Citrus Sinensis ID: 004728

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730---

MANHNDPLLQVETTCGSLLYELQIIWDEVGETDTDRDKMLLELEQECLEVYRRKVDQANRCRAQLRQAIADSEADLAAICSAMGERPVHIRQSDQTAESLKEELRRILPQVEEMRKRKSDRKKQFVDVLEQIEMIKSEILGSTVYISSKTVVDDADLSLRKLEEFHRELHELQKEKSNRLKQVQDHLNTLSSLCSVLGIDFKHTVSDIHPSFCENEGSMSISNDAIERLTIAIHKLREVKIQRMQKLQDLATTMLELWNLMDTPVEEQQAFQSVTCNIAASEHEITEPNTLSVDFISYVETEVSRLEELKTSKMKELVLKKRLELEEICRNTHMVPENDHSIEYAIEAIESGAMDTANVLEQIELQIAKVKEEAFSRKEILERVEKWLGACEEECWLEEYNRDDNRYNAGKGAHLTLKRAEKARSLVNKLPGMVEALASKTIAWEKERGVEFLYDGVRLLSMLEEYTILRQEKEQERRRQRDQKKLQGQLIAEQEALYGSKPSPSKTQSVKKAPRVSTGSVSHRRLSVGGAMLQTPKPELPSSTKATPHPRTVKKIDRILQNDHTNVRMDDGFAALSAGRRGLDIAGFPIKKHSLGACEPQSPMIRKPFSPISSTASSKSNIINLLEDLNSHGETTMQKAVPPIESFTTPSKTNTLVDEENRTPKAMPIPVPSTPSTVSVPMQTAITPAHASAPIPYGTTQVEETAEEIEYSFEERRAGFVLPKTHVKPLIQV

ccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHcccccccccccccc

***********ETTCGSLLYELQIIWDEVGETDTDRDKMLLELEQECLEVYRRKVDQANRCRAQLRQAIADSEADLAAICSAM*****************KEELRRILP***E***R*SDRKKQFVDVLEQIEMIKSEILGS*****SKTVVDDADLSLRKLEEFHRELHE*********KQVQDHLNTLSSLCSVLGIDFKHTVSDIHPSFCENEGSMSISNDAIERLTIAIHKLREVKIQRMQKLQDLATTMLELWNLMDTPVEEQQAFQSVTCNIAASEHEITEPNTLSVDFISYVETEVSRLEELKTSKMKELVLKKRLELEEICRNTHMVPENDHSIEYAIEAIESGAMDTANVLEQIELQIAKVKEEAFSRKEILERVEKWLGACEEECWLEEYNRDDNRYNAGKGAHLTLKRAEKARSLVNKLPGMVEALASKTIAWEKERGVEFLYDGVRLLSMLEEYTIL*************************************************************************************************************************************************************************************************************************************************YSFEERRAGFVLPKTHVKPLIQV

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MANHNDPLLQVETTCGSLLYELQIIWDEVGETDTDRDKMLLELEQECxxxxxxxxxxxxxxxxxxxxxxxxxxxxLAAICSAMGERPVHIRQSDQTAESLKEELRRILPQVEEMRKRKSDRKKQFVDVLEQIEMIKSEILGSTVYISSKTVVDDxxxxxxxxxxxxxxxxxxxxxxxxxxxxVQDHLNTLSSLCSVLGIDFKHTVSDIHPSFCENEGSMSISNDAIERLTIAIHKLREVKIQRMQKLQDLATTMLELWNLMDTPVEEQQAFQSVTCNIAASEHEITEPNTLSVDFISYVETEVSRLEELKTSKMKELVLKKRLELEEICRNTHMVPENDHSIEYAIEAIESGxxxxxxxxxxxxxxxxxxxxxAFSRKEILERVEKWLGACEEECWLEEYNRDDNRYNAGKGAHLTLKRAEKARSLVNKLPGMVEALASKTIAWEKERGVEFLYDGVRxxxxxxxxxxxxxxxxxxxxxxxxxKKLQGQLIAEQEALYGSKPSPSKTQSVKKAPRVSTGSVSHRRLSVGGAMLQTPKPELPSSTKATPHPRTVKKIDRILQNDHTNVRMDDGFAALSAGRRGLDIAGFPIKKHSLGACEPQSPMIRKPFSPISSTASSKSNIINLLEDLNSHGETTMQKAVPPIESFTTPSKTNTLVDEENRTPKAMPIPVPSTPSTVSVPMQTAITPAHASAPIPYGTTQVEETAEEIEYSFEERRAGFVLPKTHVKPLIQV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
65-kDa microtubule-associated protein 3	Microtubule-associated protein that plays a critical role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Essential for the cytokinesis, especially in roots, by maintaining the integrity of the overlapped microtubules in the phragmoplast. Required during root morphogenesis. Needed for giant cell development during root knot nematode infection, where cytokinesis is initiated but not completed.	probable	Q9FHM4

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NRX, chain A
Confidence level:very confident
Coverage over the Query: 368-500
View the alignment between query and template
View the model in PyMOL

Template: 1I84, chain S
Confidence level:confident
Coverage over the Query: 69-85,100-121
View the alignment between query and template
View the model in PyMOL