Query 004730
Match_columns 733
No_of_seqs 164 out of 323
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 03:57:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v77_A PH1877P, hypothetical p 100.0 1.4E-29 5E-34 247.5 19.7 200 1-252 7-209 (212)
2 1m65_A Hypothetical protein YC 98.2 6.5E-05 2.2E-09 72.5 17.2 214 1-251 1-229 (245)
3 2wje_A CPS4B, tyrosine-protein 97.5 0.00058 2E-08 67.2 11.0 223 1-252 3-244 (247)
4 3qy7_A Tyrosine-protein phosph 97.4 0.0016 5.3E-08 66.0 13.6 222 3-253 1-235 (262)
5 2w9m_A Polymerase X; SAXS, DNA 97.1 0.011 3.7E-07 66.0 17.0 203 2-241 327-546 (578)
6 3b0x_A DNA polymerase beta fam 97.0 0.0098 3.3E-07 66.2 15.8 205 2-242 337-560 (575)
7 2yxo_A Histidinol phosphatase; 96.5 0.047 1.6E-06 53.1 14.5 95 135-234 141-248 (267)
8 2yb1_A Amidohydrolase; HET: AM 94.4 0.34 1.2E-05 49.2 12.3 79 129-216 172-253 (292)
9 2anu_A Hypothetical protein TM 93.2 0.26 9E-06 48.5 8.7 128 91-243 101-233 (255)
10 2y1h_A Putative deoxyribonucle 89.9 6.1 0.00021 38.4 14.2 113 124-251 142-264 (272)
11 3dcp_A Histidinol-phosphatase; 78.2 1.4 4.7E-05 45.0 3.7 58 160-221 208-268 (283)
12 2vc7_A Aryldialkylphosphatase; 77.3 8.7 0.0003 37.9 9.0 89 159-250 205-313 (314)
13 1xwy_A DNAse TATD, deoxyribonu 76.2 21 0.00073 34.3 11.3 86 159-250 161-260 (264)
14 3k2g_A Resiniferatoxin-binding 75.0 10 0.00035 40.0 9.3 91 159-252 245-354 (364)
15 3rhg_A Putative phophotriester 73.8 12 0.00042 39.5 9.6 91 159-252 236-344 (365)
16 1j6o_A TATD-related deoxyribon 73.8 68 0.0023 31.3 14.3 115 124-251 136-264 (268)
17 2i5g_A Amidohydrolase; NYSGXRC 71.1 66 0.0023 33.7 14.2 130 125-254 156-323 (325)
18 2ob3_A Parathion hydrolase; me 70.9 17 0.0006 37.2 9.7 89 159-250 202-324 (330)
19 1zzm_A Putative deoxyribonucle 70.4 23 0.00078 34.0 9.9 114 124-250 130-256 (259)
20 3tn4_A Phosphotriesterase; lac 67.8 15 0.00051 39.0 8.6 89 159-250 246-358 (360)
21 1bf6_A Phosphotriesterase homo 66.9 26 0.00088 33.8 9.4 89 159-250 191-290 (291)
22 1yix_A Deoxyribonuclease YCFH; 64.3 37 0.0013 32.4 9.9 87 158-251 159-255 (265)
23 2gzx_A Putative TATD related D 58.1 1.3E+02 0.0044 28.5 14.5 109 131-252 134-255 (265)
24 3ovg_A Amidohydrolase; structu 57.5 29 0.001 36.8 8.6 89 160-251 223-329 (363)
25 2xio_A Putative deoxyribonucle 57.2 80 0.0027 31.6 11.3 84 159-251 176-291 (301)
26 1itu_A Renal dipeptidase; glyc 50.8 1.3E+02 0.0045 32.2 12.3 133 123-255 193-339 (369)
27 3ly0_A Dipeptidase AC. metallo 50.4 1.4E+02 0.0046 32.2 12.3 134 123-256 207-357 (364)
28 3gtx_A Organophosphorus hydrol 48.0 38 0.0013 35.3 7.5 89 159-250 226-338 (339)
29 3gnh_A L-lysine, L-arginine ca 48.0 1.4E+02 0.0048 29.8 11.4 118 124-251 223-357 (403)
30 3pnz_A Phosphotriesterase fami 47.6 40 0.0014 35.2 7.5 89 159-250 221-326 (330)
31 3rcm_A TATD family hydrolase; 47.3 87 0.003 31.9 9.8 87 159-251 163-263 (287)
32 2vun_A Enamidase; nicotinate d 44.2 1.5E+02 0.0052 29.5 10.9 117 124-250 190-318 (386)
33 3gg7_A Uncharacterized metallo 39.1 1.6E+02 0.0056 29.4 10.3 84 159-252 153-244 (254)
34 3cjp_A Predicted amidohydrolas 38.4 1E+02 0.0036 29.6 8.5 113 119-250 140-262 (272)
35 4exb_A Putative uncharacterize 30.1 69 0.0023 32.4 5.9 101 120-225 183-285 (292)
36 2rag_A Dipeptidase; aminohydro 26.4 4.1E+02 0.014 28.8 11.4 131 123-254 224-409 (417)
37 3feq_A Putative amidohydrolase 26.1 92 0.0032 31.3 5.9 117 124-251 228-361 (423)
38 3nqb_A Adenine deaminase 2; PS 24.8 1.5E+02 0.005 33.2 7.8 83 160-250 247-334 (608)
39 2dvt_A Thermophilic reversible 24.3 1.3E+02 0.0045 29.4 6.5 73 164-250 250-322 (327)
40 3b40_A PVDM, probable dipeptid 23.8 7.2E+02 0.025 26.9 13.2 133 123-255 208-409 (417)
41 2hnh_A DNA polymerase III alph 21.7 47 0.0016 39.6 3.2 33 3-42 6-41 (910)
No 1
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=99.97 E-value=1.4e-29 Score=247.49 Aligned_cols=200 Identities=16% Similarity=0.173 Sum_probs=171.4
Q ss_pred CceeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEEeeeecCccCCCCCCCCChhhHHHhhhcCCCcccccccc
Q 004730 1 MGFFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAYNRTMKGVMSDRDRCSIPLLTLAALLKLAPSLSASVNFH 80 (733)
Q Consensus 1 MGFYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAIN~tI~g~l~ek~~~~iPPl~lsel~kl~PslssS~~l~ 80 (733)
|+|||||+| . .+++.+|.++ |++|||+...+. ++ .+ ..+..+
T Consensus 7 M~~~D~hvh---~------------~e~~~~A~~~-~~~i~itdH~~~-~~--------~~--~~~~~l----------- 48 (212)
T 1v77_A 7 VKFIEMDIR---D------------KEAYELAKEW-FDEVVVSIKFNE-EV--------DK--EKLREA----------- 48 (212)
T ss_dssp CCCEEEEEC---S------------HHHHHHHHHH-CSEEEEEEEESS-CC--------CH--HHHHHH-----------
T ss_pred eEEEEeCcC---H------------HHHHHHHHHH-hcEEEEeeccCc-cc--------ch--hhHHHH-----------
Confidence 569999999 1 4678899999 999999887443 11 11 111111
Q ss_pred cccCCCCCCCCceeEEEEEEEeCChhhhhhccCCCCCCccccEEEEecCCHHHHHHHHhcCCCceEEecCCCCCCCCCCH
Q 004730 81 RDLLGVPRCSPFRQYTRLTVFADTIAQCQVLNSGNPVLKTYDLVAVRPLNQSAFDHACEKAEVDIISINFAEKLPFRLKL 160 (733)
Q Consensus 81 ~dllgv~~ssgLrILsRLTIvvsD~sql~~L~s~~k~lkkYDIVAVrP~SEkaFr~ACenldVDIISLD~s~RLPF~LKh 160 (733)
+ .++++ .|+++.+.++.++..+.. ++ + |||++|+|+|.+.++.||++ .||||++|...|.|+.+++
T Consensus 49 ~--------~~~~I-~GvEi~~~~~~~l~~~~~--~~-r-~di~~v~~~~~~~n~~a~~~-~vDII~Hp~~~~~~~~~~~ 114 (212)
T 1v77_A 49 R--------KEYGK-VAILLSNPKPSLVRDTVQ--KF-K-SYLIYVESNDLRVIRYSIEK-GVDAIISPWVNRKDPGIDH 114 (212)
T ss_dssp H--------HHHSC-EEEEEESCCHHHHHHHHH--HC-S-SSEEEEECSCHHHHHHHHHT-TCSEEECTTTTSSSCSCCH
T ss_pred H--------hcCCe-eEEEEecCCHHHHHHHHH--hc-C-cEEEEEEeCCHHHHHHHHhC-CCCEEecccccccCCCCCH
Confidence 0 12567 999999999998775432 11 2 99999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCeEEEEEecccccC-hHHHHHHHHHHHHHHhhcC--CCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHH
Q 004730 161 PMIKAAIERGVYFELTYSDLILD-VQLRRQMISNAKLLVDWTR--GKNLILSSGASSVTELRGPYDVANLSSLLGISMER 237 (733)
Q Consensus 161 klaraAIeRGV~FEI~YSplI~D-s~sRrn~IsNar~LIRaTK--GKnIIISSGA~S~lELRSP~DVINLl~LfGLseee 237 (733)
..+++|.++||+|||+|+++++. ...|++++.|++.+++++| |.+|||||+|.+++++|+|+++++|+..+||++++
T Consensus 115 ~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~G~~~e~ 194 (212)
T 1v77_A 115 VLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVIGMEIPQ 194 (212)
T ss_dssp HHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999998876 6789999999999999998 89999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHh
Q 004730 238 AKAAVSKNCRALISN 252 (733)
Q Consensus 238 AK~ALS~nPrsLL~~ 252 (733)
++.+++.+|+.++.+
T Consensus 195 ~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 195 AKASISMYPEIILKR 209 (212)
T ss_dssp HHHTTTHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999853
No 2
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=98.17 E-value=6.5e-05 Score=72.49 Aligned_cols=214 Identities=15% Similarity=0.133 Sum_probs=124.1
Q ss_pred CceeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEE-eeeecCccCCCCCCCCChhhHHHhhhcCCCccccccc
Q 004730 1 MGFFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAY-NRTMKGVMSDRDRCSIPLLTLAALLKLAPSLSASVNF 79 (733)
Q Consensus 1 MGFYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAI-N~tI~g~l~ek~~~~iPPl~lsel~kl~PslssS~~l 79 (733)
|+++||.+|-...+. +..+ -.+++..|.++||++||+ .|. .. +... .. +.-..++...
T Consensus 1 m~~~DlH~Ht~~Sd~-g~~~----~~e~v~~A~~~Gl~~iaiTDH~-~~-~~~~---~~-~~~~~~~~~~---------- 59 (245)
T 1m65_A 1 MYPVDLHMHTVASTH-AYST----LSDYIAQAKQKGIKLFAITDHG-PD-MEDA---PH-HWHFINMRIW---------- 59 (245)
T ss_dssp -CCEECCBCCTTSTT-CCCC----HHHHHHHHHHHTCCEEEEEEEC-TT-STTC---CC-THHHHGGGGS----------
T ss_pred CCceEeCcCCCCCCC-CCCc----HHHHHHHHHHCCCCEEEECCCC-CC-CCCC---cH-HHHHHHHHHH----------
Confidence 889999999765521 1111 236889999999999999 443 11 1100 00 0000111100
Q ss_pred ccccCCCCCCCCceeEEEEEEEeCChh-hhhhccCCCCCCccccEEEEe-------cCCH----HHHHHHHhcCCCceEE
Q 004730 80 HRDLLGVPRCSPFRQYTRLTVFADTIA-QCQVLNSGNPVLKTYDLVAVR-------PLNQ----SAFDHACEKAEVDIIS 147 (733)
Q Consensus 80 ~~dllgv~~ssgLrILsRLTIvvsD~s-ql~~L~s~~k~lkkYDIVAVr-------P~SE----kaFr~ACenldVDIIS 147 (733)
. ....+++++.++++.+.+.. .+... ..+++++|.+-+. |... +....++....++||.
T Consensus 60 -----~-~~~~~i~v~~G~Ei~~~~~~~~~~~~---~~~~~~ld~vi~~~h~~~~~~~~~~~~~~~~~~~i~~g~~~vla 130 (245)
T 1m65_A 60 -----P-RVVDGVGILRGIEANIKNVDGEIDCS---GKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIATIASGNVHIIS 130 (245)
T ss_dssp -----C-SEETTEEEEEEEEEEBCSTTCCBSCC---HHHHHHCSEEEEECCTTTSCCCCHHHHHHHHHHHHHTSCCSEEC
T ss_pred -----H-HhcCCCeEEEEEEeeeeCCCCchhHH---HHHHhhCCEEEEeecCCccCcchHHHHHHHHHHHHhCCCCCEEE
Confidence 0 01246899999999996521 11110 1123445555432 3332 1222345567899999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhc--CCCcEEEccCCCCCCCCCCHHHHH
Q 004730 148 INFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWT--RGKNLILSSGASSVTELRGPYDVA 225 (733)
Q Consensus 148 LD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaT--KGKnIIISSGA~S~lELRSP~DVI 225 (733)
++...+.+.. ....++.+.+.|+++||+++...... .......+.+.+.. .|.+++++|.|-.+.++.......
T Consensus 131 Hp~~~~~~~~-~~~~~~~~~~~g~~iEvn~~~~~~~~---~g~~~~~~~~~~~~~~~g~~~~~gSDaH~~~~~g~~~~~~ 206 (245)
T 1m65_A 131 HPGNPKYEID-VKAVAEAAAKHQVALEINNSSFLHSR---KGSEDNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECL 206 (245)
T ss_dssp CTTCTTSCCC-HHHHHHHHHHHTCEEEEETTC-------------CHHHHHHHHHHHTCCEEEECCBSSGGGTTCCHHHH
T ss_pred CCCCccchhH-HHHHHHHHHHcCCEEEEECCCCcccC---CCCCCchHHHHHHHHHcCCEEEEECCCCChHHHhhHHHHH
Confidence 9886543321 13568888999999999998874211 00011112222222 377899999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 226 NLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 226 NLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
.++.-+|++..... ..+|..++.
T Consensus 207 ~~~~~~g~~~~~i~---~~~~~~l~~ 229 (245)
T 1m65_A 207 KILDAVDFPPERIL---NVSPRRLLN 229 (245)
T ss_dssp HHHHHTTCCGGGBG---GGCHHHHHH
T ss_pred HHHHHCCCCeEEEE---ECCHHHHHH
Confidence 99999999988754 336666554
No 3
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=97.47 E-value=0.00058 Score=67.19 Aligned_cols=223 Identities=11% Similarity=0.127 Sum_probs=125.0
Q ss_pred CceeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEE-eeeecCccCCCCCCCCChh--hHHHhhhcCCCccccc
Q 004730 1 MGFFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAY-NRTMKGVMSDRDRCSIPLL--TLAALLKLAPSLSASV 77 (733)
Q Consensus 1 MGFYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAI-N~tI~g~l~ek~~~~iPPl--~lsel~kl~PslssS~ 77 (733)
++++|+..|-.+....+..+. ...+++++.|.+.|++.|++ .|...+... ...+.+ ....++...+
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~-e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~----~~~~~~~~~~~~l~~~~~------ 71 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSR-EESKALLAESYRQGVRTIVSTSHRRKGMFE----TPEEKIAENFLQVREIAK------ 71 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSH-HHHHHHHHHHHHTTEEEEECCCEEBTTTBC----CCHHHHHHHHHHHHHHHH------
T ss_pred CCCEEEecccCCCCCCCCCCH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCC----CCHHHHHHHHHHHHHHHH------
Confidence 367899999743310011111 12246899999999999998 554322111 000000 0111111000
Q ss_pred ccccccCCCCCCCCceeEEEEEEEeCChhhhhhccCCC-CCCccccEEEEe--cCC-----HHHHHHHHhcCCCceEEec
Q 004730 78 NFHRDLLGVPRCSPFRQYTRLTVFADTIAQCQVLNSGN-PVLKTYDLVAVR--PLN-----QSAFDHACEKAEVDIISIN 149 (733)
Q Consensus 78 ~l~~dllgv~~ssgLrILsRLTIvvsD~sql~~L~s~~-k~lkkYDIVAVr--P~S-----EkaFr~ACenldVDIISLD 149 (733)
+ ...+++|+.++++.+.+.. ...+.... ..+..-+.+-+. +.+ .+++..+.....++||.++
T Consensus 72 ---~------~~~~i~i~~G~E~~~~~~~-~~~l~~~~~~~l~gs~~vl~e~~~~~~~~~~~~~i~~i~~~g~~~vlaHp 141 (247)
T 2wje_A 72 ---E------VASDLVIAYGAEIYYTPDV-LDKLEKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHI 141 (247)
T ss_dssp ---H------HCTTCEEECCCEEECCTHH-HHHHHTTCSCCGGGSSEEEEECCTTCCHHHHHHHHHHHHTTTCEEEETTG
T ss_pred ---h------cCCCcEEEEeeEEeecHHH-HHHHhcCCccEECCCeEEEEeCCCCcchHHHHHHHHHHHHCCCcEEEEeh
Confidence 0 1236899999999996532 21221100 011111333332 221 3355566667789999988
Q ss_pred CCCCCCCCCCHHHHHHHHHcCeEEEEEeccc--ccC-h---HHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCC-HH
Q 004730 150 FAEKLPFRLKLPMIKAAIERGVYFELTYSDL--ILD-V---QLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG-PY 222 (733)
Q Consensus 150 ~s~RLPF~LKhklaraAIeRGV~FEI~YSpl--I~D-s---~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRS-P~ 222 (733)
-..+. +.-....++.++++|+.+||+++.+ ... + ...+.+.. .+. ..|..+++.|.|-.+.++.. -.
T Consensus 142 ~r~~~-~~~~~~~l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~---~~~--~~gl~~~~GSDaH~~~~~~~~~~ 215 (247)
T 2wje_A 142 ERYDA-LENNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQ---YFL--EQDLVHVIASDMHNLDGRPPHMA 215 (247)
T ss_dssp GGCGG-GTTCHHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHH---HHH--HTTCCSEEECCBCCSSSSCCCHH
T ss_pred hhHHH-HhhCHHHHHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHH---HHH--HCCCeEEEEeCCCCCcccChhHH
Confidence 64332 2234678999999999999999876 432 2 22222221 111 36888999999999977633 34
Q ss_pred HHHHHH-HHhCCCHHHHHHHHHHhHHHHHHh
Q 004730 223 DVANLS-SLLGISMERAKAAVSKNCRALISN 252 (733)
Q Consensus 223 DVINLl-~LfGLseeeAK~ALS~nPrsLL~~ 252 (733)
....++ .-+| .+.+...+..||+.||.+
T Consensus 216 ~a~~~l~~~~G--~~~~~~l~~~n~~~i~~~ 244 (247)
T 2wje_A 216 EAYDLVTQKYG--EAKAQELFIDNPRKIVMD 244 (247)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHHcC
Confidence 455555 4466 666777676899999864
No 4
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=97.42 E-value=0.0016 Score=65.98 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=124.0
Q ss_pred eeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEE-eeeecCccCCCCCCCCChhhHHH-hhhcCCCcccccccc
Q 004730 3 FFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAY-NRTMKGVMSDRDRCSIPLLTLAA-LLKLAPSLSASVNFH 80 (733)
Q Consensus 3 FYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAI-N~tI~g~l~ek~~~~iPPl~lse-l~kl~PslssS~~l~ 80 (733)
++||..+-.+....+..+... .+++++.|.+.||+.|++ .|...+.... ++-.+.+ +..+ .
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~-sl~~~~~a~~~G~~~i~~T~H~~~~~~~~------~~~~i~~~~~~l----------~ 63 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSAD-SIEMARAAVRQGIRTIIATPHHNNGVYKN------EPAAVREAADQL----------N 63 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHH-HHHHHHHHHHTTCCEEECCCBSEETTEEC------CHHHHHHHHHHH----------H
T ss_pred CEEEeecCCCCCCCCCCCHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCC------CHHHHHHHHHHH----------H
Confidence 478887765421111111121 246899999999999999 5543321111 1111111 1100 0
Q ss_pred cccCCCCCCCCceeEEEEEEEeCChhhhhhccCCC-CCCccccEEEEe-c------CCHHHHHHHHhcCCCceEEecCCC
Q 004730 81 RDLLGVPRCSPFRQYTRLTVFADTIAQCQVLNSGN-PVLKTYDLVAVR-P------LNQSAFDHACEKAEVDIISINFAE 152 (733)
Q Consensus 81 ~dllgv~~ssgLrILsRLTIvvsD~sql~~L~s~~-k~lkkYDIVAVr-P------~SEkaFr~ACenldVDIISLD~s~ 152 (733)
... . ....+|+|+.++++.+..... ..+.... ..+...|.|-|. | ...+++..++.+.-++||.++-..
T Consensus 64 ~~~-~-~~~~~i~I~~G~Ev~~~~~~~-~~l~~~~~~~l~~~~~vl~e~~~~~~~~~~~~~l~~i~~~g~v~ILAHPeRy 140 (262)
T 3qy7_A 64 KRL-I-KEDIPLHVLPGQEIRIYGEVE-QDLAKRQLLSLNDTKYILIEFPFDHVPRYAEQLFYDLQLKGYIPVIAHPERN 140 (262)
T ss_dssp HHH-H-HTTCCCEEECCCEEECCTTHH-HHHHTTCSCCGGGSSEEEEECCTTCCCTTHHHHHHHHHHTTCEEEEECGGGC
T ss_pred HHH-H-hcCCCCEEecCeEEecchhHH-HHHhcCCCcEECCceEEEEeCCCccCHHHHHHHHHHHHHCCCcEEEECCCcc
Confidence 000 0 012468999999999864322 1222110 112222333222 2 336677778888999999999632
Q ss_pred CCCCCCCHHHHHHHHHcCeEEEEEecccccC-hHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCC-CCCHHHHHHHHH-
Q 004730 153 KLPFRLKLPMIKAAIERGVYFELTYSDLILD-VQLRRQMISNAKLLVDWTRGKNLILSSGASSVTE-LRGPYDVANLSS- 229 (733)
Q Consensus 153 RLPF~LKhklaraAIeRGV~FEI~YSplI~D-s~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lE-LRSP~DVINLl~- 229 (733)
.. +.-+...+..+++.|+.+||+.+++... +...+.+ ++.++ ..|..+++.|.|-++.. -..-.+...++.
T Consensus 141 ~~-~~~~~~~l~~l~~~G~~iEiN~~s~~g~~g~~~~~~---~~~~~--~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~ 214 (262)
T 3qy7_A 141 RE-IRENPSLLYHLVEKGAASQITSGSLAGIFGKQLKAF---SLRLV--EANLIHFVASDAHNVKTRNFHTQEALYVLEK 214 (262)
T ss_dssp HH-HHHCTHHHHHHHHTTCEEEEEHHHHHTTTCHHHHHH---HHHHH--HTTCCCEEECCBCSSSSSCCCHHHHHHHHHH
T ss_pred cc-ccccHHHHHHHHHCCCEEEEECCccCcccchHHHHH---HHHHH--hCCCeEEEEccCCCCCCCCchHHHHHHHHHH
Confidence 21 1113357889999999999999987642 2222222 22233 26888999999998865 223333444443
Q ss_pred HhCCCHHHHHHHHHHhHHHHHHhh
Q 004730 230 LLGISMERAKAAVSKNCRALISNA 253 (733)
Q Consensus 230 LfGLseeeAK~ALS~nPrsLL~~A 253 (733)
-+|. +.|++ +..||+.||.+.
T Consensus 215 ~~G~--~~a~~-~~~n~~~il~~~ 235 (262)
T 3qy7_A 215 EFGS--ELPYM-LTENAELLLRNQ 235 (262)
T ss_dssp HHCS--HHHHH-HHHHHHHHHTTC
T ss_pred HhCH--HHHHH-HHHHHHHHHCCC
Confidence 3664 56777 669999999764
No 5
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=97.09 E-value=0.011 Score=65.96 Aligned_cols=203 Identities=14% Similarity=0.085 Sum_probs=121.0
Q ss_pred ceeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEE-eeeecCccCCCCCCCCChhhHHH-hhhcCCCccccccc
Q 004730 2 GFFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAY-NRTMKGVMSDRDRCSIPLLTLAA-LLKLAPSLSASVNF 79 (733)
Q Consensus 2 GFYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAI-N~tI~g~l~ek~~~~iPPl~lse-l~kl~PslssS~~l 79 (733)
+++||.+|-...+. ..+ ..+++..|.++||+.||+ .|....... +...+..+.. +..+
T Consensus 327 ~~~DlH~HT~~SDG--~~t----~eemv~~A~~~Gl~~IaiTDH~~~~~~~----~~~~~~~~~~~~~~i---------- 386 (578)
T 2w9m_A 327 LRGMIHTHSTWSDG--GAS----IREMAEATLTLGHEFLGTADHSRAAYYA----NGLTIERLREQLKEI---------- 386 (578)
T ss_dssp CCEEEEECCTTTTC--SSC----HHHHHHHHHHTTCSEEEECEEBTTCGGG----TCBCHHHHHHHHHHH----------
T ss_pred hceEEEecCCccCC--CCC----HHHHHHHHHHCCCeEEEEcCCCCccccc----cCCCHHHHHHHHHHH----------
Confidence 57899999654421 111 236889999999999999 554221100 0011111100 0000
Q ss_pred ccccCCCCCCCCceeEEEEEEEeCChhhhhhccCCCCCCccccEEE--Eec---CCH----HHHHHHHhcCCCceEEecC
Q 004730 80 HRDLLGVPRCSPFRQYTRLTVFADTIAQCQVLNSGNPVLKTYDLVA--VRP---LNQ----SAFDHACEKAEVDIISINF 150 (733)
Q Consensus 80 ~~dllgv~~ssgLrILsRLTIvvsD~sql~~L~s~~k~lkkYDIVA--VrP---~SE----kaFr~ACenldVDIISLD~ 150 (733)
. .+ .+. +|+++.++++.+.+...+.... ..+..+|+|- ++. .+. +.+-.++.+..++||.++.
T Consensus 387 ~-~l---~~~-gi~il~GiEv~i~~~G~ld~~~---~~l~~~D~vI~svH~~~~~~~~~~~~~~~~ai~~g~v~IlaHP~ 458 (578)
T 2w9m_A 387 R-EL---QRA-GLPIVAGSEVDILDDGSLDFPD---DVLGELDYVVVSVHSNFTLDAARQTERLIRAVSHPLVTVLGHAT 458 (578)
T ss_dssp H-HH---HHT-TCCEECEEEEEBCTTSCBSSCH---HHHTTSSEEEEECCSCTTSCHHHHHHHHHHHHTCSSCCEECSTT
T ss_pred H-HH---Hhc-CCeEEEeeeecccCCcchhhHH---HHHhcCCEEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEECcc
Confidence 0 00 011 6899999999987531111111 1233456544 552 222 2223455677899999886
Q ss_pred CC----CCCCCCCH-HHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcC-CCcEEEccCCCCCCCCCCHHHH
Q 004730 151 AE----KLPFRLKL-PMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTR-GKNLILSSGASSVTELRGPYDV 224 (733)
Q Consensus 151 s~----RLPF~LKh-klaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTK-GKnIIISSGA~S~lELRSP~DV 224 (733)
.. +..+..+. ..++.|.++|+++||+.++.-.+. ...+++..+ |.+++++|.|..+.++......
T Consensus 459 ~~~~~~~~~~~~~~~~il~~~~e~g~~lEIN~~~~r~~~---------~~~~~~~a~eGl~i~igSDAH~~~~~~~~~~~ 529 (578)
T 2w9m_A 459 GRLLLRRPGYALDLDAVLGACEANGTVVEINANAARLDL---------DWREALRWRERLKFAINTDAHVPGGLRDARYG 529 (578)
T ss_dssp CCBTTTBCCCCCCHHHHHHHHHHHTCEEEEECSTTTCBS---------CHHHHHHHTTTCCEEEECCCSSGGGGGGHHHH
T ss_pred hhhcCCCcCchhhHHHHHHHHHHCCCEEEEECCCCCcCc---------HHHHHHHHHcCCEEEEECCCCChhhcchHHHH
Confidence 32 22233343 478889999999999998874331 122222222 7889999999999999888888
Q ss_pred HHHHHHhCCCHHHHHHH
Q 004730 225 ANLSSLLGISMERAKAA 241 (733)
Q Consensus 225 INLl~LfGLseeeAK~A 241 (733)
..++.-.|++.+.....
T Consensus 530 ~~~~~~~g~~~~~v~n~ 546 (578)
T 2w9m_A 530 VMQARKAGLTPAHVVNS 546 (578)
T ss_dssp HHHHHHTTCCGGGBGGG
T ss_pred HHHHHHcCCCHHHeeec
Confidence 99999999998876544
No 6
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=97.02 E-value=0.0098 Score=66.16 Aligned_cols=205 Identities=18% Similarity=0.103 Sum_probs=121.8
Q ss_pred ceeeecccCCCCCCCCcccchhhHHHHHHHHHHcCCcEEEE-eeeecCccCCCCCCCCChhhH----HHhhhcCCCcccc
Q 004730 2 GFFDLNIPYVESPPSNATTHKNARVKIVIKAMELGYTGVAY-NRTMKGVMSDRDRCSIPLLTL----AALLKLAPSLSAS 76 (733)
Q Consensus 2 GFYDLNIpwp~~g~st~~~~~~~rlkLL~~A~eLGYsgVAI-N~tI~g~l~ek~~~~iPPl~l----sel~kl~PslssS 76 (733)
+++||.+|-.+++. ..+ ..+++..|.+.||++||+ .|...... .+.+.+-.+ .++...
T Consensus 337 ~~~DlH~HT~~SDG--~~t----~ee~v~~A~~~G~~~iaiTDH~~~~~~----~~gl~~~~~~~~~~~~~~~------- 399 (575)
T 3b0x_A 337 VKGDLQVHSTYSDG--QNT----LEELWEAAKTMGYRYLAVTDHSPAVRV----AGGPSPEEALKRVGEIRRF------- 399 (575)
T ss_dssp CCEEEEECCTTTTC--SCC----HHHHHHHHHHTTCSEEEEEEECTTTTT----SSCSCHHHHHHHHHHHHHH-------
T ss_pred cCeeEeecCCccCC--CCC----HHHHHHHHHHCCCCEEEEcCCCCcccc----ccCCCHHHHHHHHHHHHHH-------
Confidence 58999999765421 111 236889999999999999 55422110 000111111 011100
Q ss_pred cccccccCCCCCCCCceeEEEEEEEeCChhhhhhccCCCCCCccccEE--EEecC---CH----HHHHHHHhcCCCceEE
Q 004730 77 VNFHRDLLGVPRCSPFRQYTRLTVFADTIAQCQVLNSGNPVLKTYDLV--AVRPL---NQ----SAFDHACEKAEVDIIS 147 (733)
Q Consensus 77 ~~l~~dllgv~~ssgLrILsRLTIvvsD~sql~~L~s~~k~lkkYDIV--AVrP~---SE----kaFr~ACenldVDIIS 147 (733)
.. ...+|+++.++++.+.+...+.... .++..+|++ +++.. +. +.+..++.+.-++||.
T Consensus 400 ---~~------~~~~i~i~~G~Ei~~~~dg~l~~~~---~~l~~~d~vL~svH~~~~~~~~~~~~~l~~~i~~g~v~Ila 467 (575)
T 3b0x_A 400 ---NE------THGPPYLLAGAEVDIHPDGTLDYPD---WVLRELDLVLVSVHSRFNLPKADQTKRLLKALENPFVHVLA 467 (575)
T ss_dssp ---HH------HHCSSEEEEEEEEEBCTTSCBSSCH---HHHTTCSEEEEECCSCTTSCHHHHHHHHHHHTTCTTCCEEC
T ss_pred ---HH------hcCCCeEEEEEeecccCCCCchhHH---HHHhhCCEEEEEeeeCCCCCHHHHHHHHHHHHhcCCCeEEE
Confidence 00 0125899999999886421211111 123356654 45532 22 2333455667799999
Q ss_pred ecCCC----CCCCCCCH-HHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHH
Q 004730 148 INFAE----KLPFRLKL-PMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPY 222 (733)
Q Consensus 148 LD~s~----RLPF~LKh-klaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~ 222 (733)
++... +.++..+. ..++.+.++|+++||+.++.-.+.. ..++.. + ...|.+++++|.|..+.++....
T Consensus 468 Hp~~r~~~~r~~~~~~~~~il~~~~~~g~~lEIN~~~~~~~~~--~~~~~~---a--~e~G~~~vigSDAH~~~~~~~~~ 540 (575)
T 3b0x_A 468 HPTARLLGRRAPIEADWEAVFQKAKEKGVAVEIDGYYDRMDLP--DDLARM---A--YGMGLWISLSTDAHQTDHLRFME 540 (575)
T ss_dssp STTCCBTTTBCCCCCCHHHHHHHHHHHTCEEEEECCTTTCBSC--HHHHHH---H--HHTTCCEEEECCBSSGGGGGGHH
T ss_pred CCchhhcCCCcCchHHHHHHHHHHHHcCCEEEEeCCCCcCCch--HHHHHH---H--HHcCCeEEEECCCCChHHhhhHH
Confidence 88632 22333343 4678899999999999988643311 111111 1 12478899999999999998888
Q ss_pred HHHHHHHHhCCCHHHHHHHH
Q 004730 223 DVANLSSLLGISMERAKAAV 242 (733)
Q Consensus 223 DVINLl~LfGLseeeAK~AL 242 (733)
..+.++.-.|++.++...++
T Consensus 541 ~~~~~~~~~g~~~~~v~n~~ 560 (575)
T 3b0x_A 541 LAVGTAQRAWIGPERVLNTL 560 (575)
T ss_dssp HHHHHHHHTTCCSTTBGGGS
T ss_pred HHHHHHHHcCCCHHHeecCC
Confidence 88999999999988765554
No 7
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=96.51 E-value=0.047 Score=53.06 Aligned_cols=95 Identities=22% Similarity=0.272 Sum_probs=58.0
Q ss_pred HHHHhcCCCceEEecCCCC-CCCCC--------CHHHHHHHHHcCeEEEEEecccccCh---HHHHHHHHHHHHHHhhcC
Q 004730 135 DHACEKAEVDIISINFAEK-LPFRL--------KLPMIKAAIERGVYFELTYSDLILDV---QLRRQMISNAKLLVDWTR 202 (733)
Q Consensus 135 r~ACenldVDIISLD~s~R-LPF~L--------KhklaraAIeRGV~FEI~YSplI~Ds---~sRrn~IsNar~LIRaTK 202 (733)
..++.+..++||.++...+ ..... -...++.++++|+.+||+.+.+..+- ...+.++..++ ..
T Consensus 141 ~~~i~~g~~~vlaHp~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~iEvn~~~~~~~~~~~~~~~~~~~~~~-----~~ 215 (267)
T 2yxo_A 141 EKAARSGLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAGLFLDVNTAGLRRPAKEVYPAPALLRRAR-----EL 215 (267)
T ss_dssp HHHHTSSCCSEESCTTGGGTTSCCCCHHHHHHHHHHHHHHHHHHTCEEEEEGGGGGSTTCSCBSCHHHHHHHH-----HH
T ss_pred HHHHhcCCCCEEeCccHHHHhCCCCChHHHHHHHHHHHHHHHHcCCEEEEEchHhcCCCCCCCCCHHHHHHHH-----Hc
Confidence 3445567799999887533 21110 13568889999999999988764421 11222222221 13
Q ss_pred CCcEEEccCCCCCCCCC-CHHHHHHHHHHhCCC
Q 004730 203 GKNLILSSGASSVTELR-GPYDVANLSSLLGIS 234 (733)
Q Consensus 203 GKnIIISSGA~S~lELR-SP~DVINLl~LfGLs 234 (733)
|.+++++|.|-.+.++. .......++.-+|++
T Consensus 216 g~~~~~gSDaH~~~~~~~~~~~a~~~l~~~g~~ 248 (267)
T 2yxo_A 216 GIGLVLGSDAHRPEEVGFAFPEVQALLAGLGFR 248 (267)
T ss_dssp TCCEEEECCBSSGGGTTTTHHHHHHHHHHHTCC
T ss_pred CCCEEEecCCCCHHHHHhhHHHHHHHHHHcCCC
Confidence 78899999999987765 455555555555544
No 8
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=94.43 E-value=0.34 Score=49.19 Aligned_cols=79 Identities=11% Similarity=-0.058 Sum_probs=46.8
Q ss_pred CCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcC-eEEEEEecccccChHHHHHHHHHHHHHHhhcC--CCc
Q 004730 129 LNQSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERG-VYFELTYSDLILDVQLRRQMISNAKLLVDWTR--GKN 205 (733)
Q Consensus 129 ~SEkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRG-V~FEI~YSplI~Ds~sRrn~IsNar~LIRaTK--GKn 205 (733)
..+++++.+.....++||.++...+.+..-....+...++.| ..+||+++.... ... +.+.+..+ |..
T Consensus 172 ~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~--~~~-------~~~~~~a~~~gl~ 242 (292)
T 2yb1_A 172 SLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSL--DDM-------HKFALHADRHGLY 242 (292)
T ss_dssp CHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCH--HHH-------HHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCH--HHH-------HHHHHHHHHcCCc
Confidence 335677777777889999998754322100134455555555 589999997642 122 22333332 666
Q ss_pred EEEccCCCCCC
Q 004730 206 LILSSGASSVT 216 (733)
Q Consensus 206 IIISSGA~S~l 216 (733)
++++|.|-.+.
T Consensus 243 ~t~GSDaH~~~ 253 (292)
T 2yb1_A 243 ASSGSDFHAPG 253 (292)
T ss_dssp EEEECCBCSTT
T ss_pred eEEeeCCCCcC
Confidence 67777777664
No 9
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=93.17 E-value=0.26 Score=48.55 Aligned_cols=128 Identities=8% Similarity=-0.039 Sum_probs=72.6
Q ss_pred CceeEEEEEEEeCChhhhhhccC-CCCCCccccEEEEecCCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHH----HHH
Q 004730 91 PFRQYTRLTVFADTIAQCQVLNS-GNPVLKTYDLVAVRPLNQSAFDHACEKAEVDIISINFAEKLPFRLKLPM----IKA 165 (733)
Q Consensus 91 gLrILsRLTIvvsD~sql~~L~s-~~k~lkkYDIVAVrP~SEkaFr~ACenldVDIISLD~s~RLPF~LKhkl----ara 165 (733)
+|+++.++++.+.+ ...+.+.- ...+.. -....+++++.+.....++||.++...+..+...... ...
T Consensus 101 ~i~v~~G~Ei~~~~-~~~h~l~~~~~~~~~------~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~~~~~~~~~~~ 173 (255)
T 2anu_A 101 GMILIPGVEITNNT-DLYHIVAVDVKEYVD------PSLPVEEIVEKLKEQNALVIAAHPDRKKQDEEHLSWYLWANMER 173 (255)
T ss_dssp SCEEEEEEEEEETT-TTEEEEEESCCSCCC------TTSCHHHHHHHHHHTTCEEEECCCCTTC-----CCCHHHHSTTT
T ss_pred CcEEEEEEEEeeCC-CCeeEEEeccccccC------CCCCHHHHHHHHHHCCCeEEEeCCCccccccccccccccchhhh
Confidence 68899999999863 22222210 011110 0113456666666668899999888654422211000 122
Q ss_pred HHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHH
Q 004730 166 AIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVS 243 (733)
Q Consensus 166 AIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~DVINLl~LfGLseeeAK~ALS 243 (733)
.++.+.++||+-++.+.. +...+|.+++++|.|-++.++....-++ -.+++.+..++|+.
T Consensus 174 ~~~~~~aiEin~~~~~~~--------------~~~~~g~~~~~gSDAH~~~~ig~~~~~~----~~~~t~~~i~~al~ 233 (255)
T 2anu_A 174 FKDTFDAWEIANRDDLFN--------------SVGVKKYRYVANSDFHELWHVYSWKTLV----KSEKNIEAIKEAIR 233 (255)
T ss_dssp TTTTCSEEEEEETTEECH--------------HHHHTTCCEEEECCBCSGGGGSSEEEEE----EECSSHHHHHHHHH
T ss_pred hhccCcEEEEcCCCchhh--------------HHHHcCCceEeccCCCCCcccCCceEEE----ecCCCHHHHHHHHH
Confidence 356899999998764331 1113589999999999988876642211 12566666666654
No 10
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=89.90 E-value=6.1 Score=38.39 Aligned_cols=113 Identities=16% Similarity=0.262 Sum_probs=72.3
Q ss_pred EEEecCC--HHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhc
Q 004730 124 VAVRPLN--QSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWT 201 (733)
Q Consensus 124 VAVrP~S--EkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaT 201 (733)
|.+|..+ +++++.+-+.....+|.+-++. ....++.++++|++|.|+-. ... + + .++.+++..
T Consensus 142 v~iH~~~a~~~~~~il~~~~~~~~v~H~~~g------~~~~~~~~~~~g~~i~~~g~-~~~-~--~-----~~~~~~~~~ 206 (272)
T 2y1h_A 142 VNVHSRSAGRPTINLLQEQGAEKVLLHAFDG------RPSVAMEGVRAGYFFSIPPS-IIR-S--G-----QKQKLVKQL 206 (272)
T ss_dssp EEEECTTCHHHHHHHHHHTTCCSEEEETCCS------CHHHHHHHHHTTCEEEECGG-GGT-C--H-----HHHHHHHHS
T ss_pred EEEEeCCcHHHHHHHHHhCCCCCEEEEccCC------CHHHHHHHHHCCCEEEECCc-ccC-c--H-----HHHHHHHhC
Confidence 4555543 4455544443344666554432 34688999999999988732 222 1 1 356677766
Q ss_pred CCCcEEEccCCCCCCCCC----CHH---HH-HHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 202 RGKNLILSSGASSVTELR----GPY---DV-ANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 202 KGKnIIISSGA~S~lELR----SP~---DV-INLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
...+|+|.|.+....-.| .|. .+ ..++.+.|++.+++.+.+..||+.++.
T Consensus 207 ~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~N~~~l~~ 264 (272)
T 2y1h_A 207 PLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFP 264 (272)
T ss_dssp CGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHST
T ss_pred CHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 667899999987432222 132 23 335567899999999999999998874
No 11
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=78.21 E-value=1.4 Score=44.99 Aligned_cols=58 Identities=10% Similarity=0.111 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCeEEEEEecccccCh-HHHHHHHHHHHHHHhhc--CCCcEEEccCCCCCCCCCCH
Q 004730 160 LPMIKAAIERGVYFELTYSDLILDV-QLRRQMISNAKLLVDWT--RGKNLILSSGASSVTELRGP 221 (733)
Q Consensus 160 hklaraAIeRGV~FEI~YSplI~Ds-~sRrn~IsNar~LIRaT--KGKnIIISSGA~S~lELRSP 221 (733)
...+++|+++|+.+||+-+++..+- .. ....+.+++.. .|.++||+|.|-++.++-.-
T Consensus 208 ~~il~~~~~~g~~lEiN~~~l~~~~~~~----~yp~~~~~~~~~~~g~~i~igSDAH~~~~vg~~ 268 (283)
T 3dcp_A 208 RVILALVKKRDYELDFNTAGLFKPLCGE----TYPPKKIVTLASELQIPFVYGSDSHGVQDIGRG 268 (283)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGSTTCCS----CBSCHHHHHHHHHTTCCEEEECCBSSGGGTTTT
T ss_pred HHHHHHHHHcCCEEEEechHhcCCCCCC----cCCHHHHHHHHHHcCCCEEEEcCCCCHHHHhCh
Confidence 3678999999999999999876431 00 01112333333 47889999999999886443
No 12
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=77.25 E-value=8.7 Score=37.94 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=57.7
Q ss_pred CHHHHHHHHHcCeEEEEEecccc-c-ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCC-------CCC-------C-H
Q 004730 159 KLPMIKAAIERGVYFELTYSDLI-L-DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT-------ELR-------G-P 221 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI-~-Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~l-------ELR-------S-P 221 (733)
....++.++++|++|.|+....+ . ....+. ..+..++.....-.|+++|.+.... .+. + |
T Consensus 205 ~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~---~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~ 281 (314)
T 2vc7_A 205 NIDYIKKIADKGSFIGLDRYGLDLFLPVDKRN---ETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSIT 281 (314)
T ss_dssp CHHHHHHHHHTTCEEEECCTTCTTTSCHHHHH---HHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTT
T ss_pred CHHHHHHHHHcCCEEEEeCCCcccCCCHHHHH---HHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHH
Confidence 35778999999999999953332 1 112222 2334455544467899999995321 121 1 1
Q ss_pred ---HHHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 222 ---YDVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 222 ---~DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
..++..+...|++.++..+.++.||+.++
T Consensus 282 ~~~~~~~~~l~~~g~~~e~~~~~~~~N~~rlf 313 (314)
T 2vc7_A 282 LIFEDTIPFLKRNGVNEEVIATIFKENPKKFF 313 (314)
T ss_dssp HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHh
Confidence 14455556679999999999999998764
No 13
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=76.24 E-value=21 Score=34.30 Aligned_cols=86 Identities=16% Similarity=0.280 Sum_probs=56.8
Q ss_pred CHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCC--CCC----CCC----H----HHH
Q 004730 159 KLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASS--VTE----LRG----P----YDV 224 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S--~lE----LRS----P----~DV 224 (733)
....++.++++|++|.|+ ..+.+ ..|. ..++.+++....-.|++.|.+.- +.. .|+ | +-+
T Consensus 161 ~~~~~~~~~~~g~yi~~~--g~~~~-~~~~---~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~ 234 (264)
T 1xwy_A 161 TREEMQACVAHGIYIGIT--GWVCD-ERRG---LELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHIL 234 (264)
T ss_dssp CHHHHHHHHHTTCEEEEC--GGGGC-TTTS---HHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHH
T ss_pred CHHHHHHHHHCCeEEEEC--ccccC-CcCc---HHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHH
Confidence 356788999999999888 22220 0011 13456676666678999998853 211 221 2 223
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 225 ANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 225 INLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
..++.+.|++.++..+.+..|++.++
T Consensus 235 ~~~a~~~g~~~e~~~~~~~~Na~rl~ 260 (264)
T 1xwy_A 235 QRIAHWRGEDAAWLAATTDANVKTLF 260 (264)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHh
Confidence 34457789999999999999998875
No 14
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=74.97 E-value=10 Score=40.03 Aligned_cols=91 Identities=12% Similarity=0.051 Sum_probs=62.1
Q ss_pred CHHHHHHHHHcCeEEEEEecccc--c--------ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCC--CCCC---C---
Q 004730 159 KLPMIKAAIERGVYFELTYSDLI--L--------DVQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELR---G--- 220 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI--~--------Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~--lELR---S--- 220 (733)
....++.++++|.+++|+-.-.. . ....|.+ ..+.+++....-.|+|||.+... +.-+ +
T Consensus 245 ~~e~a~~~l~~G~~I~f~g~gt~~~f~~~~~~~~~d~~ra~---~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~ 321 (364)
T 3k2g_A 245 DPVYQATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVAR---AILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAF 321 (364)
T ss_dssp CHHHHHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHH---HHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSH
T ss_pred CHHHHHHHHhCCcEEEecCCcccccccccccccccHHHHHH---HHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcch
Confidence 46789999999999999843210 1 1123433 34556666667889999999632 1111 2
Q ss_pred -HHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHh
Q 004730 221 -PYDVANLSSLLGISMERAKAAVSKNCRALISN 252 (733)
Q Consensus 221 -P~DVINLl~LfGLseeeAK~ALS~nPrsLL~~ 252 (733)
+..++.++...|++.++..+.++.||+.++..
T Consensus 322 l~~~~~~~l~~~Gis~eei~~~~~~Np~rlf~l 354 (364)
T 3k2g_A 322 VTKHFLPRLRRHGLDDAALETLMVTNPRRVFDA 354 (364)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC
Confidence 23455566678999999999999999998743
No 15
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=73.83 E-value=12 Score=39.48 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=63.6
Q ss_pred CHHHHHHHHHcCeEEEEEeccc--cc-------ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCC--C---CH---
Q 004730 159 KLPMIKAAIERGVYFELTYSDL--IL-------DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL--R---GP--- 221 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSpl--I~-------Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lEL--R---SP--- 221 (733)
....++.++++|.+++|+-... .. ....|.+ ..+.+++....-.|+|||.+....-. | +|
T Consensus 236 ~~e~a~~~l~~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~---~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l 312 (365)
T 3rhg_A 236 DIDYQCKMLDRGVWLEFDMIGLDISFPKEGAAPSVMDTVE---AVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFV 312 (365)
T ss_dssp CHHHHHHHHHTTCEEEECCTTCCCBCSSSCBCCCHHHHHH---HHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHH
T ss_pred CHHHHHHHHhCCCEEEecCCCccccccccccccchHHHHH---HHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhH
Confidence 4568899999999999986421 11 1123444 33556666667889999998753211 1 22
Q ss_pred -HHHHHHHHHhCCCHHHHHHHHHHhHHHHHHh
Q 004730 222 -YDVANLSSLLGISMERAKAAVSKNCRALISN 252 (733)
Q Consensus 222 -~DVINLl~LfGLseeeAK~ALS~nPrsLL~~ 252 (733)
..++.++.+.|++.+++.+.++.||+.++..
T Consensus 313 ~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~l 344 (365)
T 3rhg_A 313 PNVFLSLLAQRGIDKTIIDKLCIDNPANLLAA 344 (365)
T ss_dssp HHTHHHHHHHTTCCHHHHHHHTTHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCC
Confidence 3456677888999999999999999999854
No 16
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=73.79 E-value=68 Score=31.29 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=69.4
Q ss_pred EEEecCC--HHHHHHHHhcC--CCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHh
Q 004730 124 VAVRPLN--QSAFDHACEKA--EVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVD 199 (733)
Q Consensus 124 VAVrP~S--EkaFr~ACenl--dVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIR 199 (733)
|.+++.. +.+++.+-.-. ..-+|-+- |.-....++.++++|++|.|+-.-...+. ..++.+++
T Consensus 136 v~iH~~~~~~~~~~il~~~p~~~~~~I~H~------~~g~~~~~~~~~~~g~y~~~sg~~~~~~~-------~~l~~~i~ 202 (268)
T 1j6o_A 136 LVVHIRDAYSEAYEILRTESLPEKRGVIHA------FSSDYEWAKKFIDLGFLLGIGGPVTYPKN-------EALREVVK 202 (268)
T ss_dssp EEEEEESCHHHHHHHHHHSCCCSSCEEETT------CCSCHHHHHHHHHHTEEEEECGGGGCTTC-------HHHHHHHH
T ss_pred EEEEeCchHHHHHHHHHhcCCCCCCEEEEc------CCCCHHHHHHHHHCCCeEEecccccccch-------HHHHHHHH
Confidence 4455432 44555444434 45555542 22345678888889999988722111111 13456666
Q ss_pred hcCCCcEEEccCCCCCC--CCCC----HH---H-HHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 200 WTRGKNLILSSGASSVT--ELRG----PY---D-VANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 200 aTKGKnIIISSGA~S~l--ELRS----P~---D-VINLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
....-.|++.|.+.-.. ..|+ |. . +-.++.+.|++.++..+.+..|++.++.
T Consensus 203 ~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la~~~~~~~e~~~~i~~~Na~rlf~ 264 (268)
T 1j6o_A 203 RVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFL 264 (268)
T ss_dssp HHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhC
Confidence 66767899999885321 1121 22 2 3344466899999999999999988863
No 17
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=71.09 E-value=66 Score=33.68 Aligned_cols=130 Identities=9% Similarity=0.102 Sum_probs=93.5
Q ss_pred EEecCCHHHHHHHHhcCCCc-eEEecCCC---CCCCCCCHHHHHHHHHcCeEEEEEecccccC---hHHHHHHHHHHHHH
Q 004730 125 AVRPLNQSAFDHACEKAEVD-IISINFAE---KLPFRLKLPMIKAAIERGVYFELTYSDLILD---VQLRRQMISNAKLL 197 (733)
Q Consensus 125 AVrP~SEkaFr~ACenldVD-IISLD~s~---RLPF~LKhklaraAIeRGV~FEI~YSplI~D---s~sRrn~IsNar~L 197 (733)
-+-=.+++.|..+++-.+.- |+|+--.. ..|--+.-.++++..++|-.+.|++.+.+.. ...-..++.++..+
T Consensus 156 DlSH~s~~~~~dvl~~s~~Pvi~SHsn~~al~~h~RNl~De~irala~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i 235 (325)
T 2i5g_A 156 DLSHVGSKTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYV 235 (325)
T ss_dssp ECTTBCHHHHHHHHHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHH
T ss_pred EcCcCCHHHHHHHHHHhCCCEEEeCCCccccCCCCCCCCHHHHHHHHHcCCeEEEeecchhcCCCCCCCHHHHHHHHHHH
Confidence 33336888898888855544 66665432 2233466789999999999999998876643 12234455666666
Q ss_pred HhhcCCCcEEEccCC----------------------------CCCCCCCCHHHHHHHHHHh---CCCHHHHHHHHHHhH
Q 004730 198 VDWTRGKNLILSSGA----------------------------SSVTELRGPYDVANLSSLL---GISMERAKAAVSKNC 246 (733)
Q Consensus 198 IRaTKGKnIIISSGA----------------------------~S~lELRSP~DVINLl~Lf---GLseeeAK~ALS~nP 246 (733)
+....-..|-|.|.= ..+.++.++.++-+|..-| |.++++..+.+..|.
T Consensus 236 ~~~~G~dhVgiGsDf~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~gl~~~~~~~~l~~~L~~~G~se~~i~ki~g~N~ 315 (325)
T 2i5g_A 236 MNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLGIRTVGEFPNLTETLLKRGMPERVVRKVMGENW 315 (325)
T ss_dssp HHHHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBTCSSGGGTHHHHHHHHHTTCCHHHHHHHHTHHH
T ss_pred HHhcCCceEEECCcCcccccccchhhhcccccccccccccCCCCCcccCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 666666788888875 3555788888888887644 999999999999999
Q ss_pred HHHHHhhh
Q 004730 247 RALISNAL 254 (733)
Q Consensus 247 rsLL~~Al 254 (733)
..++...+
T Consensus 316 lRvl~~v~ 323 (325)
T 2i5g_A 316 VRVLRDVW 323 (325)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887653
No 18
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=70.85 E-value=17 Score=37.15 Aligned_cols=89 Identities=18% Similarity=0.142 Sum_probs=58.1
Q ss_pred CHHHHHHHHHcCeEEEEEe-ccccc---------------ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCC-CCCC---
Q 004730 159 KLPMIKAAIERGVYFELTY-SDLIL---------------DVQLRRQMISNAKLLVDWTRGKNLILSSGASS-VTEL--- 218 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~Y-SplI~---------------Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S-~lEL--- 218 (733)
....++.++++|++|.|+. +.... ....|.+ .++.+++....-.|+|+|.+.. ....
T Consensus 202 ~~e~a~~~~~~G~~i~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~p~drilleTD~p~~l~~~~~~ 278 (330)
T 2ob3_A 202 DLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRAL---LIKALIDQGYMKQILVSNDWTFGFSSYVTN 278 (330)
T ss_dssp CHHHHHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHH---HHHHHHHTTCGGGEEECCCCCSEECSSSTT
T ss_pred CHHHHHHHHhCCCEEEeCCCccccccccccccccccccCCCHHHHHH---HHHHHHHhCCCCeEEEeCCCCCCccccccc
Confidence 3579999999999999985 32222 1112322 3455666666688999999875 2111
Q ss_pred CC----------H-HHHHHH-HHH--hCCCHHHHHHHHHHhHHHHH
Q 004730 219 RG----------P-YDVANL-SSL--LGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 219 RS----------P-~DVINL-l~L--fGLseeeAK~ALS~nPrsLL 250 (733)
|+ + +-+..+ ..+ .|++.+++.+.++.||+.++
T Consensus 279 ~g~~~~~n~pn~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf 324 (330)
T 2ob3_A 279 IMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFL 324 (330)
T ss_dssp HHHHHHHHCTTGGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred CCCcccccCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 11 1 112332 334 79999999999999998877
No 19
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=70.39 E-value=23 Score=33.97 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=68.1
Q ss_pred EEEecCC--HHHHHHHHhc-CCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhh
Q 004730 124 VAVRPLN--QSAFDHACEK-AEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDW 200 (733)
Q Consensus 124 VAVrP~S--EkaFr~ACen-ldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRa 200 (733)
|.+|..+ +.+++.+-+. ..+.+|.+-+ .-....++.++++|++|.|. ..+.-. |. ...+.+++.
T Consensus 130 v~iH~~~a~~~~~~il~~~~~~~~~i~H~~------~g~~~~~~~~~~~g~~i~~~--g~~~~~--~~---~~~~~~~~~ 196 (259)
T 1zzm_A 130 VILHSRRTHDKLAMHLKRHDLPRTGVVHGF------SGSLQQAERFVQLGYKIGVG--GTITYP--RA---SKTRDVIAK 196 (259)
T ss_dssp EEEEEESCHHHHHHHHHHHCCTTCEEETTC------CSCHHHHHHHHHTTCEEEEC--GGGGCT--TT---CSHHHHHHH
T ss_pred EEEEecccHHHHHHHHHhcCCCCCEEEEcC------CCCHHHHHHHHHCCCEEEEC--ceeecc--cc---HHHHHHHHh
Confidence 5566542 3444433332 2345665322 23356788999999999875 333210 10 123455665
Q ss_pred cCCCcEEEccCCCCCC--CCC----CHH----HHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 201 TRGKNLILSSGASSVT--ELR----GPY----DVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 201 TKGKnIIISSGA~S~l--ELR----SP~----DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
...-.|+++|.+.-.. -.| .|. -+..++.+.|++.++..+.++.|++.++
T Consensus 197 ~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~Na~rl~ 256 (259)
T 1zzm_A 197 LPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLF 256 (259)
T ss_dssp SCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHh
Confidence 6667899999885321 111 232 2244556889999999999999998875
No 20
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=67.76 E-value=15 Score=38.99 Aligned_cols=89 Identities=19% Similarity=0.128 Sum_probs=59.8
Q ss_pred CHHHHHHHHHcCeEEEEEecc---cccC--hHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCC-----H-------
Q 004730 159 KLPMIKAAIERGVYFELTYSD---LILD--VQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG-----P------- 221 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSp---lI~D--s~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRS-----P------- 221 (733)
....++.++++|++++++.-- .+.. ...|.+ .++.|++..+...|+||..+...+-.|. |
T Consensus 246 d~~~~~~~l~~G~yl~fD~iG~~~~~~~p~d~~r~~---~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~ 322 (360)
T 3tn4_A 246 DPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVR---TLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKN 322 (360)
T ss_dssp CHHHHHHHHTTTCEEEECCTTCCCSTTCCCHHHHHH---HHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTT
T ss_pred CHHHHHHHHHcCCEEEEcccccccccCCCChHHHHH---HHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCC
Confidence 457789999999999987421 1111 234433 4567888888889999999844322221 1
Q ss_pred ----H---HHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 222 ----Y---DVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 222 ----~---DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
+ +++..+.--|++.++..+.+..||+.++
T Consensus 323 ~~y~~i~~~~ip~L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 323 WHVEHLFVNIIPALKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp CSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred CCchhHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHh
Confidence 2 2333333459999999999999999875
No 21
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=66.86 E-value=26 Score=33.80 Aligned_cols=89 Identities=17% Similarity=0.100 Sum_probs=56.6
Q ss_pred CHHHHHHHHHcCeEEEEEecccc--cChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCC-----CCHHH----HHHH
Q 004730 159 KLPMIKAAIERGVYFELTYSDLI--LDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL-----RGPYD----VANL 227 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI--~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lEL-----RSP~D----VINL 227 (733)
....++.++++|++|.++-...+ .....+. ..++.+++...--.|+++|.+....-. ..|.. ++..
T Consensus 191 ~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (291)
T 1bf6_A 191 NLDNILKMIDLGAYVQFDTIGKNSYYPDEKRI---AMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQ 267 (291)
T ss_dssp CHHHHHHHHHTTCEEEECCTTCTTTSCHHHHH---HHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHHHH
T ss_pred CHHHHHHHHHCCCEEEEccCcccCCCCHHHHH---HHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHHHH
Confidence 45788999999999998733211 1111222 234556655555779999988653111 11223 3344
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHH
Q 004730 228 SSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 228 l~LfGLseeeAK~ALS~nPrsLL 250 (733)
+...|++.++..+.++.||+.++
T Consensus 268 l~~~g~~~~~~~~~~~~N~~rl~ 290 (291)
T 1bf6_A 268 LRQSGFSQADVDVMLRENPSQFF 290 (291)
T ss_dssp HHHTTCCHHHHHHHHTHHHHHHC
T ss_pred HHHcCCCHHHHHHHHHHhHHHHh
Confidence 45679999999999999998764
No 22
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=64.25 E-value=37 Score=32.40 Aligned_cols=87 Identities=13% Similarity=0.181 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCC--CCCC----CHHH---H-HHH
Q 004730 158 LKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELR----GPYD---V-ANL 227 (733)
Q Consensus 158 LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~--lELR----SP~D---V-INL 227 (733)
.....++..+++|++|.++-.-..... ..++.+++.....+|++.|.+... ...| .|.. + ..+
T Consensus 159 ~~~~~~~~~~~~g~~~~~sg~~~~~~~-------~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l 231 (265)
T 1yix_A 159 EDRETAGKLLDLGFYISFSGIVTFRNA-------EQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYM 231 (265)
T ss_dssp SCHHHHHHHHTTTCEEEECGGGGSTTC-------HHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHCCcEEEECCccccCch-------HHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHH
Confidence 445678888999999999842111111 123456665555779999988542 1111 2322 2 234
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 228 SSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 228 l~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
+.+.|++.++..+.+..|++.++.
T Consensus 232 ~~~~~~~~~~~~~i~~~Na~rl~~ 255 (265)
T 1yix_A 232 AVLKGVAVEELAQVTTDNFARLFH 255 (265)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHhCcCHHHHHHHHHHHHHHHhC
Confidence 456899999999999999988874
No 23
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=58.09 E-value=1.3e+02 Score=28.54 Aligned_cols=109 Identities=21% Similarity=0.256 Sum_probs=65.8
Q ss_pred HHHHHHHHhcC--CCceEEecCCCCCCCCCCHHHHHHHHH-cCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEE
Q 004730 131 QSAFDHACEKA--EVDIISINFAEKLPFRLKLPMIKAAIE-RGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLI 207 (733)
Q Consensus 131 EkaFr~ACenl--dVDIISLD~s~RLPF~LKhklaraAIe-RGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnII 207 (733)
..+++.+-.-. ++.+|-.-++. ....++.+++ .|++|+++-.....+. ..++.+++......|+
T Consensus 134 ~~~~~~l~~~p~~~~~~i~H~~~g------~~~~~~~~l~~~~~y~~~sg~~~~~~~-------~~~~~~i~~~~~dril 200 (265)
T 2gzx_A 134 QDCIDILLEEHAEEVGGIMHSFSG------SPEIADIVTNKLNFYISLGGPVTFKNA-------KQPKEVAKHVSMERLL 200 (265)
T ss_dssp HHHHHHHHHTTGGGTCEEETTCCS------CHHHHHHHHHTSCCEEEECGGGGCSSC-------CHHHHHHHHSCTTTEE
T ss_pred HHHHHHHHhcCCCCCcEEEEcCCC------CHHHHHHHHHHCCceEEecceeecCCc-------HHHHHHHHhCChhhEE
Confidence 45555544434 45666433321 2456777778 8999999833222221 1345567766667899
Q ss_pred EccCCCCCC--CCC----CHHH---HH-HHHHHhCCCHHHHHHHHHHhHHHHHHh
Q 004730 208 LSSGASSVT--ELR----GPYD---VA-NLSSLLGISMERAKAAVSKNCRALISN 252 (733)
Q Consensus 208 ISSGA~S~l--ELR----SP~D---VI-NLl~LfGLseeeAK~ALS~nPrsLL~~ 252 (733)
+.|...-.. ..| .|.. ++ .++.+.|++.++..+.+..|++.++.-
T Consensus 201 ~gSD~P~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~~ 255 (265)
T 2gzx_A 201 VETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNL 255 (265)
T ss_dssp ECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC-
T ss_pred EccCCCCCCCcccCCCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCC
Confidence 999885321 111 1322 23 334557999999999999999888743
No 24
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=57.50 E-value=29 Score=36.79 Aligned_cols=89 Identities=24% Similarity=0.206 Sum_probs=60.5
Q ss_pred HHHHHHHH-HcCeEEEEEeccccc--ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCC------C-----CH----
Q 004730 160 LPMIKAAI-ERGVYFELTYSDLIL--DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL------R-----GP---- 221 (733)
Q Consensus 160 hklaraAI-eRGV~FEI~YSplI~--Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lEL------R-----SP---- 221 (733)
...++.++ +.|.++.|+-..... ....|.+ .++.+++....-.|+|||.|.....+ | .|
T Consensus 223 ~~~a~~~l~~~G~yI~f~g~~~~~~~~~~~ra~---~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~ 299 (363)
T 3ovg_A 223 KYYYEKVIKETGVTLCFDGPDRVKYYPDSLLAE---NIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLF 299 (363)
T ss_dssp HHHHHHHHHHHCCEEEECCTTCTTTCCHHHHHH---HHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHH
T ss_pred HHHHHHHHHHCCcEEEECCeeccccCChhHHHH---HHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHH
Confidence 44678888 899999888332111 1222332 34566766677889999999732111 1 33
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 222 YDVANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 222 ~DVINLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
+.+..++.+.|++.+++.+.+..||+.++.
T Consensus 300 ~~~~~~a~~rGis~eei~~it~~Np~rlf~ 329 (363)
T 3ovg_A 300 DRFLPLLKQVGVSKEAIFDILVNNPKRVLA 329 (363)
T ss_dssp HTHHHHHHHHTCCHHHHHHHHTHHHHHHTS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHC
Confidence 455567778899999999999999999873
No 25
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=57.22 E-value=80 Score=31.55 Aligned_cols=84 Identities=11% Similarity=0.066 Sum_probs=56.8
Q ss_pred CHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCC--------------------CC
Q 004730 159 KLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--------------------EL 218 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~l--------------------EL 218 (733)
....++.++++|++|.|+-. ..... . .+.+++....-.|+|.|.+.-.. -.
T Consensus 176 ~~~~~~~~l~~g~yi~~~g~-~~~~~----~----~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~ 246 (301)
T 2xio_A 176 TKEAAAALIDLDLYIGFNGC-SLKTE----A----NLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWE 246 (301)
T ss_dssp CHHHHHHHHHTTCEEEECGG-GSSSH----H----HHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCC
T ss_pred CHHHHHHHHhcCcEEEEccc-ccCCh----H----HHHHHHhCChHHEEEecCCCcccccccccccccccccCccccccc
Confidence 45788999999999999743 22211 1 12566666667899999986421 00
Q ss_pred -------CC-HH---HHH-HHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 219 -------RG-PY---DVA-NLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 219 -------RS-P~---DVI-NLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
|+ |. .++ .++.+.|++.++..+.+..|++.++.
T Consensus 247 ~g~~~~~~n~p~~v~~~~~~ia~l~g~~~e~~~~~~~~Na~rlf~ 291 (301)
T 2xio_A 247 SGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFF 291 (301)
T ss_dssp TTSEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhC
Confidence 11 32 333 44667899999999999999988873
No 26
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=50.82 E-value=1.3e+02 Score=32.15 Aligned_cols=133 Identities=7% Similarity=0.042 Sum_probs=95.8
Q ss_pred EEEEecCCHHHHHHHHhcCCCce-EEecCCC---CCCCCCCHHHHHHHHHcCeEEEEEecccccC---hHHHHHHHHHHH
Q 004730 123 LVAVRPLNQSAFDHACEKAEVDI-ISINFAE---KLPFRLKLPMIKAAIERGVYFELTYSDLILD---VQLRRQMISNAK 195 (733)
Q Consensus 123 IVAVrP~SEkaFr~ACenldVDI-ISLD~s~---RLPF~LKhklaraAIeRGV~FEI~YSplI~D---s~sRrn~IsNar 195 (733)
||-|-=.+++.|..+++-.+.-| +|+--.. ..|--+.-.++++..++|-.+.|+|.+.... ...-..++.+..
T Consensus 193 ivDlSH~s~~~~~dvl~~s~~PviaSHSn~ral~~h~RNl~De~l~~la~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~ 272 (369)
T 1itu_A 193 LIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLD 272 (369)
T ss_dssp EEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEEECCCHHHHTSSSCCBHHHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHHhcCCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeEEEEechhhcCCCCCCCHHHHHHHHH
Confidence 56777788899999988655554 4444321 1233456789999999999999999876542 122345566666
Q ss_pred HHHhhcCCCcEEEccCC----CCCCCCCCHHHHHHHHHH---hCCCHHHHHHHHHHhHHHHHHhhhh
Q 004730 196 LLVDWTRGKNLILSSGA----SSVTELRGPYDVANLSSL---LGISMERAKAAVSKNCRALISNALR 255 (733)
Q Consensus 196 ~LIRaTKGKnIIISSGA----~S~lELRSP~DVINLl~L---fGLseeeAK~ALS~nPrsLL~~AlR 255 (733)
.++....-..|-|.|.= ..+.+|.++.+.-+|..- -|.++++..+.+..|...++.....
T Consensus 273 hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L~~~G~se~~i~ki~g~N~lRvl~~v~~ 339 (369)
T 1itu_A 273 HIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQ 339 (369)
T ss_dssp HHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHhHhHHHHHHHHHH
Confidence 66766666778888853 345678888888887654 3999999999999999999988653
No 27
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=50.37 E-value=1.4e+02 Score=32.16 Aligned_cols=134 Identities=13% Similarity=0.163 Sum_probs=96.9
Q ss_pred EEEEecCCHHHHHHHHhcCCCce-EEecCCC---CCCCCCCHHHHHHHHHcCeEEEEEecccccCh-------HHHHHHH
Q 004730 123 LVAVRPLNQSAFDHACEKAEVDI-ISINFAE---KLPFRLKLPMIKAAIERGVYFELTYSDLILDV-------QLRRQMI 191 (733)
Q Consensus 123 IVAVrP~SEkaFr~ACenldVDI-ISLD~s~---RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds-------~sRrn~I 191 (733)
||-|-=.+++.|..+++-.+.-| .|+--.. ..|--+.-.++++..++|-.+.|+|.+.+-.. ..-..++
T Consensus 207 ivDlSH~s~~t~~dvl~~s~~PviaSHSnaral~~h~RNl~De~l~ala~~GGvigv~f~~~fl~~~~~~~~~~tl~~~~ 286 (364)
T 3ly0_A 207 MLDLSHLNEKGFDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGLNFATSFLREDGRRSAEMGWEPVL 286 (364)
T ss_dssp EEBCTTBCHHHHHHHHHHCSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEEECCCHHHHSTTCCCCSCCCSHHHH
T ss_pred EEEcCCCCHHHHHHHHHhcCCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcCcEEEEeccHhhhcCCCCCCCCCCHHHHH
Confidence 45566678899999998666554 4443321 12334566899999999999999998865321 1234566
Q ss_pred HHHHHHHhhcCCCcEEEcc---CCCCCCCCCCHHHHHHHHHHh---CCCHHHHHHHHHHhHHHHHHhhhhc
Q 004730 192 SNAKLLVDWTRGKNLILSS---GASSVTELRGPYDVANLSSLL---GISMERAKAAVSKNCRALISNALRK 256 (733)
Q Consensus 192 sNar~LIRaTKGKnIIISS---GA~S~lELRSP~DVINLl~Lf---GLseeeAK~ALS~nPrsLL~~AlRR 256 (733)
.+...++.+..-..|-|.| |...+.+|.++.+.-+|...| |.++++..+.+..|...++..+.+.
T Consensus 287 ~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl~d~s~~p~L~~~L~~rG~se~~i~ki~g~N~lRvl~~~e~~ 357 (364)
T 3ly0_A 287 RHLDHLIDRLGEDHVGMGSDFDGATIPQGIADVTGLPALQAAMRAHGYDEPLMRKLCHENWYGLLERTWGE 357 (364)
T ss_dssp HHHHHHHHHHCTTSEEECCCBTTSCCCTTTCSGGGHHHHHHHHHHHTCCHHHHHHHHTHHHHHHHHHHC--
T ss_pred HHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHhHhHHHHHHHHHhc
Confidence 6666666666666777777 566778889999998887644 9999999999999999999887654
No 28
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=48.05 E-value=38 Score=35.33 Aligned_cols=89 Identities=17% Similarity=0.089 Sum_probs=62.2
Q ss_pred CHHHHHHHHHcCeEEEEEeccc--cc---ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCC----------C-----C
Q 004730 159 KLPMIKAAIERGVYFELTYSDL--IL---DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT----------E-----L 218 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSpl--I~---Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~l----------E-----L 218 (733)
....++.++++|.+++|.-.-. .. ....|.+ .++.+++....-.|+|||.+...+ . -
T Consensus 226 ~~e~a~~~l~~G~~i~~~g~~t~~~~~~p~~~~~~~---~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~ 302 (339)
T 3gtx_A 226 DPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAERLS---VLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKD 302 (339)
T ss_dssp CHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHH---HHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHT
T ss_pred CHHHHHHHHHcCcEEEEccCccccccCCCchHHHHH---HHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCC
Confidence 3578899999999998876421 11 1123433 345677766778899999887531 1 1
Q ss_pred CCH----HHHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 219 RGP----YDVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 219 RSP----~DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
..| +.+..++.+.|++.+++.+.+..||+.++
T Consensus 303 n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf 338 (339)
T 3gtx_A 303 WHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLF 338 (339)
T ss_dssp CSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred CCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 122 45566788889999999999999998875
No 29
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=48.00 E-value=1.4e+02 Score=29.79 Aligned_cols=118 Identities=17% Similarity=0.170 Sum_probs=73.4
Q ss_pred EEEecCCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEeccccc-----------Ch---HHH--
Q 004730 124 VAVRPLNQSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLIL-----------DV---QLR-- 187 (733)
Q Consensus 124 VAVrP~SEkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~-----------Ds---~sR-- 187 (733)
|++|.......+.|.. ..++.|.+=. .+....++.+.++|+++..++..... .. ..|
T Consensus 223 v~~H~~~~~~i~~~~~-~g~~~i~H~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (403)
T 3gnh_A 223 VAAHAHGASGIREAVR-AGVDTIEHAS------LVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDI 295 (403)
T ss_dssp EEEEECSHHHHHHHHH-TTCSEEEECT------TCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHH-hCCCEEecCC------cCCHHHHHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHH
Confidence 6778777777777765 5677776533 35678899999999998876533210 00 000
Q ss_pred -HHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 188 -RQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 188 -rn~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~DVINLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
...+.+++.+++ .|.+|.+.|.+.....--.+..+ .++.-.||+..+|.++.+.+|..++-
T Consensus 296 ~~~~~~~~~~~~~--~Gv~v~~gTD~~~~~~~~~~~e~-~~~~~~gl~~~~al~~aT~~~A~~lg 357 (403)
T 3gnh_A 296 GELQRENFRKALK--AGVKMVYGTDAGIYPHGDNAKQF-AVMVRYGATPLQAIQSATLTAAEALG 357 (403)
T ss_dssp HHHHHHHHHHHHH--HTCEEECCCCBTTBCTTCGGGHH-HHHHHTTCCHHHHHHHTTHHHHHHHT
T ss_pred HHHHHHHHHHHHH--CCCeEEEecCCCCCCCCchHHHH-HHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 011223444443 46788888876322211113333 34455799999999999999987774
No 30
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=47.60 E-value=40 Score=35.17 Aligned_cols=89 Identities=15% Similarity=0.084 Sum_probs=58.3
Q ss_pred CHHHHHHHHHcCeEEEEEeccccc--ChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCC------CCHHHH----H-
Q 004730 159 KLPMIKAAIERGVYFELTYSDLIL--DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL------RGPYDV----A- 225 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI~--Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lEL------RSP~DV----I- 225 (733)
....++.++++|.+++|+-..... ....|. ..++.+++....-.|+|||.+....-+ .++..+ +
T Consensus 221 ~~e~a~~~l~~G~~i~~~g~~t~~~~~~~~~~---~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~ 297 (330)
T 3pnz_A 221 DPYYHKQVAKTGAFMSFDGIAKIKYAPESARI---AAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVP 297 (330)
T ss_dssp CHHHHHHHHTTTCEEEECCTTCTTTCCHHHHH---HHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHH
T ss_pred CHHHHHHHHHcCcEEEEccCcccCCCChHHHH---HHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHH
Confidence 356888999999999988542221 112232 334566666667789999998753211 112122 2
Q ss_pred HH---HHHhCCCHHH-HHHHHHHhHHHHH
Q 004730 226 NL---SSLLGISMER-AKAAVSKNCRALI 250 (733)
Q Consensus 226 NL---l~LfGLseee-AK~ALS~nPrsLL 250 (733)
.| +.+-|++.++ ..+.++.||+.++
T Consensus 298 ~l~~~a~~~Gis~ee~i~~~t~~Np~rlf 326 (330)
T 3pnz_A 298 RFIDEANEKGFDGEKLVKKFFVDNPARCF 326 (330)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHTHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhHHHHh
Confidence 23 3678999998 9999999998876
No 31
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=47.26 E-value=87 Score=31.88 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=59.0
Q ss_pred CHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCC--CC----CC----HH---HH-
Q 004730 159 KLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--EL----RG----PY---DV- 224 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~l--EL----RS----P~---DV- 224 (733)
....++.+++.|++|-|. +.+.... |. ...+.+++..+.-.|++.|-+.-.. .. |+ |. .+
T Consensus 163 ~~e~a~~~l~~G~yis~~-g~i~~~k--~~---~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~ 236 (287)
T 3rcm_A 163 EREALFAYLDLDLHIGIT-GWICDER--RG---THLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVL 236 (287)
T ss_dssp CHHHHHHHHHTTCEEEEC-GGGGCTT--TC---GGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHH
T ss_pred CHHHHHHHHHCCcEEEEC-chhcccc--CH---HHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHH
Confidence 467899999999999887 3333210 00 1335667777777899999876422 11 21 32 33
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 225 ANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 225 INLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
..++.+.|++.++..+.++.|++.++.
T Consensus 237 ~~lA~~~g~s~eev~~~~~~N~~rlf~ 263 (287)
T 3rcm_A 237 REVALHRGESAEHTAAHTTATARDFFQ 263 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHC
Confidence 444568899999999999999998874
No 32
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=44.23 E-value=1.5e+02 Score=29.49 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=67.0
Q ss_pred EEEec-------CCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHH
Q 004730 124 VAVRP-------LNQSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKL 196 (733)
Q Consensus 124 VAVrP-------~SEkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~ 196 (733)
|++|. .+.+.++.|.+ ..++.|++ .. ..+-.+....++.+.++|+++ +.... ++. +..-...++.
T Consensus 190 v~~H~~~~~~~~~~~~~i~~~~~-~G~~~i~H-~~-~~~~~~~~~~~~~~~~~g~~v-l~~~~---~g~-~~~~~~~~~~ 261 (386)
T 2vun_A 190 VQMHTGGTSIPGSSTVTADDVIK-TKPDVVSH-IN-GGPTAISVQEVDRIMDETDFA-MEIVQ---CGN-PKIADYVARR 261 (386)
T ss_dssp EEEECSCCSCSTTCSCCHHHHHH-HCCSEEET-TT-CSSSCCCHHHHHHHHHHCCCE-EEEES---SSC-HHHHHHHHHH
T ss_pred EEEecCCccccccCHHHHHHHHH-cCCCEEEE-cc-CCCCCCCHHHHHHHHHcCCeE-EEecc---CCc-ccccHHHHHH
Confidence 56777 33344444443 45677766 22 111235678899999999988 22111 221 1122233344
Q ss_pred HHhhcCCC--cEEEccCCCCC---CCCCCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 197 LVDWTRGK--NLILSSGASSV---TELRGPYDVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 197 LIRaTKGK--nIIISSGA~S~---lELRSP~DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
+++. |. +++|+|.+... +..-.+...+.++...||+.+++.++++.||..++
T Consensus 262 ~~~~--g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~~~~ls~~~~~~~~T~n~A~~l 318 (386)
T 2vun_A 262 AAEK--GQLGRVIFGNDAPSGTGLIPLGILRNMCQIASMSDIDPEVAVCMATGNSTAVY 318 (386)
T ss_dssp HHHH--TCGGGEEEECCBSBTTBBCTTHHHHHHHHHHHHSCCCHHHHHHHHTHHHHHHH
T ss_pred HHHc--CCCceeEEecCCCCCCCCCcchhHHHHHHHHhhcCCCHHHHHHHHhHHHHHHc
Confidence 4432 55 78999887311 11112334444455579999999999999998776
No 33
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=39.09 E-value=1.6e+02 Score=29.45 Aligned_cols=84 Identities=20% Similarity=0.389 Sum_probs=59.2
Q ss_pred CHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCC----HHH----HHHHHHH
Q 004730 159 KLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG----PYD----VANLSSL 230 (733)
Q Consensus 159 KhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRS----P~D----VINLl~L 230 (733)
...+++.+++.|++|-|. ..+... ...+.+++..+--.|++-|.+.-. ..|+ |.. +..++.+
T Consensus 153 ~~e~a~~~l~~G~yis~~--g~~~~~-------~~~~~~v~~ip~drlLlETD~P~~-~~rg~~n~P~~v~~v~~~iA~~ 222 (254)
T 3gg7_A 153 SVTELRRAISLGCWFSVG--PTMVRT-------QKGAALIRSMPRDRVLTETDGPFL-ELDGQAALPWDVKSVVEGLSKI 222 (254)
T ss_dssp CHHHHHHHHHTTCEEEEC--HHHHTS-------HHHHHHHHHSCGGGEEECCCTTTS-EETTEECCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCcEEEEC--cccCch-------HHHHHHHHHcCCCeEEEeCCCCcc-ccCCCCCCHHHHHHHHHHHHHH
Confidence 457899999999998555 333211 134567777777779999888632 2232 333 3456678
Q ss_pred hCCCHHHHHHHHHHhHHHHHHh
Q 004730 231 LGISMERAKAAVSKNCRALISN 252 (733)
Q Consensus 231 fGLseeeAK~ALS~nPrsLL~~ 252 (733)
.|++.++..+.+..|++.++.-
T Consensus 223 ~g~~~ee~~~~~~~N~~~lf~~ 244 (254)
T 3gg7_A 223 WQIPASEVERIVKENVSRLLGT 244 (254)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHC
T ss_pred hCcCHHHHHHHHHHHHHHHHCC
Confidence 8999999999999999988753
No 34
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=38.37 E-value=1e+02 Score=29.59 Aligned_cols=113 Identities=11% Similarity=0.117 Sum_probs=68.1
Q ss_pred ccc-c-EEEEecCC------HHHHHHHHhc-CCCceEEecCCCCCCCCCCHHHHHHHHH-cCeEEEEEecccccChHHHH
Q 004730 119 KTY-D-LVAVRPLN------QSAFDHACEK-AEVDIISINFAEKLPFRLKLPMIKAAIE-RGVYFELTYSDLILDVQLRR 188 (733)
Q Consensus 119 kkY-D-IVAVrP~S------EkaFr~ACen-ldVDIISLD~s~RLPF~LKhklaraAIe-RGV~FEI~YSplI~Ds~sRr 188 (733)
..+ + .|.++++. ...+...+.. +++- |.+.......+ ...+..+.+ +|++|.++-. .. .
T Consensus 140 ~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~l~-iv~~H~G~~~~---~~~~~~~~~~~~~y~~~s~~--~~-~---- 208 (272)
T 3cjp_A 140 MDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVP-VILGHMGGSNW---MTAVELAKEIQNLYLDTSAY--FS-T---- 208 (272)
T ss_dssp HHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSC-EEEGGGGGGGH---HHHHHHHHHCTTEEEECTTC--SC-H----
T ss_pred HhccCCcEEEeCCCCCccccHHHHHHHHHHCCCce-EEEECCCCccH---HHHHHHHHhCCCEEEEeccc--cc-H----
Confidence 445 4 46788874 2333333333 4444 34444432211 123333333 7999887522 11 1
Q ss_pred HHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 004730 189 QMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSKNCRALI 250 (733)
Q Consensus 189 n~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~DVINLl~LfGLseeeAK~ALS~nPrsLL 250 (733)
..++.+++... -.|++.|..... .|.........+|++.++..+.+..|++.++
T Consensus 209 ---~~~~~~~~~~~-dril~gSD~P~~----~~~~~~~~~~~~~l~~~~~~~i~~~Na~rl~ 262 (272)
T 3cjp_A 209 ---FVLKIVINELP-LKCIFGTDMPFG----DLQLSIEAIKKMSNDSYVANAVLGDNISRLL 262 (272)
T ss_dssp ---HHHHHHHHHST-TTEECCCCTTSS----CHHHHHHHHHHHCSSHHHHHHHHTHHHHHHH
T ss_pred ---HHHHHHHHhCC-CeEEEeCCCCCC----ChHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 23456666665 789999998543 5666666666689999999999999998876
No 35
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=30.08 E-value=69 Score=32.42 Aligned_cols=101 Identities=10% Similarity=-0.057 Sum_probs=61.8
Q ss_pred cccEEEEecCCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHh
Q 004730 120 TYDLVAVRPLNQSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVD 199 (733)
Q Consensus 120 kYDIVAVrP~SEkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIR 199 (733)
+.--|.|---+...++.++.. +|++.+.+....+- . ..++..|.++||.+ +.|+|+-.+.-....=.+-+.-.++
T Consensus 183 kir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~-~-~~l~~~~~~~gi~v-~a~spL~~G~L~~~~g~t~aqvaL~ 257 (292)
T 4exb_A 183 LIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERA-E-RPVIEYAAAHAKGI-LVKKALASGHACLGAGQDPVRASFE 257 (292)
T ss_dssp SEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCT-T-HHHHHHHHHTTCEE-EEECCSCC--------CCHHHHHHH
T ss_pred CceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCC-H-HHHHHHHHHCCcEE-EEeccccCCccCCCCCCCHHHHHHH
Confidence 445566666677777777776 88888877533221 1 58999999999998 6799987653222111233445666
Q ss_pred hcCCCc--EEEccCCCCCCCCCCHHHHH
Q 004730 200 WTRGKN--LILSSGASSVTELRGPYDVA 225 (733)
Q Consensus 200 aTKGKn--IIISSGA~S~lELRSP~DVI 225 (733)
+.-.++ .++-.|++++-+|+.=.++.
T Consensus 258 w~l~~~~v~~vI~g~~~~~~l~en~~a~ 285 (292)
T 4exb_A 258 LVFDQPGVAAAIVGTINPLHLAHNVAMA 285 (292)
T ss_dssp HHHHSTTCCEEEECCCCHHHHHHHHHHH
T ss_pred HHHhCCCCeEEEeCCCCHHHHHHHHHHh
Confidence 654333 56666777776665544433
No 36
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=26.42 E-value=4.1e+02 Score=28.82 Aligned_cols=131 Identities=14% Similarity=0.135 Sum_probs=91.7
Q ss_pred EEEEecCCHHHHHHHHhcCCCc-eEEecCCC---CCCCCCCHHHHHHHHHcCeEEEEEecccccCh--------------
Q 004730 123 LVAVRPLNQSAFDHACEKAEVD-IISINFAE---KLPFRLKLPMIKAAIERGVYFELTYSDLILDV-------------- 184 (733)
Q Consensus 123 IVAVrP~SEkaFr~ACenldVD-IISLD~s~---RLPF~LKhklaraAIeRGV~FEI~YSplI~Ds-------------- 184 (733)
||-|-=.+++.|..+++-.+.- |.|+--.. ..|--+.-.++++..++|-.+.|+|. .+...
T Consensus 224 ivDlSH~s~~t~~dvl~~s~~PvIaSHSnaral~~hpRNl~De~l~~la~~GGvigv~f~-fl~~~~~~~~~~~~~~~~~ 302 (417)
T 2rag_A 224 VIDVSHASDDVVDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSI-YLTDTTPSPERKAALEALG 302 (417)
T ss_dssp EEBCTTBCHHHHHHHHHHCSSCCEEEEEEETTTSCCTTEECHHHHHHHHHTTCEEEECSS-SSSCCCCCCC---------
T ss_pred EEECCCCCHHHHHHHHHhcCCCeEEecCchHhhCCCCCCCCHHHHHHHHHcCCEEEEEEE-EecCcccchhhhhhhhhhh
Confidence 4556667788888888865555 55554421 12333566889999999999999998 65432
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEEccC---CCCCCCCCCHHHHHHHHHH
Q 004730 185 -------------------------------QLRRQMISNAKLLVDWTRGKNLILSSG---ASSVTELRGPYDVANLSSL 230 (733)
Q Consensus 185 -------------------------------~sRrn~IsNar~LIRaTKGKnIIISSG---A~S~lELRSP~DVINLl~L 230 (733)
..-..++.+...++....-..|-|.|. ...+..+.++.+.-+|..-
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~atl~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~gl~dvs~~p~L~~~ 382 (417)
T 2rag_A 303 RAPDMKTATPEAVKAYADKRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDGFEDITDLPKITAR 382 (417)
T ss_dssp -CCCTTTSCHHHHHHHHHHHHHHHHHSCCCCCBHHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBTBSSGGGTHHHHHH
T ss_pred hccccccccccchhhhhhhhhhhhhccCCCCCCHHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCCCCCHHHHHHHHHH
Confidence 011234455555666666677888883 4445677888888888754
Q ss_pred h---CCCHHHHHHHHHHhHHHHHHhhh
Q 004730 231 L---GISMERAKAAVSKNCRALISNAL 254 (733)
Q Consensus 231 f---GLseeeAK~ALS~nPrsLL~~Al 254 (733)
| |.++++..+.+..|...++....
T Consensus 383 Ll~rG~se~di~ki~g~N~lRvl~~v~ 409 (417)
T 2rag_A 383 LKAEGYSDADIEAIWSGNVLRIVDAAQ 409 (417)
T ss_dssp HHHTTCCHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3 99999999999999988888764
No 37
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=26.06 E-value=92 Score=31.32 Aligned_cols=117 Identities=10% Similarity=0.047 Sum_probs=69.3
Q ss_pred EEEecCCHHHHHHHHhcCCCceEEecCCCCCCCCCCHHHHHHHHHcCeEEEEE---------------ecccccC--hHH
Q 004730 124 VAVRPLNQSAFDHACEKAEVDIISINFAEKLPFRLKLPMIKAAIERGVYFELT---------------YSDLILD--VQL 186 (733)
Q Consensus 124 VAVrP~SEkaFr~ACenldVDIISLD~s~RLPF~LKhklaraAIeRGV~FEI~---------------YSplI~D--s~s 186 (733)
|++|....+..+.|.. ..++.|.+= +.+....++...++|+++--+ +.|.... ...
T Consensus 228 v~~H~~~~~~i~~~l~-~g~~~i~H~------~~~~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~ 300 (423)
T 3feq_A 228 VMAHAYTGRAIARAVR-CGVRTIEHG------NLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVASV 300 (423)
T ss_dssp EEEEEEEHHHHHHHHH-HTCCEEEEE------EECCHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSSTHHHH
T ss_pred EEEEeCChHHHHHHHH-cCCCEEecc------CcCCHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHHHHHHH
Confidence 5566666666666665 456666542 235567888899999998321 1122211 233
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 004730 187 RRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSKNCRALIS 251 (733)
Q Consensus 187 Rrn~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~DVINLl~LfGLseeeAK~ALS~nPrsLL~ 251 (733)
|...+..++.+++. |.++.++|.+.....-+....+..+.. +|+..+|.++.+.||..++-
T Consensus 301 ~~~~~~~~~~l~~~--Gv~v~~gTD~~~~~~~~~~~e~~~~~~--~ls~~eal~~aT~~~A~~lg 361 (423)
T 3feq_A 301 QQKGRESLEIYANA--GVKMGFGSDLLGEMHAFQSGEFRIRAE--VLGNLEALRSATTVAAEIVN 361 (423)
T ss_dssp HHHHHHHHHHHHHH--TCCBCCCCCCCGGGGGGTTHHHHHHHT--TSCHHHHHHTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHC--CCEEEECCCCCCCCCcchHHHHHHHHh--hCCHHHHHHHHHHHHHHHhC
Confidence 44455556666543 667777777642222233334433322 49999999999999977763
No 38
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=24.77 E-value=1.5e+02 Score=33.23 Aligned_cols=83 Identities=16% Similarity=0.055 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHh--hcCCCcEEEccCCCCCCCCCC---HHHHHHHHHHhCCC
Q 004730 160 LPMIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVD--WTRGKNLILSSGASSVTELRG---PYDVANLSSLLGIS 234 (733)
Q Consensus 160 hklaraAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIR--aTKGKnIIISSGA~S~lELRS---P~DVINLl~LfGLs 234 (733)
...+..++++|.++-|. +....+ +..++.+++ ...+.++.+.|....+..++. -...+..+.-.|++
T Consensus 247 ~eea~e~l~~G~~i~i~-gs~~~~-------~~~l~~~i~~~~~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~~Gls 318 (608)
T 3nqb_A 247 GEDLMAKLRAGLTIELR-GSHDHL-------LPEFVAALNTLGHLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLVRYGLK 318 (608)
T ss_dssp HHHHHHHHHTTCEEEEE-SSSGGG-------HHHHHHHHHHHTSCCTTEEEECBSCCHHHHHHTCSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEe-cccccc-------HHHHHHHHHhHhhcCceEEEecCCCCCcchhhhcchHHHHHHHHHcCCC
Confidence 36777788999999988 433322 122333444 346889999998755444332 22334444456999
Q ss_pred HHHHHHHHHHhHHHHH
Q 004730 235 MERAKAAVSKNCRALI 250 (733)
Q Consensus 235 eeeAK~ALS~nPrsLL 250 (733)
.++|.++.+.||..++
T Consensus 319 ~~eal~~aT~n~A~~l 334 (608)
T 3nqb_A 319 PEWALRAATLNAAQRL 334 (608)
T ss_dssp HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999998877
No 39
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=24.32 E-value=1.3e+02 Score=29.43 Aligned_cols=73 Identities=7% Similarity=-0.048 Sum_probs=51.4
Q ss_pred HHHHHcCeEEEEEecccccChHHHHHHHHHHHHHHhhcCCCcEEEccCCCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHH
Q 004730 164 KAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVS 243 (733)
Q Consensus 164 raAIeRGV~FEI~YSplI~Ds~sRrn~IsNar~LIRaTKGKnIIISSGA~S~lELRSP~DVINLl~LfGLseeeAK~ALS 243 (733)
...+++|++|.++-. .. -..++.+++...--+|++.|...- .+|..++....-+|++.++..+.+.
T Consensus 250 ~~~~~~n~y~~~sg~--~~--------~~~~~~~~~~~g~dril~gSD~P~----~~~~~~~~~~~~~~l~~~~~~~i~~ 315 (327)
T 2dvt_A 250 MDYFNENFHITTSGN--FR--------TQTLIDAILEIGADRILFSTDWPF----ENIDHASDWFNATSIAEADRVKIGR 315 (327)
T ss_dssp HHHHHHHEEEECTTC--CC--------HHHHHHHHTTTCGGGEECCCCTTT----SCHHHHHHHHHHSSSCHHHHHHHHT
T ss_pred HHHHhhcEEEeccCC--CC--------HHHHHHHHHHhCcccEEEecCCCC----ccHHHHHHHHHHCCCCHHHHHHHHH
Confidence 445568999888632 11 123445666555567999998863 3566777666666999999999999
Q ss_pred HhHHHHH
Q 004730 244 KNCRALI 250 (733)
Q Consensus 244 ~nPrsLL 250 (733)
.|++.++
T Consensus 316 ~Na~rl~ 322 (327)
T 2dvt_A 316 TNARRLF 322 (327)
T ss_dssp HHHHHHT
T ss_pred HhHHHHh
Confidence 9998875
No 40
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=23.80 E-value=7.2e+02 Score=26.92 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=92.1
Q ss_pred EEEEecCCHHHHHHHHhcCCCc-eEEecCCC---CCCCCCCHHHHHHHHHcCeEEEEEecccc-cChH------------
Q 004730 123 LVAVRPLNQSAFDHACEKAEVD-IISINFAE---KLPFRLKLPMIKAAIERGVYFELTYSDLI-LDVQ------------ 185 (733)
Q Consensus 123 IVAVrP~SEkaFr~ACenldVD-IISLD~s~---RLPF~LKhklaraAIeRGV~FEI~YSplI-~Ds~------------ 185 (733)
||-|-=.+++.|..+++-.+.- |.|+--.. ..|--+.-.++++..++|-.+.|++.+.+ ....
T Consensus 208 iVDlSH~s~~t~~dvl~~s~~PVIaSHSnaral~~hpRNl~De~l~~la~~GGVIgv~f~~~fl~~~~~~~~~~~~~~~~ 287 (417)
T 3b40_A 208 IIDVSQMSTKALEQVAALSRAPIVASHSAPRALVDIKRNLSDHEMQLIKDSGGVIQVVGFPAYLRPLSKPTLDKLDALRA 287 (417)
T ss_dssp EEECTTBCHHHHHHHHHHCSSCEEEEEECBTTTSCCTTSBCHHHHHHHHHTTCEEEEECCHHHHSCCCHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHhcCCCEEEeCCchhhcCCCCCCCCHHHHHHHHHcCCEEEEEechhhccccchhhhhhhhhhhh
Confidence 5666777889999999866665 44554431 12334667899999999999999976544 3210
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHhhcCCCcEEEccC---CCCCC
Q 004730 186 ----------------------------------------------LRRQMISNAKLLVDWTRGKNLILSSG---ASSVT 216 (733)
Q Consensus 186 ----------------------------------------------sRrn~IsNar~LIRaTKGKnIIISSG---A~S~l 216 (733)
.=..++.++..++.+..--.|-|+|. ...+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~ 367 (417)
T 3b40_A 288 RFDLPPLEGLDYALMPGDPIITIWPEQRFGEYASALYGILEEEPKAGLKELVDAIDYTVKKVGIDHVGISSDFNDGGGVD 367 (417)
T ss_dssp HTTCCCCCSSTTTSSCCCGGGGGSCHHHHHHHHHHHHHHHHTSCCCBHHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBB
T ss_pred hccccccccccccccccchhhcccchhhhhhhhhhhcccccCCCCCCHHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCC
Confidence 01123444444555555567888873 33456
Q ss_pred CCCCHHHHHHHHHHh---CCCHHHHHHHHHHhHHHHHHhhhh
Q 004730 217 ELRGPYDVANLSSLL---GISMERAKAAVSKNCRALISNALR 255 (733)
Q Consensus 217 ELRSP~DVINLl~Lf---GLseeeAK~ALS~nPrsLL~~AlR 255 (733)
.+.++.+.-+|..-| |.++++..+.+..|...++.....
T Consensus 368 gl~dvs~~p~l~~~L~~rG~se~di~ki~ggN~lRVl~~v~~ 409 (417)
T 3b40_A 368 GWKDVSEIRNVTAELITRGYSDADIAKLWGGNFLRAWGEVQK 409 (417)
T ss_dssp TBCSGGGHHHHHHHHHHHTCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888887644 999999999999999999887643
No 41
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=21.70 E-value=47 Score=39.57 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=25.7
Q ss_pred eeeecccCCCC---CCCCcccchhhHHHHHHHHHHcCCcEEEE
Q 004730 3 FFDLNIPYVES---PPSNATTHKNARVKIVIKAMELGYTGVAY 42 (733)
Q Consensus 3 FYDLNIpwp~~---g~st~~~~~~~rlkLL~~A~eLGYsgVAI 42 (733)
|.||.+|-..+ |..+ -.+++.+|.++||.++||
T Consensus 6 ~vdLH~HT~~S~lDG~~~-------~~elv~~A~~~Gl~alAI 41 (910)
T 2hnh_A 6 FVHLRVHSDYSMIDGLAK-------TAPLVKKAAALGMPALAI 41 (910)
T ss_dssp CCCCCBCCGGGSSSCCSC-------HHHHHHHHHHTTCSEEEE
T ss_pred eeeecccccCchhcccCC-------HHHHHHHHHHCCCCEEEE
Confidence 89999997644 2221 246889999999999999
Done!