|+..|+ +|+++|+++++++.....+.... ...... -.+.. +++++++
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~-----------~~v~~-~~~~a~~ 73 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTT-----------VRVKA-GEYSDCH 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSC-----------CEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCC-----------eEEEe-CCHHHhC
Confidence 589999999999999999999885 89999999887764222222110 000000 02222 4568899
Q ss_pred CCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhc
Q 004726 387 DVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433 (733)
Q Consensus 387 ~aDlVI~avpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~ 433 (733)
+||+||.+++- ++ .+.+++.+++.+++ ++++++. .|.|+..+..
T Consensus 74 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~t~ 131 (317)
T 3d0o_A 74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV--ATNPVDILAY 131 (317)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE--CSSSHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHH
Confidence 99999999842 22 45566667777776 5555543 2456554443
No 243
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.05 E-value=1.2e-06 Score=93.92 Aligned_cols=103 Identities=16% Similarity=0.065 Sum_probs=70.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCe-eEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++|+|||+|.||.++|+.+...|++ |++||++++..+.+. +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 4799999999999999999999997 999999875433221 111 2222344 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
+||+|+.++|...+...-+-++..+.++++++++..+.+ +....+.+.+
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL 271 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAAL 271 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHH
Confidence 999999999976554443334566778999988644443 2333444444
No 244
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.04 E-value=2.1e-06 Score=91.02 Aligned_cols=100 Identities=14% Similarity=0.042 Sum_probs=69.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++.. . +. .+...+++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~------------------------~~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EK------------------------KGYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HH------------------------TTCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hh------------------------hCeecCCHHHHHhh
Confidence 589999999999999999999999999999987653 1 00 01112233 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+++ +....+.+.+
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL 249 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGL 249 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHH
Confidence 99999999977664432224455678899988654443 2333454444
No 245
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.04 E-value=1.9e-05 Score=72.48 Aligned_cols=103 Identities=14% Similarity=0.033 Sum_probs=64.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCC-HHHHHHHhhccccccCccccC
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l~ 386 (733)
+++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.+.- ...-.|-.+ ++.... ..+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~-----~~~~~gd~~~~~~l~~-----------~~~~ 69 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG-----FDAVIADPTDESFYRS-----------LDLE 69 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT-----CEEEECCTTCHHHHHH-----------SCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC-----CcEEECCCCCHHHHHh-----------CCcc
Confidence 46899999999999999999999999999999999877643210 000011111 110000 1257
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (733)
++|+||.+++ +.+....+...+.... ...+++...+....
T Consensus 70 ~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~ 109 (141)
T 3llv_A 70 GVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKK 109 (141)
T ss_dssp TCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGH
T ss_pred cCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHH
Confidence 8999999998 4444444444444444 55566655444333
No 246
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.03 E-value=9.4e-07 Score=93.67 Aligned_cols=110 Identities=17% Similarity=0.112 Sum_probs=73.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++.. .+. ..... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTT-------------TCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhc-------------ccccc-CHHHHHhc
Confidence 589999999999999999999999999999987531 000 11222 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEEec
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHF 446 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~-~~~~~ig~h~ 446 (733)
||+|+.++|-..+...-+-++..+.++++++++..+.+ +....+.+.+. ..-...++.-
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV 262 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDT 262 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESC
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecc
Confidence 99999999976665544445666778999988643333 33334444443 2223345543
No 247
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.03 E-value=1.2e-05 Score=83.28 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=67.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
+||+|||+|.+|.++|..|+.++. +++++|++++.++.-...+..... .. + ....+..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~--~---------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GI--D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GG--T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cC--C---------CCCeEecCCCHHHhC
Confidence 389999999999999999998875 899999998765532222211100 00 0 001344567789999
Q ss_pred CCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 387 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 387 ~aDlVI~avp--------------e~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+||+||.+.- .+..+.+++.+++.++++.. +++.
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~a-ivlv 116 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPES-KILV 116 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTC-EEEE
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCce-EEEE
Confidence 9999998872 14556666777788777554 4443
No 248
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.02 E-value=4.1e-06 Score=88.10 Aligned_cols=88 Identities=11% Similarity=0.117 Sum_probs=63.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
++|+|||+|.||..++..|++. |+ +|++||+++++.++..+.+ +. .+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~~-----------~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------QG-----------EVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------SS-----------CCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------hC-----------CeEEeCCHHHHH
Confidence 4799999999999999999886 76 8999999999877643210 10 13334455 567
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
++||+||.|+|.. ..++.. +.++++++|++.+
T Consensus 195 ~~aDiVi~atp~~----~~v~~~--~~l~~g~~vi~~g 226 (312)
T 2i99_A 195 AGADVIITVTLAT----EPILFG--EWVKPGAHINAVG 226 (312)
T ss_dssp TTCSEEEECCCCS----SCCBCG--GGSCTTCEEEECC
T ss_pred hcCCEEEEEeCCC----CcccCH--HHcCCCcEEEeCC
Confidence 8999999999853 233322 4678888876643
No 249
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.00 E-value=4.3e-05 Score=69.54 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=60.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCC-CHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
++|.|+|+|.||..+|..|.+.|++|+++|++++.++...+.. ....-.+.. +.+... ...+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~-----------~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLE-----------DAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHH-----------HTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHH-----------HcCccc
Confidence 4799999999999999999999999999999998766532100 000000100 000000 023678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+|+||.++|.+ .. ...+..+.+.++++.+++.
T Consensus 70 ~d~vi~~~~~~-~~-~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 70 ADMYIAVTGKE-EV-NLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp CSEEEECCSCH-HH-HHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEeeCCc-hH-HHHHHHHHHHcCCCEEEEE
Confidence 99999999854 22 2333445555666677654
No 250
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=97.99 E-value=7.8e-06 Score=79.66 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.+++.+.+.+...|..++.++..+.|+|. +-| +++. ....++ +.|..+++||++.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpG------G~v~----------------~~~~I~-~~i~~~~~~v~t~ 94 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG------GMVT----------------AGMGVY-DTMQFIKPDVSTI 94 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC------CCHH----------------HHHHHH-HHHHHhCCCeEEE
Confidence 48899999999999999876666766663 333 2221 122455 6688899999999
Q ss_pred eCCcccchhhHHhhhcCE--EEEeCCceEeCccccCCCCCChhhhh----------h--------hcccc--CHHHHHHH
Q 004726 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ----------R--------LPRLV--GLSKAIEM 162 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~P~~g~~~----------~--------l~r~~--G~~~a~~l 162 (733)
+.|.|.++|.-++++||. |++.+++.+......-|. .|-.. . +.+.- ......++
T Consensus 95 ~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~ 171 (201)
T 3p2l_A 95 CIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKD 171 (201)
T ss_dssp EEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EcCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999998 999999998776553221 11110 0 01111 23344445
Q ss_pred HHcCCCCCHHHHHHcCCccEEcCc-chH
Q 004726 163 MLLSKSITSEEGWKLGLIDAVVTS-EEL 189 (733)
Q Consensus 163 ~ltG~~i~a~eA~~~Glv~~vv~~-~~l 189 (733)
+-....++|+||++.||||+|++. ++|
T Consensus 172 ~~~~~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 172 TDRDNFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp TSSCEEEEHHHHHHHTSCSEECCCSCC-
T ss_pred hhcCeeecHHHHHHcCCccEecCCHHHh
Confidence 555566799999999999999854 444
No 251
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.98 E-value=6.2e-06 Score=86.85 Aligned_cols=108 Identities=22% Similarity=0.315 Sum_probs=67.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCC-CCHHHHHHHhhccccccCccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~ 384 (733)
..||+|||+|.+|.++|..++..|+ +|+++|+++++++..... +.+.. .. .--.+.. +++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d--------l~~~~~~~------~~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD--------INHGLPFM------GQMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH--------HTTSCCCT------TCEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH--------HHHhHHhc------CCeEEEE-CCHHH
Confidence 3589999999999999999999998 999999998776532111 11110 00 0012332 45688
Q ss_pred cCCCCEEEEeccCCh--------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhc
Q 004726 385 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433 (733)
Q Consensus 385 l~~aDlVI~avpe~~--------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~ 433 (733)
+++||+||.+++-.. .+.+++.+.+.+++ ++++++. .|.|+..+..
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~~~ 131 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV--VSNPVDIITY 131 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE--CSSSHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHH
Confidence 999999999986322 22456667788886 5555543 2556554443
No 252
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.97 E-value=9.6e-06 Score=85.91 Aligned_cols=95 Identities=15% Similarity=0.213 Sum_probs=68.8
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
.+||+|||+ |.+|.++|..++..|. +|+++|+++++++.....+... ... ..++.+++++ +
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~--------~~~-------~~~i~~t~d~~~ 72 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC--------GFE-------GLNLTFTSDIKE 72 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH--------CCT-------TCCCEEESCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC--------cCC-------CCceEEcCCHHH
Confidence 469999998 9999999999999985 8999999998766433222211 010 1246666676 6
Q ss_pred ccCCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCe
Q 004726 384 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 417 (733)
Q Consensus 384 ~l~~aDlVI~avp--------------e~~~~k~~v~~~l~~~~~~~~ 417 (733)
++++||+||.++. .+..+.+.+.+.+.++++...
T Consensus 73 al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 73 ALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 7999999999862 234566677778888886554
No 253
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.95 E-value=2.5e-05 Score=85.84 Aligned_cols=76 Identities=21% Similarity=0.140 Sum_probs=54.6
Q ss_pred ceEEEEcCCcC-cHHHHHHHHHC-----CCeeEEEeCCh--HHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
.||+|||+|.+ |.+++..|++. +.+|++||+++ ++++.........+. ..+. ...+..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~---~~~~---------~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE---KAGV---------PIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHH---HTTC---------CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHh---hcCC---------CcEEEEeC
Confidence 58999999998 77888888874 56899999999 887764322211111 1110 12466677
Q ss_pred Cc-cccCCCCEEEEecc
Q 004726 381 DY-SEFKDVDMVIEAVI 396 (733)
Q Consensus 381 ~~-~~l~~aDlVI~avp 396 (733)
|+ +++++||+||.+++
T Consensus 76 D~~eal~gAD~VVitag 92 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFR 92 (450)
T ss_dssp CHHHHHTTCSEEEECCC
T ss_pred CHHHHhCCCCEEEEcCC
Confidence 87 78999999999998
No 254
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.93 E-value=1.3e-05 Score=84.38 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=66.1
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc-ccCcc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYS 383 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~ 383 (733)
..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.... . .+..+.. +.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~----~-----------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL----P-----------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh----h-----------hcCCcEEEECcHH
Confidence 34689999999999999999999988 89999999987765332221110 0 0112222 44568
Q ss_pred ccCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 384 ~l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
++++||+||.+..- +..+.+++.+.+.++++ +++++.
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilv 123 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLV 123 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEE
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEE
Confidence 99999999998731 23345566667777765 555543
No 255
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.93 E-value=4.9e-05 Score=85.50 Aligned_cols=159 Identities=15% Similarity=0.062 Sum_probs=106.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++++...+.+..+++.+... .+-+|.|.- |.|+.+.+-...... ...+.....++ ..+....+|+|++
T Consensus 118 gGs~g~~~~~Ki~r~~e~A~~~-~lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~~~~--~~ls~~giP~Isv 187 (587)
T 1pix_A 118 AGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPFFRN--AELNQLGIPVIVG 187 (587)
T ss_dssp TTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEe-----CCCCCccccchhccc--cccHHHHHHHH--HHHhCCCCCEEEE
Confidence 4788999999999999988865 456777764 445666543221110 01122222232 3477889999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeC-CceEeCccccCCCCCChhhhhhhccccCHHHHHHHH-HcCCCCCHHH-------HH
Q 004726 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM-LLSKSITSEE-------GW 175 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~-~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~-ltG~~i~a~e-------A~ 175 (733)
|.|.|.|||... ..||++|+++ ++.+++.-.. ++- ...---.++..+|.+++ .||+.+++++ +.
T Consensus 188 v~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~----~~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~ 260 (587)
T 1pix_A 188 IYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMG----GMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYT 260 (587)
T ss_dssp ECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCC----SCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTT
T ss_pred EecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHh----hhccccccchhHHHHHHHHhCCccChhhcccHHHHHh
Confidence 999999999999 9999999886 4888872211 000 00001127899999999 9999988765 23
Q ss_pred HcCCccEEcCcchHHHHHHHHHHHHHcc
Q 004726 176 KLGLIDAVVTSEELLKVSRLWALDIAAR 203 (733)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~~a~~ 203 (733)
+.|++|.+++.++ .+.+.++++...
T Consensus 261 ~~GvvD~vv~~e~---~a~~~~r~~ls~ 285 (587)
T 1pix_A 261 ETGFMREVYASEE---GVLEGIKKYVGM 285 (587)
T ss_dssp TSCCSCEEESSHH---HHHHHHHHHHHT
T ss_pred hcCceeEecCCHH---HHHHHHHHHHHh
Confidence 6999999998765 444555555443
No 256
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.92 E-value=1.7e-06 Score=92.50 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=72.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|||||+|.||+++|+.+...|++|++||++.+..+ . ... ..++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~----------------~------------~~~-~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG----------------D------------EGD-FRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT----------------C------------CSC-BCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc----------------c------------Ccc-cCCHHHHHhh
Confidence 4799999999999999999999999999997543210 0 111 2233 56789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCeEEEecCCC---CCHHHHhcccCC-CCcEEEEecCC
Q 004726 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTSS-QDRIIGAHFFS 448 (733)
Q Consensus 388 aDlVI~avpe~~~----~k~~v~~~l~~~~~~~~ii~s~tS~---~~~~~l~~~~~~-~~~~ig~h~~~ 448 (733)
||+|+.++|-..+ ...-+-++..+.++++++++ |+|. +.-..+.+.+.. .-...++..|.
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailI-N~aRG~vvde~aL~~aL~~g~i~gA~LDV~e 238 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILI-NACRGPVVDNAALLARLNAGQPLSVVLDVWE 238 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEE-ECCCCcccCHHHHHHHHHhCCCeEEEeeccc
Confidence 9999999996655 43333345666789999886 4553 233355554432 33445555443
No 257
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.86 E-value=3e-06 Score=89.86 Aligned_cols=100 Identities=16% Similarity=0.071 Sum_probs=69.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|++|++||++++.. + + ...... ++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~------------------------~~~~~~-~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-H------------------------PDFDYV-SLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-C------------------------TTCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-H------------------------hccccC-CHHHHHhc
Confidence 479999999999999999999999999999986531 0 0 001112 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhcccC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~ 436 (733)
||+|+.++|...+...-+-++..+.++++++++..+++ +....+.+.+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999977765443334566778999988644443 23335555443
No 258
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.86 E-value=2.8e-06 Score=91.04 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=67.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|+.+...|++|++||++++.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 479999999999999999999999999999865421 001 11 1233 55789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCeEEEecCCCC--CHHHHhcccC
Q 004726 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (733)
Q Consensus 388 aDlVI~avpe~~~----~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~ 436 (733)
||+|+.++|-..+ ...-+-++..+.++++++++..+.+- ....+.+.+.
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999996655 33322245667789999886433332 2234555443
No 259
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.85 E-value=3.6e-05 Score=80.97 Aligned_cols=106 Identities=21% Similarity=0.207 Sum_probs=69.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc-ccCcccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 385 (733)
.||+|||+|.+|.+++..++..++ +|+++|+++++++.....+... .. ....+.. ..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~----~~-----------~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA----QA-----------FTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG----GG-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHH----HH-----------hcCCeEEEECCHHHh
Confidence 589999999999999999999887 8999999998877432222111 00 0011222 2456889
Q ss_pred CCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh
Q 004726 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (733)
Q Consensus 386 ~~aDlVI~avpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (733)
++||+||.+++- ++ .+.+++.+.+.+++ |+++++.. +.|+..+.
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t 128 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA--ANPVDILT 128 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe--CCcHHHHH
Confidence 999999999842 11 45566667777776 45544432 44554443
No 260
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.84 E-value=3.6e-05 Score=81.18 Aligned_cols=106 Identities=19% Similarity=0.235 Sum_probs=69.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC--eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc-ccCcccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 385 (733)
.||+|||+|.+|.+++..++..++ +|+++|+++++++.....+... .. ....+.. ..+++++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~----~~-----------~~~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNA----LP-----------FTSPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT----GG-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHH----HH-----------hcCCeEEEECCHHHh
Confidence 589999999999999999998886 8999999998876532222110 00 0012222 2456889
Q ss_pred CCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh
Q 004726 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (733)
Q Consensus 386 ~~aDlVI~avpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (733)
++||+||.+++- ++ .+.+++.+.+.++++ +++++.. +.|+..+.
T Consensus 75 ~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~--tNPv~~~t 132 (326)
T 2zqz_A 75 KDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA--ANPVDILT 132 (326)
T ss_dssp GGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEC--SSSHHHHH
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEe--CCcHHHHH
Confidence 999999999842 22 455566677788874 5544432 45554443
No 261
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.83 E-value=6.5e-06 Score=76.08 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..++..|...|++|+++|+++++++...+.+ + ..+...++. +.+++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------C-----------CceEeecCHHHHhcC
Confidence 4799999999999999999999999999999999876542211 0 011122333 55788
Q ss_pred CCEEEEeccCC
Q 004726 388 VDMVIEAVIES 398 (733)
Q Consensus 388 aDlVI~avpe~ 398 (733)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 262
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.82 E-value=4e-05 Score=80.31 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=69.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCC--CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (733)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+... .... . --.+.. +++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~----~~~~--~-------~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA----TPFA--H-------PVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT----GGGS--C-------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh----Hhhc--C-------CeEEEE-CCHHHhC
Confidence 38999999999999999999987 58999999988776422222110 0000 0 012332 4578899
Q ss_pred CCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh
Q 004726 387 DVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (733)
Q Consensus 387 ~aDlVI~avpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (733)
+||+||.+++- + ..+.+++.+.+.++++. ++++.. |.|+..+.
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~--tNPv~~~t 123 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPE-AVLLVA--TNPVDVMT 123 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEC--SSSHHHHH
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEEe--cCchHHHH
Confidence 99999998742 2 44566666778888654 544432 44554433
No 263
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.74 E-value=3.9e-06 Score=88.95 Aligned_cols=99 Identities=16% Similarity=0.053 Sum_probs=67.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|++|++||++++.. . + ..+... ++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~------------------------~~~~~~-~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-E------------------------DYCTQV-SLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-T------------------------TTCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-H------------------------hccccC-CHHHHHhh
Confidence 589999999999999999999999999999986531 0 0 001111 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CCHHHHhccc
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~ 435 (733)
||+|+.++|...+.+.-+-++..+.++++++++..+.+ +....+.+.+
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL 248 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAV 248 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHH
Confidence 99999999976554333324556678999988643333 2333444444
No 264
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.74 E-value=0.00011 Score=70.62 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=35.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~~~d~~~e~~~~~ 347 (733)
++|.|+|+|.||..+|..|.+. |++|+++|+++++++.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 4799999999999999999999 99999999999887654
No 265
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.74 E-value=4.7e-05 Score=67.04 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=36.4
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC-CeeEEEeCChHHHHHH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKG 347 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~ 347 (733)
+++|.|+|+|.||..++..|.+.| ++|+++|+++++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 468999999999999999999999 9999999999887654
No 266
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.74 E-value=5.2e-05 Score=69.41 Aligned_cols=86 Identities=19% Similarity=0.152 Sum_probs=60.0
Q ss_pred cceEEEEcC----CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
-++|+|||+ |.||..++..|.+.|++|+.+|++.+.+ ..+....++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 368999999 9999999999999999866666553211 123334445
Q ss_pred cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC
Q 004726 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (733)
+....+|++|.++| .+...+++.++.+ .....++. .+++.
T Consensus 65 el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~-~~~~~ 104 (138)
T 1y81_A 65 ELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWF-QPGAE 104 (138)
T ss_dssp GSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEE-CTTSC
T ss_pred HhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEE-cCccH
Confidence 44467999999999 5666777777665 44455554 44554
No 267
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.74 E-value=0.00015 Score=66.43 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=59.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+. ....-.|-.+..+... ...+.++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l~----------~a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-----GVRAVLGNAANEEIMQ----------LAHLECA 72 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHHH----------HTTGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHHH----------hcCcccC
Confidence 479999999999999999999999999999999987764320 0000011111100000 0135789
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEE
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
|+||.++|++..... +...+....+.-.|++
T Consensus 73 d~vi~~~~~~~~n~~-~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGE-IVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHH-HHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHH-HHHHHHHHCCCCeEEE
Confidence 999999996654432 2233333334444554
No 268
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.67 E-value=0.00014 Score=70.53 Aligned_cols=141 Identities=14% Similarity=0.125 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE--EEcCCCc----ccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCc
Q 004726 27 ALAIPIVAGLKDKFEEATSRDDVKAIV--LTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (733)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vv--l~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp 100 (733)
.++.++...+...|..++.++..+-|. |.+.|.. ...-+|+ .....++ +.+...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 489999999999999887544333333 3444411 0000111 1233566 668889999
Q ss_pred EEEEeCCcccchhhHHhhhcC--EEEEeCCceEeCccccCCCCCChhhhh------------------hhcccc--CHHH
Q 004726 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLV--GLSK 158 (733)
Q Consensus 101 ~Iaav~G~a~GgG~~lalacD--~ria~~~a~f~~pe~~~Gl~P~~g~~~------------------~l~r~~--G~~~ 158 (733)
|...+-|.|.+.|.-|++++| .|++.+++++-+-...-|.. .|.+. .+.+.- ....
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~--~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~ 176 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIP--FNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNV 176 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCC--SSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCccccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999 59999999998765543331 11110 011111 2233
Q ss_pred HHHHHHcCCCCCHHHHHHcCCccEEcCc
Q 004726 159 AIEMMLLSKSITSEEGWKLGLIDAVVTS 186 (733)
Q Consensus 159 a~~l~ltG~~i~a~eA~~~Glv~~vv~~ 186 (733)
..+++-....++|+||++.||||+|++.
T Consensus 177 I~~~m~rd~~msa~EA~eyGlID~V~~~ 204 (205)
T 4gm2_A 177 ISNVLERDKYFNADEAVDFKLIDHILEK 204 (205)
T ss_dssp HHHHTTSCEEEEHHHHHHTTSCSEECCC
T ss_pred HHHHhcCCcccCHHHHHHcCCccEeecC
Confidence 3445556677899999999999999865
No 269
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.62 E-value=0.00013 Score=66.68 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=35.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
+++|.|+|+|.+|..++..|.+.|++|+++|++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 457999999999999999999999999999999877654
No 270
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.62 E-value=6e-05 Score=78.69 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=59.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|++|+++|+++++.+... +.|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC----------eEEc-hhhHHHHhhC
Confidence 5899999999999999999999999999999987654421 1110 0001 1223 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
||+||.++|...-- ++..+.++++++++.
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin 244 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILD 244 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEE
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEE
Confidence 99999999953211 123345677777654
No 271
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.62 E-value=0.00013 Score=68.11 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
++|.|+|+|.+|..+|..|.+.|++|+++|+++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 58999999999999999999999999999999987654
No 272
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.61 E-value=7.2e-05 Score=77.84 Aligned_cols=86 Identities=22% Similarity=0.296 Sum_probs=59.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|.+|+++|+++++.+.+. +.|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC----------eecC-hhhHHHHhcC
Confidence 5899999999999999999999999999999987654321 1110 0000 1223 45789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+|+||.++|...-- ++..+.++++.+++.
T Consensus 214 aDvVi~~~p~~~i~-----~~~l~~mk~~~~lin 242 (293)
T 3d4o_A 214 VDVCINTIPALVVT-----ANVLAEMPSHTFVID 242 (293)
T ss_dssp CSEEEECCSSCCBC-----HHHHHHSCTTCEEEE
T ss_pred CCEEEECCChHHhC-----HHHHHhcCCCCEEEE
Confidence 99999999953321 122345677877754
No 273
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.59 E-value=3.8e-05 Score=79.17 Aligned_cols=67 Identities=16% Similarity=0.162 Sum_probs=51.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||.++|..|++.|++|+++|+++++++...+. .| +...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~----------~g-------------~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK----------FP-------------LEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT----------SC-------------EEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----------cC-------------CeeehhHHhhhcC
Confidence 479999999999999999999999999999999876553110 01 2223244 56789
Q ss_pred CCEEEEeccCC
Q 004726 388 VDMVIEAVIES 398 (733)
Q Consensus 388 aDlVI~avpe~ 398 (733)
+|+||.|+|..
T Consensus 187 aDiVi~atp~~ 197 (275)
T 2hk9_A 187 VQVIVNTTSVG 197 (275)
T ss_dssp CSEEEECSSTT
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 274
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.59 E-value=0.00026 Score=80.82 Aligned_cols=144 Identities=17% Similarity=0.093 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEcCCCcccCC-CCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEeCCccc
Q 004726 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (733)
Q Consensus 32 ~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav~G~a~ 110 (733)
...++.+.|+.+++|+.++.|+|.=. |-| +++..... ..+.+ ..+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~~-------------I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQY-------------IGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHHH-------------HHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHHH-------------HHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 46788999999999999999999632 112 34332211 22333 3455567999999876 66
Q ss_pred chhhHHhhhcCEEEEeCCceEeCccccC------------CCCC---------Chhhhh-----------hhc-------
Q 004726 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP---------GFGGTQ-----------RLP------- 151 (733)
Q Consensus 111 GgG~~lalacD~ria~~~a~f~~pe~~~------------Gl~P---------~~g~~~-----------~l~------- 151 (733)
-+|.-|+.+||.+++.+.+.++...+.. |+-+ ..+-.+ .+.
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999998866642 2210 000000 000
Q ss_pred ----------cccCHHHHHHHHHc-------CCCCCHHHHHHcCCccEEcCcchHHHHHH
Q 004726 152 ----------RLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSR 194 (733)
Q Consensus 152 ----------r~~G~~~a~~l~lt-------G~~i~a~eA~~~Glv~~vv~~~~l~~~a~ 194 (733)
|-+......+++-. +..++|++|++.||||++...+++.+...
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~ 271 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALT 271 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 11122222233333 79999999999999999997666655443
No 275
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.56 E-value=7.5e-05 Score=69.01 Aligned_cols=101 Identities=12% Similarity=0.019 Sum_probs=64.4
Q ss_pred ceEEEEcC----CcCcHHHHHHHHHCCCeeEEEeCCh--HHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~l~~~G~~V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
++|+|||+ |.||..++..|.+.|++|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 47999999 8999999999999999977777654 211 123334444
Q ss_pred -cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhccc-CCCCcEEE
Q 004726 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIG 443 (733)
Q Consensus 383 -~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~-~~~~~~ig 443 (733)
+....+|+||.++| .+...+++.++.+ .....+++. +++.. .++.+.. ....+++|
T Consensus 65 ~el~~~~Dlvii~vp--~~~v~~v~~~~~~-~g~~~i~i~-~~~~~-~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRN--SEAAWGVAQEAIA-IGAKTLWLQ-LGVIN-EQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSC--STHHHHHHHHHHH-HTCCEEECC-TTCCC-HHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEEc-CChHH-HHHHHHHHHcCCEEEc
Confidence 33467999999999 3555666666655 344555543 45553 3444333 23344543
No 276
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.44 E-value=0.00031 Score=73.31 Aligned_cols=106 Identities=18% Similarity=0.284 Sum_probs=66.0
Q ss_pred eEEEEc-CCcCcHHHHHHHHHCCC--eeEEEeC--ChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 310 KVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 310 kI~VIG-~G~mG~~iA~~l~~~G~--~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
||+|+| +|.+|.+++..|+..|+ +++++|+ ++++++.....+... ...+. --.+.. +++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~----~~~~~---------~~~v~~-~~~~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG----IAYDS---------NTRVRQ-GGYED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHH----HTTTC---------CCEEEE-CCGGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHH----HhhCC---------CcEEEe-CCHHH
Confidence 799999 99999999999999886 7999999 877654321111111 00000 001222 34678
Q ss_pred cCCCCEEEEecc--CCh------------HHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh
Q 004726 385 FKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (733)
Q Consensus 385 l~~aDlVI~avp--e~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (733)
+++||+||.+.. ..+ .+.+.+.+.+.++.+ +.++.. +|.|+..+.
T Consensus 68 ~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv--~SNPv~~~~ 126 (303)
T 1o6z_A 68 TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLT--TSNPVDLLN 126 (303)
T ss_dssp GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEE--CCSSHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE--eCChHHHHH
Confidence 999999999874 211 355666667777654 555443 345554433
No 277
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.43 E-value=0.00025 Score=74.79 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=65.3
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHCC--CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc---ccCc
Q 004726 309 RKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 382 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 382 (733)
+||+|+| +|.+|.+++..|+..| ++|+++|++++. ..+.+ +...... ..+.. ++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~d---------L~~~~~~--------~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTAD---------ISHMDTG--------AVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHHH---------HHTSCSS--------CEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHHH---------hhccccc--------ceEEEEeCCCCH
Confidence 5899999 7999999999999999 799999998861 11110 1111000 12222 3355
Q ss_pred -cccCCCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCeEEEecCCCCCHHH
Q 004726 383 -SEFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (733)
Q Consensus 383 -~~l~~aDlVI~avpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (733)
+++++||+||.+++- . ..+.+.+.+.+.++.+ +.++.. +|.|+..
T Consensus 71 ~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv--~SNPv~~ 130 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNL--ISNPVNS 130 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEE--CCSSHHH
T ss_pred HHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE--ECCchHH
Confidence 678999999999842 1 1556667777777774 444433 2455554
No 278
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.43 E-value=0.00045 Score=72.44 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=61.9
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCC--CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc---ccCcc
Q 004726 310 KVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDYS 383 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~~ 383 (733)
||+|||+ |.+|.+++..|+..| .+|+++|+++ ....+. .+.+... ...+.. +++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~---------dL~~~~~--------~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAA---------DLSHIET--------RATVKGYLGPEQLP 63 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHH---------HHTTSSS--------SCEEEEEESGGGHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHH---------HHhccCc--------CceEEEecCCCCHH
Confidence 7999998 999999999999988 6999999998 111110 0111110 013443 35664
Q ss_pred -ccCCCCEEEEecc--CCh------------HHHHHHHHHHHHhCCCCeEE
Q 004726 384 -EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCIL 419 (733)
Q Consensus 384 -~l~~aDlVI~avp--e~~------------~~k~~v~~~l~~~~~~~~ii 419 (733)
++++||+||.++. ... .+.+++.+.+.++++...++
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi 114 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMIC 114 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 6999999999873 211 56777777888887544443
No 279
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.43 E-value=7.8e-05 Score=82.33 Aligned_cols=88 Identities=18% Similarity=0.158 Sum_probs=61.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||.|.||.++|+.+...|.+|+++|+++.....+. ..| .... ++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G-------------~~~~-~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEG-------------YRVV-TMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTT-------------CEEC-CHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcC-------------CEeC-CHHHHHhc
Confidence 5799999999999999999999999999999987642221 111 1112 33 66899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (733)
||+||.++...--+. .+..+.++++++|+..+++
T Consensus 333 aDiVi~~~~t~~lI~----~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVIN----HDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCcccccC----HHHHhhCCCCcEEEEcCCC
Confidence 999999983221121 3444568999988644443
No 280
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.41 E-value=6.7e-05 Score=82.49 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=61.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||.|.||.++|+.+...|.+|+++|+++.....+. ..| ... .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CEe-cCHHHHHhc
Confidence 5799999999999999999999999999999987643321 111 111 233 56899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (733)
||+||.+.. ...+ +-.+..+.++++++|+..+++
T Consensus 313 aDiVi~~~~-t~~l---I~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTG-NVDV---IKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCS-SSSS---BCHHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCC-hhhh---cCHHHHhhcCCCcEEEEeCCC
Confidence 999999962 2221 112344568899988644443
No 281
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.37 E-value=0.0002 Score=79.34 Aligned_cols=86 Identities=26% Similarity=0.260 Sum_probs=61.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+ .|. .. .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCC-------------EE-ecHHHHHhC
Confidence 47999999999999999999999999999999988765421 121 11 122 45678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
+|+||++++...-+. .+..+.++++.+++...
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeC
Confidence 999999987443222 23445578888876433
No 282
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.36 E-value=0.00024 Score=72.57 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=49.6
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~a 388 (733)
+|+|||+|.||.+++..|.+.|++|+++|+++++++...+.. + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 699999999999999999999999999999998766542211 1 01 1233 45 889
Q ss_pred CEEEEeccCC
Q 004726 389 DMVIEAVIES 398 (733)
Q Consensus 389 DlVI~avpe~ 398 (733)
|+||.|+|..
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999999844
No 283
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.34 E-value=0.00052 Score=72.53 Aligned_cols=100 Identities=10% Similarity=-0.007 Sum_probs=63.2
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+.....+++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~ 60 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE----------------------LAIPVAYGSYE 60 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH----------------------TTCCCCBSSHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH----------------------cCCCceeCCHH
Confidence 3446899999999999999999985 67776 789999887654221 1111234555
Q ss_pred cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+.+. ++|+|++|+|..... ++.....+ .+. +++....+....+..
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al~---~gk~vl~EKP~~~~~~e~~ 108 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTYNQGHY--SAAKLALS---QGKPVLLEKPFTLNAAEAE 108 (330)
T ss_dssp HHHHCTTCSEEEECCCGGGHH--HHHHHHHH---TTCCEEECSSCCSSHHHHH
T ss_pred HHhcCCCCCEEEEcCCCHHHH--HHHHHHHH---CCCeEEEeCCCCCCHHHHH
Confidence 3444 799999999965543 33333222 232 455444455555433
No 284
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.31 E-value=0.00087 Score=66.21 Aligned_cols=94 Identities=16% Similarity=0.170 Sum_probs=59.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCC-HHHHHHHhhccccccCccccCCC
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
||.|+|+|.+|..+|..|.+.|++|+++|++++.++...+.. ....-.|-.+ .+... ...+.+|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~-----------~a~i~~a 66 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILR-----------DAEVSKN 66 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHH-----------HHTCCTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHH-----------hcCcccC
Confidence 699999999999999999999999999999999877642210 0000011111 11000 0236889
Q ss_pred CEEEEeccCChHHHHHHHHHHHHh-CCCCeEEE
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 420 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~-~~~~~ii~ 420 (733)
|+||.+++++.. ..+...+.+. .+...+++
T Consensus 67 d~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 67 DVVVILTPRDEV--NLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CEEEECCSCHHH--HHHHHHHHHHTSCCCEEEE
T ss_pred CEEEEecCCcHH--HHHHHHHHHHHcCCCeEEE
Confidence 999999985433 2333444443 45555554
No 285
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.31 E-value=0.00093 Score=71.32 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=53.5
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHC--CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . .+...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------------------~-~~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------------------T-GARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------------------H-CCEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------------------c-CCceeCCH
Confidence 3456899999999999999999987 77865 889999987764321 1 13445565
Q ss_pred -cccC--CCCEEEEeccCChH
Q 004726 383 -SEFK--DVDMVIEAVIESVP 400 (733)
Q Consensus 383 -~~l~--~aDlVI~avpe~~~ 400 (733)
+.++ ++|+|++|+|....
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEECCCcHHH
Confidence 3444 79999999995544
No 286
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.30 E-value=0.00081 Score=73.09 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=47.6
Q ss_pred ceEEEEcCCcC-cHHHHHHHHH--C---CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~l~~--~---G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
.||+|||+|.. +.+++..|+. . +.+|+++|+++++++.+...... ..... .++..++|+
T Consensus 3 ~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~----~~~~~-----------~~v~~t~d~ 67 (417)
T 1up7_A 3 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKR----LVKDR-----------FKVLISDTF 67 (417)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHH----HHTTS-----------SEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHH----HhhCC-----------eEEEEeCCH
Confidence 58999999985 2222234455 3 56899999999987763321111 11110 246666786
Q ss_pred -cccCCCCEEEEec
Q 004726 383 -SEFKDVDMVIEAV 395 (733)
Q Consensus 383 -~~l~~aDlVI~av 395 (733)
+++++||+||.++
T Consensus 68 ~~al~~AD~Viita 81 (417)
T 1up7_A 68 EGAVVDAKYVIFQF 81 (417)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHhCCCCEEEEcC
Confidence 8899999999998
No 287
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.29 E-value=0.0002 Score=75.65 Aligned_cols=100 Identities=20% Similarity=0.134 Sum_probs=70.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|||||.|.+|..+|+.+..-|.+|+.||+....... +. .+.. .++ +.+++
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~-------------~~~~-~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EK-------------GCVY-TSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HT-------------TCEE-CCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hc-------------Ccee-cCHHHHHhh
Confidence 58999999999999999999999999999987543111 00 1122 233 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC---CCHHHHhcccC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTS 436 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~---~~~~~l~~~~~ 436 (733)
||+|+.++|-..+.+.-+=++..+.++++++++ |++- +.-..+.+.+.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHH
Confidence 999999999777654444455666789999875 6763 33345555543
No 288
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.25 E-value=0.00039 Score=73.95 Aligned_cols=95 Identities=20% Similarity=0.200 Sum_probs=61.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHH--CCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~--~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
++|+|||+|.||..++..++. ...+|++||++++++++..+.+.. ..| + .+...++. +.+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g-~----------~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSG-L----------TIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTT-C----------EEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccC-c----------eEEEeCCHHHHH
Confidence 479999999999999988764 346899999999988775432210 001 0 12233444 567
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
++||+||.|+|... ...++. ...+++++.|...+|
T Consensus 193 ~~aDiVi~aTps~~--~~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 193 KGVDIITTVTADKA--YATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp TTCSEEEECCCCSS--EEEEEC--GGGCCTTCEEEECSC
T ss_pred hcCCEEEEeccCCC--CCceec--HHHcCCCCEEEECCC
Confidence 89999999998541 001111 135677776654433
No 289
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.25 E-value=0.00018 Score=77.77 Aligned_cols=86 Identities=20% Similarity=0.181 Sum_probs=60.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||.|.||.++|+.+...|.+|+++|+++.....+. ..| .... ++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~~~-sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQVL-LVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEEC-CHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Ceec-CHHHHHhh
Confidence 4799999999999999999999999999999987654431 111 1212 33 67889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+....--+. .+..+.++++++|+ |++
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVI-Nvg 298 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVC-NIG 298 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEE-ECS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEE-EeC
Confidence 999998654211111 23345678999876 444
No 290
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.24 E-value=0.00064 Score=68.24 Aligned_cols=87 Identities=20% Similarity=0.119 Sum_probs=56.7
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHCCCeeEE-EeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~G~~V~~-~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
+|.||+|+|+|.||..++..+.+.+.+++. +|++++. . ..+..+++++.+
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l 52 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADV 52 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTC
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHH
Confidence 357899999999999999999988777664 7887652 0 124445666443
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~ 429 (733)
.++|+||++.. ++..... +. +..+.-+++.|++++..
T Consensus 53 ~~~DVvIDft~--p~a~~~~---~~--l~~g~~vVigTTG~s~e 89 (243)
T 3qy9_A 53 KGADVAIDFSN--PNLLFPL---LD--EDFHLPLVVATTGEKEK 89 (243)
T ss_dssp TTCSEEEECSC--HHHHHHH---HT--SCCCCCEEECCCSSHHH
T ss_pred hCCCEEEEeCC--hHHHHHH---HH--HhcCCceEeCCCCCCHH
Confidence 39999998775 4433333 22 55555555556665543
No 291
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.24 E-value=0.00068 Score=70.87 Aligned_cols=98 Identities=12% Similarity=-0.016 Sum_probs=62.5
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHH-CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
++.||+|||+|.||.. ++..+.+ .+++|+ ++|+++++++...+.. + +...+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------------------~-~~~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----------------------R-IMPFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----------------------T-CCBCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------------------C-CCCcCCHH
Confidence 3468999999999997 8888877 467877 8999999877643211 1 1224454
Q ss_pred cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+.++++|+|+.|+|..... ++.....+ .+. +++....+....+..
T Consensus 62 ~ll~~~D~V~i~tp~~~h~--~~~~~al~---~gk~vl~EKP~~~~~~~~~ 107 (308)
T 3uuw_A 62 SLAKKCDCIFLHSSTETHY--EIIKILLN---LGVHVYVDKPLASTVSQGE 107 (308)
T ss_dssp HHHTTCSEEEECCCGGGHH--HHHHHHHH---TTCEEEECSSSSSSHHHHH
T ss_pred HHHhcCCEEEEeCCcHhHH--HHHHHHHH---CCCcEEEcCCCCCCHHHHH
Confidence 4566899999999955443 33333322 232 444434455555433
No 292
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.24 E-value=0.0057 Score=62.64 Aligned_cols=147 Identities=15% Similarity=0.144 Sum_probs=94.6
Q ss_pred eCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCccc--ccchhHHHHHHHHHh
Q 004726 20 LINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS--LMPDVSVELVVNLIE 95 (733)
Q Consensus 20 l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~--~~~~~~~~~~~~~i~ 95 (733)
-|++. .-+++....+.+.++++.+.+. .+-+|.|...|+. -..+ .... .+.. ....+ .++.
T Consensus 127 a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgGa-----r~qE-------Gi~sl~q~ak-i~~~l-~~~s 191 (285)
T 2f9i_B 127 VMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGGA-----RMQE-------GIISLMQMGK-TSVSL-KRHS 191 (285)
T ss_dssp EECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECSC-----CGGG-------HHHHHHHHHH-HHHHH-HHHH
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCc-----chhh-------hhhhHhHHHH-HHHHH-HHHH
Confidence 44553 3789999999999999998865 4667777654432 1211 1000 1111 11233 3466
Q ss_pred cCCCcEEEEeCCcccchhhHH-hhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHH
Q 004726 96 DCKKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG 174 (733)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~l-alacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA 174 (733)
....|.|+++.|.|.||+... ++.+|+++|.++|.+++-... +..+.+-+.+. -.--+|+.+
T Consensus 192 ~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~-------vi~~~~~~~~~----------e~~~~Ae~~ 254 (285)
T 2f9i_B 192 DAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRR-------VIEQTINEKLP----------DDFQTAEFL 254 (285)
T ss_dssp HTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH-------HHHHHHTSCCC----------TTTTBHHHH
T ss_pred cCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHH-------HHHHHhcccch----------HhHhhHHHH
Confidence 789999999999999998654 789999999999988863221 11111111111 111247888
Q ss_pred HHcCCccEEcCcchHHHHHHHHHH
Q 004726 175 WKLGLIDAVVTSEELLKVSRLWAL 198 (733)
Q Consensus 175 ~~~Glv~~vv~~~~l~~~a~~~a~ 198 (733)
.+.|+||.|++++++.+...++..
T Consensus 255 ~~~G~iD~Iv~~~e~r~~l~~~L~ 278 (285)
T 2f9i_B 255 LEHGQLDKVVHRNDMRQTLSEILK 278 (285)
T ss_dssp HHTTCCSEECCGGGHHHHHHHHHH
T ss_pred HhcCCccEEeChHHHHHHHHHHHH
Confidence 899999999998887766655544
No 293
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.24 E-value=0.00046 Score=72.95 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=64.7
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCC-------eeEEEeCC----hHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcc
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i 376 (733)
.||+|+|+ |.+|.+++..|+..|+ +|+++|++ +++++..... +...... ....+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d--------l~~~~~~------~~~~i 71 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMME--------IDDCAFP------LLAGM 71 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH--------HHTTTCT------TEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHH--------Hhhhccc------ccCcE
Confidence 58999998 9999999999999886 89999999 5544321111 1111000 11244
Q ss_pred ccccCc-cccCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEE
Q 004726 377 KGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 377 ~~~~~~-~~l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
..+++. +++++||+||.+..- +..+.+.+.+.+.+++.++++++
T Consensus 72 ~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii 130 (329)
T 1b8p_A 72 TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVL 130 (329)
T ss_dssp EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 555564 779999999988731 22455667777888874565544
No 294
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.20 E-value=0.0011 Score=70.54 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=62.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ ..+ +...+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------------------~~g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------------------ANG-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------------------TTT-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------------------HcC-CceeCCHHHH
Confidence 35899999999999999999886 67876 79999988765421 112 3344555 44
Q ss_pred cC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHH
Q 004726 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (733)
Q Consensus 385 l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (733)
++ ++|+|++|+|..... ++.....+. .. .+++....+....+.
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~al~~-gk-~v~~EKP~~~~~~~~ 105 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTHV--DLITRAVER-GI-PALCEKPIDLDIEMV 105 (344)
T ss_dssp TTCSCCCEEEECSCGGGHH--HHHHHHHHT-TC-CEEECSCSCSCHHHH
T ss_pred hcCCCCCEEEEeCCchhhH--HHHHHHHHc-CC-cEEEECCCCCCHHHH
Confidence 55 799999999965543 333333221 12 245444445555543
No 295
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.19 E-value=0.00063 Score=71.52 Aligned_cols=96 Identities=10% Similarity=0.024 Sum_probs=59.4
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHH-CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcc
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (733)
+..||+|||+|.||.. ++..+.+ .+++|+ ++|+++++++...+.. | +...++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~~ 60 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSLS 60 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcHH
Confidence 3458999999999997 8888876 477876 9999998766542210 1 12334444
Q ss_pred cc-CCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHH
Q 004726 384 EF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (733)
Q Consensus 384 ~l-~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (733)
.+ .++|+|++|+|..... ++.... +..+. +++....+....+
T Consensus 61 ~l~~~~D~V~i~tp~~~h~--~~~~~a---l~~G~~v~~eKP~~~~~~~ 104 (319)
T 1tlt_A 61 SLAASCDAVFVHSSTASHF--DVVSTL---LNAGVHVCVDKPLAENLRD 104 (319)
T ss_dssp HHHTTCSEEEECSCTTHHH--HHHHHH---HHTTCEEEEESSSCSSHHH
T ss_pred HhhcCCCEEEEeCCchhHH--HHHHHH---HHcCCeEEEeCCCCCCHHH
Confidence 33 6799999999965443 333222 23344 4444344455544
No 296
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.15 E-value=0.00012 Score=74.31 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=34.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHH
Q 004726 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~ 346 (733)
+|.|||+|.||.+++..|++.|. +|+++||++++++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 69999999999999999999998 99999999987654
No 297
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.14 E-value=0.0068 Score=67.22 Aligned_cols=137 Identities=12% Similarity=0.097 Sum_probs=91.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHH-HHhcCCCcEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-LIEDCKKPIVA 103 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~kp~Ia 103 (733)
.-++.+...+.+..+++.+.+. .+-+|.|.-. .|+.+.+-.. .+... .+.+.+ ....--.|+|+
T Consensus 118 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~~--------sl~~~-~~i~~~~~~~s~~iP~Is 182 (531)
T 3n6r_B 118 GGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGVD--------SLAGY-GEVFQRNIMASGVVPQIS 182 (531)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTHH--------HHHHH-HHHHHHHHHTTTTSCEEE
T ss_pred cccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCcccc--------hhhhH-HHHHHHHHHHhCCCCEEE
Confidence 4889999999999999988765 4567777653 3444432100 01111 122211 11224589999
Q ss_pred EeCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHH-------H
Q 004726 104 AVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------W 175 (733)
Q Consensus 104 av~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA-------~ 175 (733)
+|.|.|.|||......||++|+.++ +.+++ .|+...+ ..+|+.+++++. .
T Consensus 183 vv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~--~~~ge~v~~E~LGGa~~h~~ 240 (531)
T 3n6r_B 183 MIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVK--TVTNEQVSAEELGGATTHTR 240 (531)
T ss_dssp EECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHHHBHHHHHH
T ss_pred EEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHH--HHhCCccChhhcchHHHHhh
Confidence 9999999999988888999999985 66554 2322222 257899999998 8
Q ss_pred HcCCccEEcCcchHHHHHHHHHHHHH
Q 004726 176 KLGLIDAVVTSEELLKVSRLWALDIA 201 (733)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~~a 201 (733)
+.|++|.++++++ .+.+.++++.
T Consensus 241 ~sG~~d~v~~~e~---~a~~~~r~ll 263 (531)
T 3n6r_B 241 KSSVADAAFENDV---EALAEVRRLV 263 (531)
T ss_dssp TTSCCSEEESSHH---HHHHHHHHHH
T ss_pred ccCcceEEeCCHH---HHHHHHHHHH
Confidence 9999999997643 3444444444
No 298
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.12 E-value=0.00045 Score=69.31 Aligned_cols=77 Identities=21% Similarity=0.173 Sum_probs=52.5
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc-C
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 386 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l-~ 386 (733)
||+|||+|.||..++..+.+.|++| .++|+++. .++ ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------------------------------~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------------------------------MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------------------------------EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------------------------------hcCCHHHHhcC
Confidence 7999999999999999999999997 69998852 110 12333 334 6
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 387 ~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
++|+||+|+|. ..-.++.. ..+..+..+++.+
T Consensus 50 ~~DvVv~~~~~--~~~~~~~~---~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 50 EMDVAVEAASQ--QAVKDYAE---KILKAGIDLIVLS 81 (236)
T ss_dssp CCSEEEECSCH--HHHHHHHH---HHHHTTCEEEESC
T ss_pred CCCEEEECCCH--HHHHHHHH---HHHHCCCcEEEEC
Confidence 89999999993 33333332 3344566555443
No 299
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.12 E-value=0.0075 Score=66.92 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=96.9
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHH--
Q 004726 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-- 92 (733)
Q Consensus 17 ~i~l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (733)
.|.-+.+. .-+++....+.+..+++.+... .+-+|.|.-.| |+-+.+- ...+.. .-+++.+
T Consensus 100 ~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSg-----GaRmqEg--------~~~l~~-~~~i~~~~~ 164 (530)
T 3iav_A 100 AVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDSG-----GARIQEG--------VASLGA-YGEIFRRNT 164 (530)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----SBCGGGT--------HHHHHH-HHHHHHHHH
T ss_pred EEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhhh--------hhhHHH-HHHHHHHHH
Confidence 33334443 4889999999999999998765 46677776543 3333221 001111 1122211
Q ss_pred HHhcCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCH
Q 004726 93 LIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (733)
Q Consensus 93 ~i~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a 171 (733)
++.. -.|+|++|.|.|.|||......||++|++++ +.+++. |+...+ ..+|+.+++
T Consensus 165 ~~s~-~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~--~~~ge~v~~ 221 (530)
T 3iav_A 165 HASG-VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK--TVTGEDVGF 221 (530)
T ss_dssp HTTT-TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH--HHHCCCCCH
T ss_pred HHcC-CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHH--HHhCCcCCh
Confidence 1222 3999999999999999988889999999975 887762 333222 257899999
Q ss_pred HHH-------HHcCCccEEcCcc-hHHHHHHHHHHHH
Q 004726 172 EEG-------WKLGLIDAVVTSE-ELLKVSRLWALDI 200 (733)
Q Consensus 172 ~eA-------~~~Glv~~vv~~~-~l~~~a~~~a~~~ 200 (733)
++. ...|++|.+++++ +..+.++++...+
T Consensus 222 e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 222 EELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp HHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred hhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence 876 6899999999765 3555555555443
No 300
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.11 E-value=0.0013 Score=70.78 Aligned_cols=87 Identities=22% Similarity=0.315 Sum_probs=60.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|+|+|.+|.++|+.+...|.+|+++|+++.....+. ..| ... .++ +.+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~v-~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FRL-VKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CEe-ccHHHHHhc
Confidence 4799999999999999999999999999999987644331 111 111 123 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (733)
+|+||.| +....+.. .+....++++++|+ |++.
T Consensus 276 ADIVi~a-tgt~~lI~---~e~l~~MK~gailI-Nvgr 308 (435)
T 3gvp_A 276 VDIVITC-TGNKNVVT---REHLDRMKNSCIVC-NMGH 308 (435)
T ss_dssp CSEEEEC-SSCSCSBC---HHHHHHSCTTEEEE-ECSS
T ss_pred CCEEEEC-CCCcccCC---HHHHHhcCCCcEEE-EecC
Confidence 9999997 43333211 23344578898875 4443
No 301
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.11 E-value=0.00019 Score=76.54 Aligned_cols=104 Identities=12% Similarity=0.090 Sum_probs=63.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHh--------cCC---CCHHHHHHHhhccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT--------RGK---LTQDKANNALKMLK 377 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~--------~g~---~~~~~~~~~~~~i~ 377 (733)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.+. - .+.+. .+. ++.+.....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-G---a~~~~l~~~~~~~~gya~~~~~~~~~~~----- 255 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-G---AQWLDLGIDAAGEGGYARELSEAERAQQ----- 255 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-T---CEECCCC-------------CHHHHHHH-----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C---CeEEeccccccccccchhhhhHHHHhhh-----
Confidence 589999999999999999999999999999999987765320 0 00000 000 111100000
Q ss_pred cccCc-cccCCCCEEEEec--cCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 378 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 378 ~~~~~-~~l~~aDlVI~av--pe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
..++ +.++++|+||.++ |....- .-+-++..+.++++.+|++.+
T Consensus 256 -~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 256 -QQALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp -HHHHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETT
T ss_pred -HHHHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEe
Confidence 1122 5689999999986 421110 011244556678898887543
No 302
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.10 E-value=0.0022 Score=59.40 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCC-hHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 346 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~-~e~~~~ 346 (733)
++|.|+|+|.+|..++..|.+.|++|+++|++ ++..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 47999999999999999999999999999998 455444
No 303
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.08 E-value=0.00071 Score=71.18 Aligned_cols=70 Identities=17% Similarity=0.045 Sum_probs=51.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHH--CCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~--~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
++|+|||+|.||..++..|+. ...+|.+|||+++++++..+.+.. .+ + .+. .+++ +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 479999999999999999987 346899999999998876443211 01 0 122 3444 567
Q ss_pred CCCCEEEEeccCC
Q 004726 386 KDVDMVIEAVIES 398 (733)
Q Consensus 386 ~~aDlVI~avpe~ 398 (733)
++|+||.|+|..
T Consensus 187 -~aDvVi~aTp~~ 198 (322)
T 1omo_A 187 -RCDVLVTTTPSR 198 (322)
T ss_dssp -SSSEEEECCCCS
T ss_pred -CCCEEEEeeCCC
Confidence 899999999843
No 304
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.07 E-value=0.00093 Score=73.99 Aligned_cols=74 Identities=14% Similarity=0.202 Sum_probs=48.7
Q ss_pred eEEEEcCCcCcHH--HHHHHHH----C--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccC
Q 004726 310 KVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (733)
Q Consensus 310 kI~VIG~G~mG~~--iA~~l~~----~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (733)
||+|||+|..|.. +...++. . +.+|+++|+++++++.....+++..+.. | .--.+..++|
T Consensus 2 KI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~---~---------~~~~i~~t~d 69 (477)
T 3u95_A 2 KISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEEL---N---------SPVKVVKTES 69 (477)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHH---T---------CCCEEEEESC
T ss_pred EEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHc---C---------CCeEEEEeCC
Confidence 7999999998754 2222332 2 3479999999998876543333322211 1 0024667788
Q ss_pred c-cccCCCCEEEEec
Q 004726 382 Y-SEFKDVDMVIEAV 395 (733)
Q Consensus 382 ~-~~l~~aDlVI~av 395 (733)
. +++++||+||.++
T Consensus 70 ~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 70 LDEAIEGADFIINTA 84 (477)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEECc
Confidence 7 7799999999986
No 305
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.06 E-value=0.00027 Score=75.94 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=36.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999987765
No 306
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.06 E-value=0.00067 Score=69.08 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=49.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|.|||+|.||.+++..|++.|.+|++++|++++++... .+ + +.. .+++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------~-------------~~~-~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------G-------------CDC-FMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------T-------------CEE-ESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------C-------------CeE-ecHHHhccC
Confidence 4799999999999999999999999999999998876542 11 1 111 123345589
Q ss_pred CEEEEeccCC
Q 004726 389 DMVIEAVIES 398 (733)
Q Consensus 389 DlVI~avpe~ 398 (733)
|+||.|+|-.
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999843
No 307
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.04 E-value=0.001 Score=71.09 Aligned_cols=151 Identities=11% Similarity=0.051 Sum_probs=93.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|+|||.|.-|.+-|++|..+|.+|++--|.....+.. +.+++..+. ...+.+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~-----~S~~~A~~~-------------Gf~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKR-----ASWRKATEN-------------GFKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTC-----HHHHHHHHT-------------TCEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCccccc-----chHHHHHHC-------------CCEecCHHHHHHhC
Confidence 689999999999999999999999998876633211110 001111222 23333434789999
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCC--cEEEEecCCCC----------CCCCee
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPA----------HVMPLL 456 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~--~~ig~h~~~p~----------~~~~lv 456 (733)
|+|+.-+|+.. -..++++|.+.++++..+. -+.++.+.. ..+..|. .++-+-|-.|- .-.|.+
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~-faHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALG-YSHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEE-ESSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEE-ecCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 99999999554 4577899999999999875 345554432 2222222 23333332221 122333
Q ss_pred EEec-CCCCCHHHHHHHHHHHHHcCCe
Q 004726 457 EIVR-TERTSAQVILDLMTVGKIIKKV 482 (733)
Q Consensus 457 eiv~-~~~t~~e~~~~~~~l~~~lG~~ 482 (733)
-.|- -...+-.+.+.+..+...+|..
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCC
Confidence 3331 1233556778888899999853
No 308
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.03 E-value=0.00087 Score=72.32 Aligned_cols=88 Identities=19% Similarity=0.244 Sum_probs=61.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (733)
++|+|||.|.+|..+|+.+...|.+|+++|+++.....+. ..| .... ++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~vv-~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEVV-TLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEEC-CHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------ceec-cHHHHHhh
Confidence 5799999999999999999999999999999987543321 111 1111 22 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (733)
||+|+.+....--+. .+..+.++++++|+ |++..
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCCC
Confidence 999999864221111 33445678999885 56543
No 309
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.03 E-value=0.00044 Score=72.37 Aligned_cols=91 Identities=13% Similarity=0.126 Sum_probs=58.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
++|+|||+|.||..++..|... ..+|++||++ +.++..+.+.+. .|. .+... +. +++
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~------~g~-----------~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRR------CGV-----------PARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHH------HTS-----------CEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHh------cCC-----------eEEEe-CHHHHH
Confidence 4799999999999999999863 4589999999 433332222111 010 12223 44 667
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (733)
++||+||.|+|... .++. .+.++++++|....|.
T Consensus 182 ~~aDIVi~aT~s~~----pvl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTT----PLFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSS----CSSC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCC----cccC--HHHcCCCcEEEECCCC
Confidence 89999999998532 2222 2457788877655443
No 310
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.02 E-value=0.00058 Score=73.13 Aligned_cols=87 Identities=22% Similarity=0.190 Sum_probs=57.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc--ccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~l 385 (733)
++|+|||+|.||..+|..|++. ++|+++||+++++++..+ .... ..+.. ..++ +.+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~-----------~~~~---------~~~d~~~~~~l~~ll 75 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----------FATP---------LKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----------TSEE---------EECCTTCHHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHh-----------hCCe---------EEEecCCHHHHHHHH
Confidence 5899999999999999999998 999999999998776421 1100 00000 0112 456
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
+++|+||.|+|.... ..+. ...+..++.+++
T Consensus 76 ~~~DvVIn~~P~~~~--~~v~---~a~l~~G~~~vD 106 (365)
T 2z2v_A 76 KEFELVIGALPGFLG--FKSI---KAAIKSKVDMVD 106 (365)
T ss_dssp TTCSCEEECCCHHHH--HHHH---HHHHHTTCCEEE
T ss_pred hCCCEEEECCChhhh--HHHH---HHHHHhCCeEEE
Confidence 789999999984332 2332 233445665554
No 311
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.02 E-value=0.00052 Score=71.40 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=35.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~ 347 (733)
++|.|||+|.||.+++..|++.|. +|+++||++++++..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l 181 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL 181 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 579999999999999999999998 999999999887654
No 312
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=97.02 E-value=0.0085 Score=66.64 Aligned_cols=139 Identities=15% Similarity=0.088 Sum_probs=92.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++.....+.+..+++.+.+. .+-+|.|+. |.|+.+.+-... ...+.+...+.. .+ .-..|.|++
T Consensus 108 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~--~~-s~~iP~Isv 173 (523)
T 1on3_A 108 GGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV--KL-SGVVPQIAI 173 (523)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH--HH-TTTSCEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH--Hh-cCCCCEEEE
Confidence 4889999999999999998765 466777765 445555432110 001111111111 12 344999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHH-----HH--HHc
Q 004726 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EG--WKL 177 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~-----eA--~~~ 177 (733)
+.|+|.||+......||++|+.+++.+++. |+..... .+|+.++.+ +. .+.
T Consensus 174 v~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~h~~~~ 231 (523)
T 1on3_A 174 IAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGGAEAHMAIS 231 (523)
T ss_dssp EEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHSHHHHHHTT
T ss_pred EcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcccHHHHhhcc
Confidence 999999999999999999999999887764 3222222 457788764 22 268
Q ss_pred CCccEEcCc-chHHHHHHHHHHH
Q 004726 178 GLIDAVVTS-EELLKVSRLWALD 199 (733)
Q Consensus 178 Glv~~vv~~-~~l~~~a~~~a~~ 199 (733)
|++|.++++ .++.+.+.++..-
T Consensus 232 G~vd~vv~d~~~~~~~~r~lL~~ 254 (523)
T 1on3_A 232 GNIHFVAEDDDAAELIAKKLLSF 254 (523)
T ss_dssp CCCSEEESSHHHHHHHHHHHHHT
T ss_pred CceEEEeCCHHHHHHHHHHHHHh
Confidence 999999985 4455555555443
No 313
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.99 E-value=0.00023 Score=76.66 Aligned_cols=92 Identities=21% Similarity=0.194 Sum_probs=60.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCC-C-----CHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-L-----TQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~-~-----~~~~~~~~~~~i~~~~~~ 382 (733)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+.. |. . +..+..
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~~~~~~~~~~l~------------ 226 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRIHTRYSSAYELE------------ 226 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSSEEEECCHHHHH------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCeeEeccCCHHHHH------------
Confidence 5899999999999999999999999999999998876643210 10 0 111111
Q ss_pred cccCCCCEEEEeccCChH-HHHHHHHHHHHhCCCCeEEEec
Q 004726 383 SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATN 422 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~-~k~~v~~~l~~~~~~~~ii~s~ 422 (733)
+.++++|+||+|++-... ...-+.++..+.++++.+|+..
T Consensus 227 ~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 227 GAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp HHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred HHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 345689999998842221 1111123444567788777543
No 314
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.97 E-value=0.0026 Score=66.89 Aligned_cols=69 Identities=20% Similarity=0.073 Sum_probs=49.2
Q ss_pred ceEEEEcCCcCcH-HHHHHHHHC-CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccc-cccCcccc
Q 004726 309 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~-~iA~~l~~~-G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~l 385 (733)
.||+|||+|.||. .++..+.+. +++|+++|++++++++..+. .| .-. +.++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~----------~g------------~~~~~~~~~~~l 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATR----------YR------------VSATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHH----------TT------------CCCCCSSTTGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH----------cC------------CCccccCHHHHh
Confidence 4899999999998 489888764 77888999999887654221 01 111 23333555
Q ss_pred -CCCCEEEEeccCCh
Q 004726 386 -KDVDMVIEAVIESV 399 (733)
Q Consensus 386 -~~aDlVI~avpe~~ 399 (733)
.++|+|++|+|...
T Consensus 61 ~~~~D~V~i~tp~~~ 75 (323)
T 1xea_A 61 QYGVDAVMIHAATDV 75 (323)
T ss_dssp GGCCSEEEECSCGGG
T ss_pred hcCCCEEEEECCchh
Confidence 68999999999444
No 315
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.96 E-value=0.00073 Score=72.58 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=58.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|+|+|+|.+|..+++.++..|++|+++|+++++++.+.+.. ...+.....+.++.. +.++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~~~~~~~~~~~l~------------~~~~~~ 230 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGRVITLTATEANIK------------KSVQHA 230 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTSEEEEECCHHHHH------------HHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----CceEEEecCCHHHHH------------HHHhCC
Confidence 6899999999999999999999999999999998876542210 000000000111111 345689
Q ss_pred CEEEEeccCCh-HHHHHHHHHHHHhCCCCeEEEe
Q 004726 389 DMVIEAVIESV-PLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 389 DlVI~avpe~~-~~k~~v~~~l~~~~~~~~ii~s 421 (733)
|+||+|++-.. ....-+.++..+.++++.+|+.
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTTSCTTCEEEE
T ss_pred CEEEECCCCCccccchhHHHHHHHhhcCCCEEEE
Confidence 99999997332 1111112444455677776654
No 316
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.95 E-value=0.025 Score=62.95 Aligned_cols=141 Identities=15% Similarity=0.095 Sum_probs=91.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++.+...+.+..+++.+.+. .+-+|.|.-.|. +.+.+-.+... ....+.....++ ..+.....|+|++
T Consensus 134 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgG-----ARl~~q~~~~~--~~~~~~~i~~~~--~~ls~~giP~Isv 203 (555)
T 3u9r_B 134 GGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGG-----ANLPRQDEVFP--DREHFGRIFFNQ--ANMSARGIPQIAV 203 (555)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGGGGTSS--STTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCC-----CCCCCcceeec--ccccHHHHHHHH--HHHhcCCCCEEEE
Confidence 4789999999999999998865 456777765433 33321111000 011122222222 2356678999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeC-CceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHHHH-------HH
Q 004726 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WK 176 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~-~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~eA-------~~ 176 (733)
|.|.|.|||......||++|+.+ ++.+++ -|+...+ ..+|+.+++++. ..
T Consensus 204 v~G~~~GGga~~~a~~d~vim~e~~a~i~~--------------------aGP~vik--~~~ge~~~~e~LGGa~~h~~~ 261 (555)
T 3u9r_B 204 VMGSCTAGGAYVPAMSDETVMVREQATIFL--------------------AGPPLVK--AATGEVVSAEELGGADVHCKV 261 (555)
T ss_dssp ECSCCBGGGGHHHHTSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHHHBHHHHHHT
T ss_pred EecCCCccHHHHHHhCCceEEecCCceEEE--------------------ccHHHHH--HHhcCccChhhccchhhhhhc
Confidence 99999999999999999998875 454332 1222211 267899999998 88
Q ss_pred cCCccEEcCcchHHHHHHHHHHHH
Q 004726 177 LGLIDAVVTSEELLKVSRLWALDI 200 (733)
Q Consensus 177 ~Glv~~vv~~~~l~~~a~~~a~~~ 200 (733)
.|++|.++++++ .+...++++
T Consensus 262 sGv~d~v~~de~---~a~~~~r~~ 282 (555)
T 3u9r_B 262 SGVADHYAEDDD---HALAIARRC 282 (555)
T ss_dssp TCSCSEEESSHH---HHHHHHHHH
T ss_pred cCceeEEeCCHH---HHHHHHHHH
Confidence 999999997653 334444444
No 317
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.94 E-value=0.0027 Score=67.71 Aligned_cols=96 Identities=20% Similarity=0.124 Sum_probs=62.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------g~~~~~~~~~~l 62 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-----------------------NCAGDATMEALL 62 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-----------------------TCCCCSSHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHHHh
Confidence 4899999999999999999887 78865 8899998876643210 12224455 444
Q ss_pred --CCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 386 --KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 386 --~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
.++|+|++|+|..... ++..... ..+. +++....+....+..
T Consensus 63 ~~~~~D~V~i~tp~~~h~--~~~~~al---~~gk~vl~EKP~~~~~~~~~ 107 (354)
T 3db2_A 63 AREDVEMVIITVPNDKHA--EVIEQCA---RSGKHIYVEKPISVSLDHAQ 107 (354)
T ss_dssp HCSSCCEEEECSCTTSHH--HHHHHHH---HTTCEEEEESSSCSSHHHHH
T ss_pred cCCCCCEEEEeCChHHHH--HHHHHHH---HcCCEEEEccCCCCCHHHHH
Confidence 5799999999976654 3222222 2333 455444455555433
No 318
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.93 E-value=0.012 Score=65.41 Aligned_cols=140 Identities=16% Similarity=0.117 Sum_probs=93.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++.....+.+..+++.+... .+-+|.|+. |.|+.+.+-... ...+.+...+.. .+ .-..|.|++
T Consensus 104 gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~--~~-s~~iP~Isv 169 (522)
T 1x0u_A 104 GGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV--MA-SGVIPQITI 169 (522)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH--HH-TTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH--Hh-CCCCcEEEE
Confidence 4789999999999999998765 466788875 445555432110 001111111111 12 345999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCC-c-eEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHH-----H--HH
Q 004726 105 VEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----E--GW 175 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~-a-~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~-----e--A~ 175 (733)
+.|+|.||+......||++|+.++ + .+++ .|+..... .+|+.++.+ + +.
T Consensus 170 v~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~--------------------aGP~vI~~--~~ge~~~~e~lggae~~~~ 227 (522)
T 1x0u_A 170 MAGPAAGGAVYSPALTDFIIMIKGDAYYMFV--------------------TGPEITKV--VLGEEVSFQDLGGAVVHAT 227 (522)
T ss_dssp ECSEEEGGGGHHHHHSSEEEEECSTTCEEES--------------------SCHHHHHH--TTCCCCCHHHHHBHHHHHH
T ss_pred EcCCCchHHHHHHhcCCeEEEecCCccEEEe--------------------cCHHHHHH--HhCCcCChhhcchHHHHhh
Confidence 999999999999999999999987 7 6665 22222211 567788764 2 23
Q ss_pred HcCCccEEcCc-chHHHHHHHHHHHH
Q 004726 176 KLGLIDAVVTS-EELLKVSRLWALDI 200 (733)
Q Consensus 176 ~~Glv~~vv~~-~~l~~~a~~~a~~~ 200 (733)
+.|++|.++++ .++.+.+.++..-+
T Consensus 228 ~~G~~d~vv~~~~~~~~~~~~ll~~l 253 (522)
T 1x0u_A 228 KSGVVHFMVDSEQEAINLTKRLLSYL 253 (522)
T ss_dssp TTCCCSEEESCHHHHHHHHHHHHHHS
T ss_pred cCceeEEEeCCHHHHHHHHHHHHHhc
Confidence 68999999985 45666666665444
No 319
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.93 E-value=0.0021 Score=68.47 Aligned_cols=100 Identities=16% Similarity=0.034 Sum_probs=61.9
Q ss_pred CCCcceEEEEcCCcCcH-HHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccC
Q 004726 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (733)
Q Consensus 305 ~~~~~kI~VIG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (733)
+|+..||+|||+|.||. .++..+.+. +++|+ ++|+++++++...+.. .+...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF-----------------------GGEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH-----------------------CSEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCCCcCC
Confidence 34456899999999998 789988887 77876 8899998876543211 1222345
Q ss_pred c-cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 382 Y-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 382 ~-~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+ +.++ ++|+|+.|+|..... ++..... ..+. +++-..-+....+..
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al---~aGk~Vl~EKP~a~~~~ea~ 130 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLHA--EWIDRAL---RAGKHVLAEKPLTTDRPQAE 130 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGHH--HHHHHHH---HTTCEEEEESSSCSSHHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHH---HCCCcEEEeCCCCCCHHHHH
Confidence 5 3343 689999999965553 3333322 2333 444434455554433
No 320
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=96.93 E-value=0.012 Score=65.83 Aligned_cols=135 Identities=15% Similarity=0.038 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHh--cCCCcEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE--DCKKPIV 102 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~kp~I 102 (733)
.-++.....+.+..+++.+.+. .+-+|.|.. |.|+.+.+-.. .+.. +.+++ .++. .-..|.|
T Consensus 121 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~--------sl~~-~~~i~-~~~~~~s~~iP~I 184 (548)
T 2bzr_A 121 GGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVV--------SLGL-YSRIF-RNNILASGVIPQI 184 (548)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTH--------HHHH-HHHHH-HHHHHTTTTSCEE
T ss_pred cCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHH--------HHHH-HHHHH-HHHHHhcCCCcEE
Confidence 4799999999999999998865 466788875 44555543211 0111 11223 2222 3349999
Q ss_pred EEeCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHH-----H--H
Q 004726 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----E--G 174 (733)
Q Consensus 103 aav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~-----e--A 174 (733)
+++.|+|.||+......||++|+.++ +.+++. |+..... .+|+.++.+ + +
T Consensus 185 svv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lggae~h~ 242 (548)
T 2bzr_A 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELGGAHTHM 242 (548)
T ss_dssp EEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHH
T ss_pred EEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcccHHHHh
Confidence 99999999999988889999999987 877754 3322222 457888864 2 2
Q ss_pred HHcCCccEEcCcc-hHHHHHHHHH
Q 004726 175 WKLGLIDAVVTSE-ELLKVSRLWA 197 (733)
Q Consensus 175 ~~~Glv~~vv~~~-~l~~~a~~~a 197 (733)
.+.|++|.+++++ ++.+.+.++.
T Consensus 243 ~~sG~~d~vv~d~~~~~~~~r~ll 266 (548)
T 2bzr_A 243 AKSGTAHYAASGEQDAFDYVRELL 266 (548)
T ss_dssp HTSSCCSEEESSHHHHHHHHHHHH
T ss_pred hccCceeEEeCCHHHHHHHHHHHH
Confidence 3689999999753 4444444443
No 321
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.90 E-value=0.0026 Score=67.14 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=61.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . .+. .+++ +.+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~-~~~-~~~~~~~l 59 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA----------------------Y-GCE-VRTIDAIE 59 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------------------T-TCE-ECCHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH----------------------h-CCC-cCCHHHHh
Confidence 5899999999999999999985 77877 799999887654221 0 122 3444 344
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHh
Q 004726 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (733)
Q Consensus 386 ~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (733)
+ ++|+|+.|+|..... ++.....+. ...+++....+....+..
T Consensus 60 ~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~~~ 104 (331)
T 4hkt_A 60 AAADIDAVVICTPTDTHA--DLIERFARA--GKAIFCEKPIDLDAERVR 104 (331)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCSCSSHHHHH
T ss_pred cCCCCCEEEEeCCchhHH--HHHHHHHHc--CCcEEEecCCCCCHHHHH
Confidence 4 799999999965543 333332221 122454444455555443
No 322
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.90 E-value=0.0021 Score=67.57 Aligned_cols=95 Identities=15% Similarity=0.084 Sum_probs=60.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. +++++ ++|+++++++...+ . .+.....+++ +.+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~-----------~-----------~~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFAS-----------R-----------YQNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGG-----------G-----------SSSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH-----------H-----------cCCCeEeCCHHHHh
Confidence 4799999999999999999886 56764 88999987654311 1 1112334555 445
Q ss_pred -CCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHH
Q 004726 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (733)
Q Consensus 386 -~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (733)
.++|+|++|+|..... ++..+. +..+. +++-...+....+
T Consensus 60 ~~~~D~V~i~tp~~~h~--~~~~~a---l~~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLHF--AQAKAA---LSAGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGGHH--HHHHHH---HHTTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHHHH--HHHHHH---HHcCCcEEEecCCcCCHHH
Confidence 6899999999954432 333332 23344 4444334455543
No 323
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.89 E-value=0.0018 Score=68.84 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=61.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+.....+++ +.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------------------LGVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------------------HTCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCceeCCHHHHh
Confidence 4899999999999999999875 67776 789999887664321 1111234555 344
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 386 ~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+ ++|+|++|+|..... ++..... ..+. +++....+..+.+..
T Consensus 61 ~~~~~D~V~i~tp~~~h~--~~~~~al---~~gk~v~~EKP~~~~~~e~~ 105 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTHS--ELVIACA---KAKKHVFCEKPLSLNLADVD 105 (344)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEEESCSCSCHHHHH
T ss_pred cCCCCCEEEEcCCCcchH--HHHHHHH---hcCCeEEEECCCCCCHHHHH
Confidence 4 799999999955443 3333322 2333 444444455555433
No 324
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.89 E-value=0.002 Score=65.86 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=35.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~ 347 (733)
++|.|||+|.||.+++..|+..|. +|++++|+.++++..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~l 159 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL 159 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 479999999999999999999997 899999999887654
No 325
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.87 E-value=0.0036 Score=65.48 Aligned_cols=97 Identities=19% Similarity=0.140 Sum_probs=61.2
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCC--eeEEEeC--ChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccC--c
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD--Y 382 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~--~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~--~ 382 (733)
||+|+|+ |.+|.+++..|+..|+ +++++|+ ++++++.....+.... . ..+. .-.+..+++ .
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~--~~~~---------~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-A--GTRS---------DANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-T--TSCC---------CCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-H--hcCC---------CeEEEeCCcchH
Confidence 7999999 9999999999998885 7999999 7765443222221110 0 0000 002222333 5
Q ss_pred cccCCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCeEEE
Q 004726 383 SEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 383 ~~l~~aDlVI~avp--e------------~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
+++++||+||.+.- . +..+.+.+.+.+.++. +.++.
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vl 119 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIF 119 (313)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEE
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEE
Confidence 78999999998872 1 2345556667777777 55444
No 326
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.86 E-value=0.0012 Score=67.77 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=36.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (733)
++|.|+|+|.||.+++..|++.|.+|++++|++++++...
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~ 159 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELA 159 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5799999999999999999999999999999998876653
No 327
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.86 E-value=0.0011 Score=68.24 Aligned_cols=41 Identities=10% Similarity=0.098 Sum_probs=36.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~ 349 (733)
++|.|+|+|.||.+++..|++.|. +|++++|++++++...+
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~ 168 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE 168 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHH
Confidence 579999999999999999999996 99999999988776543
No 328
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.83 E-value=0.0021 Score=68.52 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|+|+|+|.||..+|+.|...|.+|+++|++++++++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 479999999999999999999999999999999876653
No 329
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.83 E-value=0.0023 Score=68.47 Aligned_cols=97 Identities=18% Similarity=0.096 Sum_probs=60.6
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
+..||+|||+|.||...+..+.+. +++|+ ++|+++++++.+. +. .+...+++ +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~-------------g~~~~~~~~~ 59 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QK-------------GLKIYESYEA 59 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TT-------------TCCBCSCHHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hc-------------CCceeCCHHH
Confidence 345899999999999999998876 67876 6799998765321 11 12334555 3
Q ss_pred ccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 384 ~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
.++ ++|+|++|+|..... ++..+.. ..+. +++-...+....+..
T Consensus 60 ll~~~~~D~V~i~tp~~~h~--~~~~~al---~aGkhVl~EKP~a~~~~ea~ 106 (359)
T 3e18_A 60 VLADEKVDAVLIATPNDSHK--ELAISAL---EAGKHVVCEKPVTMTSEDLL 106 (359)
T ss_dssp HHHCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEEESSCCSSHHHHH
T ss_pred HhcCCCCCEEEEcCCcHHHH--HHHHHHH---HCCCCEEeeCCCcCCHHHHH
Confidence 343 799999999965543 3333322 2333 444433445554433
No 330
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=96.82 E-value=0.0025 Score=66.51 Aligned_cols=95 Identities=19% Similarity=0.293 Sum_probs=60.6
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHC-C--CeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc---ccC
Q 004726 309 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~-G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (733)
+||+||| +|.+|.++|..|+.. + .+++++|+++ .++ +.. + . +.+... .-.+.. +.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~-G~a-----~-D-l~~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP-GVA-----V-D-LSHIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH-HHH-----H-H-HHTSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch-hHH-----H-H-hhCCCC--------CceEEEecCCCc
Confidence 3899999 899999999999875 5 4899999987 332 110 0 0 111100 012222 245
Q ss_pred ccccCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 382 ~~~l~~aDlVI~avpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
++++++||+||.+..- +..+.+++.+.+.++++ +++++.
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlv 116 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGI 116 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEE
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE
Confidence 6889999999998731 33455566667888875 444443
No 331
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.82 E-value=0.0042 Score=65.84 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=49.9
Q ss_pred CcceEEEEcCCcCcHHHHHHHH-H-CCCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~-~-~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
++.||+|||+|.||..++..+. + .|++| .++|+++++++...+. .| .....+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~----------~g------------~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNE----------LG------------VETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHT----------TC------------CSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHH----------hC------------CCcccCCHH
Confidence 3468999999999999999998 5 47775 5789999887653210 11 11223444
Q ss_pred cccC--CCCEEEEeccCChH
Q 004726 383 SEFK--DVDMVIEAVIESVP 400 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~ 400 (733)
+.++ ++|+|++|+|....
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHhH
Confidence 3444 69999999995544
No 332
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.81 E-value=0.0021 Score=65.79 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=35.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|+|+|.||.+++..|++.|.+|+++||++++++..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 579999999999999999999999999999999887654
No 333
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.79 E-value=0.0029 Score=57.80 Aligned_cols=103 Identities=11% Similarity=0.042 Sum_probs=63.9
Q ss_pred ceEEEEcC----CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
++|+|||+ |.||..++..|.+.|++ +|++|+.+... ....+....++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHHH
Confidence 47999999 89999999999999997 66677653110 0112344445544
Q ss_pred c-CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccC-CCCcEEE
Q 004726 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 443 (733)
Q Consensus 385 l-~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~-~~~~~ig 443 (733)
+ ..+|++|.++| .+...++++++.+.-.+ .++. ++++.. .++.+... ..-+++|
T Consensus 67 l~~~vDlavi~vp--~~~~~~v~~~~~~~gi~-~i~~-~~g~~~-~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 67 LKEPVDILDVFRP--PSALMDHLPEVLALRPG-LVWL-QSGIRH-PEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCSCCSEEEECSC--HHHHTTTHHHHHHHCCS-CEEE-CTTCCC-HHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEeC--HHHHHHHHHHHHHcCCC-EEEE-cCCcCH-HHHHHHHHHcCCEEEc
Confidence 3 56999999999 56667777776554333 4443 333332 34443332 3345554
No 334
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.74 E-value=0.0016 Score=68.73 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=64.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCC-------eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
-||+|+|+ |.+|.+++..|+.... ++.++|+++.... + +.+.-.+ ..... .....+..++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~-~-~Gva~DL----~~~~~------~~~~~~~~~~ 92 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKA-L-AGVEAEL----EDCAF------PLLDKVVVTA 92 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-H-HHHHHHH----HHTTC------TTEEEEEEES
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCcccc-c-hhhhhhh----hhcCc------cCCCcEEEcC
Confidence 48999997 9999999999998754 7999999764311 1 1100001 11100 0112233344
Q ss_pred Cc-cccCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 381 DY-SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 381 ~~-~~l~~aDlVI~av--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
+. +++++||+||.+. |- +..+.+.+.+.+.++++++++|+..+
T Consensus 93 ~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 44 7899999999876 21 34466666677888888888654433
No 335
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.70 E-value=0.0023 Score=66.98 Aligned_cols=92 Identities=21% Similarity=0.124 Sum_probs=58.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. ++++ .++|+++++++...+ .+...+++ +.+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------------------------~~~~~~~~~~~l 65 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------------------------GCVIESDWRSVV 65 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------------------------TCEEESSTHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------------------------hCcccCCHHHHh
Confidence 5899999999999999999886 6775 489999887543210 02234455 445
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHH
Q 004726 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (733)
Q Consensus 386 ~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (733)
+ ++|+|++|+|..... ++..+. +..+. +++....+....+
T Consensus 66 ~~~~~D~V~i~tp~~~h~--~~~~~a---l~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 66 SAPEVEAVIIATPPATHA--EITLAA---IASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp TCTTCCEEEEESCGGGHH--HHHHHH---HHTTCEEEEESSSCSCHHH
T ss_pred hCCCCCEEEEeCChHHHH--HHHHHH---HHCCCcEEEcCCCcCCHHH
Confidence 3 799999999954432 333332 23343 4444344555543
No 336
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.68 E-value=0.0056 Score=64.48 Aligned_cols=69 Identities=19% Similarity=0.120 Sum_probs=48.5
Q ss_pred eEEEEcCCcCcHHH-HHHHHHCCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 310 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 310 kI~VIG~G~mG~~i-A~~l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
||+|||+|.||..+ +..+.+.|++|+ ++|+++++++...+. .| .....+++ +.++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~----------~g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATE----------NG------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------TT------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH----------cC------------CCcccCCHHHHhc
Confidence 79999999999998 778877788866 789999886653221 11 11123444 3344
Q ss_pred --CCCEEEEeccCChH
Q 004726 387 --DVDMVIEAVIESVP 400 (733)
Q Consensus 387 --~aDlVI~avpe~~~ 400 (733)
++|+|++|+|....
T Consensus 60 ~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 60 DPDVDAVYVSTTNELH 75 (332)
T ss_dssp CTTCCEEEECSCGGGH
T ss_pred CCCCCEEEEeCChhHh
Confidence 59999999995443
No 337
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.66 E-value=0.0015 Score=68.99 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=59.5
Q ss_pred CCcceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
+++.||+|||+|.||..++..+.+. +.+|+ ++|+++++++...+ . .+.....+++
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~-----------~-----------~~~~~~~~~~~ 60 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFAN-----------K-----------YHLPKAYDKLE 60 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------C-----------CCCSCEESCHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------H-----------cCCCcccCCHH
Confidence 3456899999999999999998875 45655 77999887554311 1 1111234555
Q ss_pred cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+.+. ++|+|++|+|..... ++.... +..+. +++-..-+....+..
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGk~Vl~EKP~a~~~~e~~ 108 (329)
T 3evn_A 61 DMLADESIDVIYVATINQDHY--KVAKAA---LLAGKHVLVEKPFTLTYDQAN 108 (329)
T ss_dssp HHHTCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEEESSCCSSHHHHH
T ss_pred HHhcCCCCCEEEECCCcHHHH--HHHHHH---HHCCCeEEEccCCcCCHHHHH
Confidence 4444 799999999965543 333332 22333 455444455555433
No 338
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.65 E-value=0.00029 Score=72.33 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~ 346 (733)
++|.|||+|.||.+++..|++.|. +|++++|++++++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 479999999999999999999999 99999999887544
No 339
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.64 E-value=0.0035 Score=66.88 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=61.8
Q ss_pred CcceEEEEcCCcCcHHHHHHHH-H-CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhh-ccccccCc
Q 004726 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDY 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~-~i~~~~~~ 382 (733)
+..||+|||+|.||...+..+. + .+++|+ ++|+++++++...+. .+ .....+++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~g~~~~~~~~~ 79 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------------------YAIEAKDYNDY 79 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------------------HTCCCEEESSH
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------------------hCCCCeeeCCH
Confidence 3458999999999999999998 4 477866 799999887664321 11 12334555
Q ss_pred -cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHH
Q 004726 383 -SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (733)
Q Consensus 383 -~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l 431 (733)
+.++ ++|+|++|+|..... ++..... ..+. +++-..-+....+.
T Consensus 80 ~~ll~~~~~D~V~i~tp~~~h~--~~~~~al---~aGk~Vl~EKPla~~~~e~ 127 (357)
T 3ec7_A 80 HDLINDKDVEVVIITASNEAHA--DVAVAAL---NANKYVFCEKPLAVTAADC 127 (357)
T ss_dssp HHHHHCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEEESSSCSSHHHH
T ss_pred HHHhcCCCCCEEEEcCCcHHHH--HHHHHHH---HCCCCEEeecCccCCHHHH
Confidence 3343 589999999955543 3333322 2333 44443434555443
No 340
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.62 E-value=0.0035 Score=68.77 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=60.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|.|+|+|.||.++|+.|+..|.+|+++|++++.++.+.. .+ ....+..+.+..+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv~~lee~~~~a 321 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQVLTLEDVVSEA 321 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECCGGGTTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------CccCCHHHHHHhc
Confidence 57999999999999999999999999999999987665421 11 1222222567889
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
|+|+++....--+.. +....++++.+|+...
T Consensus 322 DvVi~atG~~~vl~~----e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 322 DIFVTTTGNKDIIML----DHMKKMKNNAIVCNIG 352 (488)
T ss_dssp SEEEECSSCSCSBCH----HHHTTSCTTEEEEESS
T ss_pred CEEEeCCCChhhhhH----HHHHhcCCCeEEEEcC
Confidence 999988642222222 2344578888876433
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.61 E-value=0.0072 Score=65.70 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=36.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
.+|.|+|.|.+|..+|..|.+.|++|+++|.|++.++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 369999999999999999999999999999999988765
No 342
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.61 E-value=0.0065 Score=55.76 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=62.5
Q ss_pred ceEEEEcC----CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccc
Q 004726 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
++|+|||+ |.+|..++..|.+.|++ +|++++.. +. ...+....++++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 47999999 79999999999999997 55666542 10 012333444533
Q ss_pred -cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccC-CCCcEEE
Q 004726 385 -FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 443 (733)
Q Consensus 385 -l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~-~~~~~ig 443 (733)
...+|++|.++| .+...+++.++.+.-. ..++.. +++ .-.++.+... ..-+++|
T Consensus 74 l~~~vDlvvi~vp--~~~~~~vv~~~~~~gi-~~i~~~-~g~-~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 74 IPDKIEVVDLFVK--PKLTMEYVEQAIKKGA-KVVWFQ-YNT-YNREASKKADEAGLIIVA 129 (144)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHHHHHTC-SEEEEC-TTC-CCHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEEeC--HHHHHHHHHHHHHcCC-CEEEEC-CCc-hHHHHHHHHHHcCCEEEc
Confidence 357999999999 5667777777655432 345432 333 3334444332 2334554
No 343
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.61 E-value=0.0046 Score=65.54 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=60.6
Q ss_pred ceEEEEcCCcCcHHHHHHHH-H-CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhh-ccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~-~i~~~~~~-~ 383 (733)
.||+|||+|.||..++..+. + .+++|+ ++|+++++++...+. .+ .....+++ +
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~----------------------~g~~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQ----------------------YQLNATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHH----------------------TTCCCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------------------hCCCCeeeCCHHH
Confidence 48999999999999999998 4 477766 789999887664221 11 12344555 3
Q ss_pred ccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHH
Q 004726 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (733)
Q Consensus 384 ~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l 431 (733)
.++ ++|+|++|+|..... ++.... +..+. +++-..-+....+.
T Consensus 61 ll~~~~~D~V~i~tp~~~h~--~~~~~a---l~~Gk~vl~EKP~a~~~~e~ 106 (344)
T 3mz0_A 61 LLADENVDAVLVTSWGPAHE--SSVLKA---IKAQKYVFCEKPLATTAEGC 106 (344)
T ss_dssp HHHCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEECSCSCSSHHHH
T ss_pred HhcCCCCCEEEECCCchhHH--HHHHHH---HHCCCcEEEcCCCCCCHHHH
Confidence 444 499999999955543 333332 22333 44433334555443
No 344
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.60 E-value=0.0023 Score=68.35 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=60.5
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
+..||+|||+|.||.. ++..+.+. +.+|+ ++|+++++++...+ . .+.....+++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~-----------~-----------~~~~~~~~~~~ 61 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHR-----------F-----------ISDIPVLDNVP 61 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGG-----------T-----------SCSCCEESSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------h-----------cCCCcccCCHH
Confidence 3458999999999985 88888776 67876 88999988665311 1 1123345565
Q ss_pred cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+.++ +.|+|++|+| ...-.++..+.. ..+. +++-..-+....+..
T Consensus 62 ~ll~~~~vD~V~i~tp--~~~H~~~~~~al---~aGkhVl~EKPla~~~~e~~ 109 (359)
T 3m2t_A 62 AMLNQVPLDAVVMAGP--PQLHFEMGLLAM---SKGVNVFVEKPPCATLEELE 109 (359)
T ss_dssp HHHHHSCCSEEEECSC--HHHHHHHHHHHH---HTTCEEEECSCSCSSHHHHH
T ss_pred HHhcCCCCCEEEEcCC--cHHHHHHHHHHH---HCCCeEEEECCCcCCHHHHH
Confidence 3343 5699999999 433334433332 2333 444333345544433
No 345
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.59 E-value=0.0028 Score=64.03 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCCh
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (733)
++|.|||+|.+|+.+|..|++.|. +|+++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 479999999999999999999997 899999997
No 346
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.57 E-value=0.0021 Score=66.22 Aligned_cols=42 Identities=14% Similarity=0.261 Sum_probs=37.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~ 350 (733)
+++.|+|+|.+|.+++..|++.|. +|++++|++++++...+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~ 170 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 579999999999999999999998 799999999988765443
No 347
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.54 E-value=0.0043 Score=63.38 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=36.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~ 348 (733)
+++.|+|+|.+|.+++..|++.|. +|++++|++++++...
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la 161 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALR 161 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 589999999999999999999996 9999999998877654
No 348
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.47 E-value=0.0021 Score=69.84 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=49.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cccC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (733)
++|+|||+|.||..+++.+...|. +|+++|+++++++...+.+ |. ..+. ..++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 479999999999999999999998 9999999998764332111 10 0011 1122 4457
Q ss_pred CCCEEEEeccCCh
Q 004726 387 DVDMVIEAVIESV 399 (733)
Q Consensus 387 ~aDlVI~avpe~~ 399 (733)
++|+||+|++...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999997543
No 349
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.46 E-value=0.0061 Score=63.49 Aligned_cols=84 Identities=14% Similarity=0.073 Sum_probs=49.5
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++. .|. .....+++...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~-----------~~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ-----------PFRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT-----------TSCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC-----------CcCCHHHHHhC
Confidence 35899999999999999999874 67887 78999875432 110 01112333333
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEe
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (733)
.++|+||+|+| ...-.++... .+..+.-+++
T Consensus 64 ~~~DvViiatp--~~~h~~~~~~---al~aG~~Vi~ 94 (304)
T 3bio_A 64 ESVDVALVCSP--SREVERTALE---ILKKGICTAD 94 (304)
T ss_dssp SSCCEEEECSC--HHHHHHHHHH---HHTTTCEEEE
T ss_pred CCCCEEEECCC--chhhHHHHHH---HHHcCCeEEE
Confidence 78999999999 3333343333 3344554443
No 350
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.45 E-value=0.019 Score=63.85 Aligned_cols=164 Identities=13% Similarity=0.107 Sum_probs=100.9
Q ss_pred EEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004726 18 ITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (733)
Q Consensus 18 i~l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (733)
|.-|+|. .-+++++..+.+.++++.+.+. .+-+|.|.-.+. |..|.+-++. ........++ ..+.
T Consensus 329 via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~G-~~~G~~~E~~----------G~~~~~Ak~l-~~~~ 395 (522)
T 1x0u_A 329 IVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTPG-YVPGTDQEYK----------GIIRHGAKML-YAFA 395 (522)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCSHHHHHT----------THHHHHHHHH-HHHH
T ss_pred EEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCCC-CCCchHHHHH----------HHHHHHHHHH-HHHH
Confidence 3334553 2689999999999999988754 567777764432 3333221111 1112233455 5688
Q ss_pred cCCCcEEEEeCCcccchhhHHhhh----cCEEEEeCCceEeCccccCCCCCChhhhhhhccc-cCH----HHH-HHHH--
Q 004726 96 DCKKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL----SKA-IEMM-- 163 (733)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~-~G~----~~a-~~l~-- 163 (733)
....|.|++|-|.|.|||...... +|+++|.+++.+++-. .-|.+..+-+. +-. ... .++.
T Consensus 396 ~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~g-------pegaa~Il~r~~i~~~~d~~~~~~~l~~~ 468 (522)
T 1x0u_A 396 EATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTG-------PEGAVRILYRKEIQQASNPDDVLKQRIAE 468 (522)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSC-------HHHHHHHHTSSSSSSSSSSSSSSHHHHHH
T ss_pred hCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEecC-------HHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence 899999999999999998755444 9999999998887522 22222222221 110 000 0111
Q ss_pred HcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHH
Q 004726 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (733)
Q Consensus 164 ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a 201 (733)
+.-..-++..+++.|+||.|+++.++.+......+.+.
T Consensus 469 y~~~~~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~ 506 (522)
T 1x0u_A 469 YRKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLK 506 (522)
T ss_dssp HHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHh
Confidence 00112366789999999999999888776665555543
No 351
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.41 E-value=0.0052 Score=64.90 Aligned_cols=72 Identities=15% Similarity=0.015 Sum_probs=50.7
Q ss_pred cceEEEEcCCcCcH-HHHHHHHHCCCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 308 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~-~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
..||+|||+|.||. .++..+...|++| .++|+++++++...+. .+.....+++ +.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL----------------------FPSVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH----------------------STTCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHh----------------------cCCCcccCCHHHH
Confidence 34899999999996 6788787788986 5889999876654221 1123344555 33
Q ss_pred cC--CCCEEEEeccCChHH
Q 004726 385 FK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 385 l~--~aDlVI~avpe~~~~ 401 (733)
++ ++|+|++|+|.....
T Consensus 62 l~~~~~D~V~i~tp~~~h~ 80 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRA 80 (336)
T ss_dssp HTCTTCCEEEECSCGGGHH
T ss_pred hhCCCCCEEEEeCChhhHH
Confidence 44 699999999965553
No 352
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.31 E-value=0.0053 Score=63.36 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=50.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|.|+|+|.||.++|..|++.| +|++++|+.++++...+.+... .... . . -.+..++-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~----~~~~---~---~---~~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK----LNKK---F---G---EEVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH----HTCC---H---H---HHEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhh----cccc---c---c---eeEEEeeHHHhhCCC
Confidence 47999999999999999999999 9999999998876654433210 0000 0 0 001111113567889
Q ss_pred CEEEEecc
Q 004726 389 DMVIEAVI 396 (733)
Q Consensus 389 DlVI~avp 396 (733)
|+||.+++
T Consensus 195 DilVn~ag 202 (287)
T 1nvt_A 195 DIIINATP 202 (287)
T ss_dssp CEEEECSC
T ss_pred CEEEECCC
Confidence 99999987
No 353
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.31 E-value=0.0036 Score=64.22 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=35.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~ 347 (733)
+++.|+|+|.+|.+++..|++.|. +|++++|+.++++..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999998 999999999876653
No 354
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.29 E-value=0.0045 Score=66.25 Aligned_cols=69 Identities=26% Similarity=0.241 Sum_probs=48.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc--Cc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL--DY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~--~~-~~l 385 (733)
+||.|||+|.+|+.+|..|++ .++|++.|++.++++++.+. ...- .+...+ .+ +.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~--------~~~~------------~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF--------ATPL------------KVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT--------SEEE------------ECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc--------CCcE------------EEecCCHHHHHHHH
Confidence 379999999999999998865 58999999999887764221 0000 011111 11 346
Q ss_pred CCCCEEEEeccCC
Q 004726 386 KDVDMVIEAVIES 398 (733)
Q Consensus 386 ~~aDlVI~avpe~ 398 (733)
+++|+||.|+|..
T Consensus 76 ~~~DvVi~~~p~~ 88 (365)
T 3abi_A 76 KEFELVIGALPGF 88 (365)
T ss_dssp TTCSEEEECCCGG
T ss_pred hCCCEEEEecCCc
Confidence 8999999999854
No 355
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.27 E-value=0.0018 Score=70.18 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
.+|+|||+|.+|..+++.+...|.+|+++|++++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 489999999999999999999999999999999887664
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.21 E-value=0.003 Score=67.58 Aligned_cols=40 Identities=28% Similarity=0.338 Sum_probs=37.0
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (733)
++|.|+|+|.+|..+++.+...|.+|+++|+++++++.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~ 207 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE 207 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 6899999999999999999999999999999999877653
No 357
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.13 E-value=0.074 Score=59.15 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=86.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++.....+.+..+++.+.+. .+-+|.|.-.| |+-+.+-... ...+.+...+.. ......|+|++
T Consensus 111 gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dSg-----GAR~qeg~~~-----l~g~~~~~~~~~---~~s~~iP~Isv 176 (527)
T 1vrg_A 111 GGSLGEMHAKKIVKLLDLALKM-GIPVIGINDSG-----GARIQEGVDA-----LAGYGEIFLRNT---LASGVVPQITV 176 (527)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC-----SBCGGGTHHH-----HHHHHHHHHHHH---HHTTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----CCCccchhHH-----HHHHHHHHHHHH---HhCCCCCEEEE
Confidence 4789999999999999988765 45567776433 3333321110 001111111111 22456999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCC-ceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCCCHH-----H--HHH
Q 004726 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----E--GWK 176 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i~a~-----e--A~~ 176 (733)
|.|.|.|||......||++|+.++ +.+++ .|+..... .+|+.++.+ + +.+
T Consensus 177 v~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi~~--~~ge~v~~e~lggae~~~~~ 234 (527)
T 1vrg_A 177 IAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVIKA--VTGEEISQEDLGGAMVHNQK 234 (527)
T ss_dssp EEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHHBHHHHHHT
T ss_pred EeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHHHH--HhCCCCCccccccHHHHhhc
Confidence 999999999988889999999987 66443 23222221 457777764 2 226
Q ss_pred cCCccEEcCcc-hHHHHHHHHH
Q 004726 177 LGLIDAVVTSE-ELLKVSRLWA 197 (733)
Q Consensus 177 ~Glv~~vv~~~-~l~~~a~~~a 197 (733)
.|++|.+++++ ++.+.+.++.
T Consensus 235 ~G~vd~vv~d~~~~~~~~~~~L 256 (527)
T 1vrg_A 235 SGNAHFLADNDEKAMSLVRTLL 256 (527)
T ss_dssp SCCCSEEESSHHHHHHHHHHHH
T ss_pred ccceEEEecCHHHHHHHHHHHH
Confidence 89999999853 4545444443
No 358
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.13 E-value=0.0032 Score=65.68 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCC---hHHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~e~~~~~~~ 349 (733)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~ 199 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVE 199 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHH
Confidence 579999999999999999999998 89999999 666665433
No 359
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.12 E-value=0.016 Score=61.89 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=59.5
Q ss_pred cceEEEEcCCcCcHHHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
..||+|||+|.||..++..+.+. ++++ .++|+++++++...+. .| +. ......+++ +.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~----------~~-~~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----------NN-YP--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------TT-CC--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CC--------CCCeeeCCHHHH
Confidence 35899999999999999999875 5666 5889999876553221 01 00 012334455 33
Q ss_pred cC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHH
Q 004726 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (733)
Q Consensus 385 l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (733)
++ ++|+|++|+|..... ++..+ .+..+. +++-...+....+
T Consensus 67 l~~~~~D~V~i~tp~~~h~--~~~~~---al~aGk~V~~EKP~a~~~~e 110 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLHV--EWAIK---AAEKGKHILLEKPVAMNVTE 110 (362)
T ss_dssp HHCTTCCEEEECCCGGGHH--HHHHH---HHTTTCEEEECSSCSSSHHH
T ss_pred hcCCCCCEEEEcCChHHHH--HHHHH---HHHCCCeEEEecCCcCCHHH
Confidence 43 699999999955442 33332 334454 4433223455543
No 360
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.11 E-value=0.01 Score=64.54 Aligned_cols=153 Identities=18% Similarity=0.132 Sum_probs=81.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCC----CHHHHHHH--hhcccccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKL----TQDKANNA--LKMLKGVL 380 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~----~~~~~~~~--~~~i~~~~ 380 (733)
-||||||+|.||..++..+.+. +.+| .++|+++++++.+.+.. +. ....+ +..+.... .+....++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~---yG---~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTA---YG---DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHH---HS---SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh---cC---CccccccccchhhhhhhhccCCceEEC
Confidence 3799999999999999888754 5564 57899999877653321 00 00000 11111111 12345567
Q ss_pred Cc-cccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH---HHhcccCCCCcEEEEecCCCCCCCC
Q 004726 381 DY-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP 454 (733)
Q Consensus 381 ~~-~~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~~~~ig~h~~~p~~~~~ 454 (733)
|+ +.++ +.|+|++|+|....-..-... .+..+.=|++........ ++.+.......+
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~----AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv------------- 160 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIA----AIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI------------- 160 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHH----HHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC-------------
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHH----HHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe-------------
Confidence 77 3444 689999999742111222222 223344333211222221 222221111111
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004726 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (733)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 487 (733)
+.......+.....+.++.+.+|..++.++
T Consensus 161 ---l~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 ---YSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ---EEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---eeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 112222347778889999999999999996
No 361
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.11 E-value=0.0021 Score=67.71 Aligned_cols=95 Identities=19% Similarity=0.150 Sum_probs=62.0
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHCCC--e-----eEEEeCCh--HHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc
Q 004726 309 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~G~--~-----V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (733)
.||+|+| +|.+|.++|..|+..|. + ++++|+++ +.++.....+ .+.... ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL--------~~~~~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL--------QDCALP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH--------HHTCCT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhh--------Hhhhhc------ccCCEEE
Confidence 4899999 79999999999999886 5 99999975 2332211111 111000 0122333
Q ss_pred ccC-ccccCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCe
Q 004726 379 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHC 417 (733)
Q Consensus 379 ~~~-~~~l~~aDlVI~av--pe------------~~~~k~~v~~~l~~~~~~~~ 417 (733)
+++ ++++++||+||.+. |. +..+.+.+...+.++.+++.
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~ 123 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 123 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 443 47899999999876 21 34566677778888887775
No 362
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.07 E-value=0.014 Score=59.46 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=52.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|+|+|-.+++++..|++.|. +|++++|+.++.+...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 579999999999999999999996 8999999999887754432211 112223334456788
Q ss_pred CCEEEEecc
Q 004726 388 VDMVIEAVI 396 (733)
Q Consensus 388 aDlVI~avp 396 (733)
+|+||.|.|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 363
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.07 E-value=0.0034 Score=67.70 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
.+|+|+|+|.+|..+++.+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999998876654
No 364
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.07 E-value=0.003 Score=69.53 Aligned_cols=39 Identities=18% Similarity=0.160 Sum_probs=35.6
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
.++|.|+|+|.||..++..|++.|++|+++|+++++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 468999999999999999999999999999999887654
No 365
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.06 E-value=0.015 Score=59.40 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.3
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
++||.|.|+|.+|+.++..|++.|++|++.+|+++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 468999999999999999999999999999999876544
No 366
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.99 E-value=0.012 Score=63.86 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.0
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCC---CeeEEEeCChHHHHHHHHH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G---~~V~~~d~~~e~~~~~~~~ 350 (733)
|+||+|+|+|.+|..++..|++.| .+|+++|++.+++++..+.
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~ 46 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS 46 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH
Confidence 468999999999999999999998 3999999999988775443
No 367
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.98 E-value=0.022 Score=62.28 Aligned_cols=77 Identities=16% Similarity=0.077 Sum_probs=50.9
Q ss_pred CCcceEEEEcCCcCcH-HHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 306 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~-~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
++..||+|||+|.||. .++..+.+. +++| .++|+++++++...+. .| +.. ..+...+++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----------YG-VDP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----------TT-CCG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CCc-------ccccccCCH
Confidence 3445899999999997 899988775 5675 5889999876653221 11 000 012234555
Q ss_pred -cccC--CCCEEEEeccCChH
Q 004726 383 -SEFK--DVDMVIEAVIESVP 400 (733)
Q Consensus 383 -~~l~--~aDlVI~avpe~~~ 400 (733)
+.++ ++|+|++|+|....
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEcCCchhH
Confidence 4444 79999999996544
No 368
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.96 E-value=0.0082 Score=59.75 Aligned_cols=38 Identities=16% Similarity=-0.042 Sum_probs=34.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|+|+|.+|..+|..|.+.|+ |+++|++++.++.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 579999999999999999999999 99999999887653
No 369
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.95 E-value=0.011 Score=62.83 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCcceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
++|-||||||+|.||.. .+..+.+. +.+|+ ++|++++++++..++ .+.-...+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------------------FSVPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------------------HTCSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------------------cCCCeeeCCH
Confidence 45679999999999975 56666665 67776 789999987765321 1222345566
Q ss_pred c-cc--CCCCEEEEeccCChHH
Q 004726 383 S-EF--KDVDMVIEAVIESVPL 401 (733)
Q Consensus 383 ~-~l--~~aDlVI~avpe~~~~ 401 (733)
+ .+ .+.|+|+.|+|.....
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEeCCCchhH
Confidence 3 33 4689999999965553
No 370
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.94 E-value=0.013 Score=62.21 Aligned_cols=105 Identities=14% Similarity=0.149 Sum_probs=62.4
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHCCC-----eeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccc-cC
Q 004726 309 RKVAVIG-GGLMGSGIATAHILNNI-----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LD 381 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~G~-----~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~ 381 (733)
.||+||| +|.+|.++|..++..+. +|.++|.+.+..+...+...-. +.++... .+..+..+ .+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD----L~h~~~p------~~~~v~i~~~~ 102 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME----LEDSLYP------LLREVSIGIDP 102 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH----HHTTTCT------TEEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh----HHhhhhh------hcCCcEEecCC
Confidence 5899999 79999999999999875 3888776544322222111101 1111100 01123333 34
Q ss_pred ccccCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 382 YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 382 ~~~l~~aDlVI~av--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
++++++||+||.+. |- +..+.+.+...+.++..++++++..|
T Consensus 103 y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 68999999999875 21 23444555556777756777665444
No 371
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.93 E-value=0.011 Score=58.06 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=34.1
Q ss_pred cceEEEEcC-CcCcHHHHHHHH-HCCCeeEEEeCChH-HHHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 346 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~-~~G~~V~~~d~~~e-~~~~ 346 (733)
|++|.|.|+ |.+|..++..|+ +.|++|++.+|+++ +++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 456999995 999999999999 89999999999988 6543
No 372
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.90 E-value=0.038 Score=54.43 Aligned_cols=130 Identities=12% Similarity=0.141 Sum_probs=77.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCCC
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (733)
++|.|||+|.+|..-+..|+++|.+|++++.+.... +..+.+.+.++ .+...-..+.+.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~----------l~~l~~~~~i~---------~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAE----------INEWEAKGQLR---------VKRKKVGEEDLLNV 92 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHH----------HHHHHHTTSCE---------EECSCCCGGGSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH----------HHHHHHcCCcE---------EEECCCCHhHhCCC
Confidence 589999999999999999999999999999764321 11122333221 11111122568899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEEecCCCC--CCCCeeEEecCCCCCH
Q 004726 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTSA 466 (733)
Q Consensus 389 DlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~~~ig~h~~~p~--~~~~lveiv~~~~t~~ 466 (733)
|+||.|. ++.++...+.. .++.+..+ |...-+ +. ..|+.|. ..++++-.|.+...+|
T Consensus 93 dLVIaAT-~d~~~N~~I~~----~ak~gi~V--NvvD~p-----------~~---~~f~~Paiv~rg~l~iaIST~G~sP 151 (223)
T 3dfz_A 93 FFIVVAT-NDQAVNKFVKQ----HIKNDQLV--NMASSF-----------SD---GNIQIPAQFSRGRLSLAISTDGASP 151 (223)
T ss_dssp SEEEECC-CCTHHHHHHHH----HSCTTCEE--EC----------------C---CSEECCEEEEETTEEEEEECTTSCH
T ss_pred CEEEECC-CCHHHHHHHHH----HHhCCCEE--EEeCCc-----------cc---CeEEEeeEEEeCCEEEEEECCCCCc
Confidence 9999764 56666555433 34434332 222111 00 1122222 3346666677777899
Q ss_pred HHHHHHHHHHHH
Q 004726 467 QVILDLMTVGKI 478 (733)
Q Consensus 467 e~~~~~~~l~~~ 478 (733)
.....+++-++.
T Consensus 152 ~la~~iR~~ie~ 163 (223)
T 3dfz_A 152 LLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988888887765
No 373
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.87 E-value=0.017 Score=60.83 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=59.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCC---Ce-eEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G---~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
.||+|||+|.||...+..+.+.+ ++ |.++|+++++++...+. .+.-...+++ +
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK----------------------HDIPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH----------------------HTCSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHH
Confidence 48999999999999999987654 34 45789999887664321 1111234555 3
Q ss_pred ccC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 384 ~l~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
.++ ++|+|++|+|..... ++..+.. ..+. +++-..-+....+..
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~al---~~GkhVl~EKP~a~~~~e~~ 107 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLCL---AAGKAVLCEKPMGVNAAEVR 107 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHHH---HTTCEEEEESSSSSSHHHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHHH---hcCCEEEEECCCCCCHHHHH
Confidence 343 699999999965553 3333322 2333 455444445554433
No 374
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.83 E-value=0.051 Score=53.73 Aligned_cols=38 Identities=18% Similarity=0.065 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 57999998 999999999999999999999999987654
No 375
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.80 E-value=0.044 Score=58.34 Aligned_cols=97 Identities=7% Similarity=0.098 Sum_probs=59.9
Q ss_pred ceEEEEcCCcCcH-HHHHHHHHCCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~-~iA~~l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
-||||||+|.+|. .++..+...+.+|+ ++|+++++++...+. .+.....+++ +.+
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAV----------------------YADARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------------------SSSCCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHHHh
Confidence 4899999999995 57777777889855 889999987664321 1223345565 334
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHHh
Q 004726 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIVG 432 (733)
Q Consensus 386 ~--~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l~ 432 (733)
+ +.|+|++|+|.. .-.++..... ..+. +++-.--+....+..
T Consensus 85 ~~~~vD~V~I~tp~~--~H~~~~~~al---~aGkhVl~EKPla~~~~ea~ 129 (361)
T 3u3x_A 85 EDENIGLIVSAAVSS--ERAELAIRAM---QHGKDVLVDKPGMTSFDQLA 129 (361)
T ss_dssp TCTTCCEEEECCCHH--HHHHHHHHHH---HTTCEEEEESCSCSSHHHHH
T ss_pred cCCCCCEEEEeCChH--HHHHHHHHHH---HCCCeEEEeCCCCCCHHHHH
Confidence 3 589999999943 3334433332 2333 454444345554433
No 376
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.78 E-value=0.0023 Score=65.39 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=58.4
Q ss_pred CcceEEEEc-CCcCcHHHHHHHHHC-CCeeEE-EeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG-~G~mG~~iA~~l~~~-G~~V~~-~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
++.||+|+| .|.||..++..+.+. +++++. +|++.+... + .+.+.+. .....+..++++
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~-G-----------~d~gel~-----g~~~gv~v~~dl~ 68 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQL-G-----------QDAGAFL-----GKQTGVALTDDIE 68 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTT-T-----------SBTTTTT-----TCCCSCBCBCCHH
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccc-c-----------ccHHHHh-----CCCCCceecCCHH
Confidence 457999999 799999999988865 677775 688753210 0 0001000 000123345555
Q ss_pred cccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHH
Q 004726 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (733)
Q Consensus 383 ~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~ 429 (733)
+.+.++|+||++.+ ++...+...... ..+.-+++.|++++..
T Consensus 69 ~ll~~~DVVIDfT~--p~a~~~~~~~al---~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 69 RVCAEADYLIDFTL--PEGTLVHLDAAL---RHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHCSEEEECSC--HHHHHHHHHHHH---HHTCEEEECCCCCCHH
T ss_pred HHhcCCCEEEEcCC--HHHHHHHHHHHH---HcCCCEEEECCCCCHH
Confidence 44678999999986 554444444333 3344444555555443
No 377
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.77 E-value=0.011 Score=61.44 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=34.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCC---hHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~e~~~~~~ 348 (733)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la 192 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH
Confidence 579999999999999999999998 89999999 66555543
No 378
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.76 E-value=0.1 Score=58.12 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=100.5
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCC
Q 004726 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (733)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 98 (733)
|+|.. -.++++-.....+.++.+++ ..+-+|.|.-. +.|..|.+-+.. ........++ ..+....
T Consensus 337 ~~~~~~~G~~~~~~~~Kaar~i~~a~~-~~~Plv~lvDt-pG~~~G~~~E~~----------g~~~~~A~~~-~a~~~~~ 403 (527)
T 1vrg_A 337 NQPSVLAGVLDIDSSDKAARFIRFLDA-FNIPILTFVDT-PGYLPGVAQEHG----------GIIRHGAKLL-YAYSEAT 403 (527)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred EcCcccCCCCCHHHHHHHHHHHHHHhh-cCCCeEEEecC-CCCcCchhhHHh----------HHHHHHHHHH-HHHhcCC
Confidence 45532 67999999999999988864 45666776432 234444332211 1222333555 5678899
Q ss_pred CcEEEEeCCcccchhhHHhhh----cCEEEEeCCceEeCccccCCCCCChhhhhhhcccc-----CHHHHHH-HH--HcC
Q 004726 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MM--LLS 166 (733)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~-----G~~~a~~-l~--ltG 166 (733)
.|+|++|-|.|.|||..-... +|+++|.++++++ .++.-|.+..+-+.- .+...++ +. +.-
T Consensus 404 vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 476 (527)
T 1vrg_A 404 VPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQ 476 (527)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999887644433 8998888887776 444444444443321 1111111 22 112
Q ss_pred CCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHH
Q 004726 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (733)
Q Consensus 167 ~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a 201 (733)
..-++..+.+.|+||.|+++.++........+.+.
T Consensus 477 ~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~ 511 (527)
T 1vrg_A 477 QFANPYIAASRGYVDMVIDPRETRKYIMRALEVCE 511 (527)
T ss_dssp HTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred hhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHh
Confidence 23677889999999999999887665555555443
No 379
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.75 E-value=0.01 Score=63.21 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=48.1
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
++.||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ ....+...+++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~~ 58 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------------------DFPDAEVVHELE 58 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------------------HCTTSEEESSTH
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------------------hCCCCceECCHH
Confidence 3458999999999997 66666654 67765 78999865221 01123445566
Q ss_pred cccC--CCCEEEEeccCChHH
Q 004726 383 SEFK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~~ 401 (733)
+.++ ++|+|++|+|.....
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 59 EITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp HHHTCTTCCEEEECSCTTTHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH
Confidence 4444 799999999976654
No 380
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.67 E-value=0.0071 Score=61.82 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=28.9
Q ss_pred cceEEEEcC-CcCcHHHHHHHHH-CCCeeE-EEeCChH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSE 342 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~-~G~~V~-~~d~~~e 342 (733)
..||+|+|+ |.||..++..+.+ .|++|+ ++|++++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~ 42 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS 42 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCch
Confidence 358999998 9999999998774 578887 7788764
No 381
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.66 E-value=0.009 Score=61.20 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=53.6
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|||.|. +|.++|..|++.|.+|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 5799999876 7999999999999999999985433220 023578
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+++-..-++. ..+++++++++..+
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEec
Confidence 9999999984222222 34688988876443
No 382
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.66 E-value=0.018 Score=63.56 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=36.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (733)
+||-|+|+|.+|..+|..|...|++|+++|.|++.++++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4799999999999999999999999999999999987753
No 383
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.0077 Score=66.51 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.0
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHC-CCeeEEEeCChHHHHHH
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~-G~~V~~~d~~~e~~~~~ 347 (733)
++++|.|+|+|.+|++++..|++. |++|+++||++++++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 357899999999999999999998 78999999999876653
No 384
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.64 E-value=0.012 Score=62.84 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=47.8
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
++.||+|||+|.||.. .+..+.+. +++|+ ++|+++++++.. .......+++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------------------~~~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------------------LPDVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------------------CTTSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------------------CCCCcEECCHH
Confidence 3458999999999997 66666665 77875 889998764310 1123345565
Q ss_pred cccC--CCCEEEEeccCChHH
Q 004726 383 SEFK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 383 ~~l~--~aDlVI~avpe~~~~ 401 (733)
+.++ ++|+|++|+|.....
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H~ 81 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATHA 81 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGHH
T ss_pred HHhcCCCCCEEEEeCChHHHH
Confidence 3444 799999999965553
No 385
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.63 E-value=0.0084 Score=62.87 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=56.3
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-ccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (733)
.||+|||+|.||..++..+.+. +.++ .++|++++. +. . . .+..++++ +.+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~------------~-gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------K------------T-PVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------S------------S-CEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------c------------C-CCceeCCHHHHh
Confidence 4799999999999999999877 5665 588988654 10 0 0 12334455 334
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCCHHHH
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~l 431 (733)
.++|+||+|+|..... +.+...+..+. ++++...+..+.++
T Consensus 57 ~~~DvViiatp~~~h~-----~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 57 DDVDVLFLCMGSATDI-----PEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTCSEEEECSCTTTHH-----HHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred cCCCEEEEcCCcHHHH-----HHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 7899999999865432 22223334454 44433334445444
No 386
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.62 E-value=0.0064 Score=61.49 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=52.9
Q ss_pred ceEEEEcCC-cCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G-~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|||.| .+|.++|..|.+.|.+|++++++...++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 479999997 5899999999999999999987533222 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+++-..-++. ..+++++++++..+
T Consensus 194 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 223 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLNR-------EMVTPGSVVIDVGI 223 (276)
T ss_dssp SSEEEECSSCTTCBCG-------GGCCTTCEEEECCC
T ss_pred CCEEEECCCCCccccH-------hhccCCcEEEEecc
Confidence 9999999974222222 34688888876443
No 387
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.60 E-value=0.011 Score=64.39 Aligned_cols=70 Identities=20% Similarity=0.199 Sum_probs=49.5
Q ss_pred eEEEEcCCcCcHHHHHHHHHC---------CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccc
Q 004726 310 KVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (733)
||||||+|.||...+..+.+. +.+|+ ++|++++++++..+. .+.....
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~----------------------~~~~~~y 85 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAK----------------------LGAEKAY 85 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEEE
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCeEE
Confidence 799999999999988888764 34555 779999987765332 1222344
Q ss_pred cCc-ccc--CCCCEEEEeccCChHH
Q 004726 380 LDY-SEF--KDVDMVIEAVIESVPL 401 (733)
Q Consensus 380 ~~~-~~l--~~aDlVI~avpe~~~~ 401 (733)
+|+ +.+ .+.|+|+.|+|.....
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp~~~H~ 110 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSPNHLHY 110 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHH
Confidence 565 334 4689999999965554
No 388
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.55 E-value=0.0048 Score=60.65 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=33.8
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
||.|.|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6999998 999999999999999999999999887553
No 389
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.49 E-value=0.02 Score=62.88 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=51.6
Q ss_pred CcceEEEEcCCcCcHHHHHHHHHC-CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc----
Q 004726 307 GVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL---- 380 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~---- 380 (733)
+..||+|||+|.||...+..+.+. |++| .++|+++++++...+.+. +.|. ......+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~~ 81 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGND 81 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSSTT
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCCC
Confidence 345899999999999999988875 6776 488999998776543211 1110 0122233
Q ss_pred Cc-cccC--CCCEEEEeccCChH
Q 004726 381 DY-SEFK--DVDMVIEAVIESVP 400 (733)
Q Consensus 381 ~~-~~l~--~aDlVI~avpe~~~ 400 (733)
++ +.++ ++|+|++|+|....
T Consensus 82 ~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 82 DYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp THHHHTTCTTCCEEEECCCGGGH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH
Confidence 55 3444 68999999996554
No 390
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.45 E-value=0.036 Score=55.83 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=29.9
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCCh
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (733)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 479999999999999999999997 789998764
No 391
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.43 E-value=0.021 Score=55.67 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=33.6
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
||.|+|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 6999996 999999999999999999999999877553
No 392
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.42 E-value=0.014 Score=59.67 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=53.5
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
++|.|||.|. +|..+|..|...|.+|++++++...+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 5899999995 799999999999999999985533221 35688
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+++-.--++. ..++++++|++...
T Consensus 209 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 238 (301)
T 1a4i_A 209 GDILVVATGQPEMVKG-------EWIKPGAIVIDCGI 238 (301)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCcccCCH-------HHcCCCcEEEEccC
Confidence 9999999974222222 23678888876544
No 393
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.36 E-value=0.039 Score=60.48 Aligned_cols=72 Identities=15% Similarity=0.065 Sum_probs=49.8
Q ss_pred cceEEEEcC----CcCcHHHHHHHHHC--CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 308 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~l~~~--G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
..||+|||+ |.||...+..|.+. +++| .++|+++++++...+. .|. ..+...+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g~----------~~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR----------LKL----------SNATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------TTC----------TTCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cCC----------CcceeeC
Confidence 358999999 99999999999886 6776 5889999887654221 010 0112345
Q ss_pred Cc-cccC--CCCEEEEeccCCh
Q 004726 381 DY-SEFK--DVDMVIEAVIESV 399 (733)
Q Consensus 381 ~~-~~l~--~aDlVI~avpe~~ 399 (733)
++ +.++ ++|+|++|+|...
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~~ 101 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVAS 101 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHHH
T ss_pred CHHHHhcCCCCCEEEEeCCcHH
Confidence 55 3343 6999999999443
No 394
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.35 E-value=0.031 Score=58.68 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=32.3
Q ss_pred CcceEEEEcCCcCcHH-HHHHHHHCCCeeEEEeCChH
Q 004726 307 GVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~l~~~G~~V~~~d~~~e 342 (733)
.++||.|||.|.+|.+ +|..|++.|++|+++|.++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3579999999999996 99999999999999998753
No 395
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.29 E-value=0.0086 Score=58.94 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.8
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~ 344 (733)
|++|.|.|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999996 9999999999999999999999998754
No 396
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.27 E-value=0.028 Score=60.54 Aligned_cols=69 Identities=14% Similarity=0.025 Sum_probs=49.4
Q ss_pred ceEEEEcCC-cCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 309 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 309 ~kI~VIG~G-~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
.||+|||+| .||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-----------------------GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-----------------------TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-----------------------CCCeECCHHHH
Confidence 479999999 9999999998875 56665 7899998876543210 12334555 33
Q ss_pred cC--CCCEEEEeccCChH
Q 004726 385 FK--DVDMVIEAVIESVP 400 (733)
Q Consensus 385 l~--~aDlVI~avpe~~~ 400 (733)
++ ++|+|++|+|....
T Consensus 60 l~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp HHHSCCSEEEECSCGGGH
T ss_pred HcCCCCCEEEEcCCcHHH
Confidence 43 59999999996544
No 397
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.26 E-value=0.014 Score=62.25 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=48.1
Q ss_pred CCcceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
+++-||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ ..+.+...+++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~ 57 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVRSF 57 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEESCS
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceECCH
Confidence 34568999999999997 67777665 77775 78998765211 01123445666
Q ss_pred -cccC--CCCEEEEeccCChHH
Q 004726 383 -SEFK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 383 -~~l~--~aDlVI~avpe~~~~ 401 (733)
+.++ ++|+|++|+|.....
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H~ 79 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTPDNTHY 79 (362)
T ss_dssp HHHHTCTTCCEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEeCChHHHH
Confidence 4444 499999999965543
No 398
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.25 E-value=0.15 Score=50.95 Aligned_cols=110 Identities=18% Similarity=0.164 Sum_probs=78.3
Q ss_pred ccccccC-ccccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHhcc---cCCC-CcEEEEecCCC
Q 004726 375 MLKGVLD-YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK---TSSQ-DRIIGAHFFSP 449 (733)
Q Consensus 375 ~i~~~~~-~~~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~---~~~~-~~~ig~h~~~p 449 (733)
.+..++| .++++++|++|.-.|..- ....+.+++.+++++++|| +||-|+++..+... +.+. ..+..+||-.-
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII-~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaV 205 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIV-THACTIPTTKFAKIFKDLGREDLNITSYHPGCV 205 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEE-EECSSSCHHHHHHHHHHTTCTTSEEEECBCSSC
T ss_pred CcEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEE-ecccCCCHHHHHHHHHHhCcccCCeeccCCCCC
Confidence 3444444 489999999999999533 2347788999999999987 46777777655443 3332 45777887554
Q ss_pred CCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004726 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (733)
Q Consensus 450 ~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 487 (733)
|....- ........++|.++++.+|.+..|+.++++.
T Consensus 206 Pgt~Gq-~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 206 PEMKGQ-VYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp TTTCCC-EEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCCCCc-cccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 433222 2334445689999999999999999999883
No 399
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.23 E-value=0.031 Score=57.53 Aligned_cols=41 Identities=20% Similarity=0.116 Sum_probs=36.3
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|+| +|.+|.+++..|++.|.+|++++|++++++...+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 4789999 8999999999999999999999999887766544
No 400
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.23 E-value=0.018 Score=58.48 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=53.2
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|||.|. +|.++|..|++.|.+|++.++....++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 5799999876 699999999999999999987543222 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+++-..-++. ..++++++|++..+
T Consensus 204 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLRS-------DMVKEGVIVVDVGI 233 (285)
T ss_dssp CSEEEECSSCTTCBCG-------GGSCTTEEEEECCC
T ss_pred CCEEEECCCCCCcCCH-------HHcCCCeEEEEecc
Confidence 9999999973222222 34688888876443
No 401
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.22 E-value=0.075 Score=55.98 Aligned_cols=108 Identities=12% Similarity=0.134 Sum_probs=59.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCC-CHHHH-HHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~-~~~~~-~~~~~~i~~~~~~-~ 383 (733)
.||||+|+|.+|..+++.+... +++|+ +.|.+++......+. +...-.|.. ..... .-.-+.+....+. +
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchHH
Confidence 5899999999999999999876 57766 446665554433210 000011222 11211 1111123333333 4
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (733)
.+.++|+|++|.|..... +... ..+++.++.++++.+.
T Consensus 78 ~~~~vDiV~eatg~~~s~--~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGK--QNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp TGGGCSEEEECCCTTHHH--HHHH--HTTTTTTCEEEECTTS
T ss_pred hccCCCEEEECCCccccH--HHHH--HHHHHCCCEEEECCCc
Confidence 457999999999854432 2211 3566777766665443
No 402
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.08 E-value=0.018 Score=59.80 Aligned_cols=91 Identities=18% Similarity=0.062 Sum_probs=57.7
Q ss_pred ceEEEEcCCcC-cHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc-----c--c
Q 004726 309 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 380 (733)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 380 (733)
++|.|||.|.| |..+|..|+..|.+|+++|++..++.. +...-. . ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--------------ra~~la----~--~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--------------RGESLK----L--NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--------------SCCCSS----C--CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--------------HHHHHh----h--hcccccccccccHh
Confidence 58999999976 999999999999999999998432110 000000 0 00111 1 2
Q ss_pred Cc-cccCCCCEEEEeccCChH-HHHHHHHHHHHhCCCCeEEEecCCCC
Q 004726 381 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 426 (733)
Q Consensus 381 ~~-~~l~~aDlVI~avpe~~~-~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (733)
++ +.+++||+||.|++-.-- +.. ..+++++++++.++.-
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~-------e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPT-------EYIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCT-------TTSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCH-------HHcCCCeEEEEcCCCc
Confidence 33 567899999999973221 222 2357888887766543
No 403
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.08 E-value=0.0089 Score=59.48 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=34.8
Q ss_pred CCCcceEEEEcC-CcCcHHHHHHHHHCC-CeeEEEeCChHHHH
Q 004726 305 PRGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYLL 345 (733)
Q Consensus 305 ~~~~~kI~VIG~-G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~ 345 (733)
++.|++|.|.|+ |.+|..++..|++.| ++|++++|+++.++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH 62 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc
Confidence 455788999995 999999999999999 89999999987643
No 404
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=95.07 E-value=0.17 Score=56.26 Aligned_cols=162 Identities=15% Similarity=0.073 Sum_probs=101.4
Q ss_pred eCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcC
Q 004726 20 LINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDC 97 (733)
Q Consensus 20 l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 97 (733)
=|+|.. -.++++-.+...+.++.+++ ..+-+|.|.-. +.|..|.+-++. ...+...+++ ..+.+.
T Consensus 332 an~~~~~~G~~~~~~a~Kaar~i~~~~~-~~iPlv~lvDt-pGf~~G~~~E~~----------Gi~~~~A~~l-~a~a~~ 398 (523)
T 1on3_A 332 ANQPSVMSGCLDINASDKAAEFVNFCDS-FNIPLVQLVDV-PGFLPGVQQEYG----------GIIRHGAKML-YAYSEA 398 (523)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHC
T ss_pred EecCCccCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeC-CCcCcchHHHHh----------hHHHHHHHHH-HHHhcC
Confidence 355542 57999999999999988864 35666766433 335555443221 1223344555 568889
Q ss_pred CCcEEEEeCCcccchhhHHhhh----cCEEEEeCCceEeCccccCCCCCChhhhhhhcccc-----CHHHHHH-HHH--c
Q 004726 98 KKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML--L 165 (733)
Q Consensus 98 ~kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~-----G~~~a~~-l~l--t 165 (733)
..|+|+.|-|.+.|||..-... +|+++|.++++++ .++.-|.+..+-+.- -....++ +.- .
T Consensus 399 ~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~ 471 (523)
T 1on3_A 399 TVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQ 471 (523)
T ss_dssp CSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHH
Confidence 9999999999999888754444 8888887777766 444444444443321 1111111 221 1
Q ss_pred CCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHH
Q 004726 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (733)
Q Consensus 166 G~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a 201 (733)
-..-++..+.+.|+||.|+++.++........+.+.
T Consensus 472 ~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~ 507 (523)
T 1on3_A 472 NAFNTPYVAAARGQVDDVIDPADTRRKIASALEMYA 507 (523)
T ss_dssp HHHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGG
T ss_pred HhhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHh
Confidence 112567889999999999999887665555554443
No 405
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.04 E-value=0.018 Score=58.52 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=52.2
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|||.|. +|.++|..|...|.+|++.++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 5799999876 799999999999999999986432221 34688
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
||+||.+++-..-++. ..+++++++++..
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvg 233 (285)
T 3l07_A 205 ADILIVAVGKPNFITA-------DMVKEGAVVIDVG 233 (285)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCcEEEEec
Confidence 9999999973222222 3468888877644
No 406
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.98 E-value=0.024 Score=56.42 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=35.9
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
.++|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 356777776 889999999999999999999999988776544
No 407
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=94.97 E-value=0.057 Score=56.63 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.1
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCC-------eeEEEeCCh
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 341 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~ 341 (733)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 47999997 9999999999999996 899999975
No 408
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.97 E-value=0.012 Score=59.95 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=52.5
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
++|.|||.|. .|..+|..|+..|.+|+++++....+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 5899999996 599999999999999999986653332 34567
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
||+||.+++..--++. ..++++++|++..
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVg 231 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVG 231 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECC
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEcc
Confidence 9999999973221222 2357888887644
No 409
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.97 E-value=0.0063 Score=59.76 Aligned_cols=78 Identities=22% Similarity=0.229 Sum_probs=46.4
Q ss_pred ceEEEEcCCcCcHHHHHH--HHHCCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 309 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~--l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
.+|+|||+|.+|..++.. +...|++++ ++|.++++..+.. .| . .+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i------------~g----------v-~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEV------------GG----------V-PVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEE------------TT----------E-EEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh------------cC----------C-eeechhhHHHH
Confidence 469999999999999994 445578765 7799987643210 00 0 11223344 34
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHH
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEK 411 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~ 411 (733)
+++.|.||+|+| ....+++...+.+
T Consensus 143 i~~~D~ViIAvP--s~~~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVP--AVAAQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HHhCCEEEEecC--chhHHHHHHHHHH
Confidence 444599999999 4444566665543
No 410
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=94.97 E-value=0.017 Score=59.05 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=35.1
Q ss_pred eEEEE-cC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 310 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 310 kI~VI-G~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
||++| |+ +-+|.++|..|++.|.+|++.|++++.+++..+.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~ 72 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE 72 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 67777 44 7799999999999999999999999988876543
No 411
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.92 E-value=0.033 Score=58.80 Aligned_cols=71 Identities=11% Similarity=-0.066 Sum_probs=50.4
Q ss_pred cceEEEEcCC-cCcHHHHHHHHHC--CCee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-
Q 004726 308 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (733)
Q Consensus 308 ~~kI~VIG~G-~mG~~iA~~l~~~--G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (733)
.-||+|||+| .||...+..+.+. +.+| .++|+++++++...+. .+.....+++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------------------VGNPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------------------HSSCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------------------hCCCcccCCHH
Confidence 3489999999 8999999999876 4666 5889999887664321 1122345555
Q ss_pred ccc--CCCCEEEEeccCChH
Q 004726 383 SEF--KDVDMVIEAVIESVP 400 (733)
Q Consensus 383 ~~l--~~aDlVI~avpe~~~ 400 (733)
+.+ .++|+|++|+|....
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGH
T ss_pred HHhcCCCCCEEEEeCCchHH
Confidence 334 368999999995544
No 412
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=94.91 E-value=0.36 Score=54.07 Aligned_cols=160 Identities=13% Similarity=0.033 Sum_probs=90.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004726 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (733)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaa 104 (733)
.-++++...+.+..+++.+.+. .+-+|.|.-.|. +.+.+-.+... ....+.+...+. ..+.....|+|++
T Consensus 119 gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgG-----Arl~~qe~~~~--~l~~~g~if~~~--~~ls~~~iP~Isv 188 (588)
T 3gf3_A 119 AGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSG-----VEFPNQDKVYP--NRRGGGTPFFRN--SELNQLGIPVIVG 188 (588)
T ss_dssp GGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGHHHHSS--STTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cCccccccccc--chhhHHHHHHHH--HHHhcCCCCEEEE
Confidence 4788888999999999988765 456777765443 33321111100 011122222222 2355678999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCCceEeCcccc--CCCCCChhhhhhhccc---cCHHHHHHHHHcCCCCCHHHHH--Hc
Q 004726 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELT--LGVIPGFGGTQRLPRL---VGLSKAIEMMLLSKSITSEEGW--KL 177 (733)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~--~Gl~P~~g~~~~l~r~---~G~~~a~~l~ltG~~i~a~eA~--~~ 177 (733)
|.|.|.|||...++++|++++.+++.+++.... -|+-|.+ . ..+.- +......+-..+.+.+...+.. ..
T Consensus 189 v~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g--~-~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~s 265 (588)
T 3gf3_A 189 IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG--Y-IDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDET 265 (588)
T ss_dssp ECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTS
T ss_pred EeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc--c-ccccchhhhhhhhccccccChhhccchhhhcccc
Confidence 999999998877888899999999988874332 1211110 0 01110 0001111111356666666666 58
Q ss_pred CCccEEcCcch-HHHHHHHHH
Q 004726 178 GLIDAVVTSEE-LLKVSRLWA 197 (733)
Q Consensus 178 Glv~~vv~~~~-l~~~a~~~a 197 (733)
|++|.++++++ ..+.++++.
T Consensus 266 Gv~d~~a~de~~al~~~r~~l 286 (588)
T 3gf3_A 266 GFFREVYQNDLGVIDGIKKYI 286 (588)
T ss_dssp CCSCEEESSHHHHHHHHHHHH
T ss_pred ccceEEeCCHHHHHHHHHHHH
Confidence 99999997653 344444443
No 413
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.90 E-value=0.096 Score=58.26 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=32.3
Q ss_pred CCCcceEEEEcCCcCcHH-HHHHHHHCCCeeEEEeCChH
Q 004726 305 PRGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 305 ~~~~~kI~VIG~G~mG~~-iA~~l~~~G~~V~~~d~~~e 342 (733)
+..+++|.|||.|..|.+ +|..|.+.|++|+++|..+.
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 345789999999999996 99999999999999998754
No 414
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.89 E-value=0.031 Score=60.39 Aligned_cols=75 Identities=20% Similarity=0.180 Sum_probs=50.8
Q ss_pred CcceEEEEcCCc---CcHHHHHHHHHCC-CeeE--EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 307 GVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 307 ~~~kI~VIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
+.-||+|||+|. ||...+..+...+ ++|+ ++|+++++++...+. -| +. .....+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~~---------~~~~~~ 70 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ----------LG-VD---------SERCYA 70 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH----------TT-CC---------GGGBCS
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH----------hC-CC---------cceeeC
Confidence 345899999999 9999998887765 6776 579999987664321 11 00 013345
Q ss_pred Cc-cccC-------CCCEEEEeccCChHH
Q 004726 381 DY-SEFK-------DVDMVIEAVIESVPL 401 (733)
Q Consensus 381 ~~-~~l~-------~aDlVI~avpe~~~~ 401 (733)
++ +.++ +.|+|+.|+|.....
T Consensus 71 ~~~~ll~~~~~~~~~vD~V~i~tp~~~H~ 99 (398)
T 3dty_A 71 DYLSMFEQEARRADGIQAVSIATPNGTHY 99 (398)
T ss_dssp SHHHHHHHHTTCTTCCSEEEEESCGGGHH
T ss_pred CHHHHHhcccccCCCCCEEEECCCcHHHH
Confidence 55 3333 499999999966553
No 415
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=94.85 E-value=0.12 Score=58.14 Aligned_cols=157 Identities=11% Similarity=0.121 Sum_probs=101.7
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEe
Q 004726 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (733)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~Iaav 105 (733)
-.++++-.....+.++.+++ .++-+|.|.-. +.|..|.+-++ .........++ ..+..+..|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDAEK----------AELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 57999999999999987764 45677777543 34655554221 12233444666 67899999999999
Q ss_pred CCcccchhhHHhhh-----c--CEEEEeCCceEeCccccCCCCCChhhhhhhccc-cCH---------HHH---HHHH--
Q 004726 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL---------SKA---IEMM-- 163 (733)
Q Consensus 106 ~G~a~GgG~~lala-----c--D~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~-~G~---------~~a---~~l~-- 163 (733)
-|.+.|||. ++++ + |+++|.++++++ .++.-|.+..+-+. .-. ..+ .++.
T Consensus 452 ~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 523 (587)
T 1pix_A 452 LRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA 523 (587)
T ss_dssp CSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHH
Confidence 999998874 4554 4 998888888777 44434444333222 110 000 1111
Q ss_pred HcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHHHccC
Q 004726 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (733)
Q Consensus 164 ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~ 204 (733)
+. +..++..|.+.|+||.|+++.+.........+.+...+
T Consensus 524 y~-~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 524 FY-TKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HH-HTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred HH-HhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 11 14789999999999999999887666655555554443
No 416
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.74 E-value=0.027 Score=56.85 Aligned_cols=82 Identities=18% Similarity=0.196 Sum_probs=52.7
Q ss_pred ceEEEE--cCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHH--hHhcCCCCHHHHHHHhhccccccCccc
Q 004726 309 RKVAVI--GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG--LVTRGKLTQDKANNALKMLKGVLDYSE 384 (733)
Q Consensus 309 ~kI~VI--G~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~--~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (733)
.|+++| |.+-+|.++|..|++.|.+|++.|++++.+++..+.+.+.-.+ .+....-++++.+.....+. +.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~-----~~ 83 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD-----AE 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH-----HT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH-----HH
Confidence 377888 5588999999999999999999999999888776554321000 01122233444444333322 33
Q ss_pred cCCCCEEEEec
Q 004726 385 FKDVDMVIEAV 395 (733)
Q Consensus 385 l~~aDlVI~av 395 (733)
+...|++|.+.
T Consensus 84 ~G~iDiLVNNA 94 (255)
T 4g81_D 84 GIHVDILINNA 94 (255)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCcEEEECC
Confidence 55677777765
No 417
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.74 E-value=0.037 Score=60.19 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=49.1
Q ss_pred ceEEEEcCCc---CcHHHHHHHHHCC-CeeE--EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc
Q 004726 309 RKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (733)
Q Consensus 309 ~kI~VIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (733)
-||+|||+|. ||...+..+...+ ++|+ ++|++++++++..++. | + ......+++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g-~---------~~~~~~~~~ 97 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------G-L---------DPSRVYSDF 97 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------T-C---------CGGGBCSCH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------C-C---------CcccccCCH
Confidence 4899999999 9999888887765 6765 6799999877643321 1 0 001234555
Q ss_pred -cccC-------CCCEEEEeccCChHH
Q 004726 383 -SEFK-------DVDMVIEAVIESVPL 401 (733)
Q Consensus 383 -~~l~-------~aDlVI~avpe~~~~ 401 (733)
+.++ +.|+|++|+|.....
T Consensus 98 ~~ll~~~~~~~~~vD~V~I~tp~~~H~ 124 (417)
T 3v5n_A 98 KEMAIREAKLKNGIEAVAIVTPNHVHY 124 (417)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCTTSHH
T ss_pred HHHHhcccccCCCCcEEEECCCcHHHH
Confidence 3333 489999999976653
No 418
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.74 E-value=0.07 Score=59.12 Aligned_cols=73 Identities=22% Similarity=0.149 Sum_probs=50.3
Q ss_pred CcceEEEEcC----CcCcHHHHHHHHHC--CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccc
Q 004726 307 GVRKVAVIGG----GLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (733)
Q Consensus 307 ~~~kI~VIG~----G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (733)
+.-||+|||+ |.||...+..|.+. +++|+ ++|+++++++...+. .| + ..+...
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~----------~g-~---------~~~~~~ 97 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQ----------LQ-L---------KHATGF 97 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHH----------TT-C---------TTCEEE
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cC-C---------Ccceee
Confidence 3458999999 99999999999886 67765 889999887664321 01 0 011234
Q ss_pred cCc-ccc--CCCCEEEEeccCCh
Q 004726 380 LDY-SEF--KDVDMVIEAVIESV 399 (733)
Q Consensus 380 ~~~-~~l--~~aDlVI~avpe~~ 399 (733)
+++ +.+ .++|+|++|+|...
T Consensus 98 ~d~~ell~~~~vD~V~I~tp~~~ 120 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVKVPE 120 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSCHHH
T ss_pred CCHHHHhcCCCCCEEEEcCCcHH
Confidence 555 334 37999999999443
No 419
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=94.72 E-value=0.2 Score=55.81 Aligned_cols=160 Identities=15% Similarity=0.130 Sum_probs=98.5
Q ss_pred eCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcC
Q 004726 20 LINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDC 97 (733)
Q Consensus 20 l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 97 (733)
=|+|.. -.++++-.+...+.++.+++. .+-+|.|--. +.|..|.+-++. ........++ ..+...
T Consensus 353 an~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~~----------Gi~~~ga~~l-~a~~~~ 419 (548)
T 2bzr_A 353 ANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEYN----------GIIRRGAKLL-YAYGEA 419 (548)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHC
T ss_pred EECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHHh----------hHHHHHHHHH-HHHhCC
Confidence 345532 689999999999999888654 5666766432 235555443221 1222333555 568889
Q ss_pred CCcEEEEeCCcccchhhHHhh----hcCEEEEeCCceEeCccccCCCCCChhhhhhhccc-cCH--------HHHHH-HH
Q 004726 98 KKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL--------SKAIE-MM 163 (733)
Q Consensus 98 ~kp~Iaav~G~a~GgG~~lal----acD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~-~G~--------~~a~~-l~ 163 (733)
..|+|++|-|.|.|||..... .+|+++|.++++++ .++.-|.+..+-+. +-. ...++ +.
T Consensus 420 ~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~ 492 (548)
T 2bzr_A 420 TVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQ 492 (548)
T ss_dssp CSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC----------CHHHHHHHH
T ss_pred CCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHH
Confidence 999999999999988875443 48999888888776 44334444444332 111 11111 21
Q ss_pred H--cCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHH
Q 004726 164 L--LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALD 199 (733)
Q Consensus 164 l--tG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ 199 (733)
- .-..-++..+.+.|+||.|+++.+.........+.
T Consensus 493 ~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~ 530 (548)
T 2bzr_A 493 QEYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRL 530 (548)
T ss_dssp HHHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHH
T ss_pred HHHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHH
Confidence 1 11123557799999999999988776554444433
No 420
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.71 E-value=0.021 Score=58.03 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=52.2
Q ss_pred ceEEEEcCCc-CcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCccccCC
Q 004726 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (733)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (733)
+++.|||.|. .|.++|..|++.|.+|++..+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 4799999865 799999999999999999986432221 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004726 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (733)
Q Consensus 388 aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (733)
||+||.+++-..-++. ..++++++|++..+
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVKG-------EWIKEGAIVIDVGI 234 (286)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCS
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCeEEEEecc
Confidence 9999999973222222 34688888776443
No 421
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.63 E-value=0.024 Score=57.50 Aligned_cols=71 Identities=23% Similarity=0.231 Sum_probs=52.3
Q ss_pred ceEEEEcCCcC-cHHHHHHHHHC--CCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcccc
Q 004726 309 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (733)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (733)
+++.|||.|.| |..+|..|.+. |.+|++.+++.+.+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 58999999976 99999999999 899999986543222 346
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (733)
++||+||.+++-.--++. ..+++++++++..
T Consensus 202 ~~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVg 232 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTA-------DMVRPGAAVIDVG 232 (281)
T ss_dssp TTCSEEEECSCCTTCBCG-------GGSCTTCEEEECC
T ss_pred hhCCEEEECCCCCcccCH-------HHcCCCcEEEEcc
Confidence 789999999973221222 2357888877543
No 422
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.59 E-value=0.031 Score=59.26 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=47.8
Q ss_pred ceEEEEcCCcCcHH-HHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 309 RKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 309 ~kI~VIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
-||+|||+|.||.. .+..+.+. +++|+ ++|++++++++ + .......+++ +.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~~l 62 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------D------------WPAIPVVSDPQML 62 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------T------------CSSCCEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------h------------CCCCceECCHHHH
Confidence 48999999999997 67777665 67775 88999876431 0 1123345555 33
Q ss_pred cC--CCCEEEEeccCChHH
Q 004726 385 FK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 385 l~--~aDlVI~avpe~~~~ 401 (733)
+. +.|+|++|+|.....
T Consensus 63 l~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 63 FNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHCSSCCEEEECSCTTTHH
T ss_pred hcCCCCCEEEEeCChHHHH
Confidence 43 599999999976654
No 423
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.59 E-value=0.034 Score=56.03 Aligned_cols=42 Identities=31% Similarity=0.453 Sum_probs=35.9
Q ss_pred eEEEE-c-CCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
|+++| | .+-||.++|..|++.|.+|+++|++++.+++..+.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 66666 4 478999999999999999999999999988776554
No 424
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.53 E-value=0.18 Score=51.67 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=61.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccc-cCccc--c
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSE--F 385 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~--l 385 (733)
.+|..||+|..|.+........|.+|+.+|++++.++.+.+.+++. |. .++.+. .|... -
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~d 186 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVIDG 186 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGGG
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCCC
Confidence 5899999999765433322235889999999999999987654321 11 122221 11111 2
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004726 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (733)
Q Consensus 386 ~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (733)
...|+|+.+.. ..-+..+++++.+.++|+..++..
T Consensus 187 ~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 LEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 46799997654 344668899999999987766543
No 425
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.49 E-value=0.063 Score=53.04 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=36.9
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 46 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL 46 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356777776 78999999999999999999999999887765443
No 426
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.45 E-value=0.053 Score=57.90 Aligned_cols=67 Identities=15% Similarity=0.075 Sum_probs=47.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC--CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 309 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.++..+. . .+...+++ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~----------------------~-gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA----------------------F-GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH----------------------T-TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH----------------------h-CCCEECCHHHH
Confidence 489999999 798878777664 57766 779999887664221 1 23445566 55
Q ss_pred cCCCCEEEEeccCCh
Q 004726 385 FKDVDMVIEAVIESV 399 (733)
Q Consensus 385 l~~aDlVI~avpe~~ 399 (733)
+++.|+|+.++|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 788999999998654
No 427
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=94.43 E-value=0.28 Score=54.39 Aligned_cols=159 Identities=15% Similarity=0.130 Sum_probs=98.0
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004726 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (733)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (733)
|.=|+|.. -.++++-.+...+.++.+++. ++-+|.|.-.+ .|-.|.+-++ ....+...+++ .++.
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~E~----------~Gi~~~gAk~l-~a~a 408 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQEY----------GGVIKHGAKLL-YAYG 408 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHHHH----------hhHHHHHHHHH-HHHH
Confidence 33456643 689999999999998877654 56677775332 3444443221 11233344566 5788
Q ss_pred cCCCcEEEEeCCcccchhhHHhh----hcCEEEEeCCceEeCccccCCCCCChhhhhhhcc-ccC---HHHHHHHHHcCC
Q 004726 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPR-LVG---LSKAIEMMLLSK 167 (733)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~lal----acD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r-~~G---~~~a~~l~ltG~ 167 (733)
.+..|+|+.|-|.+.|||..-.. .+|+++|.++++++ .++.-|.+..+-+ .+- ....+.--+.-+
T Consensus 409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~-------Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~~~ 481 (531)
T 3n6r_B 409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVA-------VMGAKGATEIIHRGDLGDPEKIAQHTADYEER 481 (531)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHH
T ss_pred hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEe-------cCCHHHHHHHHhcccccchhHHHHHHHHHHHH
Confidence 99999999999999988874433 28999888887776 3333343333322 121 111111111112
Q ss_pred CCCHHHHHHcCCccEEcCcchHHHHHHHH
Q 004726 168 SITSEEGWKLGLIDAVVTSEELLKVSRLW 196 (733)
Q Consensus 168 ~i~a~eA~~~Glv~~vv~~~~l~~~a~~~ 196 (733)
.-++-.|.+.|+||.|+++.+........
T Consensus 482 ~~~p~~aa~~~~vD~vIdP~~TR~~l~~~ 510 (531)
T 3n6r_B 482 FANPFVASERGFVDEVIQPRSTRKRVARA 510 (531)
T ss_dssp HSSSHHHHHHTSSSEECCGGGHHHHHHHH
T ss_pred hcCHHHHHhcCccCcccCHHHHHHHHHHH
Confidence 24566788999999999998876544433
No 428
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.42 E-value=0.066 Score=55.70 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=28.5
Q ss_pred ceEEEEcCCcCcHHHHHHHHH--CCCee-EEEeCChHH
Q 004726 309 RKVAVIGGGLMGSGIATAHIL--NNIYV-VLKEVNSEY 343 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~--~G~~V-~~~d~~~e~ 343 (733)
.||+|||+|.||..++..+.+ .+.++ .++|+++++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 489999999999999999865 35554 577999776
No 429
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=94.40 E-value=0.35 Score=53.63 Aligned_cols=163 Identities=15% Similarity=0.205 Sum_probs=101.7
Q ss_pred EEEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCcccCCCCchhhhhccCCCcccccchhHHHHHHHHH
Q 004726 17 IITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (733)
Q Consensus 17 ~i~l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (733)
-|.=|+|.. -.++++-.+...+.++.+++. ++-+|.|.-.+ .|-.|.+-++ ....+...+++ .++
T Consensus 335 gvian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E~----------~gi~~~~Ak~l-~a~ 401 (530)
T 3iav_A 335 GIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQEH----------DGIIRRGAKLI-FAY 401 (530)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH----------TTHHHHHHHHH-HHH
T ss_pred EEEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHHHH----------hhHHHHHHHHH-HHH
Confidence 344456643 689999999999999877754 46677775333 2666654321 12333444566 578
Q ss_pred hcCCCcEEEEeCCcccchhhHHhhh-----cCEEEEeCCceEeCccccCCCCCChhhhhhhcc-ccCH------HHHHHH
Q 004726 95 EDCKKPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPR-LVGL------SKAIEM 162 (733)
Q Consensus 95 ~~~~kp~Iaav~G~a~GgG~~lala-----cD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r-~~G~------~~a~~l 162 (733)
.....|+|+.|-|.+.|||. ++++ +|+++|.++++++. ++.-|.+..+-+ .+-. ..-.++
T Consensus 402 a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~V-------m~~egaa~il~r~~~~~~~~d~~~~~~~~ 473 (530)
T 3iav_A 402 AEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTIADAGDDAEATRARL 473 (530)
T ss_dssp HHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSTTTSTTCTTCHHHHHHH
T ss_pred HhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEec-------CCHHHHHHHHhhhhhhhcccCHHHHHHHH
Confidence 89999999999999998766 4444 79998888887763 333343333322 1110 111111
Q ss_pred H--HcCCCCCHHHHHHcCCccEEcCcchHHHHHHHHHHHH
Q 004726 163 M--LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI 200 (733)
Q Consensus 163 ~--ltG~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~ 200 (733)
. +.-+.-++-.|.+.|+||.|+++.+.........+.+
T Consensus 474 ~~~y~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~ 513 (530)
T 3iav_A 474 IQEYEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQL 513 (530)
T ss_dssp HHHHHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHH
Confidence 1 1112246778889999999999988766544444333
No 430
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.38 E-value=0.042 Score=56.63 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.5
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 457999997 9999999999999999999999986
No 431
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.31 E-value=0.075 Score=53.58 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=35.2
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARS 50 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 45667776 8999999999999999999999999877665443
No 432
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.31 E-value=0.074 Score=53.33 Aligned_cols=43 Identities=26% Similarity=0.196 Sum_probs=35.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35666666 88999999999999999999999999887765544
No 433
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.29 E-value=0.055 Score=56.20 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.5
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 467999996 9999999999999999999999986
No 434
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.25 E-value=0.042 Score=54.99 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=34.3
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA 52 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 46777776 99999999999999999999999988766543
No 435
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.24 E-value=0.054 Score=47.96 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=58.2
Q ss_pred cceEEEEcC----CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCcc
Q 004726 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (733)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (733)
.++|+|||+ +..|..+...|.+.|++|+-++...+.+ .......+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 368999998 5679999999999999999988764321 1234455566
Q ss_pred ccCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEE
Q 004726 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (733)
++.+.|+++.++| .+....+++++.+.=. ..++.
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~g~-k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSLKP-KRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHHCC-SEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhcCC-CEEEE
Confidence 6655999999999 7777777777665432 34443
No 436
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.23 E-value=0.071 Score=53.70 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=34.7
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS 49 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45777776 899999999999999999999999987766543
No 437
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.22 E-value=0.13 Score=49.99 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=32.1
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~ 344 (733)
||.|.|+ |.+|..++..|++.|++|++.+|+++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 7999984 9999999999999999999999998754
No 438
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.22 E-value=0.14 Score=56.32 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChH
Q 004726 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (733)
-+||.|||+|..|.+.|..|++.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 46899999999999999999999999999999653
No 439
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=94.08 E-value=0.13 Score=58.72 Aligned_cols=81 Identities=11% Similarity=0.081 Sum_probs=55.6
Q ss_pred CCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeCccccCCCCCChhhhhhhccccCHHHHHHHHHcCCCC--CHHH-
Q 004726 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TSEE- 173 (733)
Q Consensus 97 ~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~P~~g~~~~l~r~~G~~~a~~l~ltG~~i--~a~e- 173 (733)
...|+|++|.|.|.|||..+...||++|+.+++.+.+ -|+...+. .+|+.+ +.++
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~ifl--------------------tGP~vIk~--~tGeeV~~s~eeL 302 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIIL--------------------TGAPAINK--MLGREVYTSNLQL 302 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEES--------------------SCHHHHHH--HHTSCCCSCTHHH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEE--------------------eCHHHHHH--HhCCccccCchhc
Confidence 4689999999999999999999999999998864332 12222211 256665 4443
Q ss_pred -----HHHcCCccEEcCcchHHHHHHHHHHHHHc
Q 004726 174 -----GWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (733)
Q Consensus 174 -----A~~~Glv~~vv~~~~l~~~a~~~a~~~a~ 202 (733)
-...|++|.+++.++ .+.+.++++..
T Consensus 303 GGA~vh~~sGvad~va~dd~---eal~~ir~lLs 333 (758)
T 3k8x_A 303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWMS 333 (758)
T ss_dssp HSHHHHTTTTSSSEEESSHH---HHHHHHHHHHT
T ss_pred chhhHHHhcCCeeEEecCHH---HHHHHHHHHHh
Confidence 236899999997553 44455555544
No 440
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.06 E-value=0.056 Score=55.54 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.1
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (733)
+||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 37999988 99999999999999999999999764
No 441
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.06 E-value=0.017 Score=61.21 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=45.5
Q ss_pred ceEEEEcCCcCcHHHHHH-H-HH-CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~-l-~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (733)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+... ....+...+++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~-----------------------~~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAP-----------------------IYSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSG-----------------------GGTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHH-----------------------hcCCCceECCHHH
Confidence 489999999999974433 3 32 367877 8899987642210 01223445666 4
Q ss_pred ccC--CCCEEEEeccCChHH
Q 004726 384 EFK--DVDMVIEAVIESVPL 401 (733)
Q Consensus 384 ~l~--~aDlVI~avpe~~~~ 401 (733)
.++ ++|+|++|+|.....
T Consensus 60 ll~~~~~D~V~i~tp~~~h~ 79 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSHF 79 (345)
T ss_dssp HHTCTTEEEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEcCChHHHH
Confidence 444 489999999965543
No 442
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.99 E-value=0.064 Score=54.89 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=34.5
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI 77 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4555565 88999999999999999999999998877765443
No 443
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.97 E-value=0.048 Score=54.99 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.|++++.++...+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667776 899999999999999999999999988776543
No 444
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.94 E-value=0.083 Score=53.52 Aligned_cols=42 Identities=29% Similarity=0.259 Sum_probs=34.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 64 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK 64 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45667766 8999999999999999999999999877665443
No 445
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.94 E-value=0.26 Score=51.26 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|+.++..|++.|++|++.+++.+..+..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 57999988 9999999999999999999999998776543
No 446
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.93 E-value=0.074 Score=55.82 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=60.2
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHC-CCeeEEEeCCh---HHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc--
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-- 380 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~-G~~V~~~d~~~---e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-- 380 (733)
|.||+|+|+ |.+|..+...|.+. .++++.+..+. ..-+.. . .....+ .+.. .+.+..
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~-~---~~~p~~--~~~~----------~~~v~~~~ 67 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI-S---DLHPQL--KGIV----------ELPLQPMS 67 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH-H---HHCGGG--TTTC----------CCBEEEES
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch-H---HhCccc--cCcc----------ceeEeccC
Confidence 478999995 99999999999884 56887765443 211111 0 000000 0100 122222
Q ss_pred Ccccc-CCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCH
Q 004726 381 DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (733)
Q Consensus 381 ~~~~l-~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (733)
+.+.+ +++|+||+|+| ...-+++..++ +..++.++++++...+
T Consensus 68 ~~~~~~~~~Dvvf~a~p--~~~s~~~~~~~---~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATA--HEVSHDLAPQF---LEAGCVVFDLSGAFRV 111 (337)
T ss_dssp SGGGTCTTCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECSSTTSS
T ss_pred CHHHHhcCCCEEEECCC--hHHHHHHHHHH---HHCCCEEEEcCCcccc
Confidence 34445 89999999999 55545555544 3467888888887644
No 447
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.92 E-value=0.16 Score=52.01 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCC-eeEEEeCCh
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (733)
.+|.|||+|..|+.+|..|+++|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 489999999999999999999997 899999876
No 448
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.88 E-value=0.043 Score=57.00 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (733)
++|.|+|+ |.+|+.++..|++.|++|++.+|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57999996 99999999999999999999999875
No 449
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.88 E-value=0.045 Score=57.64 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.6
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (733)
.++|.|.|+ |.+|+.++..|++.|++|++++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 368999996 99999999999999999999999654
No 450
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=93.86 E-value=0.04 Score=54.48 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=33.2
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++..
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL 45 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 35667765 8999999999999999999999998876654
No 451
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.85 E-value=0.057 Score=53.93 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=33.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 45 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777776 8999999999999999999999998876654
No 452
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.85 E-value=0.04 Score=56.14 Aligned_cols=42 Identities=10% Similarity=0.241 Sum_probs=34.4
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 70 (271)
T 4ibo_A 28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF 70 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3444455 89999999999999999999999999887765543
No 453
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=93.85 E-value=0.026 Score=56.60 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=33.1
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|.++|..|++.|++|++.|++++.++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 42 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF 42 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 35666666 8899999999999999999999999876654
No 454
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.84 E-value=0.14 Score=53.75 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=28.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLL 345 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~ 345 (733)
.||+|+|+|.||..+++.|.++ +++|+ +.|++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~ 40 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA 40 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHH
Confidence 4899999999999999999874 56765 4577655443
No 455
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.84 E-value=0.067 Score=54.44 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=34.0
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~ 63 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG 63 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 45556665 899999999999999999999999987766543
No 456
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.83 E-value=0.091 Score=54.83 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=36.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46777776 89999999999999999999999999888765543
No 457
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=93.83 E-value=0.057 Score=54.18 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=35.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+++.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 34566666 89999999999999999999999999887765544
No 458
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.81 E-value=0.055 Score=54.86 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=34.9
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 48 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI 48 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4555565 88999999999999999999999999887765443
No 459
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.77 E-value=0.046 Score=55.29 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=35.4
Q ss_pred ceEEEEcC-C-cCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-G-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G-~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ | -+|..+|..|++.|++|++.+++.+.++...+
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH
Confidence 46777798 7 59999999999999999999999988776544
No 460
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.77 E-value=0.065 Score=55.18 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.4
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 468999997 9999999999999999999999984
No 461
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.74 E-value=0.1 Score=54.96 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=31.3
Q ss_pred CcceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 307 GVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 307 ~~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
..++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3468999998 9999999999999999999999976
No 462
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.73 E-value=0.033 Score=55.13 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
.|+|||+|.-|.+.|..|+++|++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999864
No 463
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.70 E-value=0.073 Score=53.38 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVE 55 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46778876 999999999999999999999999887665433
No 464
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.69 E-value=0.095 Score=52.97 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=35.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 52 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESAL 52 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35666665 88999999999999999999999999887765544
No 465
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=93.69 E-value=0.052 Score=54.79 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=33.5
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777776 8999999999999999999999998876654
No 466
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=93.69 E-value=0.074 Score=53.81 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=34.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 56 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA 56 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45667765 8999999999999999999999999887665443
No 467
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=93.69 E-value=0.071 Score=53.30 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=34.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
+++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGD 49 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 45667766 899999999999999999999999988766543
No 468
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.68 E-value=0.085 Score=52.77 Aligned_cols=43 Identities=28% Similarity=0.274 Sum_probs=36.4
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI 53 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46677776 89999999999999999999999999887765443
No 469
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.68 E-value=0.061 Score=54.34 Aligned_cols=41 Identities=24% Similarity=0.280 Sum_probs=33.9
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
+|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 53 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD 53 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4545555 8999999999999999999999999887765443
No 470
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.67 E-value=0.043 Score=55.47 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=31.3
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~ 345 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.+.
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 45666665 88999999999999999999999987653
No 471
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.66 E-value=0.069 Score=54.38 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=34.7
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 74 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA 74 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence 46777766 899999999999999999999999987765443
No 472
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.66 E-value=0.098 Score=51.93 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=34.3
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++...+
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE 49 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 45666666 899999999999999999999999887765543
No 473
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=93.65 E-value=0.082 Score=52.91 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=33.2
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
+|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD 42 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4555565 899999999999999999999999987765433
No 474
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.62 E-value=0.085 Score=53.52 Aligned_cols=40 Identities=20% Similarity=0.101 Sum_probs=34.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 72 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA 72 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH
Confidence 56778876 89999999999999999999999988766543
No 475
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.62 E-value=0.071 Score=59.68 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.5
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~ 343 (733)
++||.|.|+ |.+|+.++..|++.|++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 458999995 999999999999999999999998764
No 476
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.60 E-value=0.085 Score=53.31 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=35.2
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 54 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQ 54 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH
Confidence 35666666 7899999999999999999999999887776543
No 477
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.50 E-value=0.084 Score=53.02 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=34.2
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS 44 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35667765 899999999999999999999999987765543
No 478
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=93.50 E-value=0.085 Score=53.76 Aligned_cols=42 Identities=21% Similarity=0.133 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 65 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45666665 8999999999999999999999999877665443
No 479
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=93.47 E-value=0.058 Score=55.10 Aligned_cols=42 Identities=24% Similarity=0.391 Sum_probs=35.4
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 54 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQE 54 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45666665 8999999999999999999999999887776543
No 480
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=93.46 E-value=0.055 Score=54.97 Aligned_cols=39 Identities=26% Similarity=0.274 Sum_probs=33.3
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 49 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL 49 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45677766 8999999999999999999999998876553
No 481
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=93.44 E-value=0.054 Score=56.60 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=30.5
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeE-EEeCChHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVV-LKEVNSEY 343 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~-~~d~~~e~ 343 (733)
|.||+|||+ |.||...+..+.+.+.+++ ++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 468999999 7899999999999888654 77888764
No 482
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.43 E-value=0.13 Score=52.96 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=36.1
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l 70 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI 70 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46777776 89999999999999999999999998877654433
No 483
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.41 E-value=0.067 Score=55.69 Aligned_cols=36 Identities=14% Similarity=0.063 Sum_probs=30.6
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeE-EEeCChHH
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVV-LKEVNSEY 343 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~-~~d~~~e~ 343 (733)
|.||+|||+ |.||...+..+...+.+|+ ++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 468999999 7899999999999888754 78998875
No 484
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.39 E-value=0.14 Score=53.91 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.7
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCCCeeEEEeCChHH
Q 004726 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~ 343 (733)
++|+|+|.|.+|...|+.+...|.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 58999999999999999999999999999999764
No 485
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.38 E-value=0.081 Score=56.61 Aligned_cols=70 Identities=23% Similarity=0.237 Sum_probs=45.3
Q ss_pred eEEEEcCCcCcHHHHHHHHH--------CCCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccccc
Q 004726 310 KVAVIGGGLMGSGIATAHIL--------NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (733)
Q Consensus 310 kI~VIG~G~mG~~iA~~l~~--------~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (733)
||||||+|.||..-+..+.. .+.+|+ ++|++++++++..+. .+.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------------------FGFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCeecC
Confidence 79999999999876665533 245654 789999887765332 12223455
Q ss_pred Ccc-cc--CCCCEEEEeccCChHH
Q 004726 381 DYS-EF--KDVDMVIEAVIESVPL 401 (733)
Q Consensus 381 ~~~-~l--~~aDlVI~avpe~~~~ 401 (733)
|++ .+ .+.|+|+.|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 663 34 4689999999966554
No 486
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=93.35 E-value=0.11 Score=52.77 Aligned_cols=43 Identities=16% Similarity=0.246 Sum_probs=35.3
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
++|.|.|+ |-+|.++|..|++.|++|++.+++.+.++...+.+
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 71 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL 71 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34556666 78999999999999999999999998877665443
No 487
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.33 E-value=0.1 Score=52.96 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=34.4
Q ss_pred eEEEE-cC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VI-G~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
|+++| |+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 72 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF 72 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45555 55 88999999999999999999999998877665443
No 488
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.33 E-value=0.081 Score=54.11 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=55.5
Q ss_pred ceEEEEc-CCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhccccccCc-cc
Q 004726 309 RKVAVIG-GGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (733)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (733)
.||+|+| +|.||..++..+.+. +++++ ++|++..... +.+ ...+...+ ...+..++++ +.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~-G~d-----~gel~G~~----------~~gv~v~~dl~~l 85 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFV-DKD-----ASILIGSD----------FLGVRITDDPESA 85 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTT-TSB-----GGGGTTCS----------CCSCBCBSCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc-ccc-----hHHhhccC----------cCCceeeCCHHHH
Confidence 4899999 899999999998754 67766 5587643210 000 00000000 0124455666 45
Q ss_pred cCCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004726 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (733)
Q Consensus 385 l~~aDlVI~avpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (733)
+.++|+||++.+ ++.....+.. .+..+.-+++.|++++
T Consensus 86 l~~aDVvIDFT~--p~a~~~~~~~---~l~~Gv~vViGTTG~~ 123 (288)
T 3ijp_A 86 FSNTEGILDFSQ--PQASVLYANY---AAQKSLIHIIGTTGFS 123 (288)
T ss_dssp TTSCSEEEECSC--HHHHHHHHHH---HHHHTCEEEECCCCCC
T ss_pred hcCCCEEEEcCC--HHHHHHHHHH---HHHcCCCEEEECCCCC
Confidence 789999999886 5543333333 3334444545555544
No 489
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.32 E-value=0.27 Score=49.15 Aligned_cols=38 Identities=13% Similarity=0.236 Sum_probs=31.5
Q ss_pred ceEEEE-c-CCcCcHHHHHHHHHCCCeeEEEeCChHHHHH
Q 004726 309 RKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (733)
Q Consensus 309 ~kI~VI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (733)
.|+.|| | ++-+|.++|..|++.|.+|++.|++++.++.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 41 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD 41 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 354555 5 4789999999999999999999999887654
No 490
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.30 E-value=0.13 Score=51.65 Aligned_cols=41 Identities=22% Similarity=0.135 Sum_probs=34.8
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLT 51 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46777776 899999999999999999999999987766543
No 491
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.29 E-value=0.062 Score=54.83 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=34.9
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (733)
++|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 75 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADE 75 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 35666665 8899999999999999999999999887765443
No 492
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.26 E-value=0.093 Score=54.13 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.2
Q ss_pred cceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCCh
Q 004726 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (733)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (733)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 467999996 9999999999999999999999983
No 493
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.25 E-value=0.057 Score=56.61 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=43.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHCC---------Cee-EEEeCChHHHHHHHHHHHHHHHHhHhcCCCCHHHHHHHhhcccc
Q 004726 309 RKVAVIGGGLMGSGIATAHILNN---------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~G---------~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (733)
-||+|||+|.||+.++..+.+.. .+| .++|++.++.+ + +. ....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~----------------~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR----------------A-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC----------------S-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh----------------c-cC---------cccc
Confidence 47999999999999999998763 455 46687754311 1 11 1123
Q ss_pred ccCc-cccCCCCEEEEeccCC
Q 004726 379 VLDY-SEFKDVDMVIEAVIES 398 (733)
Q Consensus 379 ~~~~-~~l~~aDlVI~avpe~ 398 (733)
++|+ +.+ +.|+|++|+|..
T Consensus 58 ~~d~~~ll-~iDvVve~t~~~ 77 (332)
T 2ejw_A 58 RAEPFDLL-EADLVVEAMGGV 77 (332)
T ss_dssp ESSCCCCT-TCSEEEECCCCS
T ss_pred cCCHHHHh-CCCEEEECCCCc
Confidence 5566 445 999999999855
No 494
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.25 E-value=0.074 Score=54.86 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=33.3
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
+|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~ 68 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQ 68 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4555555 899999999999999999999999988766543
No 495
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=93.23 E-value=0.094 Score=52.21 Aligned_cols=41 Identities=20% Similarity=0.043 Sum_probs=34.5
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFEN 47 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35666666 899999999999999999999999988776544
No 496
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=93.20 E-value=0.094 Score=53.93 Aligned_cols=41 Identities=24% Similarity=0.345 Sum_probs=34.5
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~ 76 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMA 76 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667775 899999999999999999999999887766543
No 497
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.20 E-value=0.14 Score=53.81 Aligned_cols=85 Identities=15% Similarity=0.237 Sum_probs=49.4
Q ss_pred ceEEEEcCCcCcHHHHHHHHHC-CCeeE-EEeCChHHHHHHHHHHHHHHHHhHhcCCCCHH--HHHHHhhccccccCc-c
Q 004726 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD--KANNALKMLKGVLDY-S 383 (733)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~--~~~~~~~~i~~~~~~-~ 383 (733)
-||||+|+|.||..++..+.+. +.+|+ +.|++++.+....+.. ..--.+.+... .... ..+....++ +
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~-----g~~~~~~~~~~v~~~~~--~~~~v~~d~~~ 75 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASEEFIPRFEK--EGFEVAGTLND 75 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHH--HTCCCSCBHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhc-----CccccccccccceeccC--CceEEcCcHHH
Confidence 4899999999999999999876 45654 5688776655432210 00000000000 0000 122333444 3
Q ss_pred ccCCCCEEEEeccCChH
Q 004726 384 EFKDVDMVIEAVIESVP 400 (733)
Q Consensus 384 ~l~~aDlVI~avpe~~~ 400 (733)
.+.++|+|++|.|....
T Consensus 76 l~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 76 LLEKVDIIVDATPGGIG 92 (334)
T ss_dssp HHTTCSEEEECCSTTHH
T ss_pred hccCCCEEEECCCcccc
Confidence 45789999999996654
No 498
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.18 E-value=0.088 Score=52.63 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=34.6
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 48 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA 48 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667776 889999999999999999999999988776543
No 499
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.18 E-value=0.075 Score=54.16 Aligned_cols=41 Identities=22% Similarity=0.186 Sum_probs=34.5
Q ss_pred ceEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHH
Q 004726 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (733)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (733)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~ 71 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT 71 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45677776 899999999999999999999999987765433
No 500
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.13 E-value=0.084 Score=53.44 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=35.0
Q ss_pred eEEEEcC-CcCcHHHHHHHHHCCCeeEEEeCChHHHHHHHHHH
Q 004726 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (733)
Q Consensus 310 kI~VIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (733)
+|.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 64 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL 64 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4555565 89999999999999999999999999887765544
Done!