Query 004732
Match_columns 733
No_of_seqs 636 out of 4911
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:01:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004732.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004732hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 5.3E-55 1.8E-59 453.5 20.3 256 393-664 13-288 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 1.3E-54 4.4E-59 452.6 22.2 256 394-665 27-306 (308)
3 4aoj_A High affinity nerve gro 100.0 1.7E-54 6E-59 455.9 21.7 257 393-665 41-319 (329)
4 3omv_A RAF proto-oncogene seri 100.0 5.8E-54 2E-58 445.6 22.9 258 392-663 35-298 (307)
5 4b9d_A Serine/threonine-protei 100.0 2.5E-52 8.6E-57 439.3 23.4 249 393-658 24-276 (350)
6 4fih_A Serine/threonine-protei 100.0 2.6E-52 8.8E-57 438.6 22.5 249 393-658 74-323 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-52 1.5E-56 435.6 17.4 253 392-664 57-315 (336)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.7E-52 2.6E-56 428.5 18.8 247 393-657 32-283 (311)
9 3fpq_A Serine/threonine-protei 100.0 1.8E-51 6E-56 423.9 20.1 245 396-658 29-282 (290)
10 4fie_A Serine/threonine-protei 100.0 4E-51 1.4E-55 440.0 23.5 250 392-658 150-400 (423)
11 3hyh_A Carbon catabolite-derep 100.0 1.3E-50 4.5E-55 413.6 23.4 245 393-658 13-262 (275)
12 4ase_A Vascular endothelial gr 100.0 2.1E-51 7.1E-56 435.9 16.3 258 391-663 62-345 (353)
13 3hmm_A TGF-beta receptor type- 100.0 4.7E-51 1.6E-55 426.7 18.4 262 394-664 4-296 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 9.5E-51 3.2E-55 420.4 14.9 242 393-653 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 8.2E-49 2.8E-53 407.7 19.2 248 393-658 5-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.3E-46 4.4E-51 406.1 22.5 262 393-659 54-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 8.2E-46 2.8E-50 395.7 23.5 203 385-596 13-249 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.3E-45 4.5E-50 390.8 22.2 278 386-666 32-316 (321)
19 3uim_A Brassinosteroid insensi 100.0 2.5E-45 8.5E-50 389.6 22.8 279 385-663 22-309 (326)
20 3uto_A Twitchin; kinase, muscl 100.0 3.5E-45 1.2E-49 414.3 23.9 253 392-659 156-411 (573)
21 3v5w_A G-protein coupled recep 100.0 3E-45 1E-49 411.4 21.6 250 391-658 187-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 6.3E-44 2.2E-48 375.9 19.2 262 392-667 9-284 (310)
23 3fxz_A Serine/threonine-protei 100.0 7.8E-43 2.7E-47 365.1 25.3 252 391-659 18-270 (297)
24 4hcu_A Tyrosine-protein kinase 100.0 3.4E-43 1.2E-47 362.4 21.1 255 393-664 10-265 (269)
25 3kul_A Ephrin type-A receptor 100.0 4.5E-43 1.5E-47 371.8 21.2 258 392-665 48-313 (325)
26 3p86_A Serine/threonine-protei 100.0 2.6E-43 8.9E-48 370.7 19.1 263 388-665 32-298 (309)
27 2psq_A Fibroblast growth facto 100.0 4.8E-43 1.6E-47 378.2 21.1 258 392-665 80-364 (370)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.2E-43 2.8E-47 359.3 21.9 258 391-665 6-264 (268)
29 3zgw_A Maternal embryonic leuc 100.0 5.2E-43 1.8E-47 373.3 21.0 252 390-659 7-261 (347)
30 3fe3_A MAP/microtubule affinit 100.0 1.6E-42 5.3E-47 367.5 23.8 249 391-659 13-265 (328)
31 2qol_A Ephrin receptor; recept 100.0 6.3E-43 2.2E-47 377.5 20.2 258 392-665 44-309 (373)
32 2nru_A Interleukin-1 receptor- 100.0 6E-42 2.1E-46 360.2 26.3 274 384-663 16-304 (307)
33 4eqm_A Protein kinase; transfe 100.0 2.2E-42 7.4E-47 361.2 22.6 261 392-665 10-275 (294)
34 3gen_A Tyrosine-protein kinase 100.0 1.7E-42 6E-47 359.9 21.3 257 391-664 22-279 (283)
35 2c30_A Serine/threonine-protei 100.0 5.4E-42 1.9E-46 362.8 25.0 248 395-659 47-295 (321)
36 4aw2_A Serine/threonine-protei 100.0 9.9E-43 3.4E-47 381.9 19.6 263 385-659 66-339 (437)
37 3cbl_A C-FES, proto-oncogene t 100.0 3.4E-43 1.2E-47 380.6 15.3 257 391-663 112-372 (377)
38 2izr_A Casein kinase I isoform 100.0 5.1E-42 1.8E-46 364.7 24.1 260 392-667 8-283 (330)
39 1qcf_A Haematopoetic cell kina 100.0 1.3E-42 4.4E-47 385.3 20.2 261 389-667 184-446 (454)
40 3ugc_A Tyrosine-protein kinase 100.0 4.8E-43 1.6E-47 366.4 14.9 262 392-665 9-291 (295)
41 3op5_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 371.3 21.7 270 391-669 33-333 (364)
42 3soc_A Activin receptor type-2 100.0 5E-43 1.7E-47 371.1 14.9 264 392-664 23-317 (322)
43 1tki_A Titin; serine kinase, m 100.0 3.8E-42 1.3E-46 363.8 21.1 252 392-659 4-258 (321)
44 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-42 4.2E-47 374.7 17.6 259 392-666 70-346 (367)
45 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-42 6.3E-47 387.8 19.2 259 389-664 216-477 (495)
46 1csn_A Casein kinase-1; phosph 100.0 1.5E-41 5.1E-46 355.5 24.5 261 392-667 9-285 (298)
47 2vd5_A DMPK protein; serine/th 100.0 2.6E-42 9E-47 375.9 19.4 262 385-659 53-328 (412)
48 3poz_A Epidermal growth factor 100.0 1.8E-42 6.1E-47 367.6 17.6 256 392-664 14-277 (327)
49 1kob_A Twitchin; kinase, intra 100.0 2.4E-41 8.3E-46 365.9 26.5 253 392-659 50-305 (387)
50 3niz_A Rhodanese family protei 100.0 6.1E-42 2.1E-46 360.8 21.1 262 392-658 20-300 (311)
51 1luf_A Muscle-specific tyrosin 100.0 4.8E-42 1.7E-46 366.9 20.5 263 387-665 41-335 (343)
52 1o6l_A RAC-beta serine/threoni 100.0 8.1E-42 2.8E-46 363.0 22.1 249 392-659 4-261 (337)
53 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.2E-42 1.1E-46 381.8 19.7 261 390-668 181-443 (452)
54 3v8s_A RHO-associated protein 100.0 3.4E-42 1.2E-46 374.7 18.9 259 386-659 62-330 (410)
55 1mp8_A Focal adhesion kinase 1 100.0 6.9E-42 2.3E-46 355.1 20.3 257 391-664 13-275 (281)
56 3t9t_A Tyrosine-protein kinase 100.0 6E-42 2E-46 352.5 19.6 255 393-664 8-263 (267)
57 2yab_A Death-associated protei 100.0 1.5E-41 5.1E-46 364.3 23.2 252 392-659 11-273 (361)
58 3lb7_A RAF proto-oncogene seri 100.0 1.2E-41 4.1E-46 357.8 21.9 262 391-666 34-301 (307)
59 3txo_A PKC-L, NPKC-ETA, protei 100.0 7E-42 2.4E-46 365.9 20.1 249 391-658 21-280 (353)
60 3vhe_A Vascular endothelial gr 100.0 3.2E-42 1.1E-46 370.7 17.6 262 388-664 17-354 (359)
61 3tt0_A Basic fibroblast growth 100.0 8.1E-42 2.8E-46 370.6 20.4 262 390-667 66-354 (382)
62 3dtc_A Mitogen-activated prote 100.0 8.9E-42 3E-46 352.1 19.5 253 392-662 6-270 (271)
63 1ob3_A PFPK5, cell division co 100.0 1.2E-41 4.2E-46 354.5 20.6 262 393-659 2-281 (288)
64 2y0a_A Death-associated protei 100.0 2.4E-41 8.4E-46 358.6 23.2 252 392-659 10-272 (326)
65 2x4f_A Myosin light chain kina 100.0 1.9E-41 6.6E-46 365.7 22.4 248 397-659 93-343 (373)
66 4euu_A Serine/threonine-protei 100.0 8.2E-41 2.8E-45 353.7 26.5 265 392-661 8-305 (319)
67 3kfa_A Tyrosine-protein kinase 100.0 8.5E-42 2.9E-46 355.6 18.4 261 387-664 7-270 (288)
68 3q4u_A Activin receptor type-1 100.0 1.9E-41 6.4E-46 355.3 20.5 259 391-662 6-299 (301)
69 3lxl_A Tyrosine-protein kinase 100.0 2.8E-42 9.6E-47 366.2 14.4 270 393-665 23-303 (327)
70 2bdw_A Hypothetical protein K1 100.0 2.5E-41 8.6E-46 363.4 21.9 252 392-659 28-285 (362)
71 3kex_A Receptor tyrosine-prote 100.0 1.4E-41 4.7E-46 360.6 19.3 256 392-664 12-275 (325)
72 3soa_A Calcium/calmodulin-depe 100.0 3.3E-41 1.1E-45 371.2 23.0 254 391-659 9-268 (444)
73 1fot_A TPK1 delta, CAMP-depend 100.0 5.5E-41 1.9E-45 354.0 23.7 245 392-658 5-258 (318)
74 1xjd_A Protein kinase C, theta 100.0 1.6E-41 5.5E-46 361.7 19.7 250 389-657 13-268 (345)
75 3o0g_A Cell division protein k 100.0 7.9E-41 2.7E-45 349.1 24.5 262 393-659 2-283 (292)
76 3qup_A Tyrosine-protein kinase 100.0 1E-41 3.5E-46 361.2 18.1 264 388-667 18-300 (323)
77 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-41 5.1E-46 376.2 20.0 252 390-664 190-444 (450)
78 2pmi_A Negative RE, cyclin-dep 100.0 7.6E-41 2.6E-45 353.5 24.3 262 392-658 4-293 (317)
79 3tki_A Serine/threonine-protei 100.0 9.4E-42 3.2E-46 361.2 17.3 251 392-659 6-262 (323)
80 2ivs_A Proto-oncogene tyrosine 100.0 1E-41 3.4E-46 359.6 17.4 258 391-664 21-310 (314)
81 1qpc_A LCK kinase; alpha beta 100.0 2.1E-41 7.2E-46 350.9 19.2 258 390-665 10-269 (279)
82 3c0i_A Peripheral plasma membr 100.0 5.9E-41 2E-45 359.4 22.9 251 393-658 24-286 (351)
83 2v62_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 358.1 23.5 263 392-665 36-328 (345)
84 1rjb_A FL cytokine receptor; k 100.0 1.2E-41 4.2E-46 363.9 17.4 262 389-665 41-334 (344)
85 3cc6_A Protein tyrosine kinase 100.0 3.4E-41 1.2E-45 349.8 20.1 257 391-664 10-272 (281)
86 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-41 4.2E-46 384.7 18.2 261 390-668 264-526 (535)
87 4e5w_A Tyrosine-protein kinase 100.0 4.8E-42 1.6E-46 360.0 13.8 258 393-663 21-300 (302)
88 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.4E-41 2.2E-45 358.2 22.5 245 392-658 40-293 (350)
89 4fr4_A YANK1, serine/threonine 100.0 4E-41 1.4E-45 363.1 21.0 250 392-658 14-271 (384)
90 4f0f_A Serine/threonine-protei 100.0 2.9E-41 9.9E-46 351.4 19.1 255 391-662 17-286 (287)
91 3p1a_A MYT1 kinase, membrane-a 100.0 2.7E-41 9.3E-46 355.9 18.7 245 393-659 57-305 (311)
92 3og7_A AKAP9-BRAF fusion prote 100.0 3.4E-41 1.2E-45 351.3 19.2 260 391-664 22-287 (289)
93 1mqb_A Ephrin type-A receptor 100.0 4.8E-41 1.6E-45 357.5 20.7 259 392-666 43-310 (333)
94 3lxp_A Non-receptor tyrosine-p 100.0 9E-42 3.1E-46 360.8 14.8 266 395-665 33-310 (318)
95 1t46_A HOMO sapiens V-KIT hard 100.0 1.7E-41 5.9E-46 357.7 16.8 260 390-664 20-306 (313)
96 4fvq_A Tyrosine-protein kinase 100.0 4.9E-41 1.7E-45 350.0 20.0 251 392-665 7-275 (289)
97 1u5q_A Serine/threonine protei 100.0 4E-41 1.4E-45 359.8 19.6 246 393-659 54-306 (348)
98 2i0e_A Protein kinase C-beta I 100.0 6.6E-41 2.3E-45 358.2 21.2 249 391-658 18-276 (353)
99 3lzb_A Epidermal growth factor 100.0 3E-41 1E-45 358.1 18.2 257 392-665 14-278 (327)
100 4dc2_A Protein kinase C IOTA t 100.0 7.4E-41 2.5E-45 362.2 21.5 247 392-653 51-307 (396)
101 2w4o_A Calcium/calmodulin-depe 100.0 5.5E-41 1.9E-45 359.2 20.3 253 390-659 50-306 (349)
102 1p4o_A Insulin-like growth fac 100.0 4.8E-41 1.6E-45 355.9 19.2 262 388-665 20-299 (322)
103 1u59_A Tyrosine-protein kinase 100.0 6.7E-41 2.3E-45 348.7 19.8 255 393-664 9-271 (287)
104 3g33_A Cell division protein k 100.0 1.3E-40 4.3E-45 350.4 21.9 263 391-659 7-297 (308)
105 2pvf_A Fibroblast growth facto 100.0 8.5E-41 2.9E-45 355.9 20.8 259 391-665 33-318 (334)
106 3dbq_A Dual specificity protei 100.0 3.8E-41 1.3E-45 359.9 18.0 252 391-659 7-274 (343)
107 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.4E-41 8E-46 359.1 15.9 247 392-659 8-259 (336)
108 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.5E-45 353.1 21.6 249 392-659 16-277 (327)
109 2zv2_A Calcium/calmodulin-depe 100.0 5.1E-41 1.7E-45 351.6 18.2 249 392-658 12-292 (298)
110 2ozo_A Tyrosine-protein kinase 100.0 6.4E-41 2.2E-45 384.2 20.6 254 394-664 336-597 (613)
111 3uc3_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 354.3 25.3 252 392-659 19-275 (361)
112 3a8x_A Protein kinase C IOTA t 100.0 1.8E-40 6.2E-45 354.2 22.5 247 392-653 8-264 (345)
113 3qd2_B Eukaryotic translation 100.0 5.9E-41 2E-45 356.5 18.6 250 392-659 5-326 (332)
114 3kk8_A Calcium/calmodulin depe 100.0 2.9E-40 9.9E-45 343.2 23.3 251 392-658 5-261 (284)
115 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-40 8.5E-45 345.9 22.9 261 392-667 8-282 (296)
116 3f3z_A Calcium/calmodulin-depe 100.0 2E-40 6.7E-45 343.2 21.8 250 392-658 8-261 (277)
117 3sv0_A Casein kinase I-like; t 100.0 3.5E-40 1.2E-44 366.0 25.1 261 392-667 6-280 (483)
118 3is5_A Calcium-dependent prote 100.0 4.6E-40 1.6E-44 342.0 24.2 249 393-658 22-278 (285)
119 2eue_A Carbon catabolite derep 100.0 2.4E-40 8.3E-45 342.2 21.8 245 393-658 13-262 (275)
120 3kmu_A ILK, integrin-linked ki 100.0 6.7E-41 2.3E-45 345.3 17.5 253 392-664 9-269 (271)
121 2h34_A Serine/threonine-protei 100.0 2.6E-40 8.9E-45 348.1 22.3 261 392-667 33-298 (309)
122 4hgt_A Casein kinase I isoform 100.0 2.3E-40 7.9E-45 346.0 21.7 262 391-667 7-282 (296)
123 3c1x_A Hepatocyte growth facto 100.0 4E-41 1.4E-45 363.1 16.4 257 394-666 90-356 (373)
124 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-40 6.5E-45 348.8 21.0 254 393-667 8-265 (307)
125 3ork_A Serine/threonine protei 100.0 4E-41 1.4E-45 354.7 15.7 253 392-658 11-273 (311)
126 3fdn_A Serine/threonine-protei 100.0 2.6E-40 9E-45 342.7 21.5 248 391-659 7-258 (279)
127 2r5t_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 359.1 19.3 247 392-657 37-288 (373)
128 4ejn_A RAC-alpha serine/threon 100.0 9.2E-41 3.1E-45 369.9 19.3 250 391-659 146-405 (446)
129 3gni_B Strad alpha; kinase fol 100.0 2.5E-40 8.6E-45 360.0 22.3 262 391-659 23-334 (389)
130 2jii_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 357.7 19.1 262 392-668 41-339 (352)
131 3oz6_A Mitogen-activated prote 100.0 2.6E-40 8.7E-45 359.7 22.2 263 391-659 7-329 (388)
132 4agu_A Cyclin-dependent kinase 100.0 2.8E-40 9.5E-45 348.2 21.8 262 393-659 3-285 (311)
133 2zmd_A Dual specificity protei 100.0 1.2E-40 4.2E-45 361.8 19.5 250 392-659 55-321 (390)
134 3pls_A Macrophage-stimulating 100.0 1E-40 3.5E-45 349.1 17.8 257 394-666 22-288 (298)
135 4eut_A Serine/threonine-protei 100.0 1.3E-40 4.3E-45 362.9 19.1 269 392-665 8-309 (396)
136 3brb_A Proto-oncogene tyrosine 100.0 1.6E-40 5.4E-45 350.5 19.2 262 388-665 29-308 (313)
137 3cok_A Serine/threonine-protei 100.0 2.3E-40 8E-45 342.9 19.9 249 392-658 10-262 (278)
138 2i1m_A Macrophage colony-stimu 100.0 7.7E-41 2.6E-45 356.1 16.7 260 389-663 42-324 (333)
139 3hko_A Calcium/calmodulin-depe 100.0 1.5E-40 5E-45 355.7 18.7 259 388-659 21-331 (345)
140 2wqm_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 346.2 22.4 259 393-665 32-297 (310)
141 2a2a_A Death-associated protei 100.0 4E-40 1.4E-44 348.7 21.7 252 392-659 11-273 (321)
142 3f66_A Hepatocyte growth facto 100.0 1.7E-40 5.8E-45 347.6 18.6 258 392-665 24-291 (298)
143 2y94_A 5'-AMP-activated protei 100.0 4.2E-40 1.4E-44 364.7 22.7 247 392-658 15-266 (476)
144 2yfx_A Tyrosine-protein kinase 100.0 1.6E-40 5.3E-45 352.8 18.3 260 391-666 28-305 (327)
145 1fvr_A Tyrosine-protein kinase 100.0 4.7E-40 1.6E-44 349.1 21.9 255 393-665 25-300 (327)
146 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-40 7.5E-45 351.5 19.3 266 392-664 40-321 (326)
147 1ua2_A CAK, cell division prot 100.0 3.5E-40 1.2E-44 352.9 20.9 266 389-659 6-292 (346)
148 3llt_A Serine/threonine kinase 100.0 1.9E-39 6.5E-44 349.2 26.7 260 390-658 32-355 (360)
149 2acx_A G protein-coupled recep 100.0 1.8E-40 6E-45 372.5 19.1 253 390-658 181-444 (576)
150 2ac3_A MAP kinase-interacting 100.0 8.8E-40 3E-44 345.2 23.5 256 393-659 12-296 (316)
151 2buj_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 350.1 18.5 258 392-664 28-305 (317)
152 2xir_A Vascular endothelial gr 100.0 1.5E-40 5.2E-45 350.9 17.3 261 389-664 23-309 (316)
153 3mtl_A Cell division protein k 100.0 2E-40 6.8E-45 351.4 18.2 261 393-658 2-281 (324)
154 3mdy_A Bone morphogenetic prot 100.0 7.2E-40 2.5E-44 349.0 22.6 265 390-665 34-331 (337)
155 3gxj_A TGF-beta receptor type- 100.0 1.1E-41 3.9E-46 357.2 8.5 259 393-665 3-297 (303)
156 1xbb_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 345.2 18.4 255 392-664 15-278 (291)
157 3ttj_A Mitogen-activated prote 100.0 6.3E-40 2.1E-44 363.8 22.8 259 392-659 61-356 (464)
158 2vwi_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 347.2 18.1 261 390-659 12-288 (303)
159 3dls_A PAS domain-containing s 100.0 4.1E-40 1.4E-44 350.3 20.1 243 391-659 22-275 (335)
160 4aaa_A Cyclin-dependent kinase 100.0 3.7E-40 1.3E-44 350.5 19.4 262 393-659 25-307 (331)
161 3mi9_A Cell division protein k 100.0 9.9E-40 3.4E-44 350.2 22.8 263 393-659 17-312 (351)
162 3kn6_A Ribosomal protein S6 ki 100.0 2.2E-40 7.5E-45 351.0 17.5 247 398-659 16-271 (325)
163 2clq_A Mitogen-activated prote 100.0 2.1E-39 7.1E-44 338.7 24.4 252 393-659 22-279 (295)
164 1byg_A CSK, protein (C-termina 100.0 4.2E-40 1.4E-44 341.0 18.7 250 392-664 20-272 (278)
165 1vzo_A Ribosomal protein S6 ki 100.0 2.5E-40 8.6E-45 355.1 17.6 254 392-660 53-323 (355)
166 4fl3_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 378.9 19.9 247 399-663 375-629 (635)
167 2j7t_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 344.0 19.8 254 391-659 17-276 (302)
168 1u46_A ACK-1, activated CDC42 100.0 2.6E-40 8.8E-45 344.8 16.9 256 392-663 17-282 (291)
169 3bhy_A Death-associated protei 100.0 1E-39 3.5E-44 338.9 21.3 250 393-658 5-265 (283)
170 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.7E-40 2.3E-44 353.4 20.6 254 388-665 60-339 (365)
171 2qr7_A Ribosomal protein S6 ki 100.0 4.1E-40 1.4E-44 351.0 18.6 251 392-658 21-277 (342)
172 2w5a_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 338.3 21.0 257 392-662 5-271 (279)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.4E-40 1.9E-44 348.8 19.4 261 392-658 33-318 (329)
174 2y7j_A Phosphorylase B kinase 100.0 1.7E-39 5.9E-44 349.8 23.6 256 388-659 89-360 (365)
175 3eqc_A Dual specificity mitoge 100.0 5.8E-40 2E-44 353.3 19.5 261 392-659 32-325 (360)
176 3g2f_A Bone morphogenetic prot 100.0 7E-40 2.4E-44 349.1 19.8 267 392-667 12-320 (336)
177 3pg1_A Mitogen-activated prote 100.0 4.2E-40 1.4E-44 354.6 18.2 269 385-659 14-317 (362)
178 2rku_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 339.1 22.3 249 392-659 14-266 (294)
179 2a19_B Interferon-induced, dou 100.0 9.9E-40 3.4E-44 339.0 20.2 247 392-665 10-274 (284)
180 3c4z_A Rhodopsin kinase; Ser/T 100.0 1E-39 3.5E-44 365.7 21.7 249 391-654 183-439 (543)
181 3com_A Serine/threonine-protei 100.0 2.7E-39 9.1E-44 341.2 23.7 251 391-658 27-278 (314)
182 3a7i_A MST3 kinase, serine/thr 100.0 3.5E-39 1.2E-43 338.5 24.3 249 392-659 21-271 (303)
183 1cm8_A Phosphorylated MAP kina 100.0 1.4E-39 4.8E-44 350.6 21.9 262 392-663 24-314 (367)
184 1nxk_A MAP kinase-activated pr 100.0 8.3E-40 2.8E-44 356.4 20.1 251 393-659 61-322 (400)
185 2owb_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 345.9 22.0 248 392-658 40-291 (335)
186 2jam_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 342.5 20.2 251 392-659 8-262 (304)
187 2vgo_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 337.2 21.7 246 392-658 13-262 (284)
188 3eb0_A Putative uncharacterize 100.0 1.2E-39 4.1E-44 353.7 21.0 260 389-658 3-321 (383)
189 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-39 1.2E-43 335.5 23.1 244 392-659 10-280 (289)
190 1b6c_B TGF-B superfamily recep 100.0 1.4E-39 4.7E-44 347.7 19.9 262 390-665 39-336 (342)
191 3lij_A Calcium/calmodulin depe 100.0 2.7E-39 9.1E-44 362.8 23.0 250 392-658 36-291 (494)
192 3ll6_A Cyclin G-associated kin 100.0 3.6E-40 1.2E-44 351.2 15.0 260 391-668 26-311 (337)
193 3lm5_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 346.8 18.0 256 389-659 24-288 (327)
194 2j0j_A Focal adhesion kinase 1 100.0 1.3E-39 4.6E-44 375.5 20.9 258 390-664 387-650 (656)
195 3mwu_A Calmodulin-domain prote 100.0 2.1E-39 7.1E-44 363.1 21.8 251 392-659 21-277 (486)
196 3i6u_A CDS1, serine/threonine- 100.0 5E-40 1.7E-44 360.5 16.0 253 390-659 132-400 (419)
197 3byv_A Rhoptry kinase; malaria 100.0 3.7E-40 1.3E-44 357.0 14.7 241 391-658 71-359 (377)
198 3q5i_A Protein kinase; CDPK, m 100.0 4.7E-39 1.6E-43 361.7 24.1 252 391-659 34-302 (504)
199 2r3i_A Cell division protein k 100.0 5E-39 1.7E-43 336.6 22.7 261 393-658 3-283 (299)
200 3fme_A Dual specificity mitoge 100.0 4.9E-40 1.7E-44 342.6 14.9 250 391-658 5-266 (290)
201 3rp9_A Mitogen-activated prote 100.0 5.4E-39 1.8E-43 357.1 24.0 194 392-590 52-280 (458)
202 3pfq_A PKC-B, PKC-beta, protei 100.0 2.7E-39 9.2E-44 374.1 22.3 250 390-658 338-597 (674)
203 2yex_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 338.4 16.0 251 392-659 6-262 (276)
204 3nyv_A Calmodulin-domain prote 100.0 1.4E-39 4.8E-44 364.4 19.2 251 392-659 25-282 (484)
205 3nsz_A CK II alpha, casein kin 100.0 3.9E-39 1.3E-43 342.4 21.3 256 392-659 35-320 (330)
206 1phk_A Phosphorylase kinase; g 100.0 7.5E-39 2.6E-43 335.0 22.4 252 391-658 15-283 (298)
207 3kvw_A DYRK2, dual specificity 100.0 1.2E-38 4.1E-43 350.5 25.0 202 392-602 96-307 (429)
208 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.9E-40 3E-44 345.6 15.5 260 389-666 29-303 (319)
209 3an0_A Dual specificity mitoge 100.0 6.1E-40 2.1E-44 350.2 14.1 252 389-658 47-310 (340)
210 2h6d_A 5'-AMP-activated protei 100.0 4.2E-39 1.4E-43 333.0 19.9 248 392-659 10-262 (276)
211 1t4h_A Serine/threonine-protei 100.0 7.8E-39 2.7E-43 333.6 21.8 250 393-659 26-283 (290)
212 3q60_A ROP5B; pseudokinase, tr 100.0 6.5E-40 2.2E-44 354.3 13.7 254 392-658 61-352 (371)
213 3n9x_A Phosphotransferase; mal 100.0 7.1E-39 2.4E-43 353.0 22.1 198 392-594 25-252 (432)
214 1zy4_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 336.6 20.1 251 392-659 5-284 (303)
215 3qyz_A Mitogen-activated prote 100.0 4.9E-39 1.7E-43 346.5 20.3 262 392-659 26-314 (364)
216 2xrw_A Mitogen-activated prote 100.0 7.4E-39 2.5E-43 345.9 21.7 257 392-659 24-319 (371)
217 2fst_X Mitogen-activated prote 100.0 5E-39 1.7E-43 346.0 20.2 258 392-659 28-312 (367)
218 2x7f_A TRAF2 and NCK-interacti 100.0 3.3E-39 1.1E-43 342.3 18.5 256 387-659 18-287 (326)
219 1wak_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 349.5 21.3 258 392-658 36-391 (397)
220 2ycf_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 341.6 18.4 251 392-659 9-275 (322)
221 1blx_A Cyclin-dependent kinase 100.0 8.2E-39 2.8E-43 339.3 20.9 263 390-658 8-296 (326)
222 1j1b_A Glycogen synthase kinas 100.0 5.3E-39 1.8E-43 352.5 20.1 256 393-658 54-336 (420)
223 4e7w_A Glycogen synthase kinas 100.0 2.9E-39 1E-43 351.6 17.5 258 393-659 40-322 (394)
224 2wtk_C Serine/threonine-protei 100.0 1.9E-38 6.4E-43 333.1 22.8 250 392-659 4-264 (305)
225 3e3p_A Protein kinase, putativ 100.0 1.4E-38 4.9E-43 342.3 21.2 266 387-659 17-315 (360)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 3.4E-38 1.2E-42 338.4 23.9 262 392-659 10-306 (353)
227 2i6l_A Mitogen-activated prote 100.0 1.5E-38 5.1E-43 336.1 20.7 261 392-658 10-305 (320)
228 2vx3_A Dual specificity tyrosi 100.0 7.2E-38 2.5E-42 339.6 26.0 262 390-658 51-372 (382)
229 1z57_A Dual specificity protei 100.0 4.8E-38 1.7E-42 334.9 23.8 259 392-659 13-329 (339)
230 3rgf_A Cyclin-dependent kinase 100.0 2.9E-39 9.8E-44 353.5 14.6 199 393-597 20-239 (405)
231 3cek_A Dual specificity protei 100.0 6.3E-39 2.2E-43 338.2 16.5 255 388-659 23-293 (313)
232 2pml_X PFPK7, Ser/Thr protein 100.0 3.7E-39 1.3E-43 345.2 15.0 256 392-659 30-323 (348)
233 2wei_A Calmodulin-domain prote 100.0 2.2E-38 7.6E-43 329.6 20.2 251 391-658 20-276 (287)
234 4exu_A Mitogen-activated prote 100.0 4E-38 1.4E-42 340.2 21.1 257 392-659 41-324 (371)
235 2eu9_A Dual specificity protei 100.0 1.3E-37 4.5E-42 333.9 23.1 258 392-658 18-333 (355)
236 1q8y_A SR protein kinase; tran 100.0 2.7E-38 9.2E-43 341.9 17.5 260 391-659 17-334 (373)
237 3aln_A Dual specificity mitoge 100.0 3.5E-38 1.2E-42 334.6 18.0 253 392-658 21-285 (327)
238 2dyl_A Dual specificity mitoge 100.0 8E-38 2.8E-42 330.3 20.6 250 392-658 24-283 (318)
239 3coi_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 337.4 18.8 256 393-659 24-306 (353)
240 2rio_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 343.5 21.3 251 393-659 15-296 (434)
241 3fhr_A MAP kinase-activated pr 100.0 4.5E-38 1.5E-42 334.9 17.0 252 392-659 27-288 (336)
242 2iwi_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 332.0 15.2 244 389-659 27-284 (312)
243 3a99_A Proto-oncogene serine/t 100.0 2.2E-38 7.6E-43 335.1 13.4 243 390-659 40-294 (320)
244 3p23_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 342.2 18.9 250 391-658 22-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 1E-37 3.5E-42 353.3 11.7 257 393-656 14-295 (676)
246 3dzo_A Rhoptry kinase domain; 100.0 1.5E-36 5.3E-41 332.1 15.9 242 390-658 75-363 (413)
247 2pzi_A Probable serine/threoni 100.0 1.9E-36 6.6E-41 352.5 16.6 237 392-661 79-324 (681)
248 3uqc_A Probable conserved tran 100.0 1.1E-35 3.7E-40 308.9 19.2 229 393-665 31-265 (286)
249 3m2w_A MAP kinase-activated pr 100.0 2.7E-35 9.4E-40 308.2 20.4 226 393-659 17-257 (299)
250 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-35 4.6E-40 312.4 16.7 261 13-275 38-312 (313)
251 2vuw_A Serine/threonine-protei 100.0 4.5E-36 1.6E-40 319.6 5.1 242 392-657 19-329 (336)
252 3rgz_A Protein brassinosteroid 100.0 1.1E-33 3.9E-38 334.0 22.4 258 16-273 393-723 (768)
253 3rgz_A Protein brassinosteroid 100.0 3.8E-33 1.3E-37 329.5 20.8 266 10-275 411-748 (768)
254 1ogq_A PGIP-2, polygalacturona 100.0 6.7E-32 2.3E-36 284.1 16.3 251 41-293 50-306 (313)
255 3v47_A TOLL-like receptor 5B a 100.0 8.5E-31 2.9E-35 291.0 22.3 144 17-160 30-177 (455)
256 2id5_A Lingo-1, leucine rich r 100.0 6E-31 2.1E-35 294.0 20.4 279 19-297 34-339 (477)
257 3v47_A TOLL-like receptor 5B a 100.0 1.1E-30 3.8E-35 290.1 17.2 282 12-293 49-410 (455)
258 4eco_A Uncharacterized protein 100.0 1.4E-30 4.7E-35 300.8 14.5 259 8-271 64-450 (636)
259 3t6q_A CD180 antigen; protein- 100.0 3.5E-29 1.2E-33 288.4 22.4 281 13-295 274-564 (606)
260 2id5_A Lingo-1, leucine rich r 100.0 2.2E-29 7.7E-34 281.3 19.6 258 13-270 52-336 (477)
261 4ecn_A Leucine-rich repeat pro 100.0 6.3E-30 2.2E-34 300.7 15.7 252 14-270 315-689 (876)
262 1xku_A Decorin; proteoglycan, 100.0 9.9E-29 3.4E-33 262.2 23.5 258 11-277 25-286 (330)
263 3oja_A Leucine-rich immune mol 100.0 1.2E-31 4.1E-36 299.3 -0.9 214 19-245 36-250 (487)
264 4fcg_A Uncharacterized protein 100.0 4.4E-29 1.5E-33 264.2 18.2 223 41-267 81-314 (328)
265 4eco_A Uncharacterized protein 100.0 1.8E-29 6.2E-34 291.4 15.4 253 11-268 200-502 (636)
266 2ft3_A Biglycan; proteoglycan, 100.0 2E-28 6.7E-33 260.1 21.4 254 13-276 29-286 (332)
267 2z66_A Variable lymphocyte rec 100.0 8.4E-29 2.9E-33 259.8 18.3 245 21-269 11-263 (306)
268 4fcg_A Uncharacterized protein 100.0 1.5E-28 5E-33 260.2 19.7 223 18-245 82-314 (328)
269 4azs_A Methyltransferase WBDD; 100.0 4.5E-30 1.6E-34 290.6 8.6 186 400-594 241-438 (569)
270 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-28 6.2E-33 254.5 17.7 250 20-272 14-266 (285)
271 3zyi_A Leucine-rich repeat-con 100.0 4.5E-28 1.5E-32 268.6 22.0 248 20-271 57-307 (452)
272 1xku_A Decorin; proteoglycan, 100.0 9.6E-28 3.3E-32 254.6 23.5 245 17-268 52-307 (330)
273 3t6q_A CD180 antigen; protein- 100.0 2.5E-28 8.6E-33 281.3 20.5 258 12-270 296-563 (606)
274 2z66_A Variable lymphocyte rec 100.0 2.6E-28 9.1E-33 256.0 17.5 252 17-269 28-289 (306)
275 3zyj_A Leucine-rich repeat-con 100.0 8.2E-28 2.8E-32 265.6 22.0 247 20-270 46-295 (440)
276 2ft3_A Biglycan; proteoglycan, 100.0 1E-27 3.5E-32 254.6 21.7 242 18-267 55-307 (332)
277 3vq2_A TLR4, TOLL-like recepto 100.0 4.8E-28 1.6E-32 278.9 20.2 122 154-275 392-518 (606)
278 3o6n_A APL1; leucine-rich repe 100.0 1E-27 3.5E-32 260.5 21.7 249 18-270 46-334 (390)
279 3oja_B Anopheles plasmodium-re 100.0 7.4E-28 2.5E-32 276.2 21.3 248 19-270 53-340 (597)
280 2z7x_B TOLL-like receptor 1, v 100.0 5.6E-28 1.9E-32 273.0 19.8 248 18-268 22-435 (520)
281 3o6n_A APL1; leucine-rich repe 100.0 6.9E-28 2.4E-32 261.9 17.1 252 13-269 65-354 (390)
282 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.6E-27 9E-32 270.0 22.6 107 17-126 52-159 (562)
283 3zyi_A Leucine-rich repeat-con 100.0 1.9E-27 6.6E-32 263.5 20.8 231 18-250 76-308 (452)
284 3j0a_A TOLL-like receptor 5; m 100.0 2E-27 6.8E-32 283.5 22.4 263 17-279 24-363 (844)
285 3zyj_A Leucine-rich repeat-con 100.0 2.2E-27 7.5E-32 262.1 21.1 231 18-250 65-297 (440)
286 3oja_B Anopheles plasmodium-re 100.0 5E-28 1.7E-32 277.7 16.4 252 13-269 71-360 (597)
287 2z7x_B TOLL-like receptor 1, v 99.9 1.4E-27 4.6E-32 269.9 19.0 245 20-270 3-415 (520)
288 1wwl_A Monocyte differentiatio 99.9 1.3E-28 4.5E-33 259.0 9.6 245 16-269 42-311 (312)
289 4g8a_A TOLL-like receptor 4; l 99.9 3.5E-27 1.2E-31 272.9 22.5 282 18-299 53-588 (635)
290 1ziw_A TOLL-like receptor 3; i 99.9 6.5E-27 2.2E-31 273.2 24.0 283 13-295 325-626 (680)
291 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 4.4E-27 1.5E-31 268.2 21.3 245 20-270 34-444 (562)
292 4ecn_A Leucine-rich repeat pro 99.9 3.1E-27 1E-31 277.9 20.1 247 15-269 489-768 (876)
293 3j0a_A TOLL-like receptor 5; m 99.9 6E-27 2.1E-31 279.4 22.9 259 20-282 7-342 (844)
294 2z80_A TOLL-like receptor 2, v 99.9 9.4E-28 3.2E-32 257.1 12.0 243 22-268 36-315 (353)
295 2z63_A TOLL-like receptor 4, v 99.9 5.8E-27 2E-31 267.7 18.8 114 13-126 48-162 (570)
296 2z81_A CD282 antigen, TOLL-lik 99.9 8.5E-27 2.9E-31 265.1 18.7 120 14-133 47-168 (549)
297 1ozn_A Reticulon 4 receptor; N 99.9 2.6E-26 8.9E-31 238.2 20.7 224 43-269 13-240 (285)
298 1ziw_A TOLL-like receptor 3; i 99.9 1.5E-26 5.1E-31 270.1 20.8 247 17-263 25-305 (680)
299 3vq2_A TLR4, TOLL-like recepto 99.9 9.4E-27 3.2E-31 268.1 17.6 275 13-296 281-563 (606)
300 2z80_A TOLL-like receptor 2, v 99.9 1.3E-26 4.4E-31 248.3 16.4 256 36-294 26-317 (353)
301 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-27 4.3E-32 252.0 7.9 236 16-264 33-272 (317)
302 2z62_A TOLL-like receptor 4, v 99.9 5.9E-26 2E-30 234.3 19.4 224 22-249 12-241 (276)
303 4g8a_A TOLL-like receptor 4; l 99.9 7.3E-26 2.5E-30 261.8 20.8 260 11-270 70-583 (635)
304 1wwl_A Monocyte differentiatio 99.9 4E-27 1.4E-31 247.6 8.8 222 19-246 65-310 (312)
305 2z81_A CD282 antigen, TOLL-lik 99.9 1E-26 3.6E-31 264.4 12.7 153 18-170 27-181 (549)
306 2z63_A TOLL-like receptor 4, v 99.9 1.1E-25 3.8E-30 257.1 19.8 250 18-270 29-341 (570)
307 3en9_A Glycoprotease, O-sialog 99.9 7.2E-27 2.4E-31 263.0 9.0 184 396-594 339-538 (540)
308 2z62_A TOLL-like receptor 4, v 99.9 2.1E-25 7.2E-30 230.2 16.8 208 18-225 29-241 (276)
309 3o53_A Protein LRIM1, AGAP0063 99.9 6.1E-26 2.1E-30 239.1 11.9 237 18-268 11-251 (317)
310 4fmz_A Internalin; leucine ric 99.9 4.7E-25 1.6E-29 235.5 18.0 243 13-271 84-328 (347)
311 2o6q_A Variable lymphocyte rec 99.9 2.7E-24 9.3E-29 221.0 22.1 214 10-249 4-222 (270)
312 3oja_A Leucine-rich immune mol 99.9 8E-26 2.7E-30 252.2 11.4 232 24-269 17-252 (487)
313 4fmz_A Internalin; leucine ric 99.9 2.4E-24 8.2E-29 230.0 22.1 254 13-283 62-316 (347)
314 1p9a_G Platelet glycoprotein I 99.9 2.7E-24 9.1E-29 223.3 20.5 205 37-248 6-211 (290)
315 2o6q_A Variable lymphocyte rec 99.9 3.5E-24 1.2E-28 220.3 20.6 183 18-223 38-220 (270)
316 1o6v_A Internalin A; bacterial 99.9 2.6E-24 9E-29 239.3 21.1 240 14-270 65-325 (466)
317 3bz5_A Internalin-J, INLJ; leu 99.9 4.4E-24 1.5E-28 236.0 22.4 231 12-267 37-267 (457)
318 1o6v_A Internalin A; bacterial 99.9 4.5E-24 1.6E-28 237.4 20.9 241 13-269 86-346 (466)
319 3rfs_A Internalin B, repeat mo 99.9 1E-24 3.5E-29 224.4 14.5 221 20-274 22-242 (272)
320 3bz5_A Internalin-J, INLJ; leu 99.9 5.3E-24 1.8E-28 235.4 20.8 234 13-268 60-300 (457)
321 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4.1E-29 223.9 14.2 203 40-271 18-222 (272)
322 2xwt_C Thyrotropin receptor; s 99.9 4.1E-24 1.4E-28 215.5 17.1 213 21-242 15-236 (239)
323 1p9a_G Platelet glycoprotein I 99.9 1.9E-23 6.6E-28 216.8 19.6 205 11-222 4-209 (290)
324 3m19_A Variable lymphocyte rec 99.9 2.1E-23 7.1E-28 212.0 19.2 215 13-277 7-231 (251)
325 1jl5_A Outer protein YOPM; leu 99.9 2.5E-23 8.4E-28 229.8 15.5 228 17-269 11-252 (454)
326 4glp_A Monocyte differentiatio 99.9 2.8E-23 9.4E-28 218.1 15.1 226 41-269 64-309 (310)
327 2ast_B S-phase kinase-associat 99.9 1E-24 3.6E-29 231.7 2.4 263 9-276 35-315 (336)
328 3goz_A Leucine-rich repeat-con 99.9 9.9E-25 3.4E-29 234.4 2.0 248 22-269 3-299 (362)
329 4glp_A Monocyte differentiatio 99.9 2.7E-23 9.1E-28 218.2 12.6 221 20-246 67-308 (310)
330 2xwt_C Thyrotropin receptor; s 99.9 7E-23 2.4E-27 206.5 15.1 211 46-264 16-236 (239)
331 3m19_A Variable lymphocyte rec 99.9 2.1E-22 7E-27 204.6 18.2 154 17-170 35-188 (251)
332 1zar_A RIO2 kinase; serine kin 99.9 1.6E-23 5.6E-28 216.0 9.9 151 388-568 85-253 (282)
333 2ca6_A RAN GTPase-activating p 99.9 1.3E-24 4.4E-29 235.7 1.0 249 22-270 9-319 (386)
334 1jl5_A Outer protein YOPM; leu 99.9 7.4E-22 2.5E-26 218.0 22.8 206 41-269 131-352 (454)
335 1h6u_A Internalin H; cell adhe 99.9 1.4E-22 4.7E-27 212.4 14.8 208 21-246 23-231 (308)
336 3g06_A SSPH2 (leucine-rich rep 99.9 9.3E-22 3.2E-26 224.0 22.6 216 19-267 42-274 (622)
337 2ca6_A RAN GTPase-activating p 99.9 1.8E-24 6.2E-29 234.5 -2.8 250 14-263 29-339 (386)
338 4ay9_X Follicle-stimulating ho 99.9 1.7E-21 6E-26 208.0 18.6 240 19-264 11-256 (350)
339 1h6u_A Internalin H; cell adhe 99.9 3.4E-22 1.2E-26 209.4 12.0 215 40-270 18-233 (308)
340 3goz_A Leucine-rich repeat-con 99.9 2.1E-23 7.1E-28 224.1 0.2 239 16-254 21-306 (362)
341 3cvr_A Invasion plasmid antige 99.9 1.3E-21 4.6E-26 220.0 13.7 184 42-252 60-250 (571)
342 1z7x_W Ribonuclease inhibitor; 99.9 4.4E-24 1.5E-28 237.2 -6.6 250 18-267 86-383 (461)
343 3g06_A SSPH2 (leucine-rich rep 99.9 5.5E-21 1.9E-25 217.6 18.7 223 17-272 61-302 (622)
344 2ast_B S-phase kinase-associat 99.9 9.9E-23 3.4E-27 216.4 2.9 231 17-252 70-313 (336)
345 3cvr_A Invasion plasmid antige 99.8 6.8E-21 2.3E-25 214.2 16.8 187 18-231 60-253 (571)
346 2o6s_A Variable lymphocyte rec 99.8 4.4E-21 1.5E-25 188.9 13.4 151 20-173 10-160 (208)
347 1z7x_W Ribonuclease inhibitor; 99.8 4.1E-23 1.4E-27 229.4 -3.8 258 14-271 53-358 (461)
348 2o6s_A Variable lymphocyte rec 99.8 1.6E-20 5.5E-25 184.8 14.0 176 44-252 10-185 (208)
349 4ay9_X Follicle-stimulating ho 99.8 4.5E-20 1.5E-24 197.0 15.9 216 44-264 12-233 (350)
350 2v9t_B SLIT homolog 2 protein 99.8 1.5E-19 5.2E-24 179.3 14.3 153 19-174 13-165 (220)
351 1h6t_A Internalin B; cell adhe 99.8 4.8E-20 1.6E-24 191.3 11.0 186 22-246 29-214 (291)
352 1m9s_A Internalin B; cell inva 99.8 6.9E-20 2.3E-24 208.4 12.8 189 19-222 23-211 (605)
353 1h6t_A Internalin B; cell adhe 99.8 4.1E-20 1.4E-24 191.8 10.0 171 15-222 44-214 (291)
354 3e6j_A Variable lymphocyte rec 99.8 8E-19 2.8E-23 175.3 17.9 51 199-249 126-176 (229)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.2E-24 177.6 14.0 153 19-174 13-166 (220)
356 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.9E-24 206.6 11.5 192 40-247 20-212 (605)
357 2xot_A Amphoterin-induced prot 99.8 2.2E-19 7.6E-24 192.4 12.7 179 20-248 21-205 (361)
358 2xot_A Amphoterin-induced prot 99.8 2.5E-19 8.6E-24 192.0 11.7 156 91-269 41-204 (361)
359 3e6j_A Variable lymphocyte rec 99.8 9.4E-19 3.2E-23 174.8 15.1 153 19-175 21-173 (229)
360 1zth_A RIO1 serine protein kin 99.8 4.4E-20 1.5E-24 187.9 5.2 136 395-543 49-219 (258)
361 2v9t_B SLIT homolog 2 protein 99.8 1.4E-18 4.6E-23 172.5 15.7 156 68-249 14-169 (220)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-18 4.5E-23 172.5 15.4 157 68-250 14-171 (220)
363 1dce_A Protein (RAB geranylger 99.8 1.4E-20 4.8E-25 212.8 -1.5 182 38-249 346-550 (567)
364 4b8c_D Glucose-repressible alc 99.8 2.1E-19 7.1E-24 209.5 6.9 188 19-218 175-369 (727)
365 1xeu_A Internalin C; cellular 99.8 6.8E-19 2.3E-23 179.7 8.1 170 40-247 18-187 (263)
366 4ezg_A Putative uncharacterize 99.8 3.4E-18 1.2E-22 166.5 12.0 156 36-222 39-195 (197)
367 4ezg_A Putative uncharacterize 99.7 4.2E-18 1.5E-22 165.9 12.1 152 15-174 42-194 (197)
368 1dce_A Protein (RAB geranylger 99.7 4.4E-20 1.5E-24 208.7 -3.2 187 62-271 346-550 (567)
369 1xeu_A Internalin C; cellular 99.7 1.9E-18 6.3E-23 176.5 8.4 172 63-270 17-188 (263)
370 4b8c_D Glucose-repressible alc 99.7 1.1E-18 3.6E-23 203.6 4.1 167 19-194 193-369 (727)
371 1w8a_A SLIT protein; signaling 99.7 3.1E-17 1.1E-21 158.9 11.4 130 20-152 11-141 (192)
372 1w8a_A SLIT protein; signaling 99.7 2.2E-17 7.4E-22 160.1 10.2 130 44-176 11-141 (192)
373 3ogk_B Coronatine-insensitive 99.7 8.2E-19 2.8E-23 201.1 -1.9 190 81-270 285-529 (592)
374 2ell_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 153.1 9.6 134 41-176 24-162 (168)
375 2ell_A Acidic leucine-rich nuc 99.7 8E-17 2.7E-21 152.5 9.5 138 16-156 23-165 (168)
376 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.5E-21 152.3 12.0 128 19-150 12-139 (193)
377 2je0_A Acidic leucine-rich nuc 99.7 5.3E-17 1.8E-21 150.4 6.3 127 41-169 17-148 (149)
378 2wfh_A SLIT homolog 2 protein 99.6 5.9E-16 2E-20 149.9 12.4 127 44-174 13-139 (193)
379 4gyi_A RIO2 kinase; protein ki 99.6 2.8E-17 9.6E-22 173.6 3.1 137 394-542 96-264 (397)
380 2je0_A Acidic leucine-rich nuc 99.6 1.6E-16 5.4E-21 147.2 7.3 129 16-146 16-149 (149)
381 3ogk_B Coronatine-insensitive 99.6 1.3E-17 4.5E-22 191.1 -0.6 130 39-169 110-251 (592)
382 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.4E-20 146.2 11.4 131 19-152 9-139 (177)
383 2o6r_A Variable lymphocyte rec 99.6 3.7E-15 1.3E-19 142.3 13.2 130 43-175 9-138 (177)
384 1ds9_A Outer arm dynein; leuci 99.6 1.2E-17 4E-22 162.9 -5.1 151 12-167 13-180 (198)
385 3sb4_A Hypothetical leucine ri 99.6 2.3E-15 7.9E-20 159.0 10.6 88 185-274 227-317 (329)
386 3sb4_A Hypothetical leucine ri 99.6 4.5E-15 1.5E-19 156.8 11.7 214 16-238 48-327 (329)
387 1a9n_A U2A', U2A'; complex (nu 99.6 2.2E-15 7.5E-20 143.7 8.3 132 36-173 14-152 (176)
388 1ds9_A Outer arm dynein; leuci 99.6 5.5E-17 1.9E-21 158.1 -4.6 109 37-150 14-128 (198)
389 1a9n_A U2A', U2A'; complex (nu 99.6 3.6E-15 1.2E-19 142.2 7.6 132 13-150 15-153 (176)
390 2p1m_B Transport inhibitor res 99.5 2.3E-16 7.8E-21 180.8 -4.5 249 15-266 182-493 (594)
391 4fdw_A Leucine rich hypothetic 99.5 2.7E-13 9.4E-18 146.4 17.9 239 19-270 115-361 (401)
392 2p1m_B Transport inhibitor res 99.5 1.3E-15 4.4E-20 174.5 -0.4 159 109-269 285-471 (594)
393 4fdw_A Leucine rich hypothetic 99.5 3.8E-13 1.3E-17 145.3 18.0 242 12-265 131-381 (401)
394 3g39_A Variable lymphocyte rec 99.5 7E-14 2.4E-18 132.4 10.2 104 20-126 12-115 (170)
395 3g39_A Variable lymphocyte rec 99.5 8.8E-14 3E-18 131.6 10.0 107 42-151 10-116 (170)
396 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.9E-18 131.4 10.3 103 45-150 16-118 (174)
397 2r9u_A Variable lymphocyte rec 99.5 1.5E-13 5E-18 130.6 10.0 106 19-127 14-119 (174)
398 3un9_A NLR family member X1; l 99.3 2.4E-14 8.3E-19 153.2 -6.1 182 41-245 72-283 (372)
399 2ifg_A High affinity nerve gro 99.3 3.4E-12 1.2E-16 135.6 10.1 103 21-126 12-116 (347)
400 3tm0_A Aminoglycoside 3'-phosp 99.3 9.3E-12 3.2E-16 126.6 12.5 144 391-541 12-212 (263)
401 2ifg_A High affinity nerve gro 99.3 4.6E-12 1.6E-16 134.6 10.0 105 44-151 11-117 (347)
402 3un9_A NLR family member X1; l 99.3 3.4E-14 1.2E-18 152.0 -7.4 159 17-175 72-253 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.2 1.5E-11 5.2E-16 124.8 8.5 137 393-541 20-213 (264)
404 3sg8_A APH(2'')-ID; antibiotic 99.0 2.7E-10 9.3E-15 118.5 7.5 185 398-594 25-287 (304)
405 3dxp_A Putative acyl-COA dehyd 99.0 6.4E-10 2.2E-14 118.6 10.0 143 397-543 42-249 (359)
406 4fs7_A Uncharacterized protein 98.9 5.8E-09 2E-13 112.6 14.3 60 203-264 292-353 (394)
407 2ra8_A Uncharacterized protein 98.9 1.7E-10 5.7E-15 122.4 1.1 206 41-265 107-341 (362)
408 2ra8_A Uncharacterized protein 98.9 2.6E-10 8.8E-15 120.9 1.0 181 35-243 133-341 (362)
409 4fs7_A Uncharacterized protein 98.8 2.8E-08 9.4E-13 107.3 14.5 227 27-264 148-376 (394)
410 4gt6_A Cell surface protein; l 98.8 2.4E-07 8.1E-12 99.9 19.1 108 13-123 59-170 (394)
411 3r70_A Aminoglycoside phosphot 98.7 1E-07 3.6E-12 99.6 12.1 184 394-591 38-295 (320)
412 4gt6_A Cell surface protein; l 98.7 5.9E-07 2E-11 96.8 18.2 249 8-265 78-368 (394)
413 3rw6_A Nuclear RNA export fact 98.6 6E-09 2.1E-13 104.7 0.8 121 45-167 120-257 (267)
414 1io0_A Tropomodulin; LRR prote 98.6 1E-08 3.6E-13 97.9 1.7 119 32-150 27-164 (185)
415 3rw6_A Nuclear RNA export fact 98.6 4.8E-09 1.6E-13 105.4 -1.4 80 62-143 167-257 (267)
416 3d1u_A Putative fructosamine-3 98.5 2.4E-07 8.4E-12 94.9 10.8 77 396-476 18-97 (288)
417 3ovc_A Hygromycin-B 4-O-kinase 98.5 3E-07 1E-11 97.6 11.2 187 396-589 44-297 (362)
418 4h09_A Hypothetical leucine ri 98.4 7.3E-06 2.5E-10 87.6 19.7 240 12-262 41-318 (379)
419 3tdw_A Gentamicin resistance p 98.4 1.5E-06 5E-11 90.1 13.3 137 398-543 24-225 (306)
420 1io0_A Tropomodulin; LRR prote 98.4 4E-08 1.4E-12 93.8 0.9 113 14-126 33-164 (185)
421 4gkh_A Aminoglycoside 3'-phosp 98.4 3.2E-06 1.1E-10 85.8 13.9 135 400-542 31-223 (272)
422 4h09_A Hypothetical leucine ri 98.4 6.1E-06 2.1E-10 88.2 16.2 244 9-263 61-342 (379)
423 3ats_A Putative uncharacterize 98.2 8.3E-07 2.8E-11 94.2 4.7 80 398-477 25-121 (357)
424 2olc_A MTR kinase, methylthior 98.1 9.4E-06 3.2E-10 87.4 9.9 75 398-474 35-120 (397)
425 2q83_A YTAA protein; 2635576, 98.0 1.8E-05 6.2E-10 83.1 11.5 138 399-541 38-251 (346)
426 3e4g_A ATP synthase subunit S, 97.9 4.4E-06 1.5E-10 77.8 3.2 84 41-124 61-150 (176)
427 3jr1_A Putative fructosamine-3 97.8 7E-05 2.4E-09 77.3 11.4 137 397-538 40-232 (312)
428 3f7w_A Putative fructosamine-3 97.8 5.1E-05 1.8E-09 77.6 9.7 79 394-476 16-97 (288)
429 3e4g_A ATP synthase subunit S, 97.7 9.9E-06 3.4E-10 75.4 2.2 83 65-147 61-149 (176)
430 2pyw_A Uncharacterized protein 97.6 0.00023 7.8E-09 77.1 11.1 74 397-473 38-122 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 3.1E-05 1.1E-09 73.4 2.2 113 37-149 37-169 (197)
432 3dxq_A Choline/ethanolamine ki 97.3 0.0006 2.1E-08 70.0 8.8 136 398-542 23-202 (301)
433 1zyl_A Hypothetical protein YI 97.2 0.0018 6E-08 67.3 12.1 140 399-542 32-223 (328)
434 3csv_A Aminoglycoside phosphot 97.2 0.0018 6.3E-08 67.4 12.2 140 399-543 24-218 (333)
435 1pgv_A TMD-1, tropomodulin TMD 97.2 8.9E-05 3E-09 70.3 1.4 112 15-126 39-170 (197)
436 1nw1_A Choline kinase (49.2 KD 97.2 0.00052 1.8E-08 74.3 7.3 72 398-475 78-158 (429)
437 2ppq_A HSK, HK, homoserine kin 97.0 0.0014 4.9E-08 67.8 8.9 140 399-541 28-216 (322)
438 3feg_A Choline/ethanolamine ki 97.0 0.0022 7.6E-08 67.8 10.1 138 399-541 56-253 (379)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.0038 1.3E-07 67.8 9.3 74 398-476 113-188 (458)
440 3i1a_A Spectinomycin phosphotr 96.7 0.012 4.2E-07 61.2 12.8 31 512-542 206-236 (339)
441 3rfe_A Platelet glycoprotein I 96.6 0.003 1E-07 55.7 6.5 60 187-248 11-71 (130)
442 3rfe_A Platelet glycoprotein I 96.5 0.0037 1.3E-07 55.1 5.9 56 93-150 12-68 (130)
443 3c5i_A Choline kinase; choline 96.4 0.0031 1.1E-07 66.7 6.2 72 399-475 39-120 (369)
444 2yle_A Protein spire homolog 1 96.2 0.017 5.7E-07 55.0 9.2 103 474-593 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.9 0.016 5.4E-07 61.6 8.5 139 399-541 58-279 (401)
446 3mes_A Choline kinase; malaria 95.2 0.019 6.6E-07 61.5 5.9 73 399-476 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.8 0.43 1.5E-05 50.7 7.8 29 514-542 246-280 (401)
448 4ann_A ESSB; membrane protein, 85.0 2 7E-05 40.6 7.4 114 447-594 43-157 (215)
449 4ano_A ESSB; membrane protein, 83.5 4 0.00014 38.8 8.8 114 447-594 48-162 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 82.4 0.23 7.8E-06 53.9 -0.4 62 396-460 145-215 (463)
451 2lz0_A Uncharacterized protein 52.2 25 0.00085 28.6 5.7 38 83-121 14-51 (100)
452 2lz0_A Uncharacterized protein 46.8 33 0.0011 27.8 5.6 46 52-98 7-52 (100)
453 2x6h_A GH13170P, VPS34, phosph 44.8 1.5E+02 0.0051 33.3 12.1 45 490-541 529-575 (696)
454 3ls8_A Phosphatidylinositol 3- 36.5 2.6E+02 0.0089 30.8 12.3 82 452-541 402-501 (614)
455 1cja_A Protein (actin-fragmin 35.4 54 0.0018 33.1 6.1 137 397-542 73-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.3e-55 Score=453.54 Aligned_cols=256 Identities=28% Similarity=0.499 Sum_probs=214.3
Q ss_pred cCccccCcccCCCcccEEEcccC------CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999853 478899999987777777889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhc------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEE
Q 004732 467 IYEYLENNSLARALFEH------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKI 534 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 534 (733)
|||||++|+|.++|+.. ...++|.++.+|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 247999999999999999999999986 999999999999999999999
Q ss_pred cccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhh
Q 004732 535 SDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 612 (733)
Q Consensus 535 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 612 (733)
+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...+...+.... ..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i----~~ 245 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI----TQ 245 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----HH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----Hc
Confidence 999999865443322 2344679999999999999999999999999999999999 89999776655444322 12
Q ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 613 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
+...... ..+ ...+.+++.+||+.||++||||.||++.|+...
T Consensus 246 ~~~~~~p-----~~~----~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 246 GRVLQRP-----RTC----PQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp TCCCCCC-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCC-----ccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2221111 122 235889999999999999999999999998643
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.3e-54 Score=452.60 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=212.4
Q ss_pred CccccCcccCCCcccEEEcccC------CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 394 NFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
+++..+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455678999999999999852 4688999999754 33345789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC
Q 004732 467 IYEYLENNSLARALFEH---------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 531 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 531 (733)
|||||++|+|.++|... ...++|.++.+|+.|||+||+|||+.+ ||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 99999999999999643 236999999999999999999999986 999999999999999999
Q ss_pred eEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004732 532 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 609 (733)
Q Consensus 532 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 609 (733)
+||+|||+|+....... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||...+...+...+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i--- 260 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI--- 260 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH---
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence 99999999986654332 23445689999999999999999999999999999999998 89999776655544332
Q ss_pred HhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 610 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
..+...... ......+.+++.+||+.||++||||.||++.|+++.+
T Consensus 261 -~~~~~~~~p---------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 261 -RNRQVLPCP---------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp -HTTCCCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred -HcCCCCCCc---------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 222222211 1223458899999999999999999999999997654
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-54 Score=455.90 Aligned_cols=257 Identities=28% Similarity=0.464 Sum_probs=208.6
Q ss_pred cCccccCcccCCCcccEEEcccC------CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46677789999999999999853 478999999987777777889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCe
Q 004732 467 IYEYLENNSLARALFEHR--------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 532 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~ 532 (733)
|||||++|+|.++++... ..++|.++++|+.|||+||+|||+.+ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997432 35999999999999999999999986 9999999999999999999
Q ss_pred EEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHH
Q 004732 533 KISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLK 610 (733)
Q Consensus 533 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 610 (733)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||...+.......+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i---- 273 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI---- 273 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH----
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH----
Confidence 9999999986654332 23445789999999999999999999999999999999999 89999776655444322
Q ss_pred hhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 611 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
..+...... ..++ ..+.+++.+||+.||++||||.||++.|+.+..
T Consensus 274 ~~g~~~~~p-----~~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 274 TQGRELERP-----RACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHTCCCCCC-----TTCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCc-----cccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 122211111 1222 358899999999999999999999999987644
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-54 Score=445.62 Aligned_cols=258 Identities=26% Similarity=0.422 Sum_probs=203.9
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.+++...+.||+|+||+||+|++.+ .||||+++.. .....+.|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567778899999999999998753 5999998653 34455789999999999999999999999865 56899999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC-c
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN-T 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~-~ 548 (733)
||++|+|.++++.....++|.++.+|+.|||+||+|||+.+ ||||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999877778999999999999999999999986 9999999999999999999999999998765432 2
Q ss_pred ccccccccCCCcccHHHHhh---CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||...+........ ...+.....+.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~~~~~p~~~----- 260 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRGYASPDLS----- 260 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHTTCCCCCST-----
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---HhcCCCCCCcc-----
Confidence 33455789999999999974 35899999999999999999999999655433222211 11111111000
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
..+......+.+++.+||+.||++||||.||++.|+.+
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11112234588999999999999999999999998854
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.5e-52 Score=439.34 Aligned_cols=249 Identities=22% Similarity=0.375 Sum_probs=204.6
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
++|...+.||+|+||+||+|+ ..+|+.||||++... .....+.|.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 578899999999999999999 567999999998654 33445689999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+||+|.+++... ...+++.+++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999754 446799999999999999999999996 9999999999999999999999999998765422
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...+...+.... . .+.... ....+
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i---~-~~~~~~-----~~~~~- 249 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI---I-SGSFPP-----VSLHY- 249 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---H-HTCCCC-----CCTTS-
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---H-cCCCCC-----CCccC-
Confidence 2234568999999999999999999999999999999999999999877655443321 1 111111 11122
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+||+.||++|||+.|+++
T Consensus 250 ---s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 ---SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234889999999999999999999976
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-52 Score=438.56 Aligned_cols=249 Identities=25% Similarity=0.396 Sum_probs=210.2
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEcc
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 471 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 471 (733)
..|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4688889999999999999994 579999999997654445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccc
Q 004732 472 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 551 (733)
Q Consensus 472 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 551 (733)
++|+|.+++.. ..+++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+....... ..
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 99999999865 36999999999999999999999996 99999999999999999999999999987654332 23
Q ss_pred cccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHH
Q 004732 552 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 631 (733)
Q Consensus 552 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (733)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||...+......... . .... ........
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~-~~~~-------~~~~~~~~ 296 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR---D-NLPP-------RLKNLHKV 296 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---H-SSCC-------CCSCGGGS
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH---c-CCCC-------CCCccccC
Confidence 45789999999999999999999999999999999999999997766554433221 1 1100 01111122
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 632 VMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 632 ~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+||+.||++|||+.|+++
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 345889999999999999999999876
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-52 Score=435.63 Aligned_cols=253 Identities=25% Similarity=0.257 Sum_probs=205.3
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.+.|...+.||+|+||+||+|+ ..+|+.||||+++.... +.+|++++++++|||||+++++|.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 3567788899999999999999 45799999999965322 24799999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC-CeEEcccCccccCcccCcc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~~~~~ 549 (733)
|+||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+|+........
T Consensus 132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999765 47999999999999999999999986 99999999999999987 6999999999876543221
Q ss_pred ----cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 550 ----ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 550 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
....++||+.|||||++.+..|+.++|||||||++|||++|+.||...+...+.... ........+
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i--~~~~~~~~~-------- 277 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI--ASEPPPIRE-------- 277 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH--HHSCCGGGG--------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH--HcCCCCchh--------
Confidence 123468999999999999999999999999999999999999999665443332211 111111111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.+......+.+++.+||+.||.+|||+.|+++.|....
T Consensus 278 -~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 278 -IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp -SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 11122345888999999999999999999999887543
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.7e-52 Score=428.46 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=209.8
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|+..+.||+|+||+||+|+ ..+|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 468889999999999999999 567999999998653 2334577999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC-
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN- 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~- 547 (733)
|||+||+|.+++.+. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999754 47999999999999999999999996 9999999999999999999999999999765433
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
......++||+.|||||++.+..|+.++||||+||++|||++|+.||...+...+..... . +.. . ....+
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~-~~~-~-----~p~~~ 257 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII---K-LEY-D-----FPEKF 257 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-TCC-C-----CCTTC
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---c-CCC-C-----CCccc
Confidence 233456789999999999999999999999999999999999999998776554443221 1 111 1 11122
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVL 657 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl 657 (733)
+ ..+.+++.+|++.||++|||+.|+.
T Consensus 258 s----~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 F----PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred C----HHHHHHHHHHccCCHhHCcChHHHc
Confidence 2 3478999999999999999999863
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-51 Score=423.87 Aligned_cols=245 Identities=27% Similarity=0.430 Sum_probs=197.4
Q ss_pred cccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEEEEE
Q 004732 396 ATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQLLLIY 468 (733)
Q Consensus 396 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 468 (733)
+..+.||+|+||+||+|+ ..++..||||.+... .....+.|.+|++++++++|||||+++++|.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 456689999999999999 457899999998643 34445779999999999999999999999875 34589999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC-CCCeEEcccCccccCcccC
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~~~~~~ 547 (733)
|||++|+|.+++.+. ..+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 999999999999754 47999999999999999999999884 35999999999999984 789999999999864332
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... .+.. .. ..+......+ ..
T Consensus 186 --~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~---~i-~~~~~~~~~~----~~ 254 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RV-TSGVKPASFD----KV 254 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HH-TTTCCCGGGG----GC
T ss_pred --ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHH---HH-HcCCCCCCCC----cc
Confidence 2345789999999998864 6999999999999999999999999654322 2211 11 1111111111 11
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.+ ..+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~----~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 255 AI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22 24788999999999999999999976
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4e-51 Score=440.00 Aligned_cols=250 Identities=25% Similarity=0.403 Sum_probs=211.1
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.+.|+..+.||+|+||+||+|+ ..+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 3568899999999999999999 457999999999765555556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
|+||+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+....... .
T Consensus 230 ~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 9999999998653 6999999999999999999999997 99999999999999999999999999987654332 2
Q ss_pred ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHH
Q 004732 551 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 630 (733)
Q Consensus 551 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (733)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+......... . ...... ......
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~-~~~~~~---~~~~~~--- 373 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR---D-NLPPRL---KNLHKV--- 373 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---H-SCCCCC---SCTTSS---
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH---c-CCCCCC---cccccC---
Confidence 345789999999999999999999999999999999999999997776554433221 1 111010 001112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 631 QVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 631 ~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+||+.||++|||+.|+++
T Consensus 374 -s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 374 -SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 235889999999999999999999876
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-50 Score=413.65 Aligned_cols=245 Identities=26% Similarity=0.416 Sum_probs=192.6
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|+..+.||+|+||+||+|+ ..+|+.||||++... .......+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 578999999999999999998 467999999998654 2234567999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||| +|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 68999998765 47999999999999999999999996 9999999999999999999999999998654432
Q ss_pred ccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.....+||+.|||||++.+..+ +.++||||+||++|||++|+.||...+...+.... . .+.. . .....
T Consensus 167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i---~-~~~~-~-----~p~~~ 235 (275)
T 3hyh_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---S-NGVY-T-----LPKFL 235 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-HTCC-C-----CCTTS
T ss_pred -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---H-cCCC-C-----CCCCC
Confidence 2345789999999999988775 57999999999999999999999776554433211 1 1111 0 11122
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+|++.||++|||+.|+++
T Consensus 236 ----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 ----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234789999999999999999999987
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.1e-51 Score=435.92 Aligned_cols=258 Identities=26% Similarity=0.374 Sum_probs=209.8
Q ss_pred hhcCccccCcccCCCcccEEEcccC------CCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCC-CceeeEeeEEEeC-
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQH-PNLVKLYGCCIEG- 461 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~- 461 (733)
..++|...+.||+|+||+||+|++. .++.||||.+.... ....+.|.+|+++|++++| ||||+++|+|.++
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 4567889999999999999999743 24689999997643 3345679999999999965 8999999999775
Q ss_pred CeEEEEEEccCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe
Q 004732 462 NQLLLIYEYLENNSLARALFEH---------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 526 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill 526 (733)
+..++|||||++|+|.++|+.. ...++|.++..++.|||+||+|||+++ ||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceee
Confidence 5689999999999999999743 235899999999999999999999986 9999999999999
Q ss_pred cCCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004732 527 DKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 604 (733)
Q Consensus 527 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~ 604 (733)
++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.........
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~- 297 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF- 297 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH-
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH-
Confidence 99999999999999876544332 3445789999999999999999999999999999999998 99999654322211
Q ss_pred HHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 605 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
......+......+ ..+ ..+.+++.+||+.||++||||.||++.|+.+
T Consensus 298 --~~~i~~g~~~~~p~-----~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 298 --CRRLKEGTRMRAPD-----YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp --HHHHHHTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHcCCCCCCCc-----cCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 11112222222211 122 3488899999999999999999999998854
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.7e-51 Score=426.72 Aligned_cols=262 Identities=28% Similarity=0.340 Sum_probs=197.8
Q ss_pred CccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC----eEEEEEE
Q 004732 394 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN----QLLLIYE 469 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~e 469 (733)
+|...+.||+|+||+||+|++ +|+.||||++..... ....+.+|+..+.+++|||||+++|+|.+++ ..++|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999997 589999999865322 1222344566667889999999999998754 6899999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES-----RIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
||++|+|.++++.. .++|..+.+++.|+|+||+|||+++ .++||||||||+|||++.++.+||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999754 6899999999999999999999862 3469999999999999999999999999998665
Q ss_pred ccCcc---cccccccCCCcccHHHHhhC------CCCccchhHhHHHHHHHHHhCCCCCCccchh------------hHH
Q 004732 545 EENTH---ISTRVAGTIGYMAPEYAMRG------HLTEKADVYSFGIVALEIVSGRSNVTKEDMF------------YLL 603 (733)
Q Consensus 545 ~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~------------~~~ 603 (733)
..... .....+||+.|||||++.+. .++.++|||||||++|||+||+.|+...... ...
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 43322 12346799999999999764 3678999999999999999998776322110 011
Q ss_pred HHHHHHHhhCcccccccCCCC-CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 604 DWALVLKEQGKLMELVDTNPG-SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.........+ .++... .....+....+.+++.+||+.||++||||.||++.|+++.
T Consensus 240 ~~~~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 240 EMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1111111111 111111 1112345567889999999999999999999999998643
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.5e-51 Score=420.42 Aligned_cols=242 Identities=25% Similarity=0.336 Sum_probs=195.3
Q ss_pred cCccccCcccCCCcccEEEccc----CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
++|+..+.||+|+||+||+|+. ..++.||||++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5688999999999999999974 247899999986542 2233468899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
|||||+||+|.+++.+. ..+++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999764 47999999999999999999999996 999999999999999999999999999865433
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+......... . ... . ....
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~---~-~~~-~-----~p~~ 248 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL---K-AKL-G-----MPQF 248 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCC-C-----CCTT
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH---c-CCC-C-----CCCc
Confidence 22 2345789999999999999999999999999999999999999998776554433221 1 111 0 1112
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSM 653 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~ 653 (733)
. ...+.+++.+||+.||++|||+
T Consensus 249 ~----s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 249 L----SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSTTC
T ss_pred C----CHHHHHHHHHHcccCHHHCCCC
Confidence 2 2348899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.2e-49 Score=407.72 Aligned_cols=248 Identities=21% Similarity=0.362 Sum_probs=188.2
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC--------
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGN-------- 462 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 462 (733)
++|+..+.||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 368888999999999999999 4579999999986543 334567899999999999999999999987644
Q ss_pred ----eEEEEEEccCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcc
Q 004732 463 ----QLLLIYEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 536 (733)
Q Consensus 463 ----~~~lV~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 536 (733)
..|+|||||++|+|.+++.... ...++..++.++.||++||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 3799999999999999997543 23566778999999999999999996 99999999999999999999999
Q ss_pred cCccccCcccCcc-----------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHH
Q 004732 537 FGLAKLDEEENTH-----------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDW 605 (733)
Q Consensus 537 fGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~ 605 (733)
||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||...... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~--~~~ 236 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER--VRT 236 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH--HHH
Confidence 9999876543221 1234679999999999999999999999999999999996 77543211 110
Q ss_pred HHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 606 ALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.. ......... ........+.+++.+||+.||.+|||+.|+++
T Consensus 237 ~~-~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LT-DVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH-HHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 10 111111111 01122234678999999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=406.12 Aligned_cols=262 Identities=20% Similarity=0.324 Sum_probs=204.9
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe------CCe
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE------GNQ 463 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 463 (733)
++|...+.||+|+||+||+|+ ..+|+.||||++... .....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 578999999999999999999 467999999999654 23345678899999999999999999999764 367
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.|+|||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 6799988654 58999999999999999999999997 999999999999999999999999999866
Q ss_pred cccC---cccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccc--
Q 004732 544 EEEN---THISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME-- 617 (733)
Q Consensus 544 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 617 (733)
.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+...................
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 4322 2234457899999999998875 579999999999999999999999987766554433222211110000
Q ss_pred ---------cccCC-CCCCCCHH-----HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 618 ---------LVDTN-PGSNFDKE-----QVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 618 ---------~~~~~-~~~~~~~~-----~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+... .....+.. ....+.+++.+|++.||++|||+.|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 00011111 12357899999999999999999999863
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.2e-46 Score=395.69 Aligned_cols=203 Identities=28% Similarity=0.448 Sum_probs=173.4
Q ss_pred hhhHHhhhcCccccCcccCCCcccEEEccc----CCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEE
Q 004732 385 YLQIKAATNNFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCI 459 (733)
Q Consensus 385 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 459 (733)
|..+....+.|++.+.||+|+||+||+|+. ..++.||||.+.... ...++.+|+++|+.+ +|||||++++++.
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 334445568899999999999999999974 246889999986543 346788999999998 6999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC-CCeEEcccC
Q 004732 460 EGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFG 538 (733)
Q Consensus 460 ~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfG 538 (733)
+++..++|||||++|+|.+++. .+++.++..++.|++.||+|||++| ||||||||+|||++.+ +.+||+|||
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred ECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 9999999999999999999883 5899999999999999999999997 9999999999999877 789999999
Q ss_pred ccccCcccCc---------------------------ccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhC
Q 004732 539 LAKLDEEENT---------------------------HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSG 590 (733)
Q Consensus 539 la~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg 590 (733)
+|+....... ......+||+.|+|||++.+. .|+.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9985543211 112345799999999999875 589999999999999999999
Q ss_pred CCCCCc
Q 004732 591 RSNVTK 596 (733)
Q Consensus 591 ~~p~~~ 596 (733)
+.||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999954
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-45 Score=390.80 Aligned_cols=278 Identities=43% Similarity=0.766 Sum_probs=239.6
Q ss_pred hhHHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 386 LQIKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 386 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.++..++++|+..+.||+|+||.||+|+..+|+.||||++........+.+.+|+++++.++||||+++++++.+++..+
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 34567889999999999999999999998889999999987766666678999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 466 LIYEYLENNSLARALFEHR---LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999999986432 35899999999999999999999986 99999999999999999999999999986
Q ss_pred CcccC-cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccc---hhhHHHHHHHHHhhCccccc
Q 004732 543 DEEEN-THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKED---MFYLLDWALVLKEQGKLMEL 618 (733)
Q Consensus 543 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~ 618 (733)
..... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ......|.......+.....
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 54322 222344568999999999999999999999999999999999999995432 33445565555556666677
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 619 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 619 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
+++........+....+.+++.+||+.||++|||+.|+++.|+.....
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 777776677888889999999999999999999999999999865543
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.5e-45 Score=389.57 Aligned_cols=279 Identities=46% Similarity=0.801 Sum_probs=239.6
Q ss_pred hhhHHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccCh-hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 385 YLQIKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 385 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
+.++..++++|...+.||+|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||++++++|.++..
T Consensus 22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 101 (326)
T 3uim_A 22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 101 (326)
T ss_dssp THHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred HHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCc
Confidence 5678889999999999999999999999988899999999876432 223468999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 464 LLLIYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~ 181 (326)
T 3uim_A 102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181 (326)
T ss_dssp CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSC
T ss_pred eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccc
Confidence 99999999999999999743 235999999999999999999999983334999999999999999999999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCc-----cchhhHHHHHHHHHhhCcc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTK-----EDMFYLLDWALVLKEQGKL 615 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~-----~~~~~~~~~~~~~~~~~~~ 615 (733)
+..............||+.|+|||.+.+..++.++|||||||++|||++|+.||.. .......+|..........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (326)
T 3uim_A 182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261 (326)
T ss_dssp EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS
T ss_pred cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh
Confidence 87765555555566799999999999999999999999999999999999999942 2233445565555555566
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
....+......+..+....+.+++.+||+.||.+|||+.||++.|++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 666677677778888899999999999999999999999999999863
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-45 Score=414.26 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=212.8
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|.+.+.||+|+||+||+|+ ..+|+.||||.+........+.+.+|+++|+.++|||||+++++|.++...++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 3689999999999999999999 467999999999776655667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC--CCeEEcccCccccCcccCc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD--LNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~--~~~kl~DfGla~~~~~~~~ 548 (733)
|+||+|.+++......+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999766668999999999999999999999996 9999999999999854 7899999999987654332
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+......... ...... ........
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~--~~~~~~----~~~~~~~~- 383 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK--SCDWNM----DDSAFSGI- 383 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--TTCCCC----CSGGGTTS-
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH--hCCCCC----CcccccCC-
Confidence 344689999999999999999999999999999999999999997766554433211 111111 00011112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+.+++.+||+.||.+|||+.|+++.
T Consensus 384 ---s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 ---SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2347889999999999999999999873
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3e-45 Score=411.36 Aligned_cols=250 Identities=26% Similarity=0.313 Sum_probs=200.3
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC---hhcHHHHHH---HHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFIN---EIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
..++|...++||+|+||+||+|+ ..+|+.||||++.+.. ......+.+ ++.+++.++|||||+++++|.+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 35789999999999999999999 5579999999986431 122233334 4566777899999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
+|+|||||+||+|.+++... ..+++..+..++.||+.||+|||++| ||||||||+|||++.+|.+||+|||+|+..
T Consensus 267 lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999999765 47999999999999999999999997 999999999999999999999999999866
Q ss_pred cccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 622 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (733)
.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||...+............. ... .
T Consensus 343 ~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~-~~~------~ 412 (689)
T 3v5w_A 343 SKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-MAV------E 412 (689)
T ss_dssp SSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH-CCC------C
T ss_pred CCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC-CCC------C
Confidence 5432 345789999999999975 5799999999999999999999999965443222211111111 110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004732 623 PGSNFDKEQVMVMINVALLCANASPTIRPS-----MSSVLR 658 (733)
Q Consensus 623 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-----~~~vl~ 658 (733)
....+ ...+.+++.+|++.||.+|++ +.||.+
T Consensus 413 ~p~~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 413 LPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCTTS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCccC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11122 334889999999999999998 577643
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-44 Score=375.95 Aligned_cols=262 Identities=27% Similarity=0.431 Sum_probs=212.5
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||+||+|+. .+++.||+|.+........+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 35677889999999999999994 57899999998776666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
+++|+|.+++......+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887778999999999999999999999996 9999999999999999999999999998654432211
Q ss_pred -------------ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccc
Q 004732 551 -------------STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME 617 (733)
Q Consensus 551 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 617 (733)
.....||+.|+|||.+.+..++.++|||||||++|||++|..|+.......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~~~ 238 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------GLNVRG 238 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------SBCHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------hhhhhc
Confidence 124679999999999999999999999999999999999999984321110000 000000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 618 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 618 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
..+.......+ ..+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 239 ~~~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 239 FLDRYCPPNCP----PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHTCCTTCC----TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00000001111 23888999999999999999999999999765543
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.8e-43 Score=365.10 Aligned_cols=252 Identities=27% Similarity=0.455 Sum_probs=210.6
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
..++|...+.||+|+||+||+|+ ..+|+.||||.+........+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 34678999999999999999998 56799999999876655556788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 98 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 99999999999754 6899999999999999999999996 99999999999999999999999999986554332
Q ss_pred cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCH
Q 004732 550 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 629 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (733)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+........ ...... . ...+.
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~~~~~~-~-------~~~~~ 240 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTP-E-------LQNPE 240 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHHCSC-C-------CSCGG
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCC-C-------CCCcc
Confidence 234467999999999999999999999999999999999999999766543322211 111110 0 01111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 630 EQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 630 ~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 223458899999999999999999999863
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.4e-43 Score=362.37 Aligned_cols=255 Identities=27% Similarity=0.453 Sum_probs=214.8
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccC
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 472 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 472 (733)
++|...+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++.++...++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5678889999999999999998888999999997543 345679999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccccc
Q 004732 473 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 552 (733)
Q Consensus 473 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 552 (733)
+|+|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...........
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999877778999999999999999999999996 999999999999999999999999999866554333344
Q ss_pred ccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHH
Q 004732 553 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 631 (733)
Q Consensus 553 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (733)
...||+.|+|||.+.+..++.++||||+|+++|||++ |+.||............ . ... ........
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~---~-~~~-----~~~~~~~~---- 232 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI---S-TGF-----RLYKPRLA---- 232 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H-TTC-----CCCCCTTS----
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH---h-cCc-----cCCCCCcC----
Confidence 5567889999999999999999999999999999999 99999766544433221 1 110 00111112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 632 VMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 632 ~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
...+.+++.+||+.+|++||++.++++.|+++.
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 234888999999999999999999999998643
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.5e-43 Score=371.81 Aligned_cols=258 Identities=27% Similarity=0.440 Sum_probs=210.7
Q ss_pred hcCccccCcccCCCcccEEEcccC----CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
.++|...+.||+|+||.||+|+.. .+..||||.+... .....+.|.+|++++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 456788899999999999999853 3456999999764 34445789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877678999999999999999999999996 999999999999999999999999999876543
Q ss_pred Ccc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 547 NTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 547 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+... .
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~~~~~~-----~- 274 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV----EEGYRL-----P- 274 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH----HTTCCC-----C-
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH----HcCCCC-----C-
Confidence 222 1223456788999999999999999999999999999999 99999766554433221 111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.+......+.+++.+||+.||.+||++.+|++.|+++..
T Consensus 275 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 275 ---APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111123358899999999999999999999999996544
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.6e-43 Score=370.74 Aligned_cols=263 Identities=29% Similarity=0.460 Sum_probs=206.2
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.....++|...+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 344567889999999999999999986 58899999986543 334467899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 466 LIYEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999999997543 23899999999999999999999884 24999999999999999999999999999854
Q ss_pred cccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+......... ....... .
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~~-----~ 260 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---FKCKRLE-----I 260 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---HSCCCCC-----C
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCCCC-----C
Confidence 4322 22334679999999999999999999999999999999999999997665444332221 1111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
...++ ..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 261 ~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 261 PRNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11222 348899999999999999999999999986654
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.8e-43 Score=378.17 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=211.6
Q ss_pred hcCccccCcccCCCcccEEEccc--------CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL--------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG 461 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 461 (733)
.++|...+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+++++++ +||||++++++|.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788899999999999999974 245679999997643 33456799999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe
Q 004732 462 NQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 526 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill 526 (733)
+..++||||+++|+|.+++.... ..+++.+++.++.||++||+|||+.+ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997543 35899999999999999999999996 9999999999999
Q ss_pred cCCCCeEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004732 527 DKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 604 (733)
Q Consensus 527 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~ 604 (733)
+.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||..........
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999986554322 22334567889999999999999999999999999999999 999996655444332
Q ss_pred HHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 605 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.. ..+.... .+......+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 317 ~~----~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 317 LL----KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HH----HTTCCCC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH----hcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 21 1111111 111122358899999999999999999999999986544
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.2e-43 Score=359.29 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=216.2
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
..++|...+.||+|+||.||+|...++..||||.+.... ...+++.+|++++++++||||+++++++.++...++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 346788899999999999999998888899999997543 3456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
+++++|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999877667999999999999999999999996 9999999999999999999999999998766554444
Q ss_pred ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCH
Q 004732 551 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 629 (733)
Q Consensus 551 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (733)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+... . .....
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~--~---~~~~~-- 230 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV----SQGHRL--Y---RPHLA-- 230 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----HTTCCC--C---CCTTS--
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH----HcCCCC--C---CCCcC--
Confidence 444567788999999999899999999999999999999 99999655443322211 111110 0 01112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 630 EQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 630 ~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
...+.+++.+||+.+|++|||+.++++.|+.+.+
T Consensus 231 --~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 231 --SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp --CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred --hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 2348889999999999999999999999997654
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=373.31 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=200.2
Q ss_pred hhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
...++|...+.||+|+||+||+|+ ..+|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 345789999999999999999998 4689999999986543 22335788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 87 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 99999999999997543 7999999999999999999999996 9999999999999999999999999998655444
Q ss_pred cccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||...+......... . +.. . ....
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~---~-~~~-~-----~p~~ 232 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM---R-GKY-D-----VPKW 232 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-TCC-C-----CCTT
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---c-CCC-C-----CCCC
Confidence 444455789999999999988775 899999999999999999999997765544332211 1 111 0 1111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 233 ~s----~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 233 LS----PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CC----HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 22 347789999999999999999999864
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-42 Score=367.50 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=208.5
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
..++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356788999999999999999994 68999999998654 334456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999999755 47999999999999999999999996 9999999999999999999999999998654432
Q ss_pred cccccccccCCCcccHHHHhhCCCC-ccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLT-EKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||...+......... .+.. .....
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~~~------~~p~~ 236 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL----RGKY------RIPFY 236 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HCCC------CCCTT
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCC------CCCCC
Confidence 23456799999999999988765 79999999999999999999997766544333211 1111 00111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+.+++.+|++.||.+|||+.|+++.
T Consensus 237 ----~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 ----MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22347889999999999999999999864
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.3e-43 Score=377.52 Aligned_cols=258 Identities=27% Similarity=0.477 Sum_probs=201.7
Q ss_pred hcCccccCcccCCCcccEEEcccC----CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
.++|...+.||+|+||.||+|+.. ++..||||.++.. .....+.|.+|++++++++||||+++++++.+++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457889999999999999999854 5778999999764 33445689999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++......+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877778999999999999999999999986 999999999999999999999999999876543
Q ss_pred Cccc--ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 547 NTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 547 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||............ ..+... ..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i----~~~~~~-----~~ 271 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----DEGYRL-----PP 271 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH----HTTEEC-----CC
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCC-----CC
Confidence 2221 122345788999999999999999999999999999998 99999765544333221 111110 01
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.. .....+.+++.+||+.||.+||++.+|++.|+....
T Consensus 272 ~~----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 272 PM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp CT----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Cc----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 11 123458899999999999999999999999987644
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6e-42 Score=360.23 Aligned_cols=274 Identities=37% Similarity=0.629 Sum_probs=223.1
Q ss_pred hhhhHHhhhcCcccc------CcccCCCcccEEEcccCCCcEEEEEEcccc----ChhcHHHHHHHHHHHHhCCCCceee
Q 004732 384 FYLQIKAATNNFATD------NNIGEGGFGPVYKGLLADGTAIAVKQLSSK----SKQGNREFINEIGMISALQHPNLVK 453 (733)
Q Consensus 384 ~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~ 453 (733)
.+.++..++++|... +.||+|+||.||+|+. +++.||||++... .....+.+.+|++++++++||||++
T Consensus 16 ~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 94 (307)
T 2nru_A 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94 (307)
T ss_dssp CHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 367788899999888 8999999999999987 5889999998653 2234567899999999999999999
Q ss_pred EeeEEEeCCeEEEEEEccCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC
Q 004732 454 LYGCCIEGNQLLLIYEYLENNSLARALFE--HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 531 (733)
Q Consensus 454 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 531 (733)
+++++.+++..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~ 171 (307)
T 2nru_A 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFT 171 (307)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCC
T ss_pred EEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCc
Confidence 99999999999999999999999999973 3346999999999999999999999986 999999999999999999
Q ss_pred eEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhh-HHHHHHHH
Q 004732 532 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVL 609 (733)
Q Consensus 532 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~-~~~~~~~~ 609 (733)
+||+|||+++....... .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||....... ...+....
T Consensus 172 ~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 250 (307)
T 2nru_A 172 AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250 (307)
T ss_dssp EEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHH
T ss_pred EEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHh
Confidence 99999999986554322 22334679999999998864 58999999999999999999999996443222 22222222
Q ss_pred Hh-hCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 610 KE-QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 610 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
.. ...+.+.++... ..........+.+++.+||+.+|.+||++.+|++.|+++
T Consensus 251 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp HTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 22 222233333332 334566778899999999999999999999999999864
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-42 Score=361.23 Aligned_cols=261 Identities=26% Similarity=0.348 Sum_probs=207.1
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+ ..+++.||+|.+... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 4578889999999999999998 457899999998543 233446789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999999754 37999999999999999999999996 9999999999999999999999999998766544
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||........... .. ........ .......
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~ 240 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK---HI-QDSVPNVT-TDVRKDI 240 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH---HH-SSCCCCHH-HHSCTTS
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---Hh-hccCCCcc-hhcccCC
Confidence 4444556799999999999999999999999999999999999999976654332211 11 11111110 0011112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHhccCcc
Q 004732 628 DKEQVMVMINVALLCANASPTIRP-SMSSVLRMLECGVD 665 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RP-t~~~vl~~L~~~~~ 665 (733)
...+.+++.+|++.||.+|| ++.++.+.|+....
T Consensus 241 ----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 241 ----PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred ----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 23488899999999999999 99999999987654
No 34
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-42 Score=359.86 Aligned_cols=257 Identities=24% Similarity=0.391 Sum_probs=211.7
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
..++|...+.||+|+||.||+|...++..||||.+.... ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345778889999999999999998888899999997543 2357799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
+++|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999876668999999999999999999999996 9999999999999999999999999998665443333
Q ss_pred ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCH
Q 004732 551 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 629 (733)
Q Consensus 551 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (733)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...+........ .. +. ........
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~---~~-~~-----~~~~~~~~-- 246 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI---AQ-GL-----RLYRPHLA-- 246 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HT-TC-----CCCCCTTC--
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH---hc-cc-----CCCCCCcC--
Confidence 344567889999999999999999999999999999998 99999665543332211 11 11 01111112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 630 EQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 630 ~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
...+.+++.+||+.+|.+|||+.++++.|++..
T Consensus 247 --~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 247 --SEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp --CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 235888999999999999999999999998654
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.4e-42 Score=362.81 Aligned_cols=248 Identities=25% Similarity=0.407 Sum_probs=207.0
Q ss_pred ccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccCC
Q 004732 395 FATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 473 (733)
Q Consensus 395 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 473 (733)
|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 666779999999999999954 7999999999766556667899999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccc
Q 004732 474 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 553 (733)
Q Consensus 474 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 553 (733)
|+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ....
T Consensus 127 ~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 200 (321)
T 2c30_A 127 GALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKS 200 (321)
T ss_dssp CBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCC
T ss_pred CCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-cccc
Confidence 999998854 36999999999999999999999986 99999999999999999999999999986554322 2344
Q ss_pred cccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHH
Q 004732 554 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 633 (733)
Q Consensus 554 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (733)
..||+.|+|||++.+..++.++|||||||++|||++|+.||............. ....... ........
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~ 269 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR----DSPPPKL-------KNSHKVSP 269 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH----HSSCCCC-------TTGGGSCH
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----cCCCCCc-------CccccCCH
Confidence 679999999999999999999999999999999999999997665443332211 1111000 00111223
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 634 VMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 634 ~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+.+++.+||+.||++|||+.|+++.
T Consensus 270 ~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 270 VLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 58889999999999999999999874
No 36
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.9e-43 Score=381.85 Aligned_cols=263 Identities=20% Similarity=0.245 Sum_probs=215.0
Q ss_pred hhhHHhhhcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004732 385 YLQIKAATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIE 460 (733)
Q Consensus 385 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 460 (733)
+.+++..+++|...+.||+|+||+||+|+.. +++.||||++.... ......+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4566778899999999999999999999954 57899999986421 1122348899999999999999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 461 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
++..++|||||++|+|.+++......+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876678999999999999999999999986 999999999999999999999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHh-----hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 615 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (733)
+.............+||++|+|||++. ...++.++|||||||++|||++|+.||...+..............-..
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccC
Confidence 876655544455578999999999997 456899999999999999999999999776655443322111111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRM 659 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~~vl~~ 659 (733)
. ......+ ..+.+++.+|+..+|++ ||++.|+++.
T Consensus 303 p-----~~~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 P-----TQVTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp C-----SSCCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred C-----cccccCC----HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1 1111122 34788999999888888 9999999764
No 37
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.4e-43 Score=380.61 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=211.4
Q ss_pred hhcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
..++|...+.||+|+||.||+|+.. +++.||||.+.... ......|.+|++++++++|||||+++++|.+++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 4567888999999999999999964 78999999987542 333457889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+++|+|.+++......+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876667999999999999999999999996 99999999999999999999999999986443222
Q ss_pred ccc-cccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 549 HIS-TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 549 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+..... ...
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~-----~~~ 339 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV----EKGGRLPC-----PEL 339 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH----HTTCCCCC-----CTT
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCCC-----CCC
Confidence 111 12335778999999999999999999999999999998 99999765544333221 12211111 111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
. ...+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 340 ~----~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 340 C----PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 2 23488899999999999999999999999854
No 38
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.1e-42 Score=364.68 Aligned_cols=260 Identities=20% Similarity=0.230 Sum_probs=210.8
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+ ..+|+.||||.+..... ...+.+|+++++++ +||||+++++++.+++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 4678899999999999999999 46789999999865432 24688999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC-----eEEcccCccccCc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-----SKISDFGLAKLDE 544 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~-----~kl~DfGla~~~~ 544 (733)
|+ +++|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999876678999999999999999999999996 999999999999998887 9999999998654
Q ss_pred ccCcc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHH---HhhCcc
Q 004732 545 EENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL---KEQGKL 615 (733)
Q Consensus 545 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~ 615 (733)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 43221 124567999999999999999999999999999999999999999654322222211111 111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
.... ..+ . .+.+++..||+.+|.+||++.+|++.|+......
T Consensus 242 ~~~~-----~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 242 EVLC-----ENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHT-----TTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHh-----ccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0000 001 1 5889999999999999999999999998654433
No 39
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-42 Score=385.34 Aligned_cols=261 Identities=28% Similarity=0.420 Sum_probs=215.6
Q ss_pred HhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
....++|...+.||+|+||.||+|++.++..||||.++... ...+.|.+|++++++++|||||++++++. ++..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 44567888999999999999999998888999999997643 34678999999999999999999999986 66789999
Q ss_pred EccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 469 EYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
||+++|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999999999743 347899999999999999999999986 9999999999999999999999999998765433
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
........+|+.|+|||.+....++.++|||||||++|||++ |+.||............ ..+..... ...
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i----~~~~~~~~-----~~~ 409 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL----ERGYRMPR-----PEN 409 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH----HHTCCCCC-----CTT
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCCC-----CCC
Confidence 222334457889999999999999999999999999999999 99999766544433221 11111111 111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
+ ...+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 410 ~----~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 410 C----PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred C----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 2 235889999999999999999999999999765543
No 40
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.8e-43 Score=366.43 Aligned_cols=262 Identities=26% Similarity=0.389 Sum_probs=207.2
Q ss_pred hcCccccCcccCCCcccEEEccc-----CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 464 (733)
.++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 45778889999999999999973 36889999999877666667899999999999999999999998654 558
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999877767999999999999999999999986 9999999999999999999999999998765
Q ss_pred ccCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhH------------HHHHHHHH
Q 004732 545 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL------------LDWALVLK 610 (733)
Q Consensus 545 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~------------~~~~~~~~ 610 (733)
..... ......|+..|+|||.+.+..++.++||||||+++|||++|..|+........ ........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 43221 22334577889999999999999999999999999999999999854321100 00000011
Q ss_pred hhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 611 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.... ....+......+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 246 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111 111112223458899999999999999999999999986543
No 41
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.3e-42 Score=371.25 Aligned_cols=270 Identities=19% Similarity=0.214 Sum_probs=209.0
Q ss_pred hhcCccccCcccCCCcccEEEcccCC------CcEEEEEEccccChhc-----------HHHHHHHHHHHHhCCCCceee
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLAD------GTAIAVKQLSSKSKQG-----------NREFINEIGMISALQHPNLVK 453 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 453 (733)
..++|...+.||+|+||.||+|+... ++.||||.+....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45678899999999999999998643 4789999986543211 123445666778888999999
Q ss_pred EeeEEEeC----CeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec--
Q 004732 454 LYGCCIEG----NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-- 527 (733)
Q Consensus 454 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-- 527 (733)
+++++... ...++||||+ +++|.+++......+++..++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 99999875 4589999999 99999999877678999999999999999999999996 99999999999999
Q ss_pred CCCCeEEcccCccccCcccCccc------ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccch-h
Q 004732 528 KDLNSKISDFGLAKLDEEENTHI------STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM-F 600 (733)
Q Consensus 528 ~~~~~kl~DfGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~-~ 600 (733)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998665432221 1335699999999999999999999999999999999999999964321 1
Q ss_pred hHHHHHHHHHhhCcccccccCCCC-CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccccc
Q 004732 601 YLLDWALVLKEQGKLMELVDTNPG-SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVLDL 669 (733)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~~ 669 (733)
....+.... ....+..+++.... ...+ ..+.+++..||+.+|.+||++.+|++.|+........
T Consensus 269 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 269 KYVRDSKIR-YRENIASLMDKCFPAANAP----GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHH-HHHCHHHHHHHHSCTTCCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-hhhhHHHHHHHhcccccCH----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 222212111 11223333333221 1222 3488899999999999999999999999876655443
No 42
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5e-43 Score=371.10 Aligned_cols=264 Identities=27% Similarity=0.335 Sum_probs=204.4
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC----eEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN----QLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV 467 (733)
.++|...+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.++. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 457888899999999999999865 7999999986543 23345667899999999999999999998743 47999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE-------SRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
|||+++|+|.+++... .+++..+..++.|+++||+|||+. ...+|+||||||+|||++.++.+||+|||++
T Consensus 101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 9999999999999754 589999999999999999999987 0113999999999999999999999999999
Q ss_pred ccCcccCcc-cccccccCCCcccHHHHhhC-----CCCccchhHhHHHHHHHHHhCCCCCCccchhh-------------
Q 004732 541 KLDEEENTH-ISTRVAGTIGYMAPEYAMRG-----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFY------------- 601 (733)
Q Consensus 541 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~------------- 601 (733)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 765543322 23346799999999999863 45678899999999999999999995432111
Q ss_pred HHHHHHHHHhhCcccccccCCCCCC-CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 602 LLDWALVLKEQGKLMELVDTNPGSN-FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
...+.......... +..... ........+.+++.+||+.||++|||+.||++.|+++.
T Consensus 259 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 259 LEDMQEVVVHKKKR-----PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHHHHHHTTSCCC-----CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCC-----CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111111111 111110 12234556899999999999999999999999998643
No 43
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=363.77 Aligned_cols=252 Identities=17% Similarity=0.257 Sum_probs=208.7
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||.||+|+. .+++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46788999999999999999994 568899999987543 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC--CCCeEEcccCccccCcccCc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK--DLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~--~~~~kl~DfGla~~~~~~~~ 548 (733)
+++|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999776668999999999999999999999996 999999999999987 78999999999987654322
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............. ... .. .+......
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~-~~--~~~~~~~~-- 229 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM---NAE-YT--FDEEAFKE-- 229 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTC-CC--CCHHHHTT--
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---cCC-CC--CChhhhcc--
Confidence 234679999999999998889999999999999999999999997665544332211 111 00 00000001
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+.+++.+|++.||.+|||+.|+++.
T Consensus 230 --~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 230 --ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12358899999999999999999999874
No 44
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=374.67 Aligned_cols=259 Identities=28% Similarity=0.414 Sum_probs=210.8
Q ss_pred hcCccccCcccCCCcccEEEcccC------CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
.++|...+.||+|+||+||+|++. +++.||||++... .......+.+|+.++++++|||||++++++.++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457888899999999999999843 4678999999654 344556789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC---CeEEc
Q 004732 465 LLIYEYLENNSLARALFEHR------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKIS 535 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~ 535 (733)
++||||+++|+|.+++.... ..+++.+++.++.||++||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997543 45899999999999999999999996 99999999999999555 59999
Q ss_pred ccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhC
Q 004732 536 DFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 536 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i----~~~ 302 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV----TSG 302 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH----HTT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcC
Confidence 9999975433222 22334568999999999999999999999999999999998 99999766554443322 111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
.... ..... ...+.+++.+||+.||.+||++.+|++.|+.....
T Consensus 303 ~~~~-----~~~~~----~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 GRMD-----PPKNC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCC-----CCccC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1111 11122 23488999999999999999999999999865443
No 45
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-42 Score=387.80 Aligned_cols=259 Identities=25% Similarity=0.420 Sum_probs=215.6
Q ss_pred HhhhcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
+....+|...+.||+|+||.||+|++. ++..||||.+.... ...+.|.+|++++++++|||||+++++|.+++..++|
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 344567888999999999999999965 48899999997643 3467899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 468 YEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
|||+++|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999999853 456899999999999999999999986 999999999999999999999999999876544
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.........+++.|+|||.+....++.++|||||||++|||++ |+.||...+........ ..+....
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~-------- 439 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL----EKDYRME-------- 439 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH----HTTCCCC--------
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCC--------
Confidence 3333344557889999999999999999999999999999999 99999765544433221 1111111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.+......+.+++.+||+.||.+|||+.+|++.|+...
T Consensus 440 -~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11112245889999999999999999999999999654
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-41 Score=355.51 Aligned_cols=261 Identities=20% Similarity=0.255 Sum_probs=211.8
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+ ..+|+.||||.+..... ...+.+|+++++.+ +|+|++++++++.++...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 4578899999999999999999 46799999999865432 24678899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC-----eEEcccCccccCc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-----SKISDFGLAKLDE 544 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~-----~kl~DfGla~~~~ 544 (733)
|+ +++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877778999999999999999999999986 999999999999987776 9999999998665
Q ss_pred ccCcc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccch---hhHHHHHHHHHhhCcc
Q 004732 545 EENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM---FYLLDWALVLKEQGKL 615 (733)
Q Consensus 545 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~ 615 (733)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ................
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 43221 23456799999999999999999999999999999999999999965322 1111111111111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
.... ..++ ..+.+++.+||+.||++||++.+|++.|+.+....
T Consensus 243 ~~~~-----~~~~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 243 RELC-----AGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHT-----TTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHH-----hhCc----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1111 1122 34889999999999999999999999999765544
No 47
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=375.86 Aligned_cols=262 Identities=20% Similarity=0.227 Sum_probs=212.4
Q ss_pred hhhHHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004732 385 YLQIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIE 460 (733)
Q Consensus 385 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 460 (733)
+.+.+...++|...+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+|..++..++||||++++++|.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 445667789999999999999999999995 579999999986431 1223457889999999999999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 461 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
++..++||||+++|+|.+++...+..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876668999999999999999999999986 999999999999999999999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhh-------CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMR-------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
+.............+||+.|+|||++.. ..++.++|||||||++|||++|+.||...+...............
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc
Confidence 8766544444445789999999999973 568999999999999999999999997765544332221111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCC---CCHHHHHHH
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIR---PSMSSVLRM 659 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R---Pt~~~vl~~ 659 (733)
.. +...... ...+.+++.+|++ +|.+| |++.|+++.
T Consensus 290 ~~-----p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SL-----PLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC-----C----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CC-----CccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11 1001122 2348899999999 99998 589998653
No 48
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.8e-42 Score=367.63 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=203.0
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCc----EEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGT----AIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.++|+..+.||+|+||+||+|+. .+++ +||+|.+... .....+.|.+|++++++++||||++++++|.++. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 35678889999999999999984 4454 3688887543 3345678999999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+|+||+.+|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999887778999999999999999999999996 99999999999999999999999999986544
Q ss_pred cCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 546 ENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 546 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~----~~~~~~------- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----EKGERL------- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCCC-------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH----HcCCCC-------
Confidence 3322 2334557889999999999999999999999999999999 99999665544433221 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
..+......+.+++.+||+.+|.+||++.++++.|+...
T Consensus 239 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 239 --PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp --CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred --CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111122335889999999999999999999999988543
No 49
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-41 Score=365.95 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=210.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||.||+|+. .+|+.||+|.+..........+.+|+++++.++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46788999999999999999984 57899999999766555567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC--CCCeEEcccCccccCcccCc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK--DLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~--~~~~kl~DfGla~~~~~~~~ 548 (733)
+++|+|.+++......+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999766668999999999999999999999986 999999999999974 46799999999987654322
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... ... .. .+.......
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~---~~~-~~--~~~~~~~~~- 277 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK---RCD-WE--FDEDAFSSV- 277 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---HCC-CC--CCSSTTTTS-
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC-CC--CCccccccC-
Confidence 233579999999999999899999999999999999999999997765443332211 111 00 111111122
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+.+++.+||+.||++|||+.|+++.
T Consensus 278 ---s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 278 ---SPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 2348899999999999999999999874
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.1e-42 Score=360.82 Aligned_cols=262 Identities=24% Similarity=0.333 Sum_probs=204.7
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||+||+|+..+|+.||||++.... ......+.+|++++++++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788889999999999999998889999999986542 2224678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++ +|.+.+......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 888888777777999999999999999999999996 99999999999999999999999999986543322
Q ss_pred cccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccc----------
Q 004732 550 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMEL---------- 618 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 618 (733)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........................
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh
Confidence 2234578999999999976 56899999999999999999999999655444433322221111110000
Q ss_pred ------ccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 619 ------VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 619 ------~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
................+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000000111235789999999999999999999987
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-42 Score=366.86 Aligned_cols=263 Identities=29% Similarity=0.462 Sum_probs=215.2
Q ss_pred hHHhhhcCccccCcccCCCcccEEEcccC------CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEE
Q 004732 387 QIKAATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCI 459 (733)
Q Consensus 387 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 459 (733)
.+....++|...+.||+|+||.||+|+.. +++.||||.+... .....+.+.+|++++++++||||++++++|.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34456688999999999999999999853 4588999999764 3334567999999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeec
Q 004732 460 EGNQLLLIYEYLENNSLARALFEHR-----------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVH 516 (733)
Q Consensus 460 ~~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 516 (733)
+++..++||||+++|+|.+++.... ..+++.+++.++.||++||+|||+.+ |+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 9999999999999999999997532 57999999999999999999999996 999
Q ss_pred CCCCCCcEEecCCCCeEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCC
Q 004732 517 RDIKATNVLLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNV 594 (733)
Q Consensus 517 ~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~ 594 (733)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999976543322 22334568899999999999999999999999999999999 99999
Q ss_pred CccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 595 TKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
............ ..+..... ...+ ...+.+++.+||+.||++||++.++++.|+++.+
T Consensus 278 ~~~~~~~~~~~~----~~~~~~~~-----~~~~----~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 278 YGMAHEEVIYYV----RDGNILAC-----PENC----PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp TTSCHHHHHHHH----HTTCCCCC-----CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCCChHHHHHHH----hCCCcCCC-----CCCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 765544333221 12221111 1122 2358899999999999999999999999997655
No 52
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.1e-42 Score=363.05 Aligned_cols=249 Identities=26% Similarity=0.312 Sum_probs=206.8
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||+||+|+. .+|+.||||.+... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 35788899999999999999994 57899999998653 233456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998754 47899999999999999999999996 9999999999999999999999999998543222
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ... ......
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~~-~~~------~~p~~~ 228 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI---LM-EEI------RFPRTL 228 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH-CCC------CCCTTS
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH---Hc-CCC------CCCCCC
Confidence 2234567999999999999989999999999999999999999999766544333211 11 111 011112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRP-----SMSSVLRM 659 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~~ 659 (733)
...+.+++.+||+.||++|| ++.|+++.
T Consensus 229 ----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 229 ----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 23588999999999999999 89998653
No 53
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.2e-42 Score=381.77 Aligned_cols=261 Identities=29% Similarity=0.449 Sum_probs=209.0
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
...++|...+.||+|+||.||+|++.++..||||.+.... ...+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3456788899999999999999998888889999997643 345789999999999999999999999876 67899999
Q ss_pred ccCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
|+++|+|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999974 3356999999999999999999999986 99999999999999999999999999987654333
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.......+++.|+|||.+....++.++|||||||++|||++ |+.||............ ..+.... .
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i----~~~~~~~---------~ 402 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV----ERGYRMP---------C 402 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH----HTTCCCC---------C
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCC---------C
Confidence 33334557889999999999999999999999999999999 99999765544333221 1121111 1
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccccc
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVLD 668 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~ 668 (733)
+......+.+++.+||+.||++|||+.+|++.|+.+....+
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 11223458899999999999999999999999997765443
No 54
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.4e-42 Score=374.71 Aligned_cols=259 Identities=20% Similarity=0.276 Sum_probs=212.2
Q ss_pred hhHHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004732 386 LQIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEG 461 (733)
Q Consensus 386 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 461 (733)
.+++...++|...+.||+|+||+||+|+. .+++.||+|++.... ......+.+|+.+++.++|||||+++++|.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 45666788999999999999999999995 468999999986421 12224578999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 462 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
+..++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999998653 6899999999999999999999996 9999999999999999999999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCC----CCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccc
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGH----LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME 617 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 617 (733)
.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+..............-.
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--- 293 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT--- 293 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC---
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccccc---
Confidence 76655444445678999999999998755 78999999999999999999999977665444332211111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 004732 618 LVDTNPGSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRM 659 (733)
Q Consensus 618 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~~vl~~ 659 (733)
... ....+ ..+.+++.+|++.+|.+ ||++.||++.
T Consensus 294 ~p~---~~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 FPD---DNDIS----KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCT---TCCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCC---ccccc----HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 100 11222 34888999999999988 9999999864
No 55
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.9e-42 Score=355.06 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=198.6
Q ss_pred hhcCccccCcccCCCcccEEEcccC----CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
..++|...+.||+|+||.||+|+.. .+..||+|.+... .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3457888899999999999999853 2457999998654 3334567899999999999999999999984 56789
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999877778999999999999999999999986 99999999999999999999999999987655
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
..........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+.... ..
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i----~~~~~~~-----~~ 239 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----ENGERLP-----MP 239 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCCCC-----CC
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH----HcCCCCC-----CC
Confidence 44333344567889999999999999999999999999999997 99999665544433221 1111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
... ...+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 240 ~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 240 PNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 122 235888999999999999999999999998543
No 56
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6e-42 Score=352.50 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=213.4
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccC
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 472 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 472 (733)
++|...+.||+|+||.||+|+..+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 5678889999999999999998888999999997643 234689999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccccc
Q 004732 473 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 552 (733)
Q Consensus 473 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 552 (733)
+++|.+++......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...........
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999877678999999999999999999999996 999999999999999999999999999866543333333
Q ss_pred ccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHH
Q 004732 553 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 631 (733)
Q Consensus 553 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (733)
...|++.|+|||.+.+..++.++||||||+++|||++ |+.||............ . .+.. .......
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i---~-~~~~-----~~~~~~~---- 230 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI---S-TGFR-----LYKPRLA---- 230 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H-TTCC-----CCCCTTS----
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH---h-cCCc-----CCCCccC----
Confidence 4567889999999999999999999999999999999 89999765544333211 1 1111 0011112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 632 VMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 632 ~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
...+.+++.+||+.+|++||++.++++.|+++.
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 234888999999999999999999999998643
No 57
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-41 Score=364.34 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=206.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChh------cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ------GNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
.+.|...+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 45788999999999999999994 57899999998654221 346789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC----CeEEcccCcc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL----NSKISDFGLA 540 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~----~~kl~DfGla 540 (733)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999654 47999999999999999999999986 99999999999998877 7999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccccc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 620 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... . ... . .+
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~---~-~~~-~-~~ 238 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT---A-VSY-D-FD 238 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---T-TCC-C-CC
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-cCC-C-CC
Confidence 8665432 2244679999999999999899999999999999999999999997765544332111 1 100 0 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 621 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 621 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...... ....+.+++.+|+..||.+|||+.|+++.
T Consensus 239 ~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 239 EEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000011 12358899999999999999999999863
No 58
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-41 Score=357.79 Aligned_cols=262 Identities=26% Similarity=0.405 Sum_probs=204.4
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
..++|...+.||+|+||.||+|+.. ..+|+|.++.. .....+.|.+|++++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3467888999999999999999864 35899988653 3344567899999999999999999999865 55689999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc-C
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE-N 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~-~ 547 (733)
||+++|+|.+++......+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877778999999999999999999999996 999999999999999999999999999865432 2
Q ss_pred cccccccccCCCcccHHHHh---hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
........||+.|+|||.+. +..++.++|||||||++|||++|+.||............ ...+....... ...
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~~~~~~-~~~ 263 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRGYASPDLS-KLY 263 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHHTCCCCCST-TSC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHH---HhcCCCCcchh-hhh
Confidence 22234467999999999997 567899999999999999999999999654433222111 11111111110 011
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
..+ ...+.+++.+||+.+|++||++.||++.|+.....
T Consensus 264 ~~~----~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 264 KNC----PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp SSS----CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cCC----cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 122 23588999999999999999999999999865443
No 59
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=365.93 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=201.2
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 465 (733)
..++|...+.||+|+||+||+|+. .+|+.||||++... .......+.+|.++++.+ +||||+++++++.+++..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 346888999999999999999994 57899999998653 223446688899999988 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999754 47999999999999999999999996 99999999999999999999999999985332
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... . +..
T Consensus 177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~-~~~---------- 241 (353)
T 3txo_A 177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---N-DEV---------- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCC----------
T ss_pred CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH---c-CCC----------
Confidence 22 22345689999999999999899999999999999999999999997766544432211 1 111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCH------HHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSM------SSVLR 658 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~------~~vl~ 658 (733)
.++......+.+++.+|++.||.+||++ .|+++
T Consensus 242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0111122347889999999999999998 66654
No 60
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.2e-42 Score=370.69 Aligned_cols=262 Identities=26% Similarity=0.380 Sum_probs=209.7
Q ss_pred HHhhhcCccccCcccCCCcccEEEcc------cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhC-CCCceeeEeeEEE
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGL------LADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCI 459 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 459 (733)
.....++|...+.||+|+||.||+|+ ..+++.||||++.... ....+.+.+|+++++++ +|||||+++++|.
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 34556789999999999999999996 3456899999997643 33456799999999999 7999999999998
Q ss_pred eCC-eEEEEEEccCCCCHHHHHHhcCC-----------------------------------------------------
Q 004732 460 EGN-QLLLIYEYLENNSLARALFEHRL----------------------------------------------------- 485 (733)
Q Consensus 460 ~~~-~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------- 485 (733)
+.+ ..++||||+++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 765 48999999999999999975432
Q ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc-cccc
Q 004732 486 ------------KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT-HIST 552 (733)
Q Consensus 486 ------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~ 552 (733)
.+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 253 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcc
Confidence 2899999999999999999999996 99999999999999999999999999986543322 2334
Q ss_pred ccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHH
Q 004732 553 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 631 (733)
Q Consensus 553 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (733)
...||+.|+|||++.+..++.++|||||||++|||++ |+.||.......... ... ..+..... ....+
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~--~~~-~~~~~~~~-----~~~~~--- 322 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--RRL-KEGTRMRA-----PDYTT--- 322 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH--HHH-HHTCCCCC-----CTTCC---
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH--HHH-HcCCCCCC-----CCCCC---
Confidence 5678999999999999999999999999999999998 999996543222111 111 11111111 11122
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 632 VMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 632 ~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
..+.+++.+||+.||.+|||+.|+++.|++..
T Consensus 323 -~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 323 -PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp -HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 34888999999999999999999999998643
No 61
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-42 Score=370.57 Aligned_cols=262 Identities=29% Similarity=0.430 Sum_probs=214.5
Q ss_pred hhhcCccccCcccCCCcccEEEccc--------CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL--------ADGTAIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCI 459 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 459 (733)
...++|...+.||+|+||.||+|+. ..+..||||++... .......+.+|+++++++ +|||||+++++|.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 3456788899999999999999974 23467999998764 334457789999999999 9999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcE
Q 004732 460 EGNQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNV 524 (733)
Q Consensus 460 ~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Ni 524 (733)
+++..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceE
Confidence 9999999999999999999998543 35999999999999999999999996 99999999999
Q ss_pred EecCCCCeEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhH
Q 004732 525 LLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYL 602 (733)
Q Consensus 525 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~ 602 (733)
|++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999986654332 22334567889999999999999999999999999999999 9999976654443
Q ss_pred HHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 603 LDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
.... ..+..... .... ...+.+++.+||+.||++||++.||++.|+++....
T Consensus 303 ~~~~----~~~~~~~~-----~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 303 FKLL----KEGHRMDK-----PSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHH----HTTCCCCC-----CSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHH----HcCCCCCC-----CccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 3222 11111111 1122 234889999999999999999999999999766544
No 62
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.9e-42 Score=352.11 Aligned_cols=253 Identities=28% Similarity=0.458 Sum_probs=197.3
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccCh----hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK----QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+.. |+.||||.+..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457888999999999999999875 88999999865422 2346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC--------CCCeEEcccCc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK--------DLNSKISDFGL 539 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~--------~~~~kl~DfGl 539 (733)
|||+++++|.+++. ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++. ++.+||+|||+
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999999885 347999999999999999999999986555999999999999986 67899999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccc
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 619 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (733)
++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+........ .......
T Consensus 163 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~--- 233 (271)
T 3dtc_A 163 AREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV---AMNKLAL--- 233 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH---HTSCCCC---
T ss_pred ccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh---hcCCCCC---
Confidence 986543322 2456899999999999999999999999999999999999999765443322111 1111111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004732 620 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 662 (733)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 662 (733)
...... ...+.+++.+||+.||.+|||+.|+++.|+.
T Consensus 234 --~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 234 --PIPSTC----PEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp --CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred --CCCccc----CHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111122 2358899999999999999999999999874
No 63
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-41 Score=354.53 Aligned_cols=262 Identities=27% Similarity=0.356 Sum_probs=203.1
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccCh--hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
++|...+.||+|+||+||+|+..+|+.||||++..... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788899999999999999988899999999865432 2236788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
+++ +|.+++......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 986 899998876678999999999999999999999996 99999999999999999999999999976543221 2
Q ss_pred ccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc------ccc--ccC
Q 004732 551 STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL------MEL--VDT 621 (733)
Q Consensus 551 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~ 621 (733)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||..................... .+. .++
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence 2345689999999999764 5899999999999999999999999765544333222211111000 000 000
Q ss_pred CCC-------CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 NPG-------SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ~~~-------~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00011123457899999999999999999999763
No 64
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=358.60 Aligned_cols=252 Identities=23% Similarity=0.298 Sum_probs=206.1
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh------hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++.++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35678889999999999999994 5789999999865422 1357899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC----CeEEcccCcc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL----NSKISDFGLA 540 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~----~~kl~DfGla 540 (733)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999999643 57999999999999999999999986 99999999999999887 7999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccccc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 620 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............. ..........
T Consensus 166 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~- 240 (326)
T 2y0a_A 166 HKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNYEFEDEY- 240 (326)
T ss_dssp EECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--HTCCCCCHHH-
T ss_pred eECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH--hcCCCcCccc-
Confidence 86643322 234679999999999998899999999999999999999999997655443332111 0000000000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 621 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 621 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
... ....+.+++.+||+.||++|||+.|+++.
T Consensus 241 ---~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 241 ---FSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ---HTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccc----CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001 12347899999999999999999999874
No 65
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=365.73 Aligned_cols=248 Identities=24% Similarity=0.312 Sum_probs=200.8
Q ss_pred ccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccCCCC
Q 004732 397 TDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNS 475 (733)
Q Consensus 397 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 475 (733)
..+.||+|+||.||+|+ ..+|+.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 35689999999999998 46799999999987665666789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe--cCCCCeEEcccCccccCcccCcccccc
Q 004732 476 LARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL--DKDLNSKISDFGLAKLDEEENTHISTR 553 (733)
Q Consensus 476 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill--~~~~~~kl~DfGla~~~~~~~~~~~~~ 553 (733)
|.+++......+++..+..++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....... ...
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~ 247 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV 247 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence 99999877678999999999999999999999996 9999999999999 5677899999999987654332 234
Q ss_pred cccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHH
Q 004732 554 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 633 (733)
Q Consensus 554 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (733)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ ...... ... .....+ ..
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i---~~~~~~--~~~-~~~~~~----~~ 317 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI---LACRWD--LED-EEFQDI----SE 317 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCCC--SCS-GGGTTS----CH
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhccCC--CCh-hhhccC----CH
Confidence 56999999999999888999999999999999999999999766544332211 111110 000 000112 23
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 634 VMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 634 ~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+.+++.+|++.||.+||++.|+++.
T Consensus 318 ~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 318 EAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 58899999999999999999999873
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=353.65 Aligned_cols=265 Identities=19% Similarity=0.241 Sum_probs=209.8
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC--eEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGN--QLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 467 (733)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 35678889999999999999995 468999999987543 334577889999999999999999999998765 78999
Q ss_pred EEccCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe----cCCCCeEEcccCccc
Q 004732 468 YEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL----DKDLNSKISDFGLAK 541 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill----~~~~~~kl~DfGla~ 541 (733)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999997533 34999999999999999999999996 9999999999999 788889999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHh--------hCCCCccchhHhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhh
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAM--------RGHLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQ 612 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~-~~~~~~~~~~~~~ 612 (733)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... .............
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 6654332 23457999999999987 46789999999999999999999999943221 1111111111111
Q ss_pred Cc---ccccc-----------cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004732 613 GK---LMELV-----------DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 661 (733)
Q Consensus 613 ~~---~~~~~-----------~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~ 661 (733)
.. ..... ...............+.+++.+|++.||++|||+.|+++...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 11 00000 011122445677778999999999999999999999998876
No 67
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.5e-42 Score=355.58 Aligned_cols=261 Identities=24% Similarity=0.412 Sum_probs=217.2
Q ss_pred hHHhhhcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 387 QIKAATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 387 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
+.....++|...+.||+|+||.||+|+.. ++..||||.+.... ...+.+.+|++++++++||||+++++++.+++..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 33456678899999999999999999954 58899999987543 34578899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 466 LIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999999753 456999999999999999999999986 9999999999999999999999999998766
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
...........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||...+......... ..... ..
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~----~~~~~-----~~ 233 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYRM-----ER 233 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH----TTCCC-----CC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh----ccCCC-----CC
Confidence 554444455667889999999999999999999999999999999 999996655444332211 11111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.... ...+.+++.+|++.||.+||++.++++.|+...
T Consensus 234 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 234 PEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1122 245889999999999999999999999998543
No 68
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.9e-41 Score=355.27 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=201.1
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHh--CCCCceeeEeeEEEeC----CeE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISA--LQHPNLVKLYGCCIEG----NQL 464 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~ 464 (733)
..++|...+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.+. ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 346788999999999999999987 6899999998643 34566777777776 7999999999997653 458
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeecCCCCCCcEEecCCCCeEEcc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLH--------GESRIKVVHRDIKATNVLLDKDLNSKISD 536 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dik~~Nill~~~~~~kl~D 536 (733)
++||||+++|+|.+++.. ..+++..+++++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 999999999999999953 47999999999999999999999 664 99999999999999999999999
Q ss_pred cCccccCcccCccc---ccccccCCCcccHHHHhhC------CCCccchhHhHHHHHHHHHhC----------CCCCCcc
Q 004732 537 FGLAKLDEEENTHI---STRVAGTIGYMAPEYAMRG------HLTEKADVYSFGIVALEIVSG----------RSNVTKE 597 (733)
Q Consensus 537 fGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~elltg----------~~p~~~~ 597 (733)
||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654433221 2335799999999999876 455799999999999999999 8888432
Q ss_pred ch--hhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004732 598 DM--FYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 662 (733)
Q Consensus 598 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 662 (733)
.. ................... +...........+.+++.+||+.||++|||+.||++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 237 VPNDPSFEDMRKVVCVDQQRPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcchhhhhHHHhccCCCCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 11 1111111111111111111 1111233456679999999999999999999999999984
No 69
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.8e-42 Score=366.22 Aligned_cols=270 Identities=28% Similarity=0.385 Sum_probs=211.9
Q ss_pred cCccccCcccCCCcccEEEccc-----CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEE--eCCeEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCI--EGNQLL 465 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 465 (733)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5678889999999999999983 468899999998776666678999999999999999999999987 456789
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++++|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876667999999999999999999999986 99999999999999999999999999987654
Q ss_pred cCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHH--HHHHhhCcccccccC
Q 004732 546 ENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWA--LVLKEQGKLMELVDT 621 (733)
Q Consensus 546 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 621 (733)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..........+. ..........+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 3322 233456888999999999999999999999999999999999998544322111000 000000000011111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
......+......+.+++.+||+.||++|||+.|+++.|+....
T Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11111122233458899999999999999999999999986544
No 70
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-41 Score=363.44 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=206.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45788899999999999999984 57899999998654 2334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC---CeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~DfGla~~~~~ 545 (733)
||+++|+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998654 47899999999999999999999996 99999999999998654 599999999986654
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... . +... ... .
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~---~-~~~~-~~~--~-- 252 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK---A-GAYD-YPS--P-- 252 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-TCCC-CCT--T--
T ss_pred Ccc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---h-CCCC-CCc--c--
Confidence 322 234679999999999999899999999999999999999999997765544332221 1 1110 000 0
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
........+.+++.+||+.||++||++.|+++.
T Consensus 253 -~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 -EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001122358899999999999999999999764
No 71
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-41 Score=360.55 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=204.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcE----EEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTA----IAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.++|...+.||+|+||+||+|+. .+++. ||+|.+.... ......+.+|+.++++++||||++++++|. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35788889999999999999984 44554 7888775432 223356788999999999999999999986 56689
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+.+|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999876668999999999999999999999996 99999999999999999999999999987654
Q ss_pred cCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 546 ENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 546 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~-- 241 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL----EKGERLAQPQI-- 241 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH----HTTCBCCCCTT--
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH----HcCCCCCCCCc--
Confidence 4332 2344668889999999999999999999999999999999 99999765444333221 11111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
....+.+++.+||+.||.+||++.++++.|+...
T Consensus 242 -------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 242 -------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp -------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred -------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1113778999999999999999999999998543
No 72
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=371.18 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=206.8
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
..++|...+.||+|+||.||+|+ ..+|+.||+|.+.... ....+.+.+|+++++.++|||||++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 35678889999999999999998 5678999999986543 23346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec---CCCCeEEcccCccccCc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD---KDLNSKISDFGLAKLDE 544 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~---~~~~~kl~DfGla~~~~ 544 (733)
|||+++|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999999765 47999999999999999999999996 99999999999998 45789999999998665
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+......... .+.. .... ...
T Consensus 165 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~----~~~~-~~~~-~~~ 237 (444)
T 3soa_A 165 GEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK----AGAY-DFPS-PEW 237 (444)
T ss_dssp TTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH----HTCC-CCCT-TTT
T ss_pred CCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHH----hCCC-CCCc-ccc
Confidence 4322 2234679999999999999899999999999999999999999997766544433221 1111 0000 011
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
... ...+.+++.+|++.||.+|||+.|+++.
T Consensus 238 ~~~----s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 DTV----TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 122 2348899999999999999999999874
No 73
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-41 Score=353.99 Aligned_cols=245 Identities=24% Similarity=0.375 Sum_probs=204.7
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35788889999999999999994 579999999986531 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999999754 47999999999999999999999986 999999999999999999999999999865432
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ . . ... . ....+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i--~-~-~~~-~-----~p~~~ 226 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI--L-N-AEL-R-----FPPFF 226 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--H-H-CCC-C-----CCTTS
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--H-h-CCC-C-----CCCCC
Confidence 23467999999999999999999999999999999999999999766544332211 1 1 110 0 11112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRP-----SMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 658 (733)
...+.+++.+|++.||++|| ++.|+++
T Consensus 227 ----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 ----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 23488999999999999999 8888864
No 74
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.6e-41 Score=361.72 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=205.1
Q ss_pred HhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCe
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 463 (733)
+...++|...+.||+|+||.||+|+. .+|+.||||.+.... ......+..|.+++..+ +||||+++++++.+++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 34567899999999999999999995 578999999986531 23456678899999877 99999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999999754 47999999999999999999999996 999999999999999999999999999854
Q ss_pred cccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... . ... ..
T Consensus 169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~-~~~------~~ 237 (345)
T 1xjd_A 169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---M-DNP------FY 237 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCC------CC
T ss_pred ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---h-CCC------CC
Confidence 3222 22345789999999999999999999999999999999999999997765544332211 1 110 01
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMS-SVL 657 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~-~vl 657 (733)
.... ...+.+++.+|++.||++||++. +|.
T Consensus 238 p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PRWL----EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred Cccc----CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1112 23588999999999999999997 654
No 75
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.9e-41 Score=349.12 Aligned_cols=262 Identities=21% Similarity=0.299 Sum_probs=203.3
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
++|...+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4688889999999999999994 578999999986542 3334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++ ++.+.+......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9986 566666666678999999999999999999999996 99999999999999999999999999986543322
Q ss_pred cccccccCCCcccHHHHhhCC-CCccchhHhHHHHHHHHHhCCCCCC-ccchhhHHHHHHHHHhhCc---c---cccccC
Q 004732 550 ISTRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSGRSNVT-KEDMFYLLDWALVLKEQGK---L---MELVDT 621 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~elltg~~p~~-~~~~~~~~~~~~~~~~~~~---~---~~~~~~ 621 (733)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.|+. ..+................ . ....+.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 233457899999999998765 8999999999999999999998863 3333332222211111100 0 000000
Q ss_pred C---------CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 N---------PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ~---------~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ............+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0001111233457899999999999999999999863
No 76
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-41 Score=361.19 Aligned_cols=264 Identities=24% Similarity=0.410 Sum_probs=198.2
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccCC-Cc---EEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLAD-GT---AIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG 461 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 461 (733)
.....++|...+.||+|+||.||+|+... +. .||||.+... .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 34556789999999999999999998543 32 7999998754 334457899999999999999999999999887
Q ss_pred CeE------EEEEEccCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC
Q 004732 462 NQL------LLIYEYLENNSLARALFEHR-----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL 530 (733)
Q Consensus 462 ~~~------~lV~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~ 530 (733)
... ++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCC
Confidence 665 99999999999999996322 26899999999999999999999996 99999999999999999
Q ss_pred CeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHH
Q 004732 531 NSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALV 608 (733)
Q Consensus 531 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~ 608 (733)
.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...+........
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-- 252 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL-- 252 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH--
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH--
Confidence 9999999999865443222 2234557889999999999999999999999999999999 89999765544433221
Q ss_pred HHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 609 LKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
.. +.... .+......+.+++.+||+.||++|||+.++++.|+++....
T Consensus 253 -~~-~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 253 -IG-GNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -HT-TCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -hc-CCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11 11110 11112245889999999999999999999999999766544
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-41 Score=376.21 Aligned_cols=252 Identities=29% Similarity=0.430 Sum_probs=207.2
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-eEEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN-QLLLIY 468 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~ 468 (733)
...++|...+.||+|+||.||+|.+. |+.||||.++... ..+.|.+|++++++++|||||++++++.+.+ ..++||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 34567888999999999999999875 7899999997643 3478999999999999999999999988765 799999
Q ss_pred EccCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 469 EYLENNSLARALFEHRL-KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
||+++|+|.+++..... .+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 99999999999986543 4799999999999999999999996 999999999999999999999999999854322
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+...... ..
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i----~~~~~~~~p-----~~ 410 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----EKGYKMDAP-----DG 410 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH----HTTCCCCCC-----TT
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCCCC-----Cc
Confidence 122357889999999999999999999999999999998 99999665444333211 122111111 11
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
+ ...+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 411 ~----~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 411 C----PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2 235889999999999999999999999998643
No 78
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.6e-41 Score=353.50 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=191.4
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 45788999999999999999984 578999999986543 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 470 YLENNSLARALFEHR-----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
|++ |+|.+++.... ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999887432 46899999999999999999999986 9999999999999999999999999998654
Q ss_pred ccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc---ccc---
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK---LME--- 617 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~--- 617 (733)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...+................ ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 3322 22345789999999999764 689999999999999999999999976655444332222111100 000
Q ss_pred cc--cCCC----CCCC--------CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 618 LV--DTNP----GSNF--------DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 618 ~~--~~~~----~~~~--------~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.. .+.. .... .......+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 0000 0000 0011235889999999999999999999875
No 79
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.4e-42 Score=361.21 Aligned_cols=251 Identities=30% Similarity=0.451 Sum_probs=201.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46788999999999999999984 478999999986542 2234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc-
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT- 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~- 548 (733)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999988543 46999999999999999999999986 99999999999999999999999999986543322
Q ss_pred ccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchh--hHHHHHHHHHhhCcccccccCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMF--YLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ....|. ...... ...
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~----~~~~~~-----~~~- 231 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKTYL-----NPW- 231 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH----TTCTTS-----TTG-
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cccccC-----Ccc-
Confidence 22345679999999999988765 77999999999999999999999654332 111111 111100 000
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
......+.+++.+||+.||++|||+.|+++.
T Consensus 232 ---~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 232 ---KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---ccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1122347889999999999999999999865
No 80
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-41 Score=359.61 Aligned_cols=258 Identities=32% Similarity=0.465 Sum_probs=211.6
Q ss_pred hhcCccccCcccCCCcccEEEccc------CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
..++|...+.||+|+||.||+|+. .+++.||||.+... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 456788899999999999999974 34588999999754 33445778999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCC
Q 004732 464 LLLIYEYLENNSLARALFEHR-----------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIK 520 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik 520 (733)
.++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 999999999999999997543 24899999999999999999999996 9999999
Q ss_pred CCcEEecCCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccc
Q 004732 521 ATNVLLDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKED 598 (733)
Q Consensus 521 ~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~ 598 (733)
|+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999866543322 2334567889999999999999999999999999999999 999996655
Q ss_pred hhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 599 MFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
........ ..+.... ....+ ...+.+++.+||+.||++||++.++++.|+++.
T Consensus 258 ~~~~~~~~----~~~~~~~-----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 PERLFNLL----KTGHRME-----RPDNC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GGGHHHHH----HTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHh----hcCCcCC-----CCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 44333221 1111111 11122 235889999999999999999999999998653
No 81
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-41 Score=350.91 Aligned_cols=258 Identities=31% Similarity=0.458 Sum_probs=211.8
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
...++|...+.||+|+||.||+|...++..||||.+.... ...+.+.+|++++++++||||+++++++. ++..++|||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 3456788999999999999999998888899999986543 34578999999999999999999999986 456899999
Q ss_pred ccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
|+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999998643 236999999999999999999999996 99999999999999999999999999987655443
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+... ......
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~----~~~~~~-----~~~~~~ 235 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRM-----VRPDNC 235 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH----HTTCCC-----CCCTTC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH----hcccCC-----CCcccc
Confidence 33344567889999999998899999999999999999999 89999665543332211 111111 111122
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
...+.+++.+|++.+|++|||+.++++.|+....
T Consensus 236 ----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 236 ----PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----cHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 2358899999999999999999999999986544
No 82
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.9e-41 Score=359.35 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=202.3
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-----hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-----KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
+.|...+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467888999999999999998 4578999999985421 1235789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC---eEEcccCcc
Q 004732 467 IYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGLA 540 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~---~kl~DfGla 540 (733)
||||+++|+|.+.+.. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988863 2346899999999999999999999996 999999999999987655 999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccccc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 620 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... . ... +... ..
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~--~-i~~-~~~~--~~ 252 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFE--G-IIK-GKYK--MN 252 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-HHH--H-HHH-TCCC--CC
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-HHH--H-HHc-CCCC--CC
Confidence 86654322 233467999999999999989999999999999999999999999764321 111 1 111 1110 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 621 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 621 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+...... ...+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PRQWSHI----SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000111 235889999999999999999999986
No 83
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=358.09 Aligned_cols=263 Identities=19% Similarity=0.242 Sum_probs=200.2
Q ss_pred hcCccccCcccCCCcccEEEcccC----CCcEEEEEEccccChh-----------cHHHHHHHHHHHHhCCCCceeeEee
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKSKQ-----------GNREFINEIGMISALQHPNLVKLYG 456 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 456 (733)
.++|...+.||+|+||.||+|+.. ++..||||.+...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357888999999999999999954 6789999998654321 1134677889999999999999999
Q ss_pred EEEe----CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC--
Q 004732 457 CCIE----GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-- 530 (733)
Q Consensus 457 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-- 530 (733)
++.+ +...++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence 9988 78899999999 999999987554 8999999999999999999999986 99999999999999887
Q ss_pred CeEEcccCccccCcccCcc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCcc--chhhH
Q 004732 531 NSKISDFGLAKLDEEENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE--DMFYL 602 (733)
Q Consensus 531 ~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~--~~~~~ 602 (733)
.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +....
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999866433211 124467999999999999999999999999999999999999999542 22212
Q ss_pred HHHHHHHHhhCcccccc-cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 603 LDWALVLKEQGKLMELV-DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
........ . .....+ .......++ ..+.+++.+||+.||++||++.+|++.|+...-
T Consensus 271 ~~~~~~~~-~-~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLL-D-ELPQSVLKWAPSGSSC----CEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHH-H-TTTHHHHHHSCTTSCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhhc-c-cccHHHHhhccccccH----HHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111 1 111111 101111222 348899999999999999999999999996543
No 84
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=363.94 Aligned_cols=262 Identities=27% Similarity=0.400 Sum_probs=209.2
Q ss_pred HhhhcCccccCcccCCCcccEEEccc------CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIE 460 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 460 (733)
....++|...+.||+|+||.||+|+. .++..||||.+.... ......+.+|+.+++++ +||||+++++++.+
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34567889999999999999999984 245689999987542 23346789999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcCC----------------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCC
Q 004732 461 GNQLLLIYEYLENNSLARALFEHRL----------------------KLDWPTRRRICLGIARGLAYLHGESRIKVVHRD 518 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D 518 (733)
++..++||||+++|+|.+++..... .+++..++.++.||++||+|||+.+ |+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCC
Confidence 9999999999999999999975432 3799999999999999999999986 99999
Q ss_pred CCCCcEEecCCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCc
Q 004732 519 IKATNVLLDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTK 596 (733)
Q Consensus 519 ik~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~ 596 (733)
|||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999866543322 2334567889999999999999999999999999999998 9999965
Q ss_pred cchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 597 EDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
........ .....+.... ..... ...+.+++.+||+.||.+||++.++++.|+....
T Consensus 278 ~~~~~~~~---~~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 278 IPVDANFY---KLIQNGFKMD-----QPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp CCCSHHHH---HHHHTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CCcHHHHH---HHHhcCCCCC-----CCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 43222111 1111111110 11112 2358889999999999999999999999986544
No 85
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.4e-41 Score=349.78 Aligned_cols=257 Identities=26% Similarity=0.376 Sum_probs=206.3
Q ss_pred hhcCccccCcccCCCcccEEEcccCC----CcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLAD----GTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
..++|...+.||+|+||.||+|+... +..||||.+... .....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45678889999999999999998432 346999998765 33445789999999999999999999999765 4568
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++++|.+++......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877677999999999999999999999986 99999999999999999999999999987655
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
..........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||............ . .+.... ..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~---~-~~~~~~-----~~ 236 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL---E-KGDRLP-----KP 236 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH---H-HTCCCC-----CC
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH---h-cCCCCC-----CC
Confidence 44333445567889999999999999999999999999999998 99999654443333211 1 111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
... ...+.+++.+||+.||++||++.|+++.|+...
T Consensus 237 ~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 237 DLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 112 234889999999999999999999999998543
No 86
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=384.65 Aligned_cols=261 Identities=29% Similarity=0.448 Sum_probs=215.0
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
...++|...+.||+|+||.||+|++.++..||||+++... ...+.|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 4456788899999999999999998888889999997643 345789999999999999999999999876 67899999
Q ss_pred ccCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
|+++|+|.+++.. ....+++.+++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999999974 3356999999999999999999999986 99999999999999999999999999987654322
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.......+++.|+|||.+....++.++|||||||++|||++ |+.||............ ..+.....
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i----~~~~~~~~--------- 485 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV----ERGYRMPC--------- 485 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH----HTTCCCCC---------
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCCC---------
Confidence 22334457889999999999999999999999999999999 99999765544333221 11211111
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccccc
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVLD 668 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~ 668 (733)
+......+.+++.+||+.||++|||+.+|++.|+.+....+
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 11123358899999999999999999999999997765443
No 87
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.8e-42 Score=360.03 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=205.9
Q ss_pred cCccccCcccCCCcccEEEcc-----cCCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-----LADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQL 464 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 464 (733)
+.|+..+.||+|+||.||+|+ ..+++.||||++... .......+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 357788899999999999998 346899999998754 233457889999999999999999999999876 668
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||+++|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999777678999999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCc--ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchh------------hHHHHHHHHH
Q 004732 545 EENT--HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF------------YLLDWALVLK 610 (733)
Q Consensus 545 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~------------~~~~~~~~~~ 610 (733)
.... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+...... .........
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL- 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH-
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH-
Confidence 4432 2233456888999999999999999999999999999999999886322110 001111111
Q ss_pred hhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 611 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
..+. ....+......+.+++.+||+.||.+|||+.++++.|+++
T Consensus 257 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 257 KEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred hccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111 1111122234588999999999999999999999999854
No 88
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.4e-41 Score=358.24 Aligned_cols=245 Identities=22% Similarity=0.319 Sum_probs=205.5
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.++...++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46788999999999999999994 578999999986431 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999999754 36999999999999999999999986 999999999999999999999999999865432
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ . .+.. . ....+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~-~~~~-~-----~p~~~ 261 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI---V-SGKV-R-----FPSHF 261 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-HCCC-C-----CCTTC
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHH---H-cCCC-C-----CCCCC
Confidence 23467999999999999999999999999999999999999999766554333211 1 1111 0 11122
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPS-----MSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt-----~~~vl~ 658 (733)
...+.+++.+||+.||.+||+ +.||++
T Consensus 262 ----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 ----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 234889999999999999998 777754
No 89
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=363.08 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=202.7
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+ ..+++.||+|.+... .......+.+|+++++.++|||||+++++|.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 3578888999999999999998 456899999998643 223456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+.+|+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999654 47999999999999999999999997 9999999999999999999999999998654332
Q ss_pred cccccccccCCCcccHHHHhh---CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||.................. .
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-~---------- 236 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-V---------- 236 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC-C----------
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc-c----------
Confidence 2345789999999999864 45899999999999999999999999644332222211111111 0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPS-MSSVLR 658 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~~vl~ 658 (733)
..++......+.+++.+||+.||.+||+ +.++.+
T Consensus 237 ~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0111112345889999999999999998 666653
No 90
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.9e-41 Score=351.40 Aligned_cols=255 Identities=30% Similarity=0.509 Sum_probs=204.2
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhc-------HHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQG-------NREFINEIGMISALQHPNLVKLYGCCIEGN 462 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 462 (733)
..++|...+.||+|+||+||+|+. .+++.||||.+....... .+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 346788899999999999999994 678999999986542211 167899999999999999999999987655
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC-----eEEccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-----SKISDF 537 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~-----~kl~Df 537 (733)
++||||+++|+|.+.+......+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++. +||+||
T Consensus 97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999999877778999999999999999999999884 24999999999999988776 999999
Q ss_pred CccccCcccCcccccccccCCCcccHHHHh--hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc
Q 004732 538 GLAKLDEEENTHISTRVAGTIGYMAPEYAM--RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 615 (733)
Q Consensus 538 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (733)
|+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||.......... ..........
T Consensus 174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~ 248 (287)
T 4f0f_A 174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-INMIREEGLR 248 (287)
T ss_dssp TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH-HHHHHHSCCC
T ss_pred Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH-HHHHhccCCC
Confidence 99975433 233467999999999984 4557899999999999999999999996543322211 1111111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 662 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 662 (733)
.. ..... ...+.+++.+||+.||.+|||+.|+++.|++
T Consensus 249 ~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 249 PT-----IPEDC----PPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CC-----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CC-----CCccc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11 11122 3458899999999999999999999999874
No 91
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=355.88 Aligned_cols=245 Identities=26% Similarity=0.318 Sum_probs=195.4
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|...+.||+|+||+||+|+. .+|+.||||++.... ......+..|+..+.++ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5788899999999999999995 479999999986532 23334556666666555 8999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+ +++|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 67999998877778999999999999999999999986 9999999999999999999999999998654432
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
......||++|+|||++.+ .++.++|||||||++|||++|..|+......... ..+....... .
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-------~~~~~~~~~~----~--- 275 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-------RQGYLPPEFT----A--- 275 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHH-------TTTCCCHHHH----T---
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH-------hccCCCcccc----c---
Confidence 2334569999999998875 7999999999999999999998777544321110 1111110000 1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 276 -~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 276 -GLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 112458899999999999999999999864
No 92
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.4e-41 Score=351.30 Aligned_cols=260 Identities=29% Similarity=0.451 Sum_probs=196.1
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
..++|...+.||+|+||+||+|+.. ..||||.+... .....+.|.+|++++++++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3467888999999999999999864 35999998654 334457799999999999999999999965 556689999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC-
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN- 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~- 547 (733)
||+++++|.+++......+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999877778999999999999999999999986 9999999999999999999999999997654322
Q ss_pred cccccccccCCCcccHHHHh---hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
........||+.|+|||.+. ...++.++||||||+++|||++|+.||.......... .....+.......
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~---- 248 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---EMVGRGSLSPDLS---- 248 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH---HHHHHTSCCCCTT----
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH---HHhcccccCcchh----
Confidence 22234467999999999986 5678899999999999999999999996543322111 1111111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.........+.+++.+||+.+|.+||++.++++.|+++.
T Consensus 249 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 249 -KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp -SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred -hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 111122345889999999999999999999999998654
No 93
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-41 Score=357.52 Aligned_cols=259 Identities=26% Similarity=0.454 Sum_probs=204.8
Q ss_pred hcCccccCcccCCCcccEEEcccCC-----CcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLAD-----GTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
..+|...+.||+|+||.||+|+... +..||||.+... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999998542 236999998754 3334567899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++|+|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999877778999999999999999999999996 99999999999999999999999999986654
Q ss_pred cCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCC
Q 004732 546 ENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 622 (733)
Q Consensus 546 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (733)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~----~~~~~~~----- 270 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI----NDGFRLP----- 270 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH----HTTCCCC-----
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH----HCCCcCC-----
Confidence 3221 1223456789999999999999999999999999999999 99999665544333211 1111110
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 623 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 623 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
.+......+.+++.+||+.+|.+||++.++++.|++....
T Consensus 271 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 ----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111233588999999999999999999999999865543
No 94
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9e-42 Score=360.82 Aligned_cols=266 Identities=27% Similarity=0.400 Sum_probs=204.5
Q ss_pred ccccCcccCCCcccEEEccc-----CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEE
Q 004732 395 FATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLL 466 (733)
Q Consensus 395 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 466 (733)
|...+.||+|+||+||+|.+ .+++.||||++.... ......+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 47788999999999987753 368899999997643 34456789999999999999999999999984 67899
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999998654 5899999999999999999999996 999999999999999999999999999876543
Q ss_pred Ccc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHH--HHHHHHHhhCcccccccCC
Q 004732 547 NTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLL--DWALVLKEQGKLMELVDTN 622 (733)
Q Consensus 547 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 622 (733)
... ......||..|+|||.+.+..++.++|||||||++|||++|+.||......... .+...........+.+...
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 321 233456888999999999999999999999999999999999998543211100 0000000000001111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 623 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 623 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.....+......+.+++.+||+.||.+|||+.|+++.|+.+.+
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111122223458899999999999999999999999986543
No 95
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.7e-41 Score=357.65 Aligned_cols=260 Identities=27% Similarity=0.421 Sum_probs=211.0
Q ss_pred hhhcCccccCcccCCCcccEEEccc------CCCcEEEEEEccccCh-hcHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKSK-QGNREFINEIGMISAL-QHPNLVKLYGCCIEG 461 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 461 (733)
...++|...+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+++++++ +||||+++++++.++
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3456788999999999999999973 3568999999975432 3457789999999999 999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcE
Q 004732 462 NQLLLIYEYLENNSLARALFEHRL-----------------KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNV 524 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Ni 524 (733)
+..++||||+++|+|.+++..... .+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceE
Confidence 999999999999999999975432 4899999999999999999999996 99999999999
Q ss_pred EecCCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhH
Q 004732 525 LLDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYL 602 (733)
Q Consensus 525 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~ 602 (733)
+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999876544332 2334567889999999999999999999999999999999 9999965432221
Q ss_pred HHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 603 LDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.. ... ..... ....... ...+.+++.+||+.||.+|||+.|+++.|++..
T Consensus 257 ~~--~~~-~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 257 FY--KMI-KEGFR-----MLSPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HH--HHH-HHTCC-----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH--HHh-ccCCC-----CCCcccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11 111 11111 0011112 235889999999999999999999999998543
No 96
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.9e-41 Score=349.99 Aligned_cols=251 Identities=24% Similarity=0.410 Sum_probs=205.4
Q ss_pred hcCccccCcccCCCcccEEEcccC-CC-------cEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA-DG-------TAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
.++|...+.||+|+||+||+|+.. ++ ..||+|.+........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457888899999999999999854 33 4799999977666667889999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC--------eEEc
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN--------SKIS 535 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~--------~kl~ 535 (733)
.++||||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999877667999999999999999999999996 999999999999998887 9999
Q ss_pred ccCccccCcccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCC-CccchhhHHHHHHHHHhhC
Q 004732 536 DFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNV-TKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 536 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~-~~~~~~~~~~~~~~~~~~~ 613 (733)
|||++...... ....||+.|+|||.+.+ ..++.++|||||||++|||++|..|+ ...+....... .....
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~---~~~~~ 235 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF---YEDRH 235 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH---HHTTC
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH---hhccC
Confidence 99999754332 23457899999999987 67999999999999999999966555 33332222111 11111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.. .... ...+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 236 ~~---~~~~---------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 236 QL---PAPK---------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CC---CCCS---------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CC---CCCC---------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11 1111 1237889999999999999999999999996544
No 97
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4e-41 Score=359.84 Aligned_cols=246 Identities=28% Similarity=0.467 Sum_probs=202.5
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
+.|...+.||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 457888999999999999998 4689999999986532 223457899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+. |+|.+.+......+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6888888766678999999999999999999999996 999999999999999999999999999865432
Q ss_pred ccccccccCCCcccHHHHh---hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+...... ...... .... ...
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~---~~~~~~-~~~~----~~~ 276 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNE-SPAL----QSG 276 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSC-CCCC----CCT
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhcC-CCCC----CCC
Confidence 3457999999999985 4678999999999999999999999996654433221 111111 1111 111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.++ ..+.+++.+||+.||++|||+.++++.
T Consensus 277 ~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 277 HWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 222 347889999999999999999999764
No 98
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.6e-41 Score=358.17 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=204.6
Q ss_pred hhcCccccCcccCCCcccEEEcccC-CCcEEEEEEcccc---ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 465 (733)
..++|...+.||+|+||.||+|+.. +|+.||||++... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468889999999999999999954 5889999998653 223456788999999988 8999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999999754 36999999999999999999999996 99999999999999999999999999985332
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+...+..... . ...
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~-~~~---------- 238 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---E-HNV---------- 238 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCC----------
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH---h-CCC----------
Confidence 22 22345689999999999999999999999999999999999999997765544332211 1 111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPS-----MSSVLR 658 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt-----~~~vl~ 658 (733)
.++......+.+++.+|++.||.+||+ +.+|++
T Consensus 239 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 011122345889999999999999995 466654
No 99
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=358.10 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=203.1
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcE----EEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTA----IAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.++|...+.||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|+.++++++||||++++++|..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 45788999999999999999984 45554 577777543 3445678999999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+|+||+.+|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887778999999999999999999999996 99999999999999999999999999987654
Q ss_pred cCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 546 ENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 546 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||............ ..+....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~~~~~~~------ 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----EKGERLP------ 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCCCC------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HcCCCCC------
Confidence 3222 2233457889999999999999999999999999999999 99999765544433221 1111110
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.+......+.+++.+||+.||.+||++.|+++.|+....
T Consensus 240 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 240 ---QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111122348889999999999999999999999987654
No 100
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.4e-41 Score=362.24 Aligned_cols=247 Identities=22% Similarity=0.316 Sum_probs=197.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 466 (733)
.++|...+.||+|+||+||+|+. .+++.||||+++... ......+.+|..++.++ +|||||++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 45788899999999999999994 568899999987542 22234578899999887 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999754 47999999999999999999999996 999999999999999999999999999853322
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhh-----HHHHHHHHHhhCcccccccC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY-----LLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 621 (733)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+..........
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2 22445789999999999999999999999999999999999999995321110 01111111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSM 653 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 653 (733)
.++......+.+++.+||+.||.+||++
T Consensus 280 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ----RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111123358899999999999999995
No 101
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=359.19 Aligned_cols=253 Identities=24% Similarity=0.342 Sum_probs=190.2
Q ss_pred hhhcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
...++|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||++++++|.+++..++||
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 34567889999999999999999954 68899999987543 3467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl~DfGla~~~~~ 545 (733)
||+++|+|.+++... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++....
T Consensus 128 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999998654 46899999999999999999999986 999999999999975 88999999999986543
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... +.. ... ... ....
T Consensus 204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~-i~~-~~~-~~~~----- 272 (349)
T 2w4o_A 204 QV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM-FRR-ILN-CEY-YFIS----- 272 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH-HHH-HHT-TCC-CCCT-----
T ss_pred cc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH-HHH-HHh-CCC-ccCC-----
Confidence 22 223467999999999999989999999999999999999999999654332211 111 111 111 0000
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.........+.+++.+|++.||++|||+.|+++.
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111223358899999999999999999999874
No 102
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.8e-41 Score=355.89 Aligned_cols=262 Identities=25% Similarity=0.437 Sum_probs=213.5
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccC------CCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIE 460 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 460 (733)
.....++|...+.||+|+||.||+|+.. +++.||||.+.... ......+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 3455678899999999999999999753 47889999997543 3344678999999999999999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC
Q 004732 461 GNQLLLIYEYLENNSLARALFEHR---------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 531 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 531 (733)
++..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCe
Confidence 999999999999999999997422 46799999999999999999999996 999999999999999999
Q ss_pred eEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004732 532 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 609 (733)
Q Consensus 532 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 609 (733)
+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||............
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~--- 253 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV--- 253 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH---
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH---
Confidence 99999999986544322 22334567889999999999999999999999999999999 88999665544333221
Q ss_pred HhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 610 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
..+..... .... ...+.+++.+||+.||.+||++.|+++.|++...
T Consensus 254 -~~~~~~~~-----~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 -MEGGLLDK-----PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -HTTCCCCC-----CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -HcCCcCCC-----CCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11111111 1122 2348889999999999999999999999986544
No 103
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-41 Score=348.74 Aligned_cols=255 Identities=26% Similarity=0.410 Sum_probs=208.1
Q ss_pred cCccccC-cccCCCcccEEEcccC---CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 393 NNFATDN-NIGEGGFGPVYKGLLA---DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 393 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
++|.... .||+|+||.||+|+.. ++..||||.+... .....+.+.+|++++++++||||+++++++ +.+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3444554 8999999999999743 5788999999764 334457799999999999999999999999 56678999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877678999999999999999999999996 9999999999999999999999999998765433
Q ss_pred ccc--ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 548 THI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 548 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
... .....||+.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i----~~~~~~~------- 233 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI----EQGKRME------- 233 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH----HTTCCCC-------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH----hcCCcCC-------
Confidence 222 223457889999999998899999999999999999998 99999665544333221 1111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.+......+.+++.+||+.+|++||++.++++.|++..
T Consensus 234 --~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 234 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp --CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11122345889999999999999999999999998543
No 104
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=350.37 Aligned_cols=263 Identities=24% Similarity=0.331 Sum_probs=201.4
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-----hhcHHHHHHHHHHHHhCC---CCceeeEeeEEEeC
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-----KQGNREFINEIGMISALQ---HPNLVKLYGCCIEG 461 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 461 (733)
.+++|...+.||+|+||+||+|+ ..+++.||||++.... ......+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 46789999999999999999999 4678999999986432 111245677777776664 99999999999876
Q ss_pred C-----eEEEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEc
Q 004732 462 N-----QLLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKIS 535 (733)
Q Consensus 462 ~-----~~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~ 535 (733)
. ..++||||+. |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 5 5899999997 59999987543 34999999999999999999999997 9999999999999999999999
Q ss_pred ccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc
Q 004732 536 DFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 615 (733)
Q Consensus 536 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 615 (733)
|||+++....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.................
T Consensus 163 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 163 DFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp SCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9999986543322 34567999999999999999999999999999999999999999766655443322221111100
Q ss_pred ccccc------CC--CCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 616 MELVD------TN--PGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 616 ~~~~~------~~--~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
..... .. ...... .+....+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 00 000000 1123458899999999999999999999763
No 105
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.5e-41 Score=355.89 Aligned_cols=259 Identities=27% Similarity=0.442 Sum_probs=210.5
Q ss_pred hhcCccccCcccCCCcccEEEccc--------CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL--------ADGTAIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIE 460 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 460 (733)
..++|...+.||+|+||.||+|+. .++..||||++... .......+.+|+++++++ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 346788899999999999999974 35678999999754 333456789999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEE
Q 004732 461 GNQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 525 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nil 525 (733)
++..++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 999999999999999999997543 24899999999999999999999996 999999999999
Q ss_pred ecCCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHH
Q 004732 526 LDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLL 603 (733)
Q Consensus 526 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~ 603 (733)
++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.........
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 999999999999999866543322 2233457889999999999899999999999999999999 99999765544333
Q ss_pred HHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 604 DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
... . .+.... ....+ ...+.+++.+||+.+|.+||++.|+++.|+.+..
T Consensus 270 ~~~---~-~~~~~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 KLL---K-EGHRMD-----KPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHH---H-HTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH---h-cCCCCC-----CCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 221 1 111111 11122 2348889999999999999999999999997654
No 106
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=359.88 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=196.9
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCC--CceeeEeeEEEeCCeEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQH--PNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l 466 (733)
..++|...+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++| |||+++++++.++...++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 45678899999999999999999888999999998643 33345678999999999986 999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||| +.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 87 v~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEe-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 999 5688999999764 47999999999999999999999996 99999999999997 578999999999876543
Q ss_pred Ccc-cccccccCCCcccHHHHhh-----------CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc
Q 004732 547 NTH-ISTRVAGTIGYMAPEYAMR-----------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK 614 (733)
Q Consensus 547 ~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 614 (733)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..... ...
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~-~~~---- 234 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLH-AII---- 234 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHH-HHH----
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-HHHHH-HHh----
Confidence 332 2345679999999999975 67899999999999999999999999543211 11111 111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
+......++......+.+++.+||+.||.+|||+.|+++.
T Consensus 235 -----~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 -----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111111111112357899999999999999999999865
No 107
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-41 Score=359.11 Aligned_cols=247 Identities=26% Similarity=0.382 Sum_probs=201.9
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+ ..+++.||||.+.... ......+.+|+++++.++||||+++++++.++...++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3578899999999999999999 4678999999986431 12235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+ +|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 78899988654 47999999999999999999999996 9999999999999999999999999998655432
Q ss_pred cccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.......+ ...+.... ..
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~~~-~~ 226 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNSCV-YV 226 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCSSC-CC
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHcCC-CC
Confidence 2344679999999999987765 7899999999999999999999965432111 11111100 11
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+......+.+++.+|++.||.+|||+.|+++.
T Consensus 227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 112223458899999999999999999999764
No 108
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-40 Score=353.12 Aligned_cols=249 Identities=25% Similarity=0.339 Sum_probs=195.7
Q ss_pred hcCccccCcccCCCcccEEEccc----CCCcEEEEEEccccC----hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45788889999999999999985 478999999987542 2234567889999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999754 36899999999999999999999996 999999999999999999999999999754
Q ss_pred cccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+........ .. ... .
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~-~~~------~- 239 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI---LK-CKL------N- 239 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HH-TCC------C-
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHH---Hh-CCC------C-
Confidence 33222 233467999999999999989999999999999999999999999766544333211 11 110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRP-----SMSSVLRM 659 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~~ 659 (733)
.+......+.+++.+||+.||.+|| ++.|+++.
T Consensus 240 ---~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 ---LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1111223588999999999999999 67787653
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=351.65 Aligned_cols=249 Identities=24% Similarity=0.385 Sum_probs=196.8
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccCh--------------------------hcHHHHHHHHHHHH
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK--------------------------QGNREFINEIGMIS 444 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 444 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3578888999999999999998 45789999999865421 11246889999999
Q ss_pred hCCCCceeeEeeEEEe--CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCC
Q 004732 445 ALQHPNLVKLYGCCIE--GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKAT 522 (733)
Q Consensus 445 ~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~ 522 (733)
+++||||+++++++.+ +...++||||+++++|.+++. ...+++..+..++.|+++||+|||+.+ |+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence 9999999999999987 578999999999999987643 347999999999999999999999996 999999999
Q ss_pred cEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCC---CCccchhHhHHHHHHHHHhCCCCCCccch
Q 004732 523 NVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGH---LTEKADVYSFGIVALEIVSGRSNVTKEDM 599 (733)
Q Consensus 523 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~elltg~~p~~~~~~ 599 (733)
||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999986554322 223467999999999987654 47889999999999999999999976654
Q ss_pred hhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 600 FYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...... ... ... ... .....+ ..+.+++.+||+.||++||++.|+++
T Consensus 246 ~~~~~~---~~~-~~~-~~~---~~~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCLHSK---IKS-QAL-EFP---DQPDIA----EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHH---HHH-CCC-CCC---SSSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHH---Hhc-ccC-CCC---CccccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 332221 111 111 000 011222 34889999999999999999999864
No 110
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=384.15 Aligned_cols=254 Identities=26% Similarity=0.401 Sum_probs=203.5
Q ss_pred CccccC-cccCCCcccEEEcccC---CCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 394 NFATDN-NIGEGGFGPVYKGLLA---DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 394 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++...+ .||+|+||.||+|.+. ++..||||+++... ....+.|.+|++++++++|||||+++++|.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333334 7999999999999853 46679999997643 3456789999999999999999999999976 5689999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+++|+|.+++......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999877778999999999999999999999986 99999999999999999999999999987654332
Q ss_pred cc--ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 549 HI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 549 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+........ ..+.....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i----~~~~~~~~------- 560 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI----EQGKRMEC------- 560 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH----HTTCCCCC-------
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HcCCCCCC-------
Confidence 22 122345789999999999999999999999999999998 99999766554433322 12221111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
+......+.+++.+||+.+|++||++.+|++.|+...
T Consensus 561 --p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 561 --PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp --CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1112345889999999999999999999999998643
No 111
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.7e-40 Score=354.32 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=193.2
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||+||+|+. .+++.||||++..... ....+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 46788999999999999999994 4789999999865432 336788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC--eEEcccCccccCcccCc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN--SKISDFGLAKLDEEENT 548 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~--~kl~DfGla~~~~~~~~ 548 (733)
+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999998654 37999999999999999999999986 999999999999987765 9999999997433221
Q ss_pred ccccccccCCCcccHHHHhhCCCCcc-chhHhHHHHHHHHHhCCCCCCccchhh-HHHHHHHHHhhCcccccccCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEK-ADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~Gvil~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||....... ............ . ... ....
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~ 246 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK-Y-SIP---DDIR 246 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC-C-CCC---TTSC
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC-C-CCC---CcCC
Confidence 2234579999999999988887665 899999999999999999996543221 111111111110 0 000 0111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 247 ~s----~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 IS----PECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CC----HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CC----HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 22 347899999999999999999999864
No 112
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-40 Score=354.20 Aligned_cols=247 Identities=23% Similarity=0.323 Sum_probs=198.6
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 466 (733)
.++|...+.||+|+||.||+|+. .+++.||||++... .......+.+|..+++++ +||||+++++++.++...++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 35688889999999999999995 56899999998654 233345688899999988 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999999754 47999999999999999999999996 999999999999999999999999999854322
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchh-----hHHHHHHHHHhhCcccccccC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-----YLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 621 (733)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...............
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 2234568999999999999999999999999999999999999999542111 001111111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSM 653 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 653 (733)
.++......+.+++.+||+.||++||++
T Consensus 237 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ----RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0111123358889999999999999996
No 113
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.9e-41 Score=356.46 Aligned_cols=250 Identities=21% Similarity=0.359 Sum_probs=196.9
Q ss_pred hcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGN------- 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 462 (733)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888899999999999999954 89999999986543 334578999999999999999999999987653
Q ss_pred --------------------------------------------------eEEEEEEccCCCCHHHHHHhcC--CCCCHH
Q 004732 463 --------------------------------------------------QLLLIYEYLENNSLARALFEHR--LKLDWP 490 (733)
Q Consensus 463 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~--~~l~~~ 490 (733)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3899999999999999997532 245677
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc-----------ccccccccCCC
Q 004732 491 TRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT-----------HISTRVAGTIG 559 (733)
Q Consensus 491 ~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~~ 559 (733)
.++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 79999999999999999986 99999999999999999999999999987654321 12234579999
Q ss_pred cccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHH
Q 004732 560 YMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVA 639 (733)
Q Consensus 560 y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 639 (733)
|+|||.+.+..++.++|||||||++|||++|..|+.... ... . ........ .........+.+++
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--~~~---~-~~~~~~~~---------~~~~~~~~~~~~li 306 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--RII---T-DVRNLKFP---------LLFTQKYPQEHMMV 306 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--HHH---H-HHHTTCCC---------HHHHHHCHHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--HHH---H-HhhccCCC---------cccccCChhHHHHH
Confidence 999999999999999999999999999999876642111 110 0 01111110 01122334578899
Q ss_pred HHhhcCCCCCCCCHHHHHHH
Q 004732 640 LLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 640 ~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+||+.||++|||+.|+++.
T Consensus 307 ~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHHS
T ss_pred HHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999873
No 114
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-40 Score=343.23 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=205.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||.||+|.. .+|+.||+|++... .......+.+|++++++++||||+++++++.++...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46889999999999999999984 56899999998654 3334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC---eEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~---~kl~DfGla~~~~~ 545 (733)
||+++++|.+.+... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988654 47999999999999999999999996 999999999999987655 99999999976554
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+......... .+... ...+ ...
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~-~~~~-~~~ 232 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK----AGAYD-YPSP-EWD 232 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HTCCC-CCTT-TTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHH----hcccc-CCch-hhc
Confidence 322 234679999999999999999999999999999999999999997665444332211 11110 0000 011
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
..+ ..+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 233 TVT----PEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 222 34889999999999999999999976
No 115
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-40 Score=345.86 Aligned_cols=261 Identities=21% Similarity=0.274 Sum_probs=207.4
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEE-EeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCC-IEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+ ..+|+.||||++...... ..+.+|+.+++.++|+++++.+.++ .++...++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 4688999999999999999999 468999999998654332 4688999999999998877666655 56788899999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCccc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~~~ 546 (733)
|+ +++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 99999999866678999999999999999999999996 9999999999999 48889999999999866543
Q ss_pred Ccc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccch---hhHHHHHHHHHhhCcccc
Q 004732 547 NTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM---FYLLDWALVLKEQGKLME 617 (733)
Q Consensus 547 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 617 (733)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..................
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 321 12456799999999999999999999999999999999999999954321 111111111111111110
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 618 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 618 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
.. ..++ ..+.+++.+||+.||++||++.+|++.|+......
T Consensus 242 ~~-----~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 242 LC-----KGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HT-----TTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH-----hhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 10 1122 34889999999999999999999999999765544
No 116
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2e-40 Score=343.24 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=204.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||.||+|+. .++..||+|++........+.+.+|++++++++||||+++++++.++...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 35688889999999999999994 46789999998766555667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCcccC
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~~~~ 547 (733)
+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999988754 46899999999999999999999996 9999999999999 788899999999998655432
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
. .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||............ . .+... .... ....
T Consensus 164 ~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~-~~~~~-~~~~-~~~~- 233 (277)
T 3f3z_A 164 M--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI---R-EGTFT-FPEK-DWLN- 233 (277)
T ss_dssp C--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-HCCCC-CCHH-HHTT-
T ss_pred c--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH---H-hCCCC-CCch-hhhc-
Confidence 2 234579999999998865 4899999999999999999999999765543322211 1 11110 0000 0001
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
....+.+++.+|++.||.+||++.++++
T Consensus 234 ---~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 ---VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1235889999999999999999999865
No 117
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.5e-40 Score=365.97 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=209.3
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCC-CceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQH-PNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++...... ..+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 4688999999999999999999 467999999987654332 457899999999987 566667777788899999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCccc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~~~ 546 (733)
|+ +++|.+++......+++.+++.++.||+.||+|||+.+ ||||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 99999999876778999999999999999999999996 9999999999999 68899999999999876543
Q ss_pred Ccc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccch---hhHHHHHHHHHhhCcccc
Q 004732 547 NTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM---FYLLDWALVLKEQGKLME 617 (733)
Q Consensus 547 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 617 (733)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..................
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 322 12356799999999999999999999999999999999999999965332 111111111111111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 618 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 618 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
+.. .++ ..+.+++..||+.+|++||++.+|+++|+.+....
T Consensus 240 l~~-----~~p----~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 LCR-----GYP----TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHT-----TSC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred Hhc-----CCc----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 111 112 34889999999999999999999999999765544
No 118
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-40 Score=342.04 Aligned_cols=249 Identities=26% Similarity=0.358 Sum_probs=198.3
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
++|...+.||+|+||.||+|+ ..++..||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 467788999999999999998 4578999999986542 33457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCc
Q 004732 471 LENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 471 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~ 544 (733)
+++|+|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999863 3467999999999999999999999986 9999999999999 456789999999998654
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
.... .....||+.|+|||.+. +.++.++|||||||++|||++|+.||............. . ....... ..
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~---~-~~~~~~~---~~ 248 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT---Y-KEPNYAV---EC 248 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCCCCCC-----
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc---c-CCccccc---cc
Confidence 4322 34467999999999875 578999999999999999999999997665443332211 1 1110000 00
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+ ..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RPLT----PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122 34778999999999999999999986
No 119
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-40 Score=342.22 Aligned_cols=245 Identities=25% Similarity=0.403 Sum_probs=181.6
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|...+.||+|+||.||+|+ ..+|+.||+|++... .......+.+|+++++.++||||+++++++.+++..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 578999999999999999998 467899999998654 2233567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+ +++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 67888887654 47999999999999999999999997 99999999999999999999999999986544322
Q ss_pred ccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||............ .. +.. . .....
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~-~~~-~-----~~~~~ 235 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI---SN-GVY-T-----LPKFL 235 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH-TCC-C-----CCTTS
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-CCC-C-----CCccC
Confidence 234568999999999987665 78999999999999999999999766544332211 11 110 0 11112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+|++.||.+|||+.|+++
T Consensus 236 ----~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 ----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 234788999999999999999999975
No 120
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.7e-41 Score=345.26 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=204.6
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 467 (733)
.++|...+.||+|+||.||+|+.. ++.||||++... .....+.|.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 356788899999999999999975 889999998754 234456799999999999999999999999887 788999
Q ss_pred EEccCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 468 YEYLENNSLARALFEHRL-KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
|||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 999999999999975443 5899999999999999999999873 3499999999999999999999999988754222
Q ss_pred CcccccccccCCCcccHHHHhhCCCCc---cchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTE---KADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||........... ......... .
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~-----~ 232 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK---VALEGLRPT-----I 232 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH---HHHSCCCCC-----C
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH---HHhcCCCCC-----C
Confidence 2346899999999998765444 89999999999999999999976544333221 111111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.... ...+.+++.+||+.||++|||+.++++.|+...
T Consensus 233 ~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 233 PPGI----SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1122 234889999999999999999999999998643
No 121
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-40 Score=348.11 Aligned_cols=261 Identities=21% Similarity=0.256 Sum_probs=200.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 46788999999999999999994 478999999986542 22346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999999754 47999999999999999999999996 9999999999999999999999999998665544
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||........... ........... ...+
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~----~~~~ 261 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH---INQAIPRPSTV----RPGI 261 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH---HHSCCCCGGGT----STTC
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH---hccCCCCcccc----CCCC
Confidence 3334456799999999999888899999999999999999999999976554322111 11111110000 1112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHhccCcccc
Q 004732 628 DKEQVMVMINVALLCANASPTIRP-SMSSVLRMLECGVDVL 667 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RP-t~~~vl~~L~~~~~~~ 667 (733)
+ ..+.+++.+||+.||++|| ++.++++.|+......
T Consensus 262 ~----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 P----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp C----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred C----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 2 2488899999999999999 9999999999765533
No 122
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.3e-40 Score=346.02 Aligned_cols=262 Identities=21% Similarity=0.274 Sum_probs=204.1
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEE-EeCCeEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCC-IEGNQLLLIY 468 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 468 (733)
..++|...+.||+|+||.||+|+ ..+++.||||.+...... ..+.+|+++++.++|++++..++++ .+++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 35689999999999999999999 467899999987544322 4578899999999988877766665 6678889999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~~ 545 (733)
||+ +++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999876778999999999999999999999996 9999999999999 7889999999999987654
Q ss_pred cCcc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchh---hHHHHHHHHHhhCccc
Q 004732 546 ENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF---YLLDWALVLKEQGKLM 616 (733)
Q Consensus 546 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~ 616 (733)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ................
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3321 223467999999999999999999999999999999999999999543211 1111111111111110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 617 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
... ..++ ..+.+++.+||+.||++||++.+|++.|+......
T Consensus 241 ~~~-----~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 241 VLC-----KGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHT-----TTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhh-----ccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 1112 34889999999999999999999999999765543
No 123
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-41 Score=363.07 Aligned_cols=257 Identities=26% Similarity=0.423 Sum_probs=196.8
Q ss_pred CccccCcccCCCcccEEEcccC--CC--cEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCeEEEE
Q 004732 394 NFATDNNIGEGGFGPVYKGLLA--DG--TAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIE-GNQLLLI 467 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 467 (733)
.|...+.||+|+||.||+|+.. ++ ..||||.+... .....+.|.+|+.++++++||||++++++|.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4567789999999999999853 22 36899998654 33445789999999999999999999999765 4578999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++......+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877778999999999999999999999996 9999999999999999999999999998654332
Q ss_pred cc---cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 548 TH---ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 548 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.. ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...+........ ..+.... .
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~----~~~~~~~-----~ 317 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQGRRLL-----Q 317 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH----HTTCCCC-----C
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH----HcCCCCC-----C
Confidence 21 1233567889999999999999999999999999999999 56677544433332221 1111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
....+ ..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 318 p~~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 318 PEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122 3488899999999999999999999999876543
No 124
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=348.78 Aligned_cols=254 Identities=30% Similarity=0.500 Sum_probs=197.4
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccC
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 472 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 472 (733)
++|...+.||+|+||.||+|+.. ++.||||.+... ...+.|.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46778899999999999999875 788999998643 345789999999999999999999998863 4789999999
Q ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC-eEEcccCccccCcccCcc
Q 004732 473 NNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-SKISDFGLAKLDEEENTH 549 (733)
Q Consensus 473 ~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~-~kl~DfGla~~~~~~~~~ 549 (733)
+|+|.+++.... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 999999997543 24789999999999999999999943235999999999999998887 799999999754332
Q ss_pred cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhh-HHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 550 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ...|. ...+...... ...+
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~ 230 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLI-----KNLP 230 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH---HHTTCCCCCB-----TTCC
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH---HhcCCCCCcc-----cccC
Confidence 223468999999999999899999999999999999999999995432211 11111 1111111111 1122
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
..+.+++.+||+.||++|||+.++++.|+......
T Consensus 231 ----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 231 ----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 34888999999999999999999999998765443
No 125
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4e-41 Score=354.66 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=195.5
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC----e
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGN----Q 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 463 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++.... ......+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 4678899999999999999999 4678999999997642 233457889999999999999999999987654 3
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.++||||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 49999999999999999754 37999999999999999999999996 999999999999999999999999999866
Q ss_pred cccCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 544 EEENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 544 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ...........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~-- 241 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ---HVREDPIPPSA-- 241 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHCCCCCHHH--
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HhcCCCCCccc--
Confidence 543222 23346799999999999999999999999999999999999999976654332211 11111111000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
..... ...+.+++.+||+.||.+||+..++++
T Consensus 242 -~~~~~----~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 242 -RHEGL----SADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp -HSTTC----CHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred -ccCCC----CHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 00111 234889999999999999998777654
No 126
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.6e-40 Score=342.72 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=202.8
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
+.++|...+.||+|+||.||+|+ ..++..||||.+.... ......+.+|++++++++||||+++++++.++...++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 45688899999999999999998 4567899999985432 2234678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999999754 46999999999999999999999986 999999999999999999999999998654332
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+........ .. .. ......
T Consensus 163 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~-~~------~~~~~~ 229 (279)
T 3fdn_A 163 R---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI---SR-VE------FTFPDF 229 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HH-TC------CCCCTT
T ss_pred c---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH---Hh-CC------CCCCCc
Confidence 2 23457899999999999999999999999999999999999999766544332211 11 10 001111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ...+.+++.+||+.||.+||++.|+++.
T Consensus 230 ~----~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 V----TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp S----CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred C----CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 2 2347889999999999999999999874
No 127
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-40 Score=359.08 Aligned_cols=247 Identities=26% Similarity=0.345 Sum_probs=194.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHH-HHhCCCCceeeEeeEEEeCCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGM-ISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
.++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 35788889999999999999995 568899999986542 2233456677776 577899999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999754 47899999999999999999999996 999999999999999999999999999853322
Q ss_pred CcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 547 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ . . ... . ....
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i--~-~-~~~-~-----~~~~ 261 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI--L-N-KPL-Q-----LKPN 261 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH--H-H-SCC-C-----CCSS
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--H-h-ccc-C-----CCCC
Confidence 2 2234578999999999999999999999999999999999999999776654433211 1 1 110 0 1111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVL 657 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl 657 (733)
. ...+.+++.+|++.||.+||++.+.+
T Consensus 262 ~----~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 262 I----TNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred C----CHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 2 23488899999999999999986433
No 128
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.2e-41 Score=369.89 Aligned_cols=250 Identities=25% Similarity=0.317 Sum_probs=197.7
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
..++|...+.||+|+||.||+|+ ..+|+.||||++... .......+.+|+++++.++||||++++++|.+.+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 34678899999999999999998 567899999998653 23334567889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 226 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999998754 479999999999999999999997 75 99999999999999999999999999985433
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... . ... . ...
T Consensus 302 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~-~~~-~-----~p~ 370 (446)
T 4ejn_A 302 DGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---M-EEI-R-----FPR 370 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-CCC-C-----CCT
T ss_pred CCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH---h-CCC-C-----CCc
Confidence 222 2345789999999999999999999999999999999999999997665544333221 1 110 0 111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRP-----SMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~~ 659 (733)
.. ...+.+++.+||+.||.+|| ++.|+++.
T Consensus 371 ~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 371 TL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp TS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred cC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 12 23588999999999999999 99998763
No 129
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-40 Score=359.98 Aligned_cols=262 Identities=20% Similarity=0.306 Sum_probs=204.0
Q ss_pred hhcCccccCcccCC--CcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 391 ATNNFATDNNIGEG--GFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 391 ~~~~~~~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
..++|...+.||+| +||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34678899999999 9999999995 479999999986542 334467888999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 466 LIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
+|||||++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999754 357999999999999999999999996 9999999999999999999999999986543
Q ss_pred ccCc------ccccccccCCCcccHHHHhh--CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccc
Q 004732 545 EENT------HISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM 616 (733)
Q Consensus 545 ~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (733)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+......... .+...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~~ 255 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL----NGTVP 255 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh----cCCCC
Confidence 2211 11223478999999999987 579999999999999999999999996543322211000 00000
Q ss_pred cccc------------------------------C------CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 617 ELVD------------------------------T------NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 617 ~~~~------------------------------~------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+ . .....+.......+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000 0 00001112223468899999999999999999999754
No 130
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=357.70 Aligned_cols=262 Identities=15% Similarity=0.163 Sum_probs=206.9
Q ss_pred hcCccccCcccCCCcccEEEcccC---------CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceee---------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA---------DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVK--------- 453 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 453 (733)
.++|...+.||+|+||.||+|+.. +++.||||.+... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 367889999999999999999855 3789999998643 36789999999999999987
Q ss_pred ------EeeEEEe-CCeEEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEE
Q 004732 454 ------LYGCCIE-GNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 525 (733)
Q Consensus 454 ------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nil 525 (733)
+++++.. +...++||||+ +++|.+++... ...+++.+++.++.||+.||+|||+.+ |+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 6778877 78899999999 99999999864 467999999999999999999999996 999999999999
Q ss_pred ecCCC--CeEEcccCccccCcccCcc------cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCcc
Q 004732 526 LDKDL--NSKISDFGLAKLDEEENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE 597 (733)
Q Consensus 526 l~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~ 597 (733)
++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999866543221 123457999999999999999999999999999999999999999654
Q ss_pred c--hhhHHHHHHHHHhhCcccccccCCCC-CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccccc
Q 004732 598 D--MFYLLDWALVLKEQGKLMELVDTNPG-SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVLD 668 (733)
Q Consensus 598 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~ 668 (733)
. ............. ........... ..++ ..+.+++.+||+.||++||++.+|++.|+++.....
T Consensus 272 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVD--KPGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTCHHHHHHHHHHHHH--SCCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHhccC--ChhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 2 2222222211111 11122221111 1122 348889999999999999999999999997655443
No 131
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-40 Score=359.73 Aligned_cols=263 Identities=22% Similarity=0.369 Sum_probs=194.1
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEeCC--eE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGN--QL 464 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~ 464 (733)
..++|...+.||+|+||.||+|+ ..+|+.||||++... .......+.+|+.+++++. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 35688999999999999999998 567899999998643 3344567889999999997 999999999998654 78
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++|||||+ |+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+...
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999998 589998865 37899999999999999999999996 9999999999999999999999999998653
Q ss_pred cc--------------------CcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHH
Q 004732 545 EE--------------------NTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLL 603 (733)
Q Consensus 545 ~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~ 603 (733)
.. .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112334679999999999987 67999999999999999999999999766554433
Q ss_pred HHHHHHHhhCcccccc---------------------cCCCCCCCC------------HHHHHHHHHHHHHhhcCCCCCC
Q 004732 604 DWALVLKEQGKLMELV---------------------DTNPGSNFD------------KEQVMVMINVALLCANASPTIR 650 (733)
Q Consensus 604 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~------------~~~~~~l~~l~~~c~~~~P~~R 650 (733)
..............+. .......++ ......+.+++.+||+.||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 2221111100000000 000000000 0112358899999999999999
Q ss_pred CCHHHHHHH
Q 004732 651 PSMSSVLRM 659 (733)
Q Consensus 651 Pt~~~vl~~ 659 (733)
||+.|+++.
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999865
No 132
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=348.19 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=200.3
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5788899999999999999995 568999999886543 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 99999999887543 57999999999999999999999996 999999999999999999999999999865533222
Q ss_pred cccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh-----------hCc-cc
Q 004732 550 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE-----------QGK-LM 616 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~-~~ 616 (733)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||................. ... ..
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 159 -YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred -cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 234578999999999976 5689999999999999999999999976554433322211110 000 00
Q ss_pred ccccCCCCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 617 ELVDTNPGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 617 ~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+.+..... ......+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000011100000 1123358899999999999999999999864
No 133
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-40 Score=361.82 Aligned_cols=250 Identities=22% Similarity=0.347 Sum_probs=196.9
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCC--CCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQ--HPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|...+++.||||++... .......+.+|++++++++ |||||++++++..++..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3468889999999999999999877999999998653 3344577899999999996 59999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|| +.+++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 135 ~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 67889999997654 7899999999999999999999986 99999999999996 5789999999998765433
Q ss_pred cc-cccccccCCCcccHHHHhh-----------CCCCccchhHhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhhCc
Q 004732 548 TH-ISTRVAGTIGYMAPEYAMR-----------GHLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQGK 614 (733)
Q Consensus 548 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~-~~~~~~~~~~~~~~~ 614 (733)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .... ........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~---~~~~~~~~ 285 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---HAIIDPNH 285 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH---HHHHCTTS
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH---HHHhCccc
Confidence 22 2345679999999999875 3689999999999999999999999964321 1111 11111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...++......+.+++.+||+.||.+||++.|+++.
T Consensus 286 ---------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 ---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111112358889999999999999999999864
No 134
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=349.11 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=205.7
Q ss_pred CccccCcccCCCcccEEEcccC-CC---cEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE-EEE
Q 004732 394 NFATDNNIGEGGFGPVYKGLLA-DG---TAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL-LLI 467 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 467 (733)
.|...+.||+|+||+||+|+.. ++ ..||+|.+.... ....+.+.+|++++++++||||+++++++.+++.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999843 23 379999987543 34457889999999999999999999999876655 999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+.+|+|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999876778999999999999999999999996 9999999999999999999999999998654332
Q ss_pred c---ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCC-CccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 548 T---HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV-TKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 548 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
. .......+|+.|+|||.+.+..++.++||||||+++|||++|+.|+ ...+......... ..... ..
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~-----~~ 249 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA----QGRRL-----PQ 249 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH----TTCCC-----CC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh----cCCCC-----CC
Confidence 1 1223456889999999999999999999999999999999966665 4333333332211 11110 01
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
.... ...+.+++.+||+.||.+|||+.++++.|++....
T Consensus 250 ~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 250 PEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cccc----hHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112 23588999999999999999999999999876543
No 135
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=362.92 Aligned_cols=269 Identities=19% Similarity=0.233 Sum_probs=211.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC--eEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGN--QLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 467 (733)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.. ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 35688889999999999999995 468999999987543 234577889999999999999999999998765 78999
Q ss_pred EEccCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe----cCCCCeEEcccCccc
Q 004732 468 YEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL----DKDLNSKISDFGLAK 541 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill----~~~~~~kl~DfGla~ 541 (733)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997432 34999999999999999999999996 9999999999999 777889999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhh--------CCCCccchhHhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhh
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMR--------GHLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQ 612 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~-~~~~~~~~~~~~~ 612 (733)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .............
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp ECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred EccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 6554322 234679999999999875 4678899999999999999999999943221 1111111111111
Q ss_pred Ccc--cccc------------cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 613 GKL--MELV------------DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 613 ~~~--~~~~------------~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
... ...+ +..............+.+++.+||+.||++||++.|+++.++.+.+
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 110 0000 0111223456777789999999999999999999999999886544
No 136
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-40 Score=350.47 Aligned_cols=262 Identities=25% Similarity=0.417 Sum_probs=200.6
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccC----CCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG 461 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 461 (733)
+....++|...+.||+|+||.||+|+.. .+..||||.+... .....+.+.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3445678889999999999999999743 3458999998654 333456789999999999999999999999875
Q ss_pred C-----eEEEEEEccCCCCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC
Q 004732 462 N-----QLLLIYEYLENNSLARALFE-----HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 531 (733)
Q Consensus 462 ~-----~~~lV~e~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 531 (733)
. ..++||||+++|+|.+++.. ....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCc
Confidence 5 35999999999999999853 3356999999999999999999999986 999999999999999999
Q ss_pred eEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004732 532 SKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 609 (733)
Q Consensus 532 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 609 (733)
+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.............
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-- 263 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-- 263 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH--
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH--
Confidence 999999999865443222 2233567889999999999999999999999999999999 888986655444333211
Q ss_pred HhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 610 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.+..... ...+ ...+.+++.+||+.||.+||++.++++.|+....
T Consensus 264 --~~~~~~~-----~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 264 --HGHRLKQ-----PEDC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp --TTCCCCC-----BTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --cCCCCCC-----Cccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111 1112 2358899999999999999999999999986544
No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=342.87 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=184.5
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788899999999999999984 679999999986432 12346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999877678999999999999999999999996 9999999999999999999999999998654322
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ....... ..
T Consensus 167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------------~~~~~~~--~~ 231 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------------KVVLADY--EM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------CCSSCC--CC
T ss_pred Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------------HHhhccc--CC
Confidence 21 234568999999999998889999999999999999999999996543322111 0000000 01
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+......+.+++.+||+.||++||++.++++
T Consensus 232 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112335889999999999999999999876
No 138
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.7e-41 Score=356.08 Aligned_cols=260 Identities=28% Similarity=0.399 Sum_probs=208.8
Q ss_pred HhhhcCccccCcccCCCcccEEEcccC-CC-----cEEEEEEccccC-hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLLA-DG-----TAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIE 460 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 460 (733)
....++|...+.||+|+||.||+|+.. ++ ..||+|.+.... ....+.+.+|+++++++ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 345678899999999999999999843 22 479999987643 33456789999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec
Q 004732 461 GNQLLLIYEYLENNSLARALFEH-------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD 527 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~ 527 (733)
++..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEEC
Confidence 99999999999999999999743 346899999999999999999999986 99999999999999
Q ss_pred CCCCeEEcccCccccCcccCcc-cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHH
Q 004732 528 KDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDW 605 (733)
Q Consensus 528 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~ 605 (733)
.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||..........
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~- 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY- 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH-
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH-
Confidence 9999999999999865443322 2334567889999999999999999999999999999999 899996543222111
Q ss_pred HHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 606 ALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
.......... ..... ...+.+++.+||+.||.+|||+.|+++.|+..
T Consensus 278 --~~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 278 --KLVKDGYQMA-----QPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp --HHHHHTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHhcCCCCC-----CCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 1111111110 01111 23588899999999999999999999999854
No 139
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-40 Score=355.72 Aligned_cols=259 Identities=20% Similarity=0.240 Sum_probs=201.4
Q ss_pred HHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc-----ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-----SKQGNREFINEIGMISALQHPNLVKLYGCCIEG 461 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 461 (733)
+....++|...+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345567899999999999999999984 57889999998643 233456889999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 004732 462 NQLLLIYEYLENNSLARALFEH---------------------------------------RLKLDWPTRRRICLGIARG 502 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~~ 502 (733)
+..++||||+++|+|.+++... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988410 1123567788999999999
Q ss_pred HHHHHcCCCCCeecCCCCCCcEEecCCC--CeEEcccCccccCcccCc---ccccccccCCCcccHHHHhh--CCCCccc
Q 004732 503 LAYLHGESRIKVVHRDIKATNVLLDKDL--NSKISDFGLAKLDEEENT---HISTRVAGTIGYMAPEYAMR--GHLTEKA 575 (733)
Q Consensus 503 l~~LH~~~~~~ivH~Dik~~Nill~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 575 (733)
|+|||+.+ |+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999996 99999999999998776 899999999986543221 12345679999999999975 6789999
Q ss_pred hhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHH
Q 004732 576 DVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSS 655 (733)
Q Consensus 576 Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~ 655 (733)
|||||||++|||++|+.||............ ....... ..+ ........+.+++.+||+.||.+||++.|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~~--~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQV---LNKKLCF--ENP-----NYNVLSPLARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCT--TSG-----GGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHH---Hhccccc--CCc-----ccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 9999999999999999999765544332211 1111100 000 00012235889999999999999999999
Q ss_pred HHHH
Q 004732 656 VLRM 659 (733)
Q Consensus 656 vl~~ 659 (733)
+++.
T Consensus 328 ~l~h 331 (345)
T 3hko_A 328 ALQH 331 (345)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 9873
No 140
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.9e-40 Score=346.15 Aligned_cols=259 Identities=26% Similarity=0.449 Sum_probs=197.9
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|...+.||+|+||.||+|. ..+|+.||||++... .......+.+|++++++++||||+++++++.+++..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 468888999999999999998 467999999998653 2344567899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
||+++|+|.+++.. ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999863 3557899999999999999999999996 99999999999999999999999999986544
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... ....... ...
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~----~~~ 261 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIE-QCDYPPL----PSD 261 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHHHHH-TTCSCCC----CTT
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHHHhh-cccCCCC----ccc
Confidence 322 223456899999999999999999999999999999999999999644221 111111111 1111111 111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.++ ..+.+++.+||+.||++||++.+|++.|+.+..
T Consensus 262 ~~~----~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 262 HYS----EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 222 348889999999999999999999999986544
No 141
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4e-40 Score=348.66 Aligned_cols=252 Identities=22% Similarity=0.280 Sum_probs=206.0
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChh------cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ------GNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45688889999999999999994 57899999998654221 357799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC----CeEEcccCcc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL----NSKISDFGLA 540 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~----~~kl~DfGla 540 (733)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999653 47899999999999999999999996 99999999999999887 7999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccccc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 620 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
+....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||............ .. ... . .+
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i---~~-~~~-~-~~ 238 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI---TS-VSY-D-FD 238 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HT-TCC-C-CC
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---Hh-ccc-c-cC
Confidence 86554322 23457999999999999999999999999999999999999999765544332211 11 000 0 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 621 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 621 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....... ...+.+++.+|++.||++|||+.|+++.
T Consensus 239 ~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111 2348899999999999999999999874
No 142
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.7e-40 Score=347.59 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=204.5
Q ss_pred hcCccccCcccCCCcccEEEcccCC----CcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCeEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLAD----GTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIE-GNQLL 465 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 465 (733)
...|...+.||+|+||.||+|+..+ +..||+|.+... .....+.+.+|+.++++++||||++++++|.+ ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467788999999999999998532 236899998754 33445778999999999999999999999754 56789
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++|+|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999876778999999999999999999999996 99999999999999999999999999986654
Q ss_pred cCcc---cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhC-CCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 546 ENTH---ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSG-RSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 546 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
.... ......||+.|+|||.+.+..++.++||||||+++|||++| ..||...+........ ..+...
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~----- 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQGRRL----- 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH----HTTCCC-----
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH----hcCCCC-----
Confidence 3221 23345678899999999999999999999999999999995 4555444433332211 111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
......+ ..+.+++.+||+.+|.+||++.|+++.|++...
T Consensus 252 ~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 LQPEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0011122 348889999999999999999999999987654
No 143
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-40 Score=364.67 Aligned_cols=247 Identities=25% Similarity=0.419 Sum_probs=204.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35788889999999999999995 479999999986432 12346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999998643 47999999999999999999999986 9999999999999999999999999998655432
Q ss_pred cccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...+........ . .+.. . ....
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i---~-~~~~-~-----~p~~ 238 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI---C-DGIF-Y-----TPQY 238 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHH---H-TTCC-C-----CCTT
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHH---h-cCCc-C-----CCcc
Confidence 2344679999999999988765 78999999999999999999999766544333211 1 1110 0 0111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.+ ..+.+++.+||+.||.+|||+.|+++
T Consensus 239 ~s----~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 LN----PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC----HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 22 34888999999999999999999986
No 144
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-40 Score=352.80 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=206.5
Q ss_pred hhcCccccCcccCCCcccEEEccc------CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 463 (733)
..++|...+.||+|+||.||+|+. .++..||||.+... .......+.+|+.++++++||||+++++++.++..
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 346788899999999999999984 35778999999654 34455678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEE
Q 004732 464 LLLIYEYLENNSLARALFEHR------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKI 534 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl 534 (733)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 999999999999999998543 45899999999999999999999996 999999999999984 446999
Q ss_pred cccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhh
Q 004732 535 SDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 612 (733)
Q Consensus 535 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 612 (733)
+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||++ |+.||..........+.. .
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~----~ 260 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT----S 260 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH----T
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh----c
Confidence 99999975433222 22234568899999999999999999999999999999998 999997655444333221 1
Q ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 613 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
+.... .....+ ..+.+++.+||+.||.+||++.++++.|+.....
T Consensus 261 ~~~~~-----~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 261 GGRMD-----PPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp TCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCC-----CCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 11111 111222 3488899999999999999999999999865443
No 145
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.7e-40 Score=349.12 Aligned_cols=255 Identities=30% Similarity=0.442 Sum_probs=203.9
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEE--EEEEcccc-ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAI--AVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 467 (733)
++|...+.||+|+||.||+|+. .++..+ |||.+... .....+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5778889999999999999995 456644 99988653 233456789999999999 899999999999999999999
Q ss_pred EEccCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCe
Q 004732 468 YEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 532 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~ 532 (733)
|||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997543 47999999999999999999999986 9999999999999999999
Q ss_pred EEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHh
Q 004732 533 KISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKE 611 (733)
Q Consensus 533 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 611 (733)
||+|||+++...... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||............ .
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~----~ 255 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL----P 255 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG----G
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh----h
Confidence 999999997433221 1233457889999999999889999999999999999998 99999766544332211 1
Q ss_pred hCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 612 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
.+.. ...... ....+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 256 ~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 256 QGYR-----LEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GTCC-----CCCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCC-----CCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1110 111112 22458899999999999999999999999986544
No 146
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=351.49 Aligned_cols=266 Identities=26% Similarity=0.398 Sum_probs=208.8
Q ss_pred hcCccccCcccCCCcccEEEccc-----CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC--eE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN--QL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 464 (733)
.++|...+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35678889999999999999973 468899999998766666678999999999999999999999987654 67
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||+++++|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999877778999999999999999999999986 9999999999999999999999999998765
Q ss_pred ccCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC-------cc
Q 004732 545 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG-------KL 615 (733)
Q Consensus 545 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-------~~ 615 (733)
..... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... .... ..... .+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-FMRM---IGNDKQGQMIVFHL 272 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-HHHH---HCTTCCTHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-HHHh---hccccchhhhHHHH
Confidence 43322 123345778899999999988999999999999999999999988432110 0000 00000 00
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.+.+........+......+.+++.+||+.||++||++.|+++.|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0001100001111122345889999999999999999999999998643
No 147
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-40 Score=352.87 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=202.1
Q ss_pred HhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChh-----cHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ-----GNREFINEIGMISALQHPNLVKLYGCCIEGN 462 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 462 (733)
....++|...+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+++++.++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34457899999999999999999995 46899999998653221 1246789999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++||||+++ +|.+++......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 899988777678999999999999999999999997 99999999999999999999999999986
Q ss_pred CcccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
...... ......||+.|+|||.+.+. .++.++|||||||++|||++|..||...+.....................+.
T Consensus 162 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 162 FGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred ccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 644322 23346789999999999764 5899999999999999999999999766554433322211111110000000
Q ss_pred ---------CCCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 ---------NPGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ---------~~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
......+ ......+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000011 1122468899999999999999999999875
No 148
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.9e-39 Score=349.25 Aligned_cols=260 Identities=24% Similarity=0.327 Sum_probs=205.6
Q ss_pred hhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-----CCceeeEeeEEEeCCe
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-----HPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~ 463 (733)
...++|...+.||+|+||+||+|+. .+++.||||++... ......+..|+++++.++ ||||+++++++...+.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 4567899999999999999999994 67899999998643 344567788999999997 9999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC--------------
Q 004732 464 LLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-------------- 528 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~-------------- 528 (733)
.++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccc
Confidence 99999999 999999997543 46999999999999999999999986 999999999999975
Q ss_pred -----------CCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCcc
Q 004732 529 -----------DLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE 597 (733)
Q Consensus 529 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~ 597 (733)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999864432 23467899999999999999999999999999999999999999766
Q ss_pred chhhHHHHHHHHHhhC-----------cccccccC------CCCCCCCHH---------------HHHHHHHHHHHhhcC
Q 004732 598 DMFYLLDWALVLKEQG-----------KLMELVDT------NPGSNFDKE---------------QVMVMINVALLCANA 645 (733)
Q Consensus 598 ~~~~~~~~~~~~~~~~-----------~~~~~~~~------~~~~~~~~~---------------~~~~l~~l~~~c~~~ 645 (733)
+............... .....++. -+....... ....+.+++.+||+.
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 342 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI 342 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence 5444332221111000 00000000 000000111 014577999999999
Q ss_pred CCCCCCCHHHHHH
Q 004732 646 SPTIRPSMSSVLR 658 (733)
Q Consensus 646 ~P~~RPt~~~vl~ 658 (733)
||++|||+.|+++
T Consensus 343 dP~~Rpta~elL~ 355 (360)
T 3llt_A 343 DPTLRPSPAELLK 355 (360)
T ss_dssp SGGGSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
No 149
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-40 Score=372.54 Aligned_cols=253 Identities=25% Similarity=0.331 Sum_probs=206.5
Q ss_pred hhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
...++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|+++++.++|||||++++++.+++..+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 4567899999999999999999995 57999999998653 2234567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 466 LIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999997543 35999999999999999999999996 9999999999999999999999999998665
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhH-HHHHHHHHhhCcccccccCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL-LDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 623 (733)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......... ..
T Consensus 338 ~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~--------- 405 (576)
T 2acx_A 338 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VP--------- 405 (576)
T ss_dssp TTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CC---------
T ss_pred cCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-cc---------
Confidence 4322 2345799999999999998899999999999999999999999965432111 111111111 10
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRP-----SMSSVLR 658 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 658 (733)
..++......+.+++.+|++.||.+|| ++.||++
T Consensus 406 -~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 -EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 011111234588999999999999999 7788864
No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.8e-40 Score=345.17 Aligned_cols=256 Identities=20% Similarity=0.283 Sum_probs=197.0
Q ss_pred cCccc-cCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFAT-DNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~-~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 469 (733)
+.|.+ .+.||+|+||.||+|+ ..+++.||||++..........+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 4789999999999998 557999999999766555667899999999985 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC---eEEcccCccccCccc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGLAKLDEEE 546 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~---~kl~DfGla~~~~~~ 546 (733)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999754 47899999999999999999999996 999999999999998776 999999999765422
Q ss_pred Cc------ccccccccCCCcccHHHHhh-----CCCCccchhHhHHHHHHHHHhCCCCCCccchhh------------HH
Q 004732 547 NT------HISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY------------LL 603 (733)
Q Consensus 547 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~------------~~ 603 (733)
.. .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223569999999999975 558899999999999999999999995442110 00
Q ss_pred HHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 604 DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...... ..+.. ..... .... ....+.+++.+|++.||.+|||+.|+++.
T Consensus 248 ~~~~~i-~~~~~-~~~~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 248 MLFESI-QEGKY-EFPDK-DWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHH-HHCCC-CCCHH-HHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHH-hccCc-ccCch-hccc----CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 001111 11110 00000 0001 12358899999999999999999999874
No 151
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=350.09 Aligned_cols=258 Identities=23% Similarity=0.309 Sum_probs=203.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 466 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45788889999999999999994 6799999999876666667789999999999999999999999873 347899
Q ss_pred EEEccCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 467 IYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
||||+++|+|.+++.. ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999975 4567999999999999999999999996 999999999999999999999999998755
Q ss_pred cccCcc--------cccccccCCCcccHHHHhhCC---CCccchhHhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHh
Q 004732 544 EEENTH--------ISTRVAGTIGYMAPEYAMRGH---LTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKE 611 (733)
Q Consensus 544 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~ 611 (733)
...... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||...... ..... .. .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~-~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL--AV-Q 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH--HH-H
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH--Hh-h
Confidence 322111 112345799999999987543 688999999999999999999999432110 00000 00 0
Q ss_pred hCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 612 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
. .. .. .....+ ...+.+++.+||+.||.+||++.++++.|+...
T Consensus 262 ~-~~-~~---~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 262 N-QL-SI---PQSPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp C-C---C---CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred c-cC-CC---CccccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 0 00 00 011112 235889999999999999999999999998654
No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.5e-40 Score=350.89 Aligned_cols=261 Identities=26% Similarity=0.389 Sum_probs=209.0
Q ss_pred HhhhcCccccCcccCCCcccEEEccc------CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIE 460 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 460 (733)
....++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+++++++ +||||+++++++.+
T Consensus 23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 34567899999999999999999963 456899999997643 33446789999999999 79999999999987
Q ss_pred CC-eEEEEEEccCCCCHHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcE
Q 004732 461 GN-QLLLIYEYLENNSLARALFEHRL---------------KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNV 524 (733)
Q Consensus 461 ~~-~~~lV~e~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Ni 524 (733)
.+ ..++||||+++|+|.+++..... .+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Ni 179 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNI 179 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceE
Confidence 54 58999999999999999975433 2899999999999999999999986 99999999999
Q ss_pred EecCCCCeEEcccCccccCcccCc-ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhH
Q 004732 525 LLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYL 602 (733)
Q Consensus 525 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~ 602 (733)
+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 180 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 180 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred EECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 999999999999999986544322 22334568899999999999999999999999999999998 9999955432211
Q ss_pred HHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 603 LDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
. .... ..+..... .... ...+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 260 ~--~~~~-~~~~~~~~-----~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 260 F--CRRL-KEGTRMRA-----PDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp H--HHHH-HHTCCCCC-----CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H--HHHh-ccCccCCC-----CCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 1111 11111111 1112 234888999999999999999999999998643
No 153
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=351.43 Aligned_cols=261 Identities=21% Similarity=0.333 Sum_probs=199.1
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhc-HHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQG-NREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
++|...+.||+|+||+||+|+. .+++.||||++....... ...+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 4688889999999999999995 478999999986543221 12456799999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCccc
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 550 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 550 (733)
++ |+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 98 5899999877778999999999999999999999996 99999999999999999999999999986543322 2
Q ss_pred ccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccc---cccc------
Q 004732 551 STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM---ELVD------ 620 (733)
Q Consensus 551 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~------ 620 (733)
.....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...+.................. ....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 234568999999999987 568999999999999999999999997766555444333222111100 0000
Q ss_pred ---CCCCCCC----CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 621 ---TNPGSNF----DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 621 ---~~~~~~~----~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+...... .......+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 0011235789999999999999999999986
No 154
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-40 Score=349.03 Aligned_cols=265 Identities=25% Similarity=0.331 Sum_probs=201.7
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhC--CCCceeeEeeEEEeC----Ce
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL--QHPNLVKLYGCCIEG----NQ 463 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~ 463 (733)
...++|...+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.+. ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34568999999999999999999875 899999998543 234556666666655 899999999999987 78
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCCeecCCCCCCcEEecCCCCeEEcccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES-----RIKVVHRDIKATNVLLDKDLNSKISDFG 538 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dik~~Nill~~~~~~kl~DfG 538 (733)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.+||+|||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 99999999999999999654 6899999999999999999999871 1139999999999999999999999999
Q ss_pred ccccCcccCccc---ccccccCCCcccHHHHhhCCCCcc------chhHhHHHHHHHHHhC----------CCCCCccch
Q 004732 539 LAKLDEEENTHI---STRVAGTIGYMAPEYAMRGHLTEK------ADVYSFGIVALEIVSG----------RSNVTKEDM 599 (733)
Q Consensus 539 la~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~Gvil~elltg----------~~p~~~~~~ 599 (733)
+++......... .....||+.|+|||.+.+...+.+ +|||||||++|||++| +.||.....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 997654432221 234579999999999988766665 9999999999999999 666632211
Q ss_pred --hhHHHHHHHHHhhCcccccccCCCCC-CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 600 --FYLLDWALVLKEQGKLMELVDTNPGS-NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 600 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
............ .. ..+.... ....+....+.+++.+||+.||.+|||+.||++.|+++.+
T Consensus 268 ~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 268 SDPSYEDMREIVCI-KK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SSCCHHHHHHHHTT-SC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCchhhhHHHHhh-hc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 111111111111 11 1111111 1122556779999999999999999999999999986554
No 155
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-41 Score=357.21 Aligned_cols=259 Identities=28% Similarity=0.377 Sum_probs=188.1
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHh--CCCCceeeEeeEEEeCC----eEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISA--LQHPNLVKLYGCCIEGN----QLLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 466 (733)
++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.+.. ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57889999999999999999875 899999998643 34567888888887 79999999999998876 7899
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeecCCCCCCcEEecCCCCeEEcccC
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLH--------GESRIKVVHRDIKATNVLLDKDLNSKISDFG 538 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 538 (733)
||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecC
Confidence 99999999999999654 6888999999999999999999 665 9999999999999999999999999
Q ss_pred ccccCcccCccc---ccccccCCCcccHHHHhhC------CCCccchhHhHHHHHHHHHhC----------CCCCCccch
Q 004732 539 LAKLDEEENTHI---STRVAGTIGYMAPEYAMRG------HLTEKADVYSFGIVALEIVSG----------RSNVTKEDM 599 (733)
Q Consensus 539 la~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~elltg----------~~p~~~~~~ 599 (733)
+++......... .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997654433221 2334799999999999776 344689999999999999999 666632211
Q ss_pred h--hHHHHHHHHHhhCcccccccCCCCCC-CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 600 F--YLLDWALVLKEQGKLMELVDTNPGSN-FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 600 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
. ............. ..+..... ...+....+.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 234 SDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp -CCCCC-CHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCccHHHHHHHHHHhh-----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 0 0000000000000 11111111 122556679999999999999999999999999997654
No 156
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.4e-40 Score=345.25 Aligned_cols=255 Identities=26% Similarity=0.373 Sum_probs=204.6
Q ss_pred hcCccccC-cccCCCcccEEEccc---CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 392 TNNFATDN-NIGEGGFGPVYKGLL---ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 392 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
.++|...+ .||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+++++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34666766 999999999999953 357899999987542 22356799999999999999999999999 667789
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 545 (733)
+||||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999999764 46999999999999999999999996 99999999999999999999999999986654
Q ss_pred cCccc--ccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCC
Q 004732 546 ENTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 622 (733)
Q Consensus 546 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (733)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~----- 240 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML----EKGERMG----- 240 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH----HTTCCCC-----
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----HcCCCCC-----
Confidence 33322 223446789999999999889999999999999999999 99999766544433221 1111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 623 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 623 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.+......+.+++.+||+.||.+||++.++++.|+.+.
T Consensus 241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11112335889999999999999999999999998543
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.3e-40 Score=363.80 Aligned_cols=259 Identities=22% Similarity=0.321 Sum_probs=197.4
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC------C
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------N 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 462 (733)
.++|...+.||+|+||+||+|+ ..+|+.||||++... .....+.+.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 4678899999999999999998 557899999998654 334456788999999999999999999999754 4
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++||||++++ |.+.+. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHh---hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 679999999875 655553 35899999999999999999999996 99999999999999999999999999986
Q ss_pred CcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC------c--
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG------K-- 614 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~------~-- 614 (733)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+............... .
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 54422 2345679999999999999999999999999999999999999997765443332211111000 0
Q ss_pred --ccccccCCCC-CC-----------------CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 --LMELVDTNPG-SN-----------------FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 --~~~~~~~~~~-~~-----------------~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+...+. .. ........+.+++.+|++.||++|||+.|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 00 001124568999999999999999999999874
No 158
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-40 Score=347.23 Aligned_cols=261 Identities=26% Similarity=0.424 Sum_probs=187.5
Q ss_pred hhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
...++|...+.||+|+||.||+|+. .+++.||||.+.... ......+.+|++++++++||||+++++++..++..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3456888999999999999999984 578999999986542 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 468 YEYLENNSLARALFE-------HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999863 2446899999999999999999999986 999999999999999999999999999
Q ss_pred ccCcccCc----ccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC-c
Q 004732 541 KLDEEENT----HISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG-K 614 (733)
Q Consensus 541 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~ 614 (733)
........ .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||............ ..... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT--LQNDPPS 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH--HTSSCCC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH--hccCCCc
Confidence 76543221 11234579999999999876 56899999999999999999999999655443322111 11110 0
Q ss_pred cc-ccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 LM-ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ~~-~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ...+......++ ..+.+++.+||+.||.+||++.++++.
T Consensus 247 ~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 011111112222 348889999999999999999999863
No 159
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=350.33 Aligned_cols=243 Identities=21% Similarity=0.332 Sum_probs=201.9
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccCh--------hcHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK--------QGNREFINEIGMISALQHPNLVKLYGCCIEG 461 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 461 (733)
..++|...+.||+|+||.||+|+ ..+++.||||.+..... .....+.+|++++++++||||+++++++.++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 35678899999999999999998 56789999999865421 1224577899999999999999999999999
Q ss_pred CeEEEEEEccCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcc
Q 004732 462 NQLLLIYEYLENN-SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 540 (733)
Q Consensus 462 ~~~~lV~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 540 (733)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 999988654 47999999999999999999999996 999999999999999999999999999
Q ss_pred ccCcccCcccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccc
Q 004732 541 KLDEEENTHISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 619 (733)
Q Consensus 541 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (733)
+....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .....
T Consensus 178 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------~~~~~ 241 (335)
T 3dls_A 178 AYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------VEAAI 241 (335)
T ss_dssp EECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------TTTCC
T ss_pred eECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------Hhhcc
Confidence 86654332 234679999999999988776 88999999999999999999999543210 00001
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 620 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ....++ ..+.+++.+||+.||++|||+.++++.
T Consensus 242 ~--~~~~~~----~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 H--PPYLVS----KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp C--CSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred C--CCcccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 111122 348899999999999999999999885
No 160
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.7e-40 Score=350.48 Aligned_cols=262 Identities=22% Similarity=0.366 Sum_probs=200.1
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 4688889999999999999995 568999999985542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 179 (331)
T 4aaa_A 105 FVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179 (331)
T ss_dssp CCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence 9999999887653 347999999999999999999999996 99999999999999999999999999986544322
Q ss_pred cccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHH------------HhhCccc
Q 004732 550 ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL------------KEQGKLM 616 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~------------~~~~~~~ 616 (733)
......||+.|+|||.+.+. .++.++|||||||++|||++|+.||............... .......
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 22345689999999999875 6899999999999999999999999765543332211111 0000000
Q ss_pred ccccCCCCCCCCH-----HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 617 ELVDTNPGSNFDK-----EQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 617 ~~~~~~~~~~~~~-----~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+........ .....+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111111 123468899999999999999999998763
No 161
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.9e-40 Score=350.20 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=204.5
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEe--------C
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIE--------G 461 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 461 (733)
++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+ .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999995 679999999986542 2234578899999999999999999999987 4
Q ss_pred CeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 462 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 462 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
+..++||||+++ +|.+.+......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 468999999985 788888766678999999999999999999999996 9999999999999999999999999998
Q ss_pred cCcccC---cccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccc-
Q 004732 542 LDEEEN---THISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM- 616 (733)
Q Consensus 542 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 616 (733)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......................
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 654322 122344678999999999976 458999999999999999999999997766554443332221111000
Q ss_pred --cc--------ccCCCCCCCCH-HH------HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 617 --EL--------VDTNPGSNFDK-EQ------VMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 617 --~~--------~~~~~~~~~~~-~~------~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ........... +. ...+.+++.+|++.||.+|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 00000000011 11 2347899999999999999999999874
No 162
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.2e-40 Score=351.02 Aligned_cols=247 Identities=24% Similarity=0.320 Sum_probs=178.9
Q ss_pred cCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEccCCCC
Q 004732 398 DNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYLENNS 475 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gs 475 (733)
.+.||+|+||.||+|+. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999995 57899999998543 3467789999999997 9999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC---CeEEcccCccccCcccCccccc
Q 004732 476 LARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKISDFGLAKLDEEENTHIST 552 (733)
Q Consensus 476 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~DfGla~~~~~~~~~~~~ 552 (733)
|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++....... ...
T Consensus 93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 167 (325)
T 3kn6_A 93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK 167 (325)
T ss_dssp HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence 99999765 47999999999999999999999986 99999999999998765 799999999986544322 233
Q ss_pred ccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhh----HHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 553 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY----LLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 553 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ........ ..+... ......
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i-~~~~~~------~~~~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKGDFS------FEGEAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH-TTTCCC------CCSHHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH-HcCCCC------CCcccc
Confidence 4568999999999999999999999999999999999999996543210 11111111 111100 000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
......+.+++.+|++.||.+|||+.|+++.
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1123458899999999999999999998754
No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=338.70 Aligned_cols=252 Identities=27% Similarity=0.377 Sum_probs=199.7
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEcc
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 471 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 471 (733)
+.|....+||+|+||.||+|+ ..+++.||||.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 345566799999999999999 4678999999987665555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC-CCCeEEcccCccccCcccCc
Q 004732 472 ENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 472 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~~~~~~~ 548 (733)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999997543 35678899999999999999999986 999999999999987 89999999999986543222
Q ss_pred ccccccccCCCcccHHHHhhCC--CCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGH--LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..........+.... ... .+.....
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~-----~~~~~~~ 250 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKV-----HPEIPES 250 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH--HCC-----CCCCCTT
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc--ccc-----ccccccc
Confidence 223457899999999997653 899999999999999999999999544322211111111 011 1111112
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ...+.+++.+||+.||++||++.++++.
T Consensus 251 ~----~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 251 M----SAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp S----CHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred C----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2 2358889999999999999999999763
No 164
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.2e-40 Score=341.03 Aligned_cols=250 Identities=29% Similarity=0.441 Sum_probs=198.4
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC-CeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG-NQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~ 470 (733)
.++|+..+.||+|+||.||+|+.. |+.||||.+.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457888899999999999999874 8899999987543 446789999999999999999999997655 478999999
Q ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 471 LENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 471 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999999997543 23899999999999999999999986 9999999999999999999999999997544321
Q ss_pred cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCC
Q 004732 550 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 628 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (733)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+... ......
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~----~~~~~~-----~~~~~~- 239 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----EKGYKM-----DAPDGC- 239 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH----TTTCCC-----CCCTTC-
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hcCCCC-----CCcccC-
Confidence 23457889999999999999999999999999999998 99999665443332211 111111 111122
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 629 KEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 629 ~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
...+.+++.+||+.||.+||++.|+++.|+.+.
T Consensus 240 ---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 240 ---PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 235888999999999999999999999998643
No 165
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-40 Score=355.06 Aligned_cols=254 Identities=23% Similarity=0.297 Sum_probs=203.3
Q ss_pred hcCccccCcccCCCcccEEEccc----CCCcEEEEEEccccC----hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCC
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGN 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 462 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++++ +||||+++++++.++.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46788999999999999999985 478999999986532 12335677899999999 6999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++||||+++|+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999754 47999999999999999999999986 99999999999999999999999999987
Q ss_pred CcccCcccccccccCCCcccHHHHhh--CCCCccchhHhHHHHHHHHHhCCCCCCccchhh-HHHHHHHHHhhCcccccc
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVLKEQGKLMELV 619 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 619 (733)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------ 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------ 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC------
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC------
Confidence 65544444455789999999999986 347899999999999999999999995432211 111111111110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHHh
Q 004732 620 DTNPGSNFDKEQVMVMINVALLCANASPTIRP-----SMSSVLRML 660 (733)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~~L 660 (733)
+ .++......+.+++.+||+.||.+|| ++.|+++..
T Consensus 283 -~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 -P----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -C----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -C----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 11112234578899999999999999 888887653
No 166
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.5e-40 Score=378.93 Aligned_cols=247 Identities=27% Similarity=0.373 Sum_probs=199.0
Q ss_pred CcccCCCcccEEEccc---CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEccCC
Q 004732 399 NNIGEGGFGPVYKGLL---ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 473 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 473 (733)
+.||+|+||+||+|.+ ..++.||||+++... ....++|.+|++++++++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 4799999999999964 356789999997642 334578999999999999999999999996 4568999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc--cc
Q 004732 474 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH--IS 551 (733)
Q Consensus 474 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~ 551 (733)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++........ ..
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999654 47999999999999999999999996 999999999999999999999999999876543322 22
Q ss_pred cccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHH
Q 004732 552 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 630 (733)
Q Consensus 552 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (733)
....||+.|+|||++.+..++.++|||||||++|||++ |+.||............ ..+..... +..
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i----~~~~~~~~---------p~~ 596 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML----EKGERMGC---------PAG 596 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH----HTTCCCCC---------CTT
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcCCCCCC---------CCC
Confidence 33457889999999999999999999999999999998 99999766554433221 12221111 111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 631 QVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 631 ~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
....+.+++..||+.||++||++.+|++.|+..
T Consensus 597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 224588999999999999999999999999853
No 167
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.1e-40 Score=344.01 Aligned_cols=254 Identities=24% Similarity=0.419 Sum_probs=201.9
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
..++|...+.||+|+||.||+|+. .+++.||+|.+..........+.+|+++++.++||||+++++++.+++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 346788999999999999999995 4689999999977666667889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-Q 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc-c
Confidence 99999999999876678999999999999999999999986 9999999999999999999999999976432211 1
Q ss_pred cccccccCCCcccHHHHh-----hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 550 ISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
......||+.|+|||.+. ...++.++||||||+++|||++|+.||...+....... .... ......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~-~~~~~~----- 243 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKS-DPPTLL----- 243 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH---HHHS-CCCCCS-----
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH---Hhcc-CCcccC-----
Confidence 123356899999999984 56789999999999999999999999966544332211 1111 111110
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+......+.+++.+||+.||.+|||+.++++.
T Consensus 244 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 --TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111123358899999999999999999998763
No 168
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.6e-40 Score=344.83 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=198.7
Q ss_pred hcCccccCcccCCCcccEEEcccC--CCc--EEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA--DGT--AIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
.++|...+.||+|+||.||+|++. +++ .||||.+... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 356788899999999999999843 333 6899988654 2334578899999999999999999999998765 8
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++|+||+++|+|.+++......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876667999999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCcc--cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 545 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 545 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
..... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...+........ ........
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~~~---- 245 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGERLP---- 245 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HTSCCCCC----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHH---HccCCCCC----
Confidence 43322 2234567889999999999889999999999999999999 99999766544333211 11111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 663 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 663 (733)
.... ....+.+++.+||+.||.+||++.++++.|++.
T Consensus 246 -~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 246 -RPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp -CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 1112 234588999999999999999999999999854
No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-39 Score=338.94 Aligned_cols=250 Identities=24% Similarity=0.321 Sum_probs=201.3
Q ss_pred cCccccCcccCCCcccEEEcccC-CCcEEEEEEccccCh------hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
++|...+.||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.++...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46788899999999999999954 789999999865421 13578999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC----CeEEcccCccc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL----NSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~----~~kl~DfGla~ 541 (733)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999654 47999999999999999999999986 99999999999998877 79999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||............ . .... . ...
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~-~~~~-~-~~~ 232 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI---S-AVNY-D-FDE 232 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---H-TTCC-C-CCH
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh---H-hccc-C-Ccc
Confidence 6544322 23456899999999999889999999999999999999999999765543332211 0 0000 0 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
..... ....+.+++.+||+.||++||++.|+++
T Consensus 233 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 233 EYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00001 1235889999999999999999999986
No 170
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=353.40 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=206.0
Q ss_pred HHhhhcCccccCcccCCCcccEEEcc------cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC---CCceeeEeeEE
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGL------LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ---HPNLVKLYGCC 458 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 458 (733)
++...++|...+.||+|+||+||+|+ ..+++.||||++... ...++.+|+++++.++ |+||+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 44556789999999999999999993 557899999999654 3457788888888887 99999999999
Q ss_pred EeCCeEEEEEEccCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC------
Q 004732 459 IEGNQLLLIYEYLENNSLARALFE----HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK------ 528 (733)
Q Consensus 459 ~~~~~~~lV~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~------ 528 (733)
..++..++||||+++|+|.+++.. ....+++..++.++.||++||+|||+.+ ||||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcc
Confidence 999999999999999999999974 3457999999999999999999999986 999999999999998
Q ss_pred -----CCCeEEcccCccccCcc-cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhH
Q 004732 529 -----DLNSKISDFGLAKLDEE-ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL 602 (733)
Q Consensus 529 -----~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~ 602 (733)
++.+||+|||+|+.... ..........||++|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-- 291 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-- 291 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT--
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC--
Confidence 89999999999975432 2222345567999999999999999999999999999999999999999543221
Q ss_pred HHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCC-CCHHHHHHHhccCcc
Q 004732 603 LDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIR-PSMSSVLRMLECGVD 665 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R-Pt~~~vl~~L~~~~~ 665 (733)
. ..+......... ...+.+++..|++.+|.+| |++.++.+.|+.+..
T Consensus 292 -----------~--~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 292 -----------E--CKPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp -----------E--EEECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred -----------c--eeechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0 001111111112 3346778889999999998 578888888885543
No 171
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.1e-40 Score=350.98 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=198.6
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... .+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45788889999999999999994 5789999999965432 245688888887 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC----CCeEEcccCccccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD----LNSKISDFGLAKLDEE 545 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~----~~~kl~DfGla~~~~~ 545 (733)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+..+ +.+||+|||+++....
T Consensus 97 ~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999999654 47999999999999999999999996 9999999999998543 3499999999986554
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................ .+... . ..
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~-~~~~~-~-~~---- 244 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG-SGKFS-L-SG---- 244 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH-HCCCC-C-CS----
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc-cCCcc-c-Cc----
Confidence 322 2334678999999999988889999999999999999999999996532211111111111 11111 0 00
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.+.......+.+++.+|++.||++||++.|+++
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111112335889999999999999999999975
No 172
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.9e-40 Score=338.28 Aligned_cols=257 Identities=26% Similarity=0.393 Sum_probs=205.1
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLLL 466 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 466 (733)
.++|...+.||+|+||.||+|+. .+|+.||+|.+... .....+.+.+|++++++++||||+++++++.+ +...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 45788899999999999999995 57899999998654 23445678999999999999999999999865 568999
Q ss_pred EEEccCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 467 IYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGES--RIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999743 345999999999999999999999874 1239999999999999999999999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...+........ ..+.....
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i----~~~~~~~~--- 236 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI----REGKFRRI--- 236 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHTCCCCC---
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHH----hhcccccC---
Confidence 6544322 223456899999999999989999999999999999999999999766543332211 11221111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 662 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 662 (733)
...+ ...+.+++.+||+.||++||++.||++.+..
T Consensus 237 --~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 --PYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp --CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred --Cccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1122 2358899999999999999999999987763
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.4e-40 Score=348.84 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=194.5
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccCh--hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||+||+|+ ..+++.||||++..... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 4578888999999999999998 55789999999965432 22456789999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-----CCCCeEEcccCccccC
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-----KDLNSKISDFGLAKLD 543 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-----~~~~~kl~DfGla~~~ 543 (733)
||+++ +|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 113 e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 113 EYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp ECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred ecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99985 9999987553 6999999999999999999999996 99999999999994 4556999999999865
Q ss_pred cccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccc---cc-
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM---EL- 618 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~- 618 (733)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...................... ..
T Consensus 188 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 188 GIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred CCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 43322 23345689999999999875 48999999999999999999999997665444332221111100000 00
Q ss_pred -----ccCCCC-CCCCHH------HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 619 -----VDTNPG-SNFDKE------QVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 619 -----~~~~~~-~~~~~~------~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
....+. ...... ....+.+++.+|++.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000 000000 1245789999999999999999999986
No 174
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.7e-39 Score=349.80 Aligned_cols=256 Identities=21% Similarity=0.374 Sum_probs=206.3
Q ss_pred HHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh--------hcHHHHHHHHHHHHhC-CCCceeeEeeE
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--------QGNREFINEIGMISAL-QHPNLVKLYGC 457 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~~ 457 (733)
.....++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.+++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 344557899999999999999999996 4799999999865421 1135678899999999 79999999999
Q ss_pred EEeCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEccc
Q 004732 458 CIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 537 (733)
Q Consensus 458 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 537 (733)
+......++||||+++++|.+++... ..+++..+..++.||+.||.|||+.| |+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEec
Confidence 99999999999999999999999754 47999999999999999999999986 999999999999999999999999
Q ss_pred CccccCcccCcccccccccCCCcccHHHHhhC------CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh
Q 004732 538 GLAKLDEEENTHISTRVAGTIGYMAPEYAMRG------HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE 611 (733)
Q Consensus 538 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 611 (733)
|++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||............. .
T Consensus 245 G~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~---~ 319 (365)
T 2y7j_A 245 GFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM---E 319 (365)
T ss_dssp TTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H
T ss_pred CcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---h
Confidence 99986654322 2446799999999998743 58889999999999999999999997655443332211 1
Q ss_pred hCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 612 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
+... ...+. .... ...+.+++.+|++.||++||++.|+++.
T Consensus 320 -~~~~-~~~~~-~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 320 -GQYQ-FSSPE-WDDR----SSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -TCCC-CCHHH-HSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCCC-CCCcc-cccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1100 00000 0011 2348899999999999999999999873
No 175
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.8e-40 Score=353.27 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=203.7
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+. .+++.||+|.+... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 46788999999999999999995 47899999998764 33445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999999754 3689999999999999999999985 5 999999999999999999999999999754322
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhh----------------
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ---------------- 612 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~---------------- 612 (733)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..............
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 123457999999999999999999999999999999999999999655433221110000000
Q ss_pred ----------Ccccc----cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 613 ----------GKLME----LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 613 ----------~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+ .................+.+++.+||+.||++|||+.|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000 000000000011123358899999999999999999999763
No 176
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=349.07 Aligned_cols=267 Identities=27% Similarity=0.401 Sum_probs=198.1
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHH--HHhCCCCceeeEeeEEEe-----CCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGM--ISALQHPNLVKLYGCCIE-----GNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~ 464 (733)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46788899999999999999976 68999999986432 3445555555 445899999999987653 2357
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC------CCCeecCCCCCCcEEecCCCCeEEcccC
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES------RIKVVHRDIKATNVLLDKDLNSKISDFG 538 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~Dik~~Nill~~~~~~kl~DfG 538 (733)
++||||+++|+|.+++... ..++..+..++.|+++||+|||+.. ..+|+||||||+|||++.++.+||+|||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 8999999999999999754 4589999999999999999999881 1139999999999999999999999999
Q ss_pred ccccCcccC-------cccccccccCCCcccHHHHhh-------CCCCccchhHhHHHHHHHHHhCCCCCCccchh----
Q 004732 539 LAKLDEEEN-------THISTRVAGTIGYMAPEYAMR-------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMF---- 600 (733)
Q Consensus 539 la~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~---- 600 (733)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998654322 112234579999999999976 35677999999999999999998877332110
Q ss_pred -----------hHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004732 601 -----------YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 667 (733)
Q Consensus 601 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 667 (733)
...++............+.. ...........+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 00111111111111111111 11112335567999999999999999999999999999765543
No 177
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.2e-40 Score=354.64 Aligned_cols=269 Identities=23% Similarity=0.352 Sum_probs=203.9
Q ss_pred hhhHHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccCh-----------hcHHHHHHHHHHHHhCCCCceee
Q 004732 385 YLQIKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-----------QGNREFINEIGMISALQHPNLVK 453 (733)
Q Consensus 385 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~ 453 (733)
..++....++|...+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 4567888999999999999999999999987899999999854321 12367899999999999999999
Q ss_pred EeeEEEeC-----CeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC
Q 004732 454 LYGCCIEG-----NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK 528 (733)
Q Consensus 454 l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~ 528 (733)
+++++... ...++||||++ |+|.+++......+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcC
Confidence 99998653 36899999998 6888888876678999999999999999999999996 999999999999999
Q ss_pred CCCeEEcccCccccCcccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHH
Q 004732 529 DLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWAL 607 (733)
Q Consensus 529 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~ 607 (733)
++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999997543322 2234578999999999987 679999999999999999999999997665444333222
Q ss_pred HHHhhCccc---------------ccccCCCCCC---CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 608 VLKEQGKLM---------------ELVDTNPGSN---FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 608 ~~~~~~~~~---------------~~~~~~~~~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
......... ......+... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111111100 0000000000 001112358899999999999999999999864
No 178
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-39 Score=339.15 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=204.8
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 35678889999999999999995 46889999998653 233456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999988654 47999999999999999999999996 9999999999999999999999999998654322
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... . .. .... . .....
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~-~~-~~~~-~-----~~~~~ 238 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--R-IK-KNEY-S-----IPKHI 238 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--H-HH-TTCC-C-----CCTTS
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--H-Hh-hccC-C-----Ccccc
Confidence 2 2234678999999999998889999999999999999999999997654432221 1 11 1110 0 11112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+.+++.+||+.||++||++.|+++.
T Consensus 239 ----~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 239 ----NPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2347889999999999999999998753
No 179
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.9e-40 Score=339.04 Aligned_cols=247 Identities=26% Similarity=0.419 Sum_probs=203.5
Q ss_pred hcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE---------- 460 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 460 (733)
.++|...+.||+|+||.||+|+.. +|+.||+|.+.... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457888999999999999999954 79999999986543 356789999999999999999999864
Q ss_pred ------CCeEEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeE
Q 004732 461 ------GNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSK 533 (733)
Q Consensus 461 ------~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~k 533 (733)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEE
Confidence 44589999999999999999743 457999999999999999999999986 99999999999999999999
Q ss_pred EcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC
Q 004732 534 ISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 534 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
|+|||+++....... .....||+.|+|||.+.+..++.++||||||+++|||++|..|+..... +.... ...
T Consensus 163 l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~~-~~~ 234 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-----FFTDL-RDG 234 (284)
T ss_dssp ECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-----HHHHH-HTT
T ss_pred ECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-----HHHHh-hcc
Confidence 999999986654322 2345689999999999998999999999999999999999988732211 11111 111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
. ....++ ..+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 235 ~--------~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 235 I--------ISDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp C--------CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred c--------ccccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 1 111222 247889999999999999999999999986544
No 180
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1e-39 Score=365.65 Aligned_cols=249 Identities=23% Similarity=0.325 Sum_probs=203.0
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++.+....++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 457899999999999999999995 579999999986532 2345678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 467 IYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999999753 346999999999999999999999996 999999999999999999999999999865
Q ss_pred cccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhhCcccccccCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKLMELVDTN 622 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 622 (733)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........... ...
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~-~~~------- 410 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAV------- 410 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH-CCC-------
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh-ccc-------
Confidence 54322 233468999999999999999999999999999999999999999654221 11111111111 110
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 004732 623 PGSNFDKEQVMVMINVALLCANASPTIRPSMS 654 (733)
Q Consensus 623 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 654 (733)
.++......+.+++.+|++.||++||++.
T Consensus 411 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 411 ---TYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ---CCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 11112234588899999999999999763
No 181
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=341.16 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=201.9
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
..++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 456788999999999999999985 468999999986543 34678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++++|.+++......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 99999999999766678999999999999999999999986 99999999999999999999999999976544322
Q ss_pred cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCH
Q 004732 550 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 629 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (733)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .... ...... ..+.
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~-~~~~~~-------~~~~ 249 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIPT-NPPPTF-------RKPE 249 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHH-SCCCCC-------SSGG
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhc-CCCccc-------CCcc
Confidence 2234578999999999998899999999999999999999999996554332211 1111 111000 0111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 630 EQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 630 ~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.....+.+++.+||+.||.+||++.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12235889999999999999999999976
No 182
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.5e-39 Score=338.50 Aligned_cols=249 Identities=29% Similarity=0.456 Sum_probs=206.9
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.+.|...+.||+|+||.||+|+ ..+++.||||.+.... ....+.+.+|+.+++.++||||+++++++.++...++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 3467888999999999999998 4578999999986542 3445789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 549 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 549 (733)
|+++++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999999854 47899999999999999999999996 99999999999999999999999999986554322
Q ss_pred cccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCH
Q 004732 550 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 629 (733)
Q Consensus 550 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (733)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||............ ...... .....++
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~-----~~~~~~~- 244 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI----PKNNPP-----TLEGNYS- 244 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCC-----CCCSSCC-
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh----hcCCCC-----CCccccC-
Confidence 223467899999999999999999999999999999999999999665443332211 111111 1112222
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 630 EQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 630 ~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
..+.+++.+||+.||.+|||+.++++.
T Consensus 245 ---~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 245 ---KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 348899999999999999999999764
No 183
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=350.64 Aligned_cols=262 Identities=21% Similarity=0.327 Sum_probs=198.6
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN------ 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 462 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++..+.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35788889999999999999994 67999999998553 2334567889999999999999999999998653
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 8899999875 46899999999999999999999996 99999999999999999999999999986
Q ss_pred CcccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc------
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL------ 615 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 615 (733)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.................
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 5432 234678999999999987 67999999999999999999999999766544433222111100000
Q ss_pred --------cccccCCCC---CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--hccC
Q 004732 616 --------MELVDTNPG---SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM--LECG 663 (733)
Q Consensus 616 --------~~~~~~~~~---~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~--L~~~ 663 (733)
...+..... ..........+.+++.+|++.||++|||+.|+++. ++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000000 00011123458899999999999999999999873 4443
No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.3e-40 Score=356.35 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=189.7
Q ss_pred cCcccc-CcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHH-hCCCCceeeEeeEEEe----CCeEE
Q 004732 393 NNFATD-NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMIS-ALQHPNLVKLYGCCIE----GNQLL 465 (733)
Q Consensus 393 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~ 465 (733)
++|... +.||+|+||+||+|+. .+|+.||||++... ..+.+|++++. ..+||||++++++|.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 455554 6899999999999984 57899999998532 45678888874 4589999999999876 56789
Q ss_pred EEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEEcccCccc
Q 004732 466 LIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl~DfGla~ 541 (733)
+|||||++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999997543 46999999999999999999999986 999999999999998 7889999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..................+.. ....+
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~-~~~~~ 289 (400)
T 1nxk_A 213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EFPNP 289 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC-CCCTT
T ss_pred ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc-cCCCc
Confidence 654322 224567899999999998889999999999999999999999999654322110000000011111 00000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
..... ...+.+++.+||+.||++|||+.|+++.
T Consensus 290 -~~~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 -EWSEV----SEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -TTTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -ccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112 2358899999999999999999999874
No 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.7e-39 Score=345.87 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=205.0
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35678889999999999999995 46889999998653 233456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988654 47999999999999999999999996 9999999999999999999999999998654332
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........... ... ... ......
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~-~~~------~~~~~~ 264 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR---IKK-NEY------SIPKHI 264 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---HHH-TCC------CCCTTS
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH---Hhc-CCC------CCCccC
Confidence 2 22346799999999999998999999999999999999999999976543332211 111 110 011112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+ ..+.+++.+||+.||++||++.|+++
T Consensus 265 ~----~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 265 N----PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp C----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred C----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2 34788999999999999999999876
No 186
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-39 Score=342.52 Aligned_cols=251 Identities=22% Similarity=0.361 Sum_probs=203.4
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEc
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 470 (733)
.++|...+.||+|+||.||+|+. .+|+.||+|.+..........+.+|++++++++||||+++++++.++...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 35678889999999999999994 57899999999765444456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCcccC
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~~~~ 547 (733)
+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 9999999998654 37899999999999999999999986 9999999999999 78889999999999754432
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||............ .. +.. .. ... .
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i---~~-~~~-~~-~~~----~ 230 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI---KE-GYY-EF-ESP----F 230 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HH-CCC-CC-CTT----T
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---Hc-CCC-CC-Ccc----c
Confidence 223356899999999999888999999999999999999999999765544333211 11 111 00 001 1
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.......+.+++.+|++.||++||++.|+++.
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123458899999999999999999999863
No 187
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.9e-39 Score=337.16 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=203.8
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+++.||||.+.... ......+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 35788889999999999999985 467899999985431 22346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999754 36899999999999999999999986 9999999999999999999999999987544322
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 627 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (733)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||........... ... .. .......
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~-~~------~~~~~~~ 235 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR---IVN-VD------LKFPPFL 235 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---HHT-TC------CCCCTTS
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH---Hhc-cc------cCCCCcC
Confidence 2345789999999999998999999999999999999999999966544332211 111 10 0111112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 628 DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 628 ~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...+.+++.+|++.||.+||++.++++
T Consensus 236 ----~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 236 ----SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 235889999999999999999999976
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-39 Score=353.73 Aligned_cols=260 Identities=21% Similarity=0.306 Sum_probs=197.7
Q ss_pred HhhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC------
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG------ 461 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 461 (733)
....++|...+.||+|+||+||+|+ ..+|+.||||++..... ...+|+++++.++|||||+++++|...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999998 56899999999865422 234799999999999999999998543
Q ss_pred --------------------------------CeEEEEEEccCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHH
Q 004732 462 --------------------------------NQLLLIYEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYL 506 (733)
Q Consensus 462 --------------------------------~~~~lV~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~L 506 (733)
...++||||++ |+|.+.+. .....+++..+..++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 58877775 3456899999999999999999999
Q ss_pred HcCCCCCeecCCCCCCcEEec-CCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHH
Q 004732 507 HGESRIKVVHRDIKATNVLLD-KDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVA 584 (733)
Q Consensus 507 H~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil 584 (733)
|+.| |+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9986 99999999999998 688999999999986544332 2345789999999998875 499999999999999
Q ss_pred HHHHhCCCCCCccchhhHHHHHHHHHhhCcc----------cccccCCCCCC-----CCHHHHHHHHHHHHHhhcCCCCC
Q 004732 585 LEIVSGRSNVTKEDMFYLLDWALVLKEQGKL----------MELVDTNPGSN-----FDKEQVMVMINVALLCANASPTI 649 (733)
Q Consensus 585 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~ 649 (733)
|||++|+.||...+................. .+..-+..... ++......+.+++.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999766554433322211111100 00000000000 11112335889999999999999
Q ss_pred CCCHHHHHH
Q 004732 650 RPSMSSVLR 658 (733)
Q Consensus 650 RPt~~~vl~ 658 (733)
|||+.|+++
T Consensus 313 R~t~~e~l~ 321 (383)
T 3eb0_A 313 RINPYEAMA 321 (383)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhc
Confidence 999999975
No 189
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.5e-39 Score=335.49 Aligned_cols=244 Identities=24% Similarity=0.386 Sum_probs=198.7
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+++.||||.+... .......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 46788999999999999999995 47999999998753 233456788999999999 999999999999999999999
Q ss_pred EEccCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC---------------
Q 004732 468 YEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD--------------- 529 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~--------------- 529 (733)
|||+++|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999743 256899999999999999999999996 9999999999999844
Q ss_pred ----CCeEEcccCccccCcccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHH
Q 004732 530 ----LNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLD 604 (733)
Q Consensus 530 ----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~ 604 (733)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|..|+.......
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--- 238 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH--- 238 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH---
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH---
Confidence 479999999998654432 23589999999999876 56789999999999999999988775443211
Q ss_pred HHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 605 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ..+.... ....++ ..+.+++.+||+.||++|||+.|+++.
T Consensus 239 --~~--~~~~~~~-----~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 --EI--RQGRLPR-----IPQVLS----QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --HH--HTTCCCC-----CSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --HH--HcCCCCC-----CCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11 1111111 111222 348899999999999999999999764
No 190
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-39 Score=347.70 Aligned_cols=262 Identities=27% Similarity=0.353 Sum_probs=206.5
Q ss_pred hhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHh--CCCCceeeEeeEEEeCC----e
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISA--LQHPNLVKLYGCCIEGN----Q 463 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 463 (733)
...++|...+.||+|+||.||+|+. +|+.||||.+... ....+.+|++++.. ++||||+++++++.... .
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3456889999999999999999987 4899999998643 34678889999887 78999999999998876 7
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeecCCCCCCcEEecCCCCeEEc
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLH--------GESRIKVVHRDIKATNVLLDKDLNSKIS 535 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dik~~Nill~~~~~~kl~ 535 (733)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEEC
T ss_pred eEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEE
Confidence 89999999999999999753 6899999999999999999999 664 9999999999999999999999
Q ss_pred ccCccccCcccCcc---cccccccCCCcccHHHHhhCC------CCccchhHhHHHHHHHHHhC----------CCCCCc
Q 004732 536 DFGLAKLDEEENTH---ISTRVAGTIGYMAPEYAMRGH------LTEKADVYSFGIVALEIVSG----------RSNVTK 596 (733)
Q Consensus 536 DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~Gvil~elltg----------~~p~~~ 596 (733)
|||+++........ ......||+.|+|||.+.+.. ++.++|||||||++|||++| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 99999865543322 234457999999999997652 33689999999999999999 778844
Q ss_pred cch--hhHHHHHHHHHhhCcccccccCCCCC-CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 597 EDM--FYLLDWALVLKEQGKLMELVDTNPGS-NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 597 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
... .....+......... .+.... ....+....+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 270 LVPSDPSVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TSCSSCCHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCcccHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 321 111222221111111 111111 1123556679999999999999999999999999986543
No 191
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.7e-39 Score=362.80 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=199.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||+||+|+. .++..||||++.... ......+.+|+++++.++|||||+++++|.++...++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 34688889999999999999994 578999999986542 233567899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC---CCeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD---LNSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~DfGla~~~~~ 545 (733)
|||++|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.. +.+||+|||+++....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988654 47999999999999999999999996 9999999999999764 4599999999987654
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. ......||+.|+|||++. ..++.++||||+||++|+|++|+.||............. .+... .......
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~~~~~--~~~~~~~ 262 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE----KGKYT--FDSPEWK 262 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HTCCC--CCSGGGT
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCC--CCchhcc
Confidence 32 234467999999999886 569999999999999999999999997765544432221 11110 0000011
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.. ...+.+++.+||+.||.+|||+.|+++
T Consensus 263 ~~----s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 263 NV----SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cC----CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 12 234889999999999999999999975
No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=351.18 Aligned_cols=260 Identities=23% Similarity=0.317 Sum_probs=191.2
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEe--------
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIE-------- 460 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-------- 460 (733)
...+|...+.||+|+||.||+|+ ..+++.||||++........+.+.+|+.+++++. ||||+++++++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 34578889999999999999999 4578999999987666666678999999999996 9999999999953
Q ss_pred CCeEEEEEEccCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccC
Q 004732 461 GNQLLLIYEYLENNSLARALFE--HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 538 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 538 (733)
....++||||+. |+|.+++.. ....+++.+++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence 345899999996 789998864 4457999999999999999999999874 349999999999999999999999999
Q ss_pred ccccCcccCccc-----------ccccccCCCcccHHHH---hhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHH
Q 004732 539 LAKLDEEENTHI-----------STRVAGTIGYMAPEYA---MRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLD 604 (733)
Q Consensus 539 la~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~ 604 (733)
+++......... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||..........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 263 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN 263 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc
Confidence 998765432211 1135689999999998 56678999999999999999999999996543322111
Q ss_pred HHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccccc
Q 004732 605 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVLD 668 (733)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~ 668 (733)
. . ......... ...+.+++.+||+.||.+||++.|+++.|+.......
T Consensus 264 -------~-~----~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 264 -------G-K----YSIPPHDTQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------CCCCTTCCS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -------C-c----ccCCccccc----chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0 0 000011111 1237789999999999999999999999997665443
No 193
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.1e-40 Score=346.82 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=202.1
Q ss_pred HhhhcCcccc-CcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCe
Q 004732 389 KAATNNFATD-NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 389 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 463 (733)
+...+.|... +.||+|+||.||+|+. .+|+.||||++... .......+.+|+.+++.++ ||||+++++++.+++.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3444556665 8899999999999984 57899999998654 2334578899999999994 6999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEEcccCc
Q 004732 464 LLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGL 539 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl~DfGl 539 (733)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999988633 457999999999999999999999996 999999999999998 78999999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccc
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 619 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (733)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... ......
T Consensus 181 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~--~~~~~~---- 252 (327)
T 3lm5_A 181 SRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS--QVNVDY---- 252 (327)
T ss_dssp CEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCC----
T ss_pred ccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH--hccccc----
Confidence 986644322 234679999999999999999999999999999999999999997665433322111 100000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 620 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ..........+.+++.+||+.||.+|||+.|+++.
T Consensus 253 ~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 253 S----EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp C----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C----chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 01111123348889999999999999999999764
No 194
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-39 Score=375.52 Aligned_cols=258 Identities=26% Similarity=0.374 Sum_probs=207.6
Q ss_pred hhhcCccccCcccCCCcccEEEcccC----CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 464 (733)
...++|...+.||+|+||.||+|+.. .+..||||.+... .....+.|.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34567889999999999999999853 2467999998754 3334467999999999999999999999985 4568
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||+++|+|.+++......+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999999877778999999999999999999999986 9999999999999999999999999998765
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |..||............. .+.....
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~----~~~~~~~----- 613 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE----NGERLPM----- 613 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH----HTCCCCC-----
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH----cCCCCCC-----
Confidence 544333444567889999999999999999999999999999997 999997665444333221 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 664 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 664 (733)
.... ...+.+++.+||+.||.+||++.++++.|+.+.
T Consensus 614 ~~~~----~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 614 PPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Cccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1112 235889999999999999999999999998643
No 195
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.1e-39 Score=363.08 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=203.4
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||+||+|+. .+++.||||++... .......+.+|++++++++|||||++++++.++...++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 35688889999999999999994 57899999998543 2334578899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec---CCCCeEEcccCccccCcc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD---KDLNSKISDFGLAKLDEE 545 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~---~~~~~kl~DfGla~~~~~ 545 (733)
||+.+|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999988754 47999999999999999999999996 99999999999995 456799999999986544
Q ss_pred cCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC
Q 004732 546 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 546 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...+......... .+.... +...
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~~~~~~--~~~~-- 245 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE----TGKYAF--DLPQ-- 245 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HTCCCS--CSGG--
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCC--CCcc--
Confidence 32 2334579999999999865 69999999999999999999999997766554433221 111110 0000
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.......+.+++.+||+.||.+|||+.|+++.
T Consensus 246 --~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 --WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01122358899999999999999999999874
No 196
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5e-40 Score=360.54 Aligned_cols=253 Identities=22% Similarity=0.347 Sum_probs=191.5
Q ss_pred hhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC--------hhcHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--------KQGNREFINEIGMISALQHPNLVKLYGCCIE 460 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 460 (733)
...++|...+.||+|+||.||+|. ..+++.||||.+.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 456789999999999999999998 4578999999986431 111235789999999999999999999975
Q ss_pred CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC---CeEEccc
Q 004732 461 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKISDF 537 (733)
Q Consensus 461 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~Df 537 (733)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred cCceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeec
Confidence 55689999999999999988543 47999999999999999999999986 99999999999997544 5999999
Q ss_pred CccccCcccCcccccccccCCCcccHHHHhh---CCCCccchhHhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhhC
Q 004732 538 GLAKLDEEENTHISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQG 613 (733)
Q Consensus 538 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~ 613 (733)
|+++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ...... ..+
T Consensus 287 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i----~~~ 360 (419)
T 3i6u_A 287 GHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----TSG 360 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH----HTT
T ss_pred ccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH----hcC
Confidence 9998765432 2345679999999999853 56889999999999999999999999543221 111111 111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....... ... .....+.+++.+||+.||++||++.|+++.
T Consensus 361 ~~~~~~~--~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 KYNFIPE--VWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCCHH--HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCch--hhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1100000 000 112358899999999999999999999874
No 197
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.7e-40 Score=356.96 Aligned_cols=241 Identities=14% Similarity=0.129 Sum_probs=189.9
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHH---HHHHhCCCCceeeEe-------e
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEI---GMISALQHPNLVKLY-------G 456 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~ 456 (733)
..++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 456788899999999999999995 67999999998642 333457889999 555666899999998 6
Q ss_pred EEEeCC-----------------eEEEEEEccCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 004732 457 CCIEGN-----------------QLLLIYEYLENNSLARALFEHR------LKLDWPTRRRICLGIARGLAYLHGESRIK 513 (733)
Q Consensus 457 ~~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ 513 (733)
++.+++ ..++||||+ +|+|.+++.... ..+++..++.++.||++||+|||+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--- 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--- 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 666553 278999999 689999997532 12335888999999999999999996
Q ss_pred eecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhC-----------CCCccchhHhHHH
Q 004732 514 VVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-----------HLTEKADVYSFGI 582 (733)
Q Consensus 514 ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~Gv 582 (733)
|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 99999999999999999999999999985332 2334567 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 583 VALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 583 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
++|||++|+.||........ ...+.. .. ...+ ..+.+++.+||+.||++||++.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~------------~~~~~~-~~-~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG------------SEWIFR-SC-KNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CC------------SGGGGS-SC-CCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccc------------hhhhhh-hc-cCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999955432111 111111 11 1222 34888999999999999999999976
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.7e-39 Score=361.72 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=202.5
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh-------------hcHHHHHHHHHHHHhCCCCceeeEee
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-------------QGNREFINEIGMISALQHPNLVKLYG 456 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 456 (733)
..++|...+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 356788999999999999999994 5688999999865321 23467899999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC---CeE
Q 004732 457 CCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSK 533 (733)
Q Consensus 457 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~k 533 (733)
+|.++...++|||||++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999998754 47999999999999999999999996 99999999999998776 699
Q ss_pred EcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC
Q 004732 534 ISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 534 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
|+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||...+......... .+
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~~ 262 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE----KG 262 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HC
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----cC
Confidence 99999998665432 234467999999999986 469999999999999999999999997766544433221 11
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.... ........ ...+.+++.+|++.||.+|||+.|+++.
T Consensus 263 ~~~~--~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 KYYF--DFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCC--CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCC--CccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1100 00000111 2358899999999999999999999753
No 199
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5e-39 Score=336.56 Aligned_cols=261 Identities=25% Similarity=0.366 Sum_probs=201.1
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh--hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
++|...+.||+|+||.||+|+. .+|+.||||.+..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5788889999999999999995 4789999999865422 223678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 470 YLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
|++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 998 59999987543 56899999999999999999999996 99999999999999999999999999976543222
Q ss_pred ccccccccCCCcccHHHHhhCC-CCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC-c-----cccccc-
Q 004732 549 HISTRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG-K-----LMELVD- 620 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~- 620 (733)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...+............... . .....+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCccc
Confidence 223356899999999998765 8999999999999999999999997665443322211111100 0 000000
Q ss_pred -CCCCC----CC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 621 -TNPGS----NF---DKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 621 -~~~~~----~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+.... .+ .......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 00 0012245889999999999999999999987
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.9e-40 Score=342.56 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=185.7
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcH-HHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGN-REFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
..++|+..+.||+|+||.||+|+ ..+|+.||||++.... .... +.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 45678899999999999999999 4678999999986542 2222 3344455568888999999999999999999999
Q ss_pred EEccCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 468 YEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999985 88777753 556899999999999999999999987 6 999999999999999999999999999865
Q ss_pred cccCcccccccccCCCcccHHHH----hhCCCCccchhHhHHHHHHHHHhCCCCCCccc-hhhHHHHHHHHHhhCccccc
Q 004732 544 EEENTHISTRVAGTIGYMAPEYA----MRGHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWALVLKEQGKLMEL 618 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~ 618 (733)
..... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||.... ..... .... ... ....
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~-~~~-~~~~ 234 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL--KQVV-EEP-SPQL 234 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH--HHHH-HSC-CCCC
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH--HHHh-ccC-CCCc
Confidence 44322 2334699999999997 45678999999999999999999999996422 11111 1111 111 1111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 619 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 619 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+...+ ...+.+++.+||+.||++|||+.|+++
T Consensus 235 ----~~~~~----~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ----PADKF----SAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----CTTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----ccccC----CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11122 234889999999999999999999976
No 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.4e-39 Score=357.14 Aligned_cols=194 Identities=24% Similarity=0.424 Sum_probs=154.4
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----Ce
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 463 (733)
.++|...+.||+|+||+||+|+ ..+++.||||++... .....+.+.+|+++++.++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 3678999999999999999998 457899999998653 333457789999999999999999999999543 56
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.|+||||++ |+|.+++.. ...+++..+..++.||++||+|||+.+ ||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 689988864 457999999999999999999999996 999999999999999999999999999865
Q ss_pred cccCc--------------------------ccccccccCCCcccHHHHh-hCCCCccchhHhHHHHHHHHHhC
Q 004732 544 EEENT--------------------------HISTRVAGTIGYMAPEYAM-RGHLTEKADVYSFGIVALEIVSG 590 (733)
Q Consensus 544 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~elltg 590 (733)
..... ......+||+.|+|||++. ...++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 43211 1223467899999999874 56699999999999999999993
No 202
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.7e-39 Score=374.14 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=206.2
Q ss_pred hhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 464 (733)
...++|...+.||+|+||.||+|+. .+++.||||++... .......+..|.+++..+ +||||+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 3457899999999999999999994 56889999998653 223346678899999988 799999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999999765 37999999999999999999999996 9999999999999999999999999998543
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...+.... .. ..
T Consensus 494 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i---~~-~~---------- 558 (674)
T 3pfq_A 494 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI---ME-HN---------- 558 (674)
T ss_dssp CTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HS-SC----------
T ss_pred cCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH---Hh-CC----------
Confidence 322 2244578999999999999999999999999999999999999999776654443321 11 11
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSM-----SSVLR 658 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~-----~~vl~ 658 (733)
..++......+.+++.+|++.||++||++ .||.+
T Consensus 559 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 01112223458899999999999999998 66653
No 203
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.8e-40 Score=338.42 Aligned_cols=251 Identities=29% Similarity=0.446 Sum_probs=203.0
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 469 (733)
.++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 35788889999999999999995 478999999986432 3345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc-
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT- 548 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~- 548 (733)
|+++++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999998854 346899999999999999999999986 99999999999999999999999999986543322
Q ss_pred ccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchh--hHHHHHHHHHhhCcccccccCCCCC
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMF--YLLDWALVLKEQGKLMELVDTNPGS 625 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (733)
.......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ....|. ...... ....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~-----~~~~ 232 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKTYL-----NPWK 232 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH----TTCTTS-----TTGG
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh----hccccc-----Cchh
Confidence 22345679999999999987664 77999999999999999999999654322 111111 111000 0001
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 626 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 626 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 233 ----~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 233 ----KIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ----GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----hcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 122347889999999999999999998763
No 204
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.4e-39 Score=364.45 Aligned_cols=251 Identities=26% Similarity=0.399 Sum_probs=205.8
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc---ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++|||||++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 35678889999999999999994 57899999998543 234567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe---cCCCCeEEcccCccccCc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---DKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---~~~~~~kl~DfGla~~~~ 544 (733)
|||+.+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999998654 47999999999999999999999996 9999999999999 567889999999998655
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
.... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...+......... .+.... ....
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~~~~~~--~~~~- 250 (484)
T 3nyv_A 181 ASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE----KGKYTF--ELPQ- 250 (484)
T ss_dssp CCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HCCCCC--CSGG-
T ss_pred cccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----cCCCCC--CCcc-
Confidence 4322 234579999999999865 79999999999999999999999997766554443221 111110 0000
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.......+.+++.+|++.+|.+|||+.|+++.
T Consensus 251 ---~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 251 ---WKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 01122358899999999999999999999863
No 205
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.9e-39 Score=342.44 Aligned_cols=256 Identities=16% Similarity=0.266 Sum_probs=198.9
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEe--CCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIE--GNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV 467 (733)
.++|...+.||+|+||+||+|+ ..+++.||||.+... ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 3578889999999999999998 567899999998643 3467899999999997 9999999999998 6678999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCC-CeEEcccCccccCccc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEE 546 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~~ 546 (733)
|||+++++|.+++. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999874 4889999999999999999999996 99999999999999777 7999999999865543
Q ss_pred CcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCcc-chhhHHHHHHHHHhhCcccc-------
Q 004732 547 NTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKE-DMFYLLDWALVLKEQGKLME------- 617 (733)
Q Consensus 547 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~------- 617 (733)
.. .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||... ...................+
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 234578999999999987 67999999999999999999999999432 21111111000000000000
Q ss_pred --------ccc--------CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 618 --------LVD--------TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 618 --------~~~--------~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
... ..............+.+++.+|++.||++|||+.|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 000001111123458899999999999999999999873
No 206
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.5e-39 Score=335.01 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=204.0
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---------hhcHHHHHHHHHHHHhCC-CCceeeEeeEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---------KQGNREFINEIGMISALQ-HPNLVKLYGCCI 459 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 459 (733)
..++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 346888999999999999999995 578999999986432 122356789999999996 999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCc
Q 004732 460 EGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 539 (733)
Q Consensus 460 ~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 539 (733)
++...++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999754 47999999999999999999999996 99999999999999999999999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHh------hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAM------RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
+........ .....||+.|+|||.+. ...++.++||||||+++|||++|+.||............ .. +
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~-~ 244 (298)
T 1phk_A 171 SCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI---MS-G 244 (298)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH-T
T ss_pred hhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHH---hc-C
Confidence 986544322 23457899999999986 346889999999999999999999999765543332211 11 1
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
... ... .........+.+++.+||+.||++||++.|+++
T Consensus 245 ~~~-~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQ-FGS-----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCC-CCT-----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Ccc-cCc-----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110 000 001122345889999999999999999999975
No 207
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-38 Score=350.53 Aligned_cols=202 Identities=23% Similarity=0.341 Sum_probs=174.7
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhC------CCCceeeEeeEEEeCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL------QHPNLVKLYGCCIEGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 464 (733)
..+|...+.||+|+||.||+|+ ..+++.||||++... ......+.+|+++++.+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 4578899999999999999998 456899999999653 33446778888888877 577999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC--eEEcccCccc
Q 004732 465 LLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN--SKISDFGLAK 541 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~--~kl~DfGla~ 541 (733)
++||||+. ++|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 68999887543 45999999999999999999999986 999999999999999987 9999999997
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhH
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL 602 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~ 602 (733)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~ 307 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQ 307 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 54432 2346789999999999999999999999999999999999999976655443
No 208
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=345.58 Aligned_cols=260 Identities=22% Similarity=0.372 Sum_probs=203.0
Q ss_pred HhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccC--hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 466 (733)
....++|...+.||+|+||.||+|+... .||+|.+.... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3456788999999999999999998653 59999986542 2233567889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCccc
Q 004732 467 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 546 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 546 (733)
||||+++++|.+++......+++..++.++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999999876668999999999999999999999996 99999999999998 679999999998754322
Q ss_pred C----cccccccccCCCcccHHHHhh---------CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC
Q 004732 547 N----THISTRVAGTIGYMAPEYAMR---------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 613 (733)
Q Consensus 547 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 613 (733)
. ........||+.|+|||.+.. ..++.++|||||||++|||++|+.||........... . ..+
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~-~~~ 258 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ---M-GTG 258 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH---H-HTT
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---h-ccC
Confidence 1 112233568999999999874 3578999999999999999999999976554333211 1 111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004732 614 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 666 (733)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 666 (733)
........ ..+ ..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 259 ~~~~~~~~----~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 259 MKPNLSQI----GMG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp CCCCCCCS----SCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCcC----CCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11111110 111 2388999999999999999999999999976553
No 209
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.1e-40 Score=350.20 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=198.9
Q ss_pred HhhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHH-HHhCCCCceeeEeeEEEeCCeEE
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGM-ISALQHPNLVKLYGCCIEGNQLL 465 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~ 465 (733)
....++|...+.||+|+||.||+|+ ..+|+.||||++.... .....++..|..+ ++.++||||+++++++.+++..+
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 3456788899999999999999999 4679999999987542 2334556666665 77889999999999999999999
Q ss_pred EEEEccCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 466 LIYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
+||||+++ +|.+++.. ....+++..++.++.||++||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999986 89888863 566899999999999999999999986 5 9999999999999999999999999997
Q ss_pred cCcccCcccccccccCCCcccHHHHhh----CCCCccchhHhHHHHHHHHHhCCCCCCccc-hhhHHHHHHHHHhhCccc
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMR----GHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWALVLKEQGKLM 616 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~ 616 (733)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...... . ..... ..
T Consensus 203 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~--~-~~~~~-~~ 276 (340)
T 3an0_A 203 YLVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--Q-VVEEP-SP 276 (340)
T ss_dssp HHSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH--H-HHHSC-CC
T ss_pred eccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH--H-HhcCC-CC
Confidence 654321 2233579999999999743 468999999999999999999999996432 211111 1 11111 11
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 617 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
... .......+.+++.+||+.||++||++.|+++
T Consensus 277 ~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 QLP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCC--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCC--------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 110 0112335889999999999999999999976
No 210
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.2e-39 Score=333.01 Aligned_cols=248 Identities=24% Similarity=0.399 Sum_probs=196.6
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+++++.++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 35788889999999999999995 479999999986432 23346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999754 36899999999999999999999986 9999999999999999999999999998654432
Q ss_pred cccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 626 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (733)
. .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||............ . .+.. . ....
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~-~~~~-~-----~~~~ 233 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI---R-GGVF-Y-----IPEY 233 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-HCCC-C-----CCTT
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh---h-cCcc-c-----Cchh
Confidence 2 234568999999999987665 68999999999999999999999765543332211 1 1110 0 1111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ...+.+++.+|++.||++|||+.|+++.
T Consensus 234 ~----~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 L----NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c----CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 2 2348889999999999999999999874
No 211
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.8e-39 Score=333.62 Aligned_cols=250 Identities=27% Similarity=0.414 Sum_probs=198.4
Q ss_pred cCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQLL 465 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 465 (733)
+.|...+.||+|+||.||+|. ..++..||+|.+... .....+.+.+|+.++++++||||+++++++.. +...+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 346777899999999999998 457889999998653 34445678999999999999999999999876 45689
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-CCCCeEEcccCccccCc
Q 004732 466 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-KDLNSKISDFGLAKLDE 544 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfGla~~~~ 544 (733)
+||||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ .+|+||||||+||+++ .++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999999999754 47899999999999999999999884 3499999999999998 78899999999997544
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
... .....||+.|+|||.+. +.++.++|||||||++|+|++|+.||......... ..... .+......+.
T Consensus 184 ~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~-~~~~~~~~~~--- 253 (290)
T 1t4h_A 184 ASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--YRRVT-SGVKPASFDK--- 253 (290)
T ss_dssp TTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--HHHHT-TTCCCGGGGG---
T ss_pred ccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--HHHHh-ccCCccccCC---
Confidence 322 23456999999999876 46999999999999999999999999653322111 11111 1111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ...+.+++.+||+.||.+|||+.|+++.
T Consensus 254 -~~----~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 254 -VA----IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -CC----CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -CC----CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 1348899999999999999999999863
No 212
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.5e-40 Score=354.30 Aligned_cols=254 Identities=10% Similarity=0.016 Sum_probs=183.1
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccCh---hcHHHHHHHHHHHHhC--CCCceeeEe-------eEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK---QGNREFINEIGMISAL--QHPNLVKLY-------GCC 458 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 458 (733)
..+|...+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4458889999999999999999 45789999999976432 2345677785544444 699988755 455
Q ss_pred EeC-----------------CeEEEEEEccCCCCHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHHHcCCCCCee
Q 004732 459 IEG-----------------NQLLLIYEYLENNSLARALFEHRLKLDWPTR------RRICLGIARGLAYLHGESRIKVV 515 (733)
Q Consensus 459 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~iv 515 (733)
..+ ...++||||++ |+|.+++......+++..+ ..++.||++||+|||+.+ |+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 443 33899999999 8999999865556677777 888899999999999996 99
Q ss_pred cCCCCCCcEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhh--CCCCccchhHhHHHHHHHHHhCCCC
Q 004732 516 HRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSN 593 (733)
Q Consensus 516 H~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~elltg~~p 593 (733)
||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999998654322 13457799999999987 6799999999999999999999999
Q ss_pred CCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 594 VTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
|..........|. .......................+.+++.+||+.||++|||+.|+++
T Consensus 293 f~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWK-----RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCC-----BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchh-----hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9655321100000 00000000001111111122345889999999999999999999864
No 213
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.1e-39 Score=352.95 Aligned_cols=198 Identities=24% Similarity=0.424 Sum_probs=166.5
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----Ce
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 463 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4578899999999999999998 457889999999653 333457889999999999999999999999876 57
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.|+||||++ |+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999987 599998864 457999999999999999999999996 999999999999999999999999999876
Q ss_pred cccCcc---------------------cccccccCCCcccHHHHh-hCCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 544 EEENTH---------------------ISTRVAGTIGYMAPEYAM-RGHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 544 ~~~~~~---------------------~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
...... ......||+.|+|||++. ...++.++||||+||++|||++|..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 443211 134567999999999874 556999999999999999999865444
No 214
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.4e-39 Score=336.57 Aligned_cols=251 Identities=27% Similarity=0.442 Sum_probs=194.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE---------- 460 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 460 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45788899999999999999994 57999999998643 3445778999999999999999999999875
Q ss_pred ---CCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEccc
Q 004732 461 ---GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 537 (733)
Q Consensus 461 ---~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 537 (733)
....++||||+++|+|.+++......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeC
Confidence 35689999999999999999877777899999999999999999999996 999999999999999999999999
Q ss_pred CccccCcccC-------------cccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccc-hhhH
Q 004732 538 GLAKLDEEEN-------------THISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKED-MFYL 602 (733)
Q Consensus 538 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~-~~~~ 602 (733)
|+++...... ........||+.|+|||.+.+. .++.++|||||||++|||++ ||.... ....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~ 237 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence 9998654321 1122345689999999999864 68999999999999999998 554321 1111
Q ss_pred HHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 603 LDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ..... .. ......++......+.+++.+||+.||.+|||+.++++.
T Consensus 238 ~---~~~~~-~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 238 L---KKLRS-VS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp H---HHHHS-TT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred H---Hhccc-cc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1 11111 00 011111222333457899999999999999999999874
No 215
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.9e-39 Score=346.45 Aligned_cols=262 Identities=22% Similarity=0.340 Sum_probs=203.4
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccC-hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----CeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 464 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4578899999999999999998 4578899999987533 33446789999999999999999999999765 468
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999998 4899988653 6999999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCccc--ccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccc----
Q 004732 545 EENTHI--STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME---- 617 (733)
Q Consensus 545 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 617 (733)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+...................
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 433221 344679999999998765 4589999999999999999999999976654444332221111100000
Q ss_pred -------cccCCC-CCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 618 -------LVDTNP-GSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 618 -------~~~~~~-~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.....+ ....+ ......+.+++.+|++.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 00011 1112358899999999999999999999864
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.4e-39 Score=345.86 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=193.3
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN------ 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 462 (733)
.++|...+.||+|+||.||+|+ ..+++.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 3578889999999999999998 457899999998653 2334567889999999999999999999998654
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999985 6877774 35899999999999999999999996 99999999999999999999999999986
Q ss_pred CcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc-c-----
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL-M----- 616 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~----- 616 (733)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...... ......+.. .
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN--KVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHC-CCCCCHHHHTT
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCHHHHHH
Confidence 54322 2334679999999999999999999999999999999999999997665433221 111100000 0
Q ss_pred ------ccccCCCC---------------C---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 617 ------ELVDTNPG---------------S---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 617 ------~~~~~~~~---------------~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
......+. . .........+.+++.+|++.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000 0 0011224578999999999999999999999864
No 217
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5e-39 Score=346.05 Aligned_cols=258 Identities=24% Similarity=0.370 Sum_probs=185.9
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC------C
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------N 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 462 (733)
.++|...+.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 3678889999999999999998 567899999998653 333456788999999999999999999999754 5
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 6899998864 47999999999999999999999986 99999999999999999999999999986
Q ss_pred CcccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc------
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL------ 615 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 615 (733)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.................
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 5432 234678999999999987 67999999999999999999999999776554433322211111000
Q ss_pred --------cccccCCCCCCCC---HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 616 --------MELVDTNPGSNFD---KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 616 --------~~~~~~~~~~~~~---~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+...+...+. ......+.+++.+|++.||.+|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000000000 0112357899999999999999999999864
No 218
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=342.31 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=200.1
Q ss_pred hHHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEe----
Q 004732 387 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIE---- 460 (733)
Q Consensus 387 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 460 (733)
++....++|...+.||+|+||.||+|+. .+|+.||||.+.... .....+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3445678899999999999999999994 578999999986543 2346789999999999 89999999999987
Q ss_pred --CCeEEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEccc
Q 004732 461 --GNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 537 (733)
Q Consensus 461 --~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 537 (733)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeC
Confidence 46889999999999999999754 357899999999999999999999996 999999999999999999999999
Q ss_pred CccccCcccCcccccccccCCCcccHHHHh-----hCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhh
Q 004732 538 GLAKLDEEENTHISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ 612 (733)
Q Consensus 538 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 612 (733)
|++........ ......||+.|+|||.+. +..++.++|||||||++|||++|+.||........... ...
T Consensus 174 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~- 248 (326)
T 2x7f_A 174 GVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---IPR- 248 (326)
T ss_dssp TTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH---HHH-
T ss_pred cCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH---hhc-
Confidence 99986543221 223457899999999987 56789999999999999999999999966544332211 111
Q ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 613 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....... ...++ ..+.+++.+||+.||.+||++.++++.
T Consensus 249 ~~~~~~~----~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 249 NPAPRLK----SKKWS----KKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCCCCCS----CSCSC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CccccCC----ccccC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111 11222 348899999999999999999999873
No 219
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.7e-39 Score=349.55 Aligned_cols=258 Identities=21% Similarity=0.328 Sum_probs=200.4
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC--------CCceeeEeeEEE---
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ--------HPNLVKLYGCCI--- 459 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 459 (733)
.++|...+.||+|+||+||+|+ ..+++.||||++... ......+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3678899999999999999998 567899999999653 344567889999999986 788999999988
Q ss_pred -eCCeEEEEEEccCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCC------
Q 004732 460 -EGNQLLLIYEYLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDL------ 530 (733)
Q Consensus 460 -~~~~~~lV~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~------ 530 (733)
++...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 456789999999 5566665553 346799999999999999999999997 6 99999999999999775
Q ss_pred -------------------------------------------CeEEcccCccccCcccCcccccccccCCCcccHHHHh
Q 004732 531 -------------------------------------------NSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAM 567 (733)
Q Consensus 531 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 567 (733)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999865433 23357899999999999
Q ss_pred hCCCCccchhHhHHHHHHHHHhCCCCCCccchh------hHHHHHHHHHhh--------C-ccccccc----------CC
Q 004732 568 RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF------YLLDWALVLKEQ--------G-KLMELVD----------TN 622 (733)
Q Consensus 568 ~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~------~~~~~~~~~~~~--------~-~~~~~~~----------~~ 622 (733)
+..++.++|||||||++|||++|+.||...... ............ + ....... ..
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999999543311 111111100000 0 0000000 00
Q ss_pred C---------CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 623 P---------GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 623 ~---------~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
+ ....+......+.+++.+||+.||++|||+.|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 01235566778999999999999999999999986
No 220
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.5e-39 Score=341.59 Aligned_cols=251 Identities=22% Similarity=0.345 Sum_probs=195.4
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh--------hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--------QGNREFINEIGMISALQHPNLVKLYGCCIEGN 462 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 462 (733)
.++|...+.||+|+||.||+|+. .+++.||||.+..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 45788999999999999999984 5689999999865321 12245889999999999999999999987655
Q ss_pred eEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC---eEEcccCc
Q 004732 463 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGL 539 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~---~kl~DfGl 539 (733)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 89999999999999988643 47999999999999999999999986 999999999999987664 99999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHh---hCCCCccchhHhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhhCcc
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKL 615 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~ 615 (733)
++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .+.... ..+..
T Consensus 164 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~~~ 237 (322)
T 2ycf_A 164 SKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----TSGKY 237 (322)
T ss_dssp CEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHH----HHTCC
T ss_pred ceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHH----HhCcc
Confidence 98654322 223457999999999985 456899999999999999999999999543321 111111 11111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 616 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
..... .... ....+.+++.+||+.||++||++.++++.
T Consensus 238 ~~~~~--~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 238 NFIPE--VWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCCHH--HHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCch--hhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 00000 0001 12358899999999999999999999763
No 221
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.2e-39 Score=339.26 Aligned_cols=263 Identities=25% Similarity=0.387 Sum_probs=202.5
Q ss_pred hhhcCccccCcccCCCcccEEEccc--CCCcEEEEEEccccC--hhcHHHHHHHHHHHHhC---CCCceeeEeeEEE---
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGLL--ADGTAIAVKQLSSKS--KQGNREFINEIGMISAL---QHPNLVKLYGCCI--- 459 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 459 (733)
.+.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999985 468899999986432 11223566777777666 8999999999987
Q ss_pred --eCCeEEEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcc
Q 004732 460 --EGNQLLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 536 (733)
Q Consensus 460 --~~~~~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 536 (733)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999998 69999997543 35999999999999999999999996 99999999999999999999999
Q ss_pred cCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccc
Q 004732 537 FGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM 616 (733)
Q Consensus 537 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 616 (733)
||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......................
T Consensus 164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99998655332 2344678999999999999999999999999999999999999997665544333222111100000
Q ss_pred cc----------ccC---CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 617 EL----------VDT---NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 617 ~~----------~~~---~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.. ... .....+.......+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000 0000011122345789999999999999999999985
No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.3e-39 Score=352.47 Aligned_cols=256 Identities=24% Similarity=0.297 Sum_probs=193.4
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC------CeEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG------NQLL 465 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 465 (733)
.+|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|+++++.++|||||+++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3577889999999999999995 5689999999865322 234799999999999999999998642 2367
Q ss_pred EEEEccCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC-CCeEEcccCccc
Q 004732 466 LIYEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfGla~ 541 (733)
+||||+++ ++.+.+. .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 5655554 34568999999999999999999999986 9999999999999965 568999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh---------
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE--------- 611 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~--------- 611 (733)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.............
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 6543322 2346789999999999765 799999999999999999999999976654332221111100
Q ss_pred -hCcccccccCCCCCC-----CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 612 -QGKLMELVDTNPGSN-----FDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 612 -~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.....+...+..... +.......+.+++.+||+.||.+||++.|+++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000011100000000 11112346889999999999999999999985
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.9e-39 Score=351.60 Aligned_cols=258 Identities=23% Similarity=0.300 Sum_probs=195.5
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe------EEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ------LLL 466 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~l 466 (733)
.+|...+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||++++++|..... .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46788899999999999999987777799998854322 22369999999999999999999975433 789
Q ss_pred EEEccCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-CCCCeEEcccCccccC
Q 004732 467 IYEYLENNSLARALF--EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-KDLNSKISDFGLAKLD 543 (733)
Q Consensus 467 V~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfGla~~~ 543 (733)
||||++++.+..... .....+++..+..++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999999865544332 34568999999999999999999999996 99999999999999 7899999999999865
Q ss_pred cccCcccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC---------
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG--------- 613 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 613 (733)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...+...............
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 44322 2345789999999999765 59999999999999999999999997665443322211111000
Q ss_pred -cccccccCCCC-C----CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 614 -KLMELVDTNPG-S----NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 614 -~~~~~~~~~~~-~----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+..-+... . .+.......+.+++.+||+.||.+|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000 0 0111123468899999999999999999999864
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=333.15 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=199.1
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC----hhcHHHHHHHHHHHHhCCCCceeeEeeEEE--eCCeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS----KQGNREFINEIGMISALQHPNLVKLYGCCI--EGNQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 464 (733)
.++|...+.||+|+||.||+|.. .+++.||||.+.... ......+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 36889999999999999999995 578999999986542 234577899999999999999999999985 44678
Q ss_pred EEEEEccCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 465 LLIYEYLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
++||||++++ |.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999987 7676654 3457999999999999999999999996 999999999999999999999999999865
Q ss_pred cccC-cccccccccCCCcccHHHHhhCC--CCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCccccccc
Q 004732 544 EEEN-THISTRVAGTIGYMAPEYAMRGH--LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 620 (733)
Q Consensus 544 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (733)
.... ........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...+........ ..+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i----~~~~~-~--- 231 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI----GKGSY-A--- 231 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----HHCCC-C---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHH----hcCCC-C---
Confidence 4322 22233456999999999997644 478999999999999999999999766544332211 11111 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 621 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 621 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+ ...+.+++.+||+.||.+||++.|+++.
T Consensus 232 --~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 --IPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11122 2347889999999999999999999864
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-38 Score=342.33 Aligned_cols=266 Identities=21% Similarity=0.273 Sum_probs=191.7
Q ss_pred hHHhhhcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe--
Q 004732 387 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ-- 463 (733)
Q Consensus 387 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 463 (733)
+.....++|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|++.++.++||||++++++|.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 3455678999999999999999999995 578999999886542 223456788889999999999999999976433
Q ss_pred -----EEEEEEccCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHH--cCCCCCeecCCCCCCcEEecC-CCCe
Q 004732 464 -----LLLIYEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLH--GESRIKVVHRDIKATNVLLDK-DLNS 532 (733)
Q Consensus 464 -----~~lV~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dik~~Nill~~-~~~~ 532 (733)
.++||||++++ |.+.+. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcE
Confidence 78999999874 544443 34567899999999999999999999 775 999999999999997 8999
Q ss_pred EEcccCccccCcccCcccccccccCCCcccHHHHhhCC-CCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh
Q 004732 533 KISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE 611 (733)
Q Consensus 533 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 611 (733)
||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.............
T Consensus 172 kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp EECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred EEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 9999999986654332 23457899999999997654 89999999999999999999999976654443322211110
Q ss_pred hC------------cccccccCCC------CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 612 QG------------KLMELVDTNP------GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 612 ~~------------~~~~~~~~~~------~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ......+... ...........+.+++.+||+.||.+|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00 0000000000 001111134568899999999999999999999763
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.4e-38 Score=338.41 Aligned_cols=262 Identities=21% Similarity=0.308 Sum_probs=201.0
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----CeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQL 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 464 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+... .......+.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46888999999999999999995 57899999998653 233456788999999999999999999998764 678
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCc
Q 004732 465 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 544 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 544 (733)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999998 589998865 36899999999999999999999996 9999999999999999999999999998655
Q ss_pred ccCcc---------cccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc
Q 004732 545 EENTH---------ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK 614 (733)
Q Consensus 545 ~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 614 (733)
..... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...+................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 32211 1223578999999998865 6799999999999999999999999976654433222211111100
Q ss_pred cc------------ccccCCCC-CCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 LM------------ELVDTNPG-SNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ~~------------~~~~~~~~-~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. +.....+. .... ......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000 0000 1123357899999999999999999999873
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=336.05 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=194.4
Q ss_pred hcCccccCcccCCCcccEEEcccC-CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEE-----------
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCI----------- 459 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 459 (733)
.++|...+.||+|+||.||+|+.. +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357888999999999999999954 58999999987766666778999999999999999999999873
Q ss_pred ---eCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-CCCCeEEc
Q 004732 460 ---EGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-KDLNSKIS 535 (733)
Q Consensus 460 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~ 535 (733)
+....++||||++ |+|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999998 699998854 46899999999999999999999996 99999999999997 56789999
Q ss_pred ccCccccCcccCcc--cccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhh
Q 004732 536 DFGLAKLDEEENTH--ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ 612 (733)
Q Consensus 536 DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 612 (733)
|||+++........ ......||..|+|||.+.+ ..++.++|||||||++|||++|+.||..................
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999876432221 1234567999999998876 67999999999999999999999999766543322211110000
Q ss_pred ----------CcccccccCC-CCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 613 ----------GKLMELVDTN-PGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 613 ----------~~~~~~~~~~-~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.......... .....+ ......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000000000 000000 012345889999999999999999999976
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.2e-38 Score=339.58 Aligned_cols=262 Identities=20% Similarity=0.256 Sum_probs=203.9
Q ss_pred hhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CC-----ceeeEeeEEEeCC
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HP-----NLVKLYGCCIEGN 462 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 462 (733)
...++|...+.||+|+||+||+|+ ..+++.||||++... ......+..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 346789999999999999999998 457889999999743 333567788999988885 55 4999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec--CCCCeEEcccCc
Q 004732 463 QLLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD--KDLNSKISDFGL 539 (733)
Q Consensus 463 ~~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~--~~~~~kl~DfGl 539 (733)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||.+ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 59999997543 5699999999999999999999953 12599999999999995 477899999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhC------
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG------ 613 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 613 (733)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+...............
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 283 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 234678999999999999999999999999999999999999997665544433222111100
Q ss_pred ---cccccccCC-----------------------------------------CCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 004732 614 ---KLMELVDTN-----------------------------------------PGSNFDKEQVMVMINVALLCANASPTI 649 (733)
Q Consensus 614 ---~~~~~~~~~-----------------------------------------~~~~~~~~~~~~l~~l~~~c~~~~P~~ 649 (733)
.....++.. ............+.+++.+||+.||++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 363 (382)
T 2vx3_A 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 363 (382)
T ss_dssp TCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTT
T ss_pred hhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhh
Confidence 000000000 000112234457899999999999999
Q ss_pred CCCHHHHHH
Q 004732 650 RPSMSSVLR 658 (733)
Q Consensus 650 RPt~~~vl~ 658 (733)
|||+.|+++
T Consensus 364 Rpta~e~L~ 372 (382)
T 2vx3_A 364 RIQPYYALQ 372 (382)
T ss_dssp SCCHHHHTT
T ss_pred CCCHHHHhc
Confidence 999999876
No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.8e-38 Score=334.90 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=203.7
Q ss_pred hcCccccCcccCCCcccEEEccc--CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCc------eeeEeeEEEeCCe
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL--ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN------LVKLYGCCIEGNQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 463 (733)
.++|...+.||+|+||.||+|.. .+++.||||++... ......+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45788999999999999999984 46889999998653 334567889999999887654 9999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC--------------
Q 004732 464 LLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-------------- 528 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~-------------- 528 (733)
.++||||+ +++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987543 46899999999999999999999996 999999999999987
Q ss_pred -----CCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHH
Q 004732 529 -----DLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLL 603 (733)
Q Consensus 529 -----~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~ 603 (733)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.....
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 668999999999864432 23457899999999999989999999999999999999999999765544332
Q ss_pred HHHHHHHhhCc--------cccccc---------------------C-CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004732 604 DWALVLKEQGK--------LMELVD---------------------T-NPGSNFDKEQVMVMINVALLCANASPTIRPSM 653 (733)
Q Consensus 604 ~~~~~~~~~~~--------~~~~~~---------------------~-~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 653 (733)
........... ...... + .............+.+++.+||+.||.+|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 22111110000 000000 0 00011123445678999999999999999999
Q ss_pred HHHHHH
Q 004732 654 SSVLRM 659 (733)
Q Consensus 654 ~~vl~~ 659 (733)
.|+++.
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 998753
No 230
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=353.47 Aligned_cols=199 Identities=27% Similarity=0.444 Sum_probs=154.8
Q ss_pred cCccc-cCcccCCCcccEEEcccC---CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEEE
Q 004732 393 NNFAT-DNNIGEGGFGPVYKGLLA---DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLLL 466 (733)
Q Consensus 393 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 466 (733)
+.|.. .++||+|+||+||+|+.. +++.||||++..... ...+.+|++++++++|||||++++++.. +...++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34554 468999999999999854 578999999975432 3578899999999999999999999965 678999
Q ss_pred EEEccCCCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe----cCCCCeEE
Q 004732 467 IYEYLENNSLARALFEH--------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL----DKDLNSKI 534 (733)
Q Consensus 467 V~e~~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill----~~~~~~kl 534 (733)
||||+++ +|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 787777521 224999999999999999999999997 9999999999999 77789999
Q ss_pred cccCccccCcccCc--ccccccccCCCcccHHHHhhC-CCCccchhHhHHHHHHHHHhCCCCCCcc
Q 004732 535 SDFGLAKLDEEENT--HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKE 597 (733)
Q Consensus 535 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~elltg~~p~~~~ 597 (733)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999987654322 223456799999999999874 5999999999999999999999999543
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.3e-39 Score=338.19 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=197.0
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCC--CCceeeEeeEEEeCCe
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQ--HPNLVKLYGCCIEGNQ 463 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 463 (733)
+....++|...+.||+|+||.||+|+..+++.||||.+... .......+.+|++++++++ ||||+++++++.+++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 34456778999999999999999999888999999998643 3344577899999999997 5999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.++||| +.+++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++ +.+||+|||+++..
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999999 6788999999764 47899999999999999999999996 999999999999975 78999999999866
Q ss_pred cccCcc-cccccccCCCcccHHHHhh-----------CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh
Q 004732 544 EEENTH-ISTRVAGTIGYMAPEYAMR-----------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE 611 (733)
Q Consensus 544 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 611 (733)
...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... .. ......
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~-~~~~~~ 254 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SK-LHAIID 254 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HH-HHHHHC
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-HH-HHHHHh
Confidence 543322 2234579999999999875 468889999999999999999999995432111 11 111111
Q ss_pred hCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 612 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
..... .++......+.+++.+||+.||++||++.|+++.
T Consensus 255 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNHEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTSCC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 1111112358889999999999999999999864
No 232
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.7e-39 Score=345.22 Aligned_cols=256 Identities=20% Similarity=0.312 Sum_probs=203.8
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhc-----------------HHHHHHHHHHHHhCCCCceeeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQG-----------------NREFINEIGMISALQHPNLVKL 454 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 454 (733)
.++|...+.||+|+||.||+|+. +|+.||||.+....... ...+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999999998 89999999986432111 1789999999999999999999
Q ss_pred eeEEEeCCeEEEEEEccCCCCHHHH------HHhc-CCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeecCCCCCCcEEe
Q 004732 455 YGCCIEGNQLLLIYEYLENNSLARA------LFEH-RLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLL 526 (733)
Q Consensus 455 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dik~~Nill 526 (733)
++++.+++..++||||+++|+|.++ +... ...+++..++.++.|++.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998 5432 5679999999999999999999998 75 9999999999999
Q ss_pred cCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhC-CCCc-cchhHhHHHHHHHHHhCCCCCCccch-hhHH
Q 004732 527 DKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-HLTE-KADVYSFGIVALEIVSGRSNVTKEDM-FYLL 603 (733)
Q Consensus 527 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~Gvil~elltg~~p~~~~~~-~~~~ 603 (733)
+.++.+||+|||++...... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||..... ....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 99999999999999865443 23446799999999999877 5666 99999999999999999999965543 2222
Q ss_pred HHHHHHHhhCcccccccCC-------C---CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 604 DWALVLKEQGKLMELVDTN-------P---GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
... ..+.. ...... . ...........+.+++.+||+.||.+||++.|+++.
T Consensus 263 ~~i----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNI----RTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHH----TSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHH----hccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 211 11111 000000 0 000001223458899999999999999999999873
No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-38 Score=329.65 Aligned_cols=251 Identities=23% Similarity=0.372 Sum_probs=203.0
Q ss_pred hhcCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
..++|...+.||+|+||.||+|+. .+++.||||++... .......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 346788999999999999999995 47899999998643 233467899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC---CCeEEcccCccccCc
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD---LNSKISDFGLAKLDE 544 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~DfGla~~~~ 544 (733)
|||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999988654 37899999999999999999999996 9999999999999764 469999999998654
Q ss_pred ccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCC
Q 004732 545 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 624 (733)
Q Consensus 545 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (733)
.... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...+........ . .+....... ..
T Consensus 176 ~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~-~~~~~~~~~--~~ 246 (287)
T 2wei_A 176 QNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV---E-TGKYAFDLP--QW 246 (287)
T ss_dssp CCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-HCCCCCCSG--GG
T ss_pred CCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH---H-cCCCCCCch--hh
Confidence 4322 223458899999998865 5899999999999999999999999766544333211 1 111110000 00
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 625 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 625 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
..+ ...+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~----~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 RTI----SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhc----CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 112 234889999999999999999999987
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4e-38 Score=340.15 Aligned_cols=257 Identities=22% Similarity=0.381 Sum_probs=197.5
Q ss_pred hcCccccCcccCCCcccEEEcc-cCCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE----
Q 004732 392 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL---- 464 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 464 (733)
.++|...+.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 3578888999999999999998 457899999998754 233356788999999999999999999999877654
Q ss_pred --EEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 465 --LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 465 --~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
++||||+. ++|.+.+ ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999998 5787776 335999999999999999999999996 99999999999999999999999999985
Q ss_pred CcccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcc------
Q 004732 543 DEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL------ 615 (733)
Q Consensus 543 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 615 (733)
.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...+.................
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence 5432 234578999999999987 67999999999999999999999999766544433222111100000
Q ss_pred --------cccccCCCCCCC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 616 --------MELVDTNPGSNF---DKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 616 --------~~~~~~~~~~~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
...+.......+ .......+.+++.+|++.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000 01113458899999999999999999999864
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-37 Score=333.87 Aligned_cols=258 Identities=20% Similarity=0.279 Sum_probs=200.3
Q ss_pred hcCccccCcccCCCcccEEEccc-CCC-cEEEEEEccccChhcHHHHHHHHHHHHhCCCCc------eeeEeeEEEeCCe
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADG-TAIAVKQLSSKSKQGNREFINEIGMISALQHPN------LVKLYGCCIEGNQ 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 463 (733)
.++|...+.||+|+||.||+|+. .++ +.||||++... ......+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 35788999999999999999984 344 68999998653 334567888999999997766 9999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEe----------------
Q 004732 464 LLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL---------------- 526 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill---------------- 526 (733)
.++||||+ ++++.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 56676666644 357999999999999999999999986 9999999999999
Q ss_pred ---cCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHH
Q 004732 527 ---DKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLL 603 (733)
Q Consensus 527 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~ 603 (733)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.....
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 66789999999999864432 23457999999999999999999999999999999999999999765544333
Q ss_pred HHHHHHHhhC--------cccccc-cC---------------------CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004732 604 DWALVLKEQG--------KLMELV-DT---------------------NPGSNFDKEQVMVMINVALLCANASPTIRPSM 653 (733)
Q Consensus 604 ~~~~~~~~~~--------~~~~~~-~~---------------------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 653 (733)
.......... ...... .. .............+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 2221111000 000000 00 00001122334578899999999999999999
Q ss_pred HHHHH
Q 004732 654 SSVLR 658 (733)
Q Consensus 654 ~~vl~ 658 (733)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99875
No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.7e-38 Score=341.91 Aligned_cols=260 Identities=19% Similarity=0.299 Sum_probs=200.3
Q ss_pred hhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-----------CCceeeEeeEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-----------HPNLVKLYGCC 458 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 458 (733)
..++|...+.||+|+||+||+|+ ..+++.||||++... ......+.+|+.++++++ ||||+++++++
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 34678999999999999999999 467899999998643 334567889999998886 89999999999
Q ss_pred EeCC----eEEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEec-----
Q 004732 459 IEGN----QLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLD----- 527 (733)
Q Consensus 459 ~~~~----~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~----- 527 (733)
...+ ..++||||+ +++|.+++... ...+++..+..++.||+.||+|||+. + |+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCC
Confidence 8654 789999999 89999999753 34699999999999999999999997 6 99999999999995
Q ss_pred -CCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhH----
Q 004732 528 -KDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL---- 602 (733)
Q Consensus 528 -~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~---- 602 (733)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 3447999999999865432 2335789999999999999999999999999999999999999964432110
Q ss_pred HHHHHHHHhhCcccc-----------ccc------C-------------CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC
Q 004732 603 LDWALVLKEQGKLME-----------LVD------T-------------NPGSNFDKEQVMVMINVALLCANASPTIRPS 652 (733)
Q Consensus 603 ~~~~~~~~~~~~~~~-----------~~~------~-------------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt 652 (733)
.........-+.... ... . .....++......+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 000000000000000 000 0 0011245566778999999999999999999
Q ss_pred HHHHHHH
Q 004732 653 MSSVLRM 659 (733)
Q Consensus 653 ~~~vl~~ 659 (733)
+.|+++.
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999873
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.5e-38 Score=334.62 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=177.7
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC-hhcHHHHHHHHH-HHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIG-MISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+..|+. +++.++||||+++++++.+++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46788899999999999999995 578999999986542 333455666666 677789999999999999999999999
Q ss_pred EccCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 469 EYLENNSLARALFE----HRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 469 e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
||+++ +|.+++.. ....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 78777652 256789999999999999999999997 6 999999999999999999999999999865
Q ss_pred cccCcccccccccCCCcccHHHH----hhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccc
Q 004732 544 EEENTHISTRVAGTIGYMAPEYA----MRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 619 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (733)
..... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||....... +. ........
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~------~~~~~~~~ 246 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQ------LTQVVKGD 246 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------CCCCCSC
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HH------HHHHhcCC
Confidence 44322 2334689999999998 45678999999999999999999999996432110 00 00010000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 620 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
.+.............+.+++.+||+.||++||++.++++
T Consensus 247 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000111011112335889999999999999999999975
No 238
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=330.33 Aligned_cols=250 Identities=25% Similarity=0.391 Sum_probs=179.9
Q ss_pred hcCccccCcccCCCcccEEEccc-CCCcEEEEEEccccCh-hcH-HHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-QGN-REFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... ... +.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 45778889999999999999995 5789999999865432 222 33444556788889999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
||+ ++.+..+.......+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5566666555556899999999999999999999984 5 9999999999999999999999999997654432
Q ss_pred cccccccccCCCcccHHHHh-----hCCCCccchhHhHHHHHHHHHhCCCCCCccc-hhhHHHHHHHHHhhCcccccccC
Q 004732 548 THISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
. .....||+.|+|||.+. ...++.++|||||||++|||++|+.||.... ...... ... . +.......
T Consensus 180 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~-~-~~~~~~~~- 252 (318)
T 2dyl_A 180 A--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT--KVL-Q-EEPPLLPG- 252 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH--HHH-H-SCCCCCCS-
T ss_pred c--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH--HHh-c-cCCCCCCc-
Confidence 2 23456899999999994 4568999999999999999999999996532 222111 111 1 11111100
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
...++ ..+.+++.+||+.||.+||++.++++
T Consensus 253 --~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 253 --HMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cCCCC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01122 34888999999999999999999975
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=337.35 Aligned_cols=256 Identities=22% Similarity=0.371 Sum_probs=196.2
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe------
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ------ 463 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 463 (733)
++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5788889999999999999984 57899999998653 23335678899999999999999999999987653
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.++||||++ |+|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999998 58877653 35899999999999999999999996 999999999999999999999999999864
Q ss_pred cccCcccccccccCCCcccHHHHhh-CCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc--------
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-------- 614 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 614 (733)
... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...+................
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 432 234578999999999987 6789999999999999999999999976654433222111110000
Q ss_pred ------ccccccCCCC---CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 ------LMELVDTNPG---SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ------~~~~~~~~~~---~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
....+..... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000 01111223458899999999999999999999863
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-37 Score=343.51 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=188.2
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEcc
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYL 471 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 471 (733)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 344556889999999998776667999999998643 235678899999886 8999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC-------------CCe
Q 004732 472 ENNSLARALFEHRLK------LDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-------------LNS 532 (733)
Q Consensus 472 ~~gsL~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~-------------~~~ 532 (733)
+ |+|.+++...... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999744321 133456789999999999999986 9999999999999754 479
Q ss_pred EEcccCccccCcccCcc---cccccccCCCcccHHHHhh-------CCCCccchhHhHHHHHHHHHh-CCCCCCccchhh
Q 004732 533 KISDFGLAKLDEEENTH---ISTRVAGTIGYMAPEYAMR-------GHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFY 601 (733)
Q Consensus 533 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~ 601 (733)
||+|||+++........ ......||++|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999876543322 1234579999999999975 568999999999999999999 999995443221
Q ss_pred HHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 602 LLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.. ........ +.............+.+++.+||+.||.+|||+.||++.
T Consensus 248 -~~---i~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -SN---IIRGIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HH---HHHTCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HH---HhcCCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11 11111011 111122244566779999999999999999999999763
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.5e-38 Score=334.94 Aligned_cols=252 Identities=21% Similarity=0.239 Sum_probs=171.0
Q ss_pred hcCcccc-CcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEE
Q 004732 392 TNNFATD-NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQLL 465 (733)
Q Consensus 392 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 465 (733)
.++|... ++||+|+||.||+|+. .+|+.||||++... . ....+....++.++||||+++++++.. +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4567774 4699999999999995 47999999998643 1 122223334677799999999999976 45589
Q ss_pred EEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEEcccCccc
Q 004732 466 LIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl~DfGla~ 541 (733)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998543 46999999999999999999999996 999999999999986 4559999999998
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.................... ...+
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~ 253 (336)
T 3fhr_A 180 ETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YGFP 253 (336)
T ss_dssp EC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CCC
T ss_pred eccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---cccC
Confidence 654322 2345689999999999888899999999999999999999999965433222110000000000 0000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.+ ........+.+++.+||+.||.+|||+.|+++.
T Consensus 254 ~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 254 NP---EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TT---TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ch---hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 011123358899999999999999999999873
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=331.95 Aligned_cols=244 Identities=26% Similarity=0.393 Sum_probs=191.7
Q ss_pred HhhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChh------cHHHHHHHHHHHHhC----CCCceeeEeeE
Q 004732 389 KAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ------GNREFINEIGMISAL----QHPNLVKLYGC 457 (733)
Q Consensus 389 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~ 457 (733)
....++|...+.||+|+||.||+|+ ..+++.||||.+...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 3445789999999999999999998 467899999999654321 223456799999998 89999999999
Q ss_pred EEeCCeEEEEEEc-cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-CCCCeEEc
Q 004732 458 CIEGNQLLLIYEY-LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-KDLNSKIS 535 (733)
Q Consensus 458 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~ 535 (733)
+.+++..++|+|| +.+++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 8999999999764 36999999999999999999999986 99999999999999 88999999
Q ss_pred ccCccccCcccCcccccccccCCCcccHHHHhhCCCC-ccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc
Q 004732 536 DFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLT-EKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK 614 (733)
Q Consensus 536 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 614 (733)
|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||...... . . ..
T Consensus 183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~-------~-~~ 249 (312)
T 2iwi_A 183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI--L-------E-AE 249 (312)
T ss_dssp CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--H-------H-TC
T ss_pred EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--h-------h-hc
Confidence 999998665432 2345689999999999877664 5999999999999999999999654211 0 0 00
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 615 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. . ..... ...+.+++.+||+.||++||++.|+++.
T Consensus 250 ~-~-----~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 L-H-----FPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp C-C-----CCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred c-C-----CcccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 11112 2348889999999999999999999874
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.2e-38 Score=335.06 Aligned_cols=243 Identities=22% Similarity=0.380 Sum_probs=199.7
Q ss_pred hhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccChh------cHHHHHHHHHHHHhCC--CCceeeEeeEEEe
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ------GNREFINEIGMISALQ--HPNLVKLYGCCIE 460 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 460 (733)
...++|...+.||+|+||.||+|+ ..+++.||||.+...... ....+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 445688999999999999999998 567899999998654211 2245678999999996 5999999999999
Q ss_pred CCeEEEEEEccCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEec-CCCCeEEcccC
Q 004732 461 GNQLLLIYEYLEN-NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD-KDLNSKISDFG 538 (733)
Q Consensus 461 ~~~~~lV~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfG 538 (733)
++..++|+||+.+ ++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++ .++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999986 8999998754 47899999999999999999999986 99999999999999 77899999999
Q ss_pred ccccCcccCcccccccccCCCcccHHHHhhCCC-CccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccc
Q 004732 539 LAKLDEEENTHISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME 617 (733)
Q Consensus 539 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 617 (733)
+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... . .....
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~--------~~~~~- 261 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--I--------RGQVF- 261 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--H--------HCCCC-
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh--h--------ccccc-
Confidence 998655432 234569999999999987765 78899999999999999999999654211 0 01100
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 618 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 618 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
.....+ ..+.+++.+||+.||++||++.|+++.
T Consensus 262 -----~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 262 -----FRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -----CSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----ccccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111222 348899999999999999999999874
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=342.25 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=190.0
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 469 (733)
...+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.++...++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 3446788899999999997655566789999999865432 2356899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC-----CCCeEEcccCccccCc
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-----DLNSKISDFGLAKLDE 544 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~-----~~~~kl~DfGla~~~~ 544 (733)
||+ |+|.+++........+..+..++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+++...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 997 5999999876666777788899999999999999996 999999999999953 3358899999998765
Q ss_pred ccCc--ccccccccCCCcccHHHHh---hCCCCccchhHhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhhCccccc
Q 004732 545 EENT--HISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMEL 618 (733)
Q Consensus 545 ~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (733)
.... .......||++|+|||++. ...++.++|||||||++|||++ |+.||......... ....... ...
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~----~~~~~~~-~~~ 249 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN----ILLGACS-LDC 249 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH----HHTTCCC-CTT
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH----HHhccCC-ccc
Confidence 4322 2234467999999999997 4567889999999999999999 88888443221111 0111000 000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 619 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 619 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
..........+.+++.+||+.||.+|||+.||++
T Consensus 250 ------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111233445789999999999999999999975
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1e-37 Score=353.27 Aligned_cols=257 Identities=24% Similarity=0.344 Sum_probs=198.5
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe------CCeE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIE------GNQL 464 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 464 (733)
++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++++++||||+++++++.. ++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6789999999999999999995 57899999998654 34445778999999999999999999998765 6778
Q ss_pred EEEEEccCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC---eEEcccCc
Q 004732 465 LLIYEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGL 539 (733)
Q Consensus 465 ~lV~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~---~kl~DfGl 539 (733)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997533 36899999999999999999999986 999999999999997765 89999999
Q ss_pred cccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCc----c
Q 004732 540 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK----L 615 (733)
Q Consensus 540 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~ 615 (733)
++....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..|......... .
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP--VQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH--HHSSTTCC------CCS
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch--hhhhhhhhcccchhhhh
Confidence 986654322 24467999999999999889999999999999999999999999654321 112111000000 0
Q ss_pred cccccC--------CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 004732 616 MELVDT--------NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSV 656 (733)
Q Consensus 616 ~~~~~~--------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~v 656 (733)
.+.... .............+.+++.+|++.||++|||+.|+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 01122344456779999999999999999999774
No 246
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-36 Score=332.12 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=181.9
Q ss_pred hhhcCccccCcccCCCcccEEEcc-cCCCcEEEEEEccccCh---hcHHHHHHHHHHHHhCCC-Ccee------------
Q 004732 390 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK---QGNREFINEIGMISALQH-PNLV------------ 452 (733)
Q Consensus 390 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv------------ 452 (733)
..+..|...++||+|+||+||+|+ ..+|+.||||++..... ...+.|.+|+.+++.++| +|..
T Consensus 75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~ 154 (413)
T 3dzo_A 75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154 (413)
T ss_dssp SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence 345567788999999999999999 66899999999874322 234678999999999987 2211
Q ss_pred ---e------EeeEEEe-----CCeEEEEEEccCCCCHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 004732 453 ---K------LYGCCIE-----GNQLLLIYEYLENNSLARALF------EHRLKLDWPTRRRICLGIARGLAYLHGESRI 512 (733)
Q Consensus 453 ---~------l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~ 512 (733)
. ++.++.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+|||+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-- 231 (413)
T 3dzo_A 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-- 231 (413)
T ss_dssp EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence 1 1111111 12356777755 679998884 22445788999999999999999999986
Q ss_pred CeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHH----------hhCCCCccchhHhHHH
Q 004732 513 KVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYA----------MRGHLTEKADVYSFGI 582 (733)
Q Consensus 513 ~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~Gv 582 (733)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||
T Consensus 232 -iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 232 -LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp -EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred -cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 999999999999999999999999999865443 344567 999999999 4445888999999999
Q ss_pred HHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004732 583 VALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 658 (733)
Q Consensus 583 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 658 (733)
++|||++|+.||...+.... ....+... ...+ ..+.+++.+||+.||++||++.++++
T Consensus 306 il~elltg~~Pf~~~~~~~~------------~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALGG------------SEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGSC------------SGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHCCCCCCCcchhhh------------HHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999999965543211 11111111 1222 34889999999999999999998854
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-36 Score=352.51 Aligned_cols=237 Identities=21% Similarity=0.313 Sum_probs=190.8
Q ss_pred hcCccccCcccCCCcccEEEcccC--CCcEEEEEEcccc-ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe-----
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLA--DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ----- 463 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 463 (733)
.++|.+.+.||+|+||+||+|+.. +|+.||||.+... .......+.+|++++++++|||||+++++|.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367889999999999999999854 6899999998654 33445678999999999999999999999987655
Q ss_pred EEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccC
Q 004732 464 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 464 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 543 (733)
.|+||||+++++|.+++.. .+++..++.++.||++||.|||+.+ |+||||||+|||++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 7999999999999987743 7999999999999999999999996 9999999999999986 8999999999865
Q ss_pred cccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCC
Q 004732 544 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 623 (733)
Q Consensus 544 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (733)
... ....||++|+|||++.+.. +.++|||||||++|||++|..||...... .+ +
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~----~ 285 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GL----P 285 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SC----C
T ss_pred ccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc----------------cc----c
Confidence 433 3467999999999987754 89999999999999999998887542110 00 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHHHhc
Q 004732 624 GSNFDKEQVMVMINVALLCANASPTIRPS-MSSVLRMLE 661 (733)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~~vl~~L~ 661 (733)
...........+.+++.+||+.||.+||+ +.++...|.
T Consensus 286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 00011122346889999999999999996 455555554
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.1e-35 Score=308.85 Aligned_cols=229 Identities=14% Similarity=0.099 Sum_probs=181.7
Q ss_pred cCccccCcccCCCcccEEEccc-CCCcEEEEEEccccC---hhcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004732 393 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 468 (733)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 5688889999999999999995 468999999997643 233467899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCc
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 548 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 548 (733)
||+++++|.+++.. .....++.+++.|++.||+|||+.| |+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999999853 2356678999999999999999997 9999999999999999999998554
Q ss_pred ccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCC--C
Q 004732 549 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS--N 626 (733)
Q Consensus 549 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 626 (733)
|++ .++.++|||||||++|||++|+.||...+...... ............ .
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~ 227 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA---------PAERDTAGQPIEPAD 227 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE---------ECCBCTTSCBCCHHH
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH---------HHHHHhccCCCChhh
Confidence 333 36889999999999999999999996543211000 000000000000 0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004732 627 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 665 (733)
Q Consensus 627 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 665 (733)
........+.+++.+||+.||++| |+.|+++.|++...
T Consensus 228 ~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 228 IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 011122358899999999999999 99999999986543
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.7e-35 Score=308.21 Aligned_cols=226 Identities=19% Similarity=0.290 Sum_probs=177.0
Q ss_pred cCcccc-CcccCCCcccEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHH-HhCCCCceeeEeeEEEe----CCeEE
Q 004732 393 NNFATD-NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMI-SALQHPNLVKLYGCCIE----GNQLL 465 (733)
Q Consensus 393 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 465 (733)
++|... +.||+|+||.||+|+. .+++.||||.+... ..+.+|++++ +..+||||+++++++.. +...+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 345555 7899999999999984 67899999998542 4567888887 66699999999999987 67789
Q ss_pred EEEEccCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecC---CCCeEEcccCccc
Q 004732 466 LIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLAK 541 (733)
Q Consensus 466 lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~kl~DfGla~ 541 (733)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998643 46999999999999999999999996 999999999999998 7889999999986
Q ss_pred cCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccC
Q 004732 542 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 621 (733)
Q Consensus 542 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (733)
.... ..++.++|||||||++|||++|+.||......... ......+..
T Consensus 169 ~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------~~~~~~~~~ 216 (299)
T 3m2w_A 169 ETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------PGMKTRIRM 216 (299)
T ss_dssp ECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCT
T ss_pred cccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh---------HHHHHHHhh
Confidence 4321 34677999999999999999999999654322110 001111110
Q ss_pred CCCCCCCH----HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004732 622 NPGSNFDK----EQVMVMINVALLCANASPTIRPSMSSVLRM 659 (733)
Q Consensus 622 ~~~~~~~~----~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 659 (733)
. ....+. .....+.+++.+||+.||++|||+.|+++.
T Consensus 217 ~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 217 G-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp T-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 011111 123458899999999999999999999863
No 250
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-35 Score=312.37 Aligned_cols=261 Identities=26% Similarity=0.386 Sum_probs=241.6
Q ss_pred ecccce--------eeeeccccccccc--cCCccccCCCCCCeeeccc-cccccccchhccCCCCCCEEEcccccccccC
Q 004732 13 WKQKTV--------NQKRVLKEQNLTG--VLPPKLAELTFLQDISLIA-NRLKGPIPKYLANISTLVNLTVQYNQFSGEL 81 (733)
Q Consensus 13 ~~~~~~--------~~~l~L~~n~l~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 81 (733)
|.|++| .+.|+|++|++++ .+|..|..+++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+
T Consensus 38 w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 117 (313)
T 1ogq_A 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI 117 (313)
T ss_dssp STTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEEC
T ss_pred CcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcC
Confidence 888766 4568899999999 9999999999999999995 9999999999999999999999999999999
Q ss_pred CccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccC-CCCEEEccCCCCccCCCCCCCCc
Q 004732 82 PEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWT-KLEKLFIQPSGLAGPIPSGIFSL 160 (733)
Q Consensus 82 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l 160 (733)
|..|..+++|++|+|++|.|++.+|..|..+++|++|+|++|++++.+|..+..++ +|+.|+|++|++++.+|..+..+
T Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l 197 (313)
T 1ogq_A 118 PDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC
T ss_pred CHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC
Confidence 99999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEe
Q 004732 161 ENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYF 239 (733)
Q Consensus 161 ~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 239 (733)
+ |+.|++++|.+....+..+... +|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++
T Consensus 198 ~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 275 (313)
T 1ogq_A 198 N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275 (313)
T ss_dssp C-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEEC
T ss_pred c-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEEC
Confidence 7 9999999999998877777766 899999999999977766 889999999999999999999999999999999999
Q ss_pred cCCcccccCChhh-hcCCCeeecccCcCCCCCCcccc
Q 004732 240 AGNLLTGAIPPWM-LERGDKIDLSYNNFTDGSAESSC 275 (733)
Q Consensus 240 ~~N~l~~~~p~~~-l~~l~~l~ls~N~l~~~~~~~~~ 275 (733)
++|.++|.+|... +++++.+++++|+..++.+...|
T Consensus 276 s~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 276 SFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp CSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred cCCcccccCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 9999999999865 78899999999985544443344
No 251
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.5e-36 Score=319.64 Aligned_cols=242 Identities=20% Similarity=0.200 Sum_probs=183.6
Q ss_pred hcCccccCcccCCCcccEEEcccCCCcEEEEEEccccC--------hhcHHHHHHHHHHHHhCC---------CCceeeE
Q 004732 392 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS--------KQGNREFINEIGMISALQ---------HPNLVKL 454 (733)
Q Consensus 392 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 454 (733)
.++|...+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+++++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45678889999999999999987 68999999986542 223477889999998886 7777777
Q ss_pred eeEEE------------------------------eCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 004732 455 YGCCI------------------------------EGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLA 504 (733)
Q Consensus 455 ~~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 504 (733)
.+++. +++..++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 77643 26789999999999976666543 46899999999999999999
Q ss_pred HHH-cCCCCCeecCCCCCCcEEecCCC--------------------CeEEcccCccccCcccCcccccccccCCCcccH
Q 004732 505 YLH-GESRIKVVHRDIKATNVLLDKDL--------------------NSKISDFGLAKLDEEENTHISTRVAGTIGYMAP 563 (733)
Q Consensus 505 ~LH-~~~~~~ivH~Dik~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP 563 (733)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 999 886 99999999999999887 8999999999865432 34799999999
Q ss_pred HHHhhCCCCccchhHhHHHH-HHHHHhCCCCCCccchhhHHHHHHHHHhhCcccccccCCCCCCCCHHHHHHHHHHHHHh
Q 004732 564 EYAMRGHLTEKADVYSFGIV-ALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLC 642 (733)
Q Consensus 564 E~~~~~~~~~~~Dv~s~Gvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 642 (733)
|++.+.. +.++||||+|++ .+++++|..||... .|.............................+.+++.+|
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHH
Confidence 9998655 899999998777 77788899887332 121111000000000011111112334567899999999
Q ss_pred hcCCCCCCCCHHHHH
Q 004732 643 ANASPTIRPSMSSVL 657 (733)
Q Consensus 643 ~~~~P~~RPt~~~vl 657 (733)
++.| |+.|++
T Consensus 320 L~~d-----sa~e~l 329 (336)
T 2vuw_A 320 LNFS-----SATDLL 329 (336)
T ss_dssp GGSS-----SHHHHH
T ss_pred hccC-----CHHHHH
Confidence 9965 888887
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-33 Score=334.02 Aligned_cols=258 Identities=31% Similarity=0.457 Sum_probs=236.3
Q ss_pred cceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceee
Q 004732 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLH 95 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 95 (733)
.+.+++|+|++|++++.+|..|..+++|+.|+|++|++++.+|..|+++++|++|+|++|.+++.+|..|+.+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 45688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC
Q 004732 96 LSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 96 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
|++|++++.+|..+.++++|++|+|++|++++.+|..|+++++|+.|+|++|++++.+|..+..+++|+.|++++|.+..
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCcccc----------------------------------------------------------------------cc-c
Q 004732 176 ATFPQL----------------------------------------------------------------------GN-M 184 (733)
Q Consensus 176 ~~~~~~----------------------------------------------------------------------~~-~ 184 (733)
..+..+ .. .
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 433221 11 2
Q ss_pred cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecc
Q 004732 185 KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLS 262 (733)
Q Consensus 185 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls 262 (733)
+|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..++.+++|+.|++++|+++|.+|..+ ++.|+.||++
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 58899999999999999999999999999999999999999999999999999999999999999988 7889999999
Q ss_pred cCcCCCCCCcc
Q 004732 263 YNNFTDGSAES 273 (733)
Q Consensus 263 ~N~l~~~~~~~ 273 (733)
+|+++|..|..
T Consensus 713 ~N~l~g~iP~~ 723 (768)
T 3rgz_A 713 NNNLSGPIPEM 723 (768)
T ss_dssp SSEEEEECCSS
T ss_pred CCcccccCCCc
Confidence 99998866543
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-33 Score=329.54 Aligned_cols=266 Identities=29% Similarity=0.410 Sum_probs=242.1
Q ss_pred eeeecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCc
Q 004732 10 FHFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLL 89 (733)
Q Consensus 10 ~~~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 89 (733)
+..+.+.+.++.|+|++|++++.+|..|..+++|+.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..|+.++
T Consensus 411 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred CHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 34456677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCC------------
Q 004732 90 NLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGI------------ 157 (733)
Q Consensus 90 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l------------ 157 (733)
+|++|+|++|++++.+|.++..+++|++|+|++|+++|.+|..++++++|+.|++++|+++|.+|..+
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999988777543
Q ss_pred ----------------------------------------------------------CCcCCcCeeecccccCCCCCcc
Q 004732 158 ----------------------------------------------------------FSLENLTDLRISDLNGPEATFP 179 (733)
Q Consensus 158 ----------------------------------------------------------~~l~~L~~L~l~~n~~~~~~~~ 179 (733)
..+++|+.|++++|.+....+.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 3457899999999999998888
Q ss_pred ccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh-hcCCC
Q 004732 180 QLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM-LERGD 257 (733)
Q Consensus 180 ~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-l~~l~ 257 (733)
.++.+ +|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|+.|++++|+++|.+|... +..+.
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~ 730 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 730 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSC
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCC
Confidence 88877 89999999999999999999999999999999999999999999999999999999999999999864 55666
Q ss_pred eeecccCcCCCCCCcccc
Q 004732 258 KIDLSYNNFTDGSAESSC 275 (733)
Q Consensus 258 ~l~ls~N~l~~~~~~~~~ 275 (733)
...+.+|+.-|+.+...|
T Consensus 731 ~~~~~gN~~Lcg~~l~~C 748 (768)
T 3rgz_A 731 PAKFLNNPGLCGYPLPRC 748 (768)
T ss_dssp GGGGCSCTEEESTTSCCC
T ss_pred HHHhcCCchhcCCCCcCC
Confidence 667778864444333333
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=6.7e-32 Score=284.11 Aligned_cols=251 Identities=19% Similarity=0.297 Sum_probs=228.5
Q ss_pred CCCCeeecccccccc--ccchhccCCCCCCEEEccc-ccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCE
Q 004732 41 TFLQDISLIANRLKG--PIPKYLANISTLVNLTVQY-NQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKD 117 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 117 (733)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 679999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcC-CcCeeecccccCCCCCccccccccccEEEcccCcc
Q 004732 118 FRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLE-NLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNI 196 (733)
Q Consensus 118 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l 196 (733)
|+|++|++++.+|..|.++++|++|+|++|++++.+|..++.++ +|+.|++++|.+....+..+...+|+.|++++|.+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l 209 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcc
Confidence 99999999999999999999999999999999999999999998 99999999999998888888888899999999999
Q ss_pred CCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCCCccc
Q 004732 197 TGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESS 274 (733)
Q Consensus 197 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~~~~ 274 (733)
++.+|..|..+++|+.|+|++|.+++.+|. +..+++|+.|++++|.+++.+|.++ +++|+.|++++|++++..+..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 999999999999999999999999987776 8889999999999999999999987 788999999999998765544
Q ss_pred ccccccccccccccccccC
Q 004732 275 CQKRSVTGIVSCLRSVQCP 293 (733)
Q Consensus 275 ~~~~~~~~~~~~~~~~~c~ 293 (733)
.....+..+....++..|+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TTGGGSCGGGTCSSSEEES
T ss_pred ccccccChHHhcCCCCccC
Confidence 3344444444444544443
No 255
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=8.5e-31 Score=290.96 Aligned_cols=144 Identities=19% Similarity=0.226 Sum_probs=127.7
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeecccccccccc-chhccCCCCCCEEEcccccccccCCccccCCcCCceee
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPI-PKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLH 95 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 95 (733)
..++.|+|++|++++..|..|..+++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 34788999999999999999999999999999999997555 56799999999999999999988899999999999999
Q ss_pred ccCccccccCCcc--ccCCCCCCEEEeeCCccccCCCcc-ccccCCCCEEEccCCCCccCCCCCCCCc
Q 004732 96 LSSNNFTGELPKT--FAKLTNMKDFRISDNQFTGQIPSF-IQNWTKLEKLFIQPSGLAGPIPSGIFSL 160 (733)
Q Consensus 96 Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~l 160 (733)
|++|++++.+|.. |..+++|++|+|++|++++..|.. +.++++|++|++++|++++..+..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 177 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF 177 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGG
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcc
Confidence 9999999766555 889999999999999999887776 8999999999999999998877766544
No 256
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=294.01 Aligned_cols=279 Identities=20% Similarity=0.206 Sum_probs=185.0
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.+.|+|++|+|++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|.++...+..|.++++|++|+|++
T Consensus 34 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 113 (477)
T 2id5_A 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113 (477)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTT
T ss_pred CcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCC
Confidence 45556666666665555666666666666666666655555666666666666666666643334455666666666666
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCcc------------------------CCC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAG------------------------PIP 154 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~------------------------~~p 154 (733)
|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++ ..+
T Consensus 114 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 114 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred CccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 66665555555555566666666665555555555555555555555555554 333
Q ss_pred CCCCCcCCcCeeecccccCCCCCc-cccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCC
Q 004732 155 SGIFSLENLTDLRISDLNGPEATF-PQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYD 233 (733)
Q Consensus 155 ~~l~~l~~L~~L~l~~n~~~~~~~-~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 233 (733)
..|..+++|+.|++++|......+ ..+...+|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++
T Consensus 194 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (477)
T 2id5_A 194 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLR 273 (477)
T ss_dssp TCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTT
T ss_pred hhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccccc
Confidence 444445555555555444333222 2223337888888889998665577899999999999999999888888999999
Q ss_pred CCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCCCcccccccccccccccccccccCCcee
Q 004732 234 VDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCPKTYY 297 (733)
Q Consensus 234 L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 297 (733)
|+.|++++|.+.+..|..+ +++|+.|++++|.+++...........+..+....+++.|.+...
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~ 339 (477)
T 2id5_A 274 LQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLL 339 (477)
T ss_dssp CCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGH
T ss_pred CCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchH
Confidence 9999999999998878776 688999999999998877665555566666666777777766543
No 257
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=1.1e-30 Score=290.06 Aligned_cols=282 Identities=16% Similarity=0.140 Sum_probs=186.8
Q ss_pred eecccceeeeeccccccccccC-CccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCcc--ccCC
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVL-PPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEE--LGSL 88 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l 88 (733)
.+.+.+.++.|+|++|.+.+.+ +..|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++.++.. |+.+
T Consensus 49 ~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 128 (455)
T 3v47_A 49 SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL 128 (455)
T ss_dssp TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTC
T ss_pred HhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCc
Confidence 3455667888888888887554 557888888888888888888777888888888888888888888655554 8888
Q ss_pred cCCceeeccCccccccCCcc-ccCCCCCCEEEeeCCccccCCCcccccc-------------------------------
Q 004732 89 LNLEKLHLSSNNFTGELPKT-FAKLTNMKDFRISDNQFTGQIPSFIQNW------------------------------- 136 (733)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------------------------- 136 (733)
++|++|+|++|++++..|.. +.++++|++|++++|++++..+..+..+
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~ 208 (455)
T 3v47_A 129 TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208 (455)
T ss_dssp TTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCT
T ss_pred ccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccc
Confidence 88888888888888776765 7788888888888888887766655543
Q ss_pred ---CCCCEEEccCCCCccCCCCCCCC---------------------------------------cCCcCeeecccccCC
Q 004732 137 ---TKLEKLFIQPSGLAGPIPSGIFS---------------------------------------LENLTDLRISDLNGP 174 (733)
Q Consensus 137 ---~~L~~L~l~~N~l~~~~p~~l~~---------------------------------------l~~L~~L~l~~n~~~ 174 (733)
++|+.|++++|++++..|..+.. .++|+.|++++|.+.
T Consensus 209 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 288 (455)
T 3v47_A 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF 288 (455)
T ss_dssp TTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCC
T ss_pred cccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccc
Confidence 45667777777665433221111 145666666666666
Q ss_pred CCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh-
Q 004732 175 EATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM- 252 (733)
Q Consensus 175 ~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~- 252 (733)
...+..+... +|+.|++++|.+++..|..|+++++|+.|+|++|.+++..|..|..+++|+.|++++|.+.+..|..+
T Consensus 289 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 289 ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 5555555444 56666666666666656666666666666666666665556666666666666666666665555544
Q ss_pred -hcCCCeeecccCcCCCCCCcccccccccccccccccccccC
Q 004732 253 -LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCP 293 (733)
Q Consensus 253 -l~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~ 293 (733)
+++|+.|++++|++++...........+..+....+++.|.
T Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 45666666666666655444333334444444444444444
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=1.4e-30 Score=300.83 Aligned_cols=259 Identities=20% Similarity=0.261 Sum_probs=225.0
Q ss_pred ceeeee---cccce-----eeeeccccccccccCCccccCCCCCCeeecccc----------------------------
Q 004732 8 LVFHFW---KQKTV-----NQKRVLKEQNLTGVLPPKLAELTFLQDISLIAN---------------------------- 51 (733)
Q Consensus 8 ~~~~~~---~~~~~-----~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n---------------------------- 51 (733)
..++.| .|++| ...|+|++|+++|.+|+.|+.|++|++|+|++|
T Consensus 64 ~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l 143 (636)
T 4eco_A 64 KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRM 143 (636)
T ss_dssp SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHT
T ss_pred CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHh
Confidence 346778 89888 467899999999999999999999999999988
Q ss_pred --------------------------------------------------ccccccchhccCCCCCCEEEccccccccc-
Q 004732 52 --------------------------------------------------RLKGPIPKYLANISTLVNLTVQYNQFSGE- 80 (733)
Q Consensus 52 --------------------------------------------------~l~~~~p~~l~~l~~L~~L~L~~N~l~~~- 80 (733)
++++ +|..|+++++|++|+|++|.+++.
T Consensus 144 ~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~ 222 (636)
T 4eco_A 144 HYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAEN 222 (636)
T ss_dssp HHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGG
T ss_pred hHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccc
Confidence 4555 888999999999999999999986
Q ss_pred ----------------CCcccc--CCcCCceeeccCccccccCCccccCCCCCCEEEeeCCc-ccc-CCCcccccc----
Q 004732 81 ----------------LPEELG--SLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ-FTG-QIPSFIQNW---- 136 (733)
Q Consensus 81 ----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~l---- 136 (733)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++
T Consensus 223 ~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~ 302 (636)
T 4eco_A 223 ICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP 302 (636)
T ss_dssp BSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSG
T ss_pred ccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccc
Confidence 999999 99999999999999999999999999999999999998 998 899988887
Q ss_pred --CCCCEEEccCCCCccCCCC--CCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCC-C
Q 004732 137 --TKLEKLFIQPSGLAGPIPS--GIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTK-L 210 (733)
Q Consensus 137 --~~L~~L~l~~N~l~~~~p~--~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~-L 210 (733)
++|+.|+|++|+++ .+|. .++.+++|+.|++++|.+....+ .+... +|+.|++++|.++ .+|..+..+++ |
T Consensus 303 ~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L 379 (636)
T 4eco_A 303 VGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQV 379 (636)
T ss_dssp GGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTC
T ss_pred cCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccC
Confidence 99999999999999 8898 89999999999999999984444 45444 7999999999998 77888889988 9
Q ss_pred cEEEccCCcccCCCCCCcCCCC--CCCEEEecCCcccccCChhhh---------cCCCeeecccCcCCCCCC
Q 004732 211 KVLDLSFNRLRGQIPSNFDDLY--DVDYIYFAGNLLTGAIPPWML---------ERGDKIDLSYNNFTDGSA 271 (733)
Q Consensus 211 ~~L~ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~~~l---------~~l~~l~ls~N~l~~~~~ 271 (733)
+.|++++|+++ .+|..+..+. +|+.|++++|.+.+..|..+. .+++.|++++|.++..+.
T Consensus 380 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~ 450 (636)
T 4eco_A 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPK 450 (636)
T ss_dssp CEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCT
T ss_pred cEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCH
Confidence 99999999998 7888777654 888999999998887776542 467888888888875443
No 259
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=3.5e-29 Score=288.44 Aligned_cols=281 Identities=19% Similarity=0.169 Sum_probs=192.9
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCcc-ccCCcCC
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEE-LGSLLNL 91 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 91 (733)
+.+.+.++.|+|++|+++ .+|..+..+++|++|+|++|.+++..|..+.++++|++|++++|.+.+.+|.. +..+++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 344455666666666666 55666666666666666666666655666666666666666666666555543 6667777
Q ss_pred ceeeccCccccccC--CccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCC-CCCcCCcCeeec
Q 004732 92 EKLHLSSNNFTGEL--PKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSG-IFSLENLTDLRI 168 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~L~l 168 (733)
++|+|++|.+++.. +..+..+++|++|++++|++++..|..|..+++|+.|++++|++.+..+.. +..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 77777777776554 566777777777777777777666777777777777777777777655443 667777777777
Q ss_pred ccccCCCCCccccccc-cccEEEcccCccCC---CCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcc
Q 004732 169 SDLNGPEATFPQLGNM-KMTKLILRNCNITG---ELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLL 244 (733)
Q Consensus 169 ~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~---~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 244 (733)
++|.+....+..+... +|+.|++++|.+++ ..+..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 7777776666655544 67778888877765 2335577777888888888888877777788888888888888888
Q ss_pred cccCChhh--hcCCCeeecccCcCCCCCCcccccccccccccccccccccCCc
Q 004732 245 TGAIPPWM--LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCPKT 295 (733)
Q Consensus 245 ~~~~p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 295 (733)
++..|..+ ++.+ .|++++|++++..+........+..+....+++.|.+.
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 77777666 5667 78888888877666555555555555555666666543
No 260
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=281.26 Aligned_cols=258 Identities=19% Similarity=0.180 Sum_probs=193.8
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+.+++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|+
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 131 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK 131 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCC
Confidence 44455566666666666666666666666666666666666644444556666666666666666655555555555555
Q ss_pred eeeccCccccccCCccccCCCCCCE------------------------EEeeCCccccCCCccccccCCCCEEEccCCC
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKD------------------------FRISDNQFTGQIPSFIQNWTKLEKLFIQPSG 148 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~------------------------L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 148 (733)
.|+|++|.+++..+..|.++++|+. |+|++|++.+..+..|..+++|+.|++++|.
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 5555555555544545555445554 4555555554445567778888888888888
Q ss_pred CccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCC
Q 004732 149 LAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSN 227 (733)
Q Consensus 149 l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 227 (733)
+.+.+|..+....+|+.|++++|.+.......+... +|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 291 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 291 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTT
T ss_pred cccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHH
Confidence 888888888888899999999999998876666655 8999999999999888889999999999999999999999999
Q ss_pred cCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCC
Q 004732 228 FDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 228 ~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~ 270 (733)
|..+++|+.|++++|.+++..+..+ +++|+.|++++|++.|..
T Consensus 292 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 292 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp BTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred hcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 9999999999999999996655554 788999999999998653
No 261
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=6.3e-30 Score=300.68 Aligned_cols=252 Identities=20% Similarity=0.244 Sum_probs=220.2
Q ss_pred cccce-----eeeeccccccccccCCccccCCCCCCeeec-cccccccc-------------------------------
Q 004732 14 KQKTV-----NQKRVLKEQNLTGVLPPKLAELTFLQDISL-IANRLKGP------------------------------- 56 (733)
Q Consensus 14 ~~~~~-----~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L-~~n~l~~~------------------------------- 56 (733)
.|++| ...|+|++|+++|.+|+.|++|++|+.|+| ++|.+.|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 88887 567899999999999999999999999999 77766554
Q ss_pred ---------------------------------------------cchhccCCCCCCEEEcccccccc------------
Q 004732 57 ---------------------------------------------IPKYLANISTLVNLTVQYNQFSG------------ 79 (733)
Q Consensus 57 ---------------------------------------------~p~~l~~l~~L~~L~L~~N~l~~------------ 79 (733)
+|..|+++++|++|+|++|.|++
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 78889999999999999999998
Q ss_pred -----cCCcccc--CCcCCceeeccCccccccCCccccCCCCCCEEEeeCCc-ccc-CCCccccccC-------CCCEEE
Q 004732 80 -----ELPEELG--SLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ-FTG-QIPSFIQNWT-------KLEKLF 143 (733)
Q Consensus 80 -----~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~l~-------~L~~L~ 143 (733)
.+|..++ ++++|+.|+|++|++.+.+|..|.++++|+.|+|++|+ |+| .+|..+++++ +|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 3899988 99999999999999999999999999999999999998 998 8888777776 999999
Q ss_pred ccCCCCccCCCC--CCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCC-CcEEEccCCc
Q 004732 144 IQPSGLAGPIPS--GIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTK-LKVLDLSFNR 219 (733)
Q Consensus 144 l~~N~l~~~~p~--~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~ls~N~ 219 (733)
|++|+++ .+|. .++++++|+.|+|++|.+..++ .++.+ +|+.|+|++|.++ .+|..+.++++ |+.|+|++|+
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 9999999 8898 8999999999999999998444 55554 8999999999999 88888999999 9999999999
Q ss_pred ccCCCCCCcCCCCC--CCEEEecCCcccccCChhh-------hcCCCeeecccCcCCCCC
Q 004732 220 LRGQIPSNFDDLYD--VDYIYFAGNLLTGAIPPWM-------LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 220 l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~p~~~-------l~~l~~l~ls~N~l~~~~ 270 (733)
++ .+|..+..+.. |+.|++++|.+.+.+|... ..+|+.|++++|++...+
T Consensus 631 L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp 689 (876)
T 4ecn_A 631 LK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFP 689 (876)
T ss_dssp CC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCC
T ss_pred CC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccC
Confidence 99 78888877654 9999999999988766432 246788888888887443
No 262
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=9.9e-29 Score=262.20 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=228.3
Q ss_pred eeecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcC
Q 004732 11 HFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLN 90 (733)
Q Consensus 11 ~~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 90 (733)
+.+.+.+..+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|+.+++
T Consensus 25 cp~~c~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (330)
T 1xku_A 25 CPFRCQCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK 101 (330)
T ss_dssp CCTTCEEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTT
T ss_pred CCCCCcCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCC
Confidence 34444556788899999998 5666554 78999999999999877778999999999999999999888999999999
Q ss_pred CceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCcc--CCCCCCCCcCCcCeeec
Q 004732 91 LEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAG--PIPSGIFSLENLTDLRI 168 (733)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~l 168 (733)
|++|+|++|+|+ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|++.. ..+..+..+++|+.|++
T Consensus 102 L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l 178 (330)
T 1xku_A 102 LERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI 178 (330)
T ss_dssp CCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC
T ss_pred CCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEEC
Confidence 999999999999 6776654 799999999999998778889999999999999999964 67888999999999999
Q ss_pred ccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccC
Q 004732 169 SDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAI 248 (733)
Q Consensus 169 ~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 248 (733)
++|.+...+.... .+|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+. .+
T Consensus 179 ~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 179 ADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp CSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 9999987654433 58999999999999988999999999999999999999888889999999999999999998 77
Q ss_pred Chhh--hcCCCeeecccCcCCCCCCcccccc
Q 004732 249 PPWM--LERGDKIDLSYNNFTDGSAESSCQK 277 (733)
Q Consensus 249 p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~ 277 (733)
|.++ +++|+.|++++|++++.+...+|..
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 7766 7889999999999998877777643
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.2e-31 Score=299.29 Aligned_cols=214 Identities=17% Similarity=0.102 Sum_probs=95.5
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
++.|+|++|++++..|..|..+++|++|+|++|.|++..| |+.+++|++|+|++|.|++. | ..++|+.|+|++
T Consensus 36 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~----~~~~L~~L~L~~ 108 (487)
T 3oja_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHAAN 108 (487)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-E----ECTTCCEEECCS
T ss_pred ccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-C----CCCCcCEEECcC
Confidence 4444444444444444444444444444444444443333 44444444444444444421 1 114444444444
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCC-CcCCcCeeecccccCCCCC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIF-SLENLTDLRISDLNGPEAT 177 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~l~~n~~~~~~ 177 (733)
|.|++..+. .+++|+.|+|++|+|++..|..|+++++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+....
T Consensus 109 N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 109 NNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 444433322 234444444444444444444444444444444444444444444443 3444444444444444331
Q ss_pred ccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccc
Q 004732 178 FPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT 245 (733)
Q Consensus 178 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 245 (733)
.. ....+|+.|+|++|.|++.+| .+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|++.
T Consensus 186 ~~-~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 186 GQ-VVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CC-CCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cc-ccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 11 112244444444444443222 24444444444444444442 3444444444444444444444
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.4e-29 Score=264.23 Aligned_cols=223 Identities=21% Similarity=0.283 Sum_probs=139.9
Q ss_pred CCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEe
Q 004732 41 TFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRI 120 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 120 (733)
++++.|+|++|.|+ .+|..++++++|++|+|++|.++ .+|..|+.+++|++|+|++|.|+ .+|..+.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45566666666665 55555555666666666666665 55555666666666666666665 55555666666666666
Q ss_pred eCCccccCCCccccc---------cCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEc
Q 004732 121 SDNQFTGQIPSFIQN---------WTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLIL 191 (733)
Q Consensus 121 ~~N~l~~~~~~~~~~---------l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l 191 (733)
++|++.+.+|..+.. +++|+.|+|++|+++ .+|..+..+++|+.|++++|.+...........+|+.|+|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDL 236 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEEC
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEEC
Confidence 665555555554443 666666666666665 5555566666666666666666554333222235666667
Q ss_pred ccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCC
Q 004732 192 RNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFT 267 (733)
Q Consensus 192 ~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~ 267 (733)
++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.+.+|.++ +++++.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 7777777777777777777777777777777777777777777777777777777777766 566677776666544
No 265
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=1.8e-29 Score=291.42 Aligned_cols=253 Identities=19% Similarity=0.250 Sum_probs=176.2
Q ss_pred eeecccceeeeecccccccccc-----------------CCcccc--CCCCCCeeeccccccccccchhccCCCCCCEEE
Q 004732 11 HFWKQKTVNQKRVLKEQNLTGV-----------------LPPKLA--ELTFLQDISLIANRLKGPIPKYLANISTLVNLT 71 (733)
Q Consensus 11 ~~~~~~~~~~~l~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 71 (733)
..+.+.+.++.|+|++|++++. +|+.+. ++++|++|+|++|++.+.+|..|+++++|++|+
T Consensus 200 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 279 (636)
T 4eco_A 200 KAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLIN 279 (636)
T ss_dssp GGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEE
T ss_pred HHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEE
Confidence 3455566677777777777775 777777 777777777777777777777777777777777
Q ss_pred ccccc-ccc-cCCccccCC------cCCceeeccCccccccCCc--cccCCCCCCEEEeeCCccccCCCccccccCCCCE
Q 004732 72 VQYNQ-FSG-ELPEELGSL------LNLEKLHLSSNNFTGELPK--TFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEK 141 (733)
Q Consensus 72 L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 141 (733)
|++|+ ++| .+|..++.+ ++|+.|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .|+++++|+.
T Consensus 280 Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~ 357 (636)
T 4eco_A 280 VACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLAS 357 (636)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESE
T ss_pred CcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCE
Confidence 77776 776 677776665 77777777777777 6776 77777777777777777777777 6777777777
Q ss_pred EEccCCCCccCCCCCCCCcCC-cCeeecccccCCCCCccccccc---cccEEEcccCccCCCCCcccc-------CCCCC
Q 004732 142 LFIQPSGLAGPIPSGIFSLEN-LTDLRISDLNGPEATFPQLGNM---KMTKLILRNCNITGELPRYLG-------KMTKL 210 (733)
Q Consensus 142 L~l~~N~l~~~~p~~l~~l~~-L~~L~l~~n~~~~~~~~~~~~~---~L~~L~l~~n~l~~~~p~~~~-------~l~~L 210 (733)
|+|++|+++ .+|..+..+++ |+.|++++|.+...+ ..+... +|+.|++++|.+++.+|..|. .+++|
T Consensus 358 L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L 435 (636)
T 4eco_A 358 LNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIP-NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINV 435 (636)
T ss_dssp EECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCC-SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCE
T ss_pred EECCCCccc-cccHhhhhhcccCcEEEccCCcCcccc-hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCC
Confidence 777777777 66777777777 777777777776433 333332 577777777777777777666 66677
Q ss_pred cEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhc----------CCCeeecccCcCCC
Q 004732 211 KVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLE----------RGDKIDLSYNNFTD 268 (733)
Q Consensus 211 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~----------~l~~l~ls~N~l~~ 268 (733)
+.|+|++|+++...+..+..+++|+.|++++|.++ .+|..... +|+.|++++|+++.
T Consensus 436 ~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 502 (636)
T 4eco_A 436 SSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502 (636)
T ss_dssp EEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCB
T ss_pred CEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCc
Confidence 77777777777333333445677777777777776 55554422 67777777777763
No 266
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2e-28 Score=260.13 Aligned_cols=254 Identities=19% Similarity=0.214 Sum_probs=225.2
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+..+.+++++++++ .+|..+. ++|+.|+|++|.|++..+..|.++++|++|+|++|.+++..|.+|+.+++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 105 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105 (332)
T ss_dssp SSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCC
T ss_pred CCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCC
Confidence 334456788999999998 6777664 7999999999999988888999999999999999999988899999999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc--cCCCCCCCCcCCcCeeeccc
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA--GPIPSGIFSLENLTDLRISD 170 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~l~~l~~L~~L~l~~ 170 (733)
+|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|+.|++++
T Consensus 106 ~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~ 181 (332)
T 2ft3_A 106 KLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISE 181 (332)
T ss_dssp EEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCS
T ss_pred EEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcC
Confidence 9999999999 7776665 89999999999999777778999999999999999996 4778888888 999999999
Q ss_pred ccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCCh
Q 004732 171 LNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPP 250 (733)
Q Consensus 171 n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 250 (733)
|.+...+.... .+|+.|++++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+. .+|.
T Consensus 182 n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 182 AKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp SBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 99988655433 58999999999999988899999999999999999999888889999999999999999998 7777
Q ss_pred hh--hcCCCeeecccCcCCCCCCccccc
Q 004732 251 WM--LERGDKIDLSYNNFTDGSAESSCQ 276 (733)
Q Consensus 251 ~~--l~~l~~l~ls~N~l~~~~~~~~~~ 276 (733)
.+ +++|+.|++++|++++......+.
T Consensus 259 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 259 GLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp TGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred hhhcCccCCEEECCCCCCCccChhHccc
Confidence 66 788999999999998876655543
No 267
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=8.4e-29 Score=259.79 Aligned_cols=245 Identities=16% Similarity=0.176 Sum_probs=150.3
Q ss_pred eeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccc--cCCccccCCcCCceeeccC
Q 004732 21 KRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSG--ELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 21 ~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~ 98 (733)
.++.++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..+..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4555566665 3444332 466666666666663333345666666666666666652 2245555666666666666
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCC-ccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC-C
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIP-SFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE-A 176 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~-~ 176 (733)
|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+.. .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 6666 455556666666666666666664433 456666666666666666666666666666666666666666654 2
Q ss_pred Cccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--h
Q 004732 177 TFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--L 253 (733)
Q Consensus 177 ~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l 253 (733)
.+..+... +|+.|++++|.+++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+..|..+ +
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 33333333 56666666666666666666666666666666666665555566666666666666666666655554 2
Q ss_pred -cCCCeeecccCcCCCC
Q 004732 254 -ERGDKIDLSYNNFTDG 269 (733)
Q Consensus 254 -~~l~~l~ls~N~l~~~ 269 (733)
++++.|++++|++.+.
T Consensus 247 ~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTCCEEECTTCCEECS
T ss_pred hccCCEEEccCCCeecc
Confidence 3566666666666554
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.5e-28 Score=260.25 Aligned_cols=223 Identities=25% Similarity=0.350 Sum_probs=209.4
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
....|+|++|+++ .+|+.+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|.++ .+|..|+.+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 3578899999999 78889999999999999999999 89999999999999999999999 899999999999999999
Q ss_pred CccccccCCccccC---------CCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeec
Q 004732 98 SNNFTGELPKTFAK---------LTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRI 168 (733)
Q Consensus 98 ~N~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l 168 (733)
+|++.+.+|..+.. +++|++|+|++|+|+ .+|..++++++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEEC
Confidence 99999999988765 999999999999999 89999999999999999999999 47778999999999999
Q ss_pred ccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccc
Q 004732 169 SDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT 245 (733)
Q Consensus 169 ~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 245 (733)
++|++....+..+... +|+.|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999998888777766 8999999999999999999999999999999999999999999999999999999988765
No 269
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=4.5e-30 Score=290.59 Aligned_cols=186 Identities=17% Similarity=0.123 Sum_probs=132.2
Q ss_pred cccCCCcccEEEcc-cCCCcEEEEEEccccC----------hhcHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEE
Q 004732 400 NIGEGGFGPVYKGL-LADGTAIAVKQLSSKS----------KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 400 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 467 (733)
..+.|++|.+..++ .-.|+.||||.+.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 56778888777766 4468999999986531 22346799999999999 799999999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||++|++|.++|.+. ..++.. +|+.||+.||+|+|++| ||||||||+|||++.++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999999754 356643 58999999999999997 9999999999999999999999999998765443
Q ss_pred cccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 548 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 548 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
. .....+||++|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 394 ~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 S-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred c-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3 2345679999999999865 5677899999999988877665443
No 270
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.8e-28 Score=254.50 Aligned_cols=250 Identities=18% Similarity=0.185 Sum_probs=216.5
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
..++.++++++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45788889998 456544 479999999999999887788999999999999999999888999999999999999999
Q ss_pred c-ccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 100 N-FTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 100 ~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
. ++...|..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|++++|.+.....
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 886668899999999999999999998889999999999999999999997777789999999999999999998777
Q ss_pred cccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChh-hhcCC
Q 004732 179 PQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPW-MLERG 256 (733)
Q Consensus 179 ~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~l 256 (733)
..+... +|+.|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|++.+..+.. +...+
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l 250 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWL 250 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHH
Confidence 666655 8999999999999988999999999999999999999877777999999999999999998776643 23344
Q ss_pred CeeecccCcCCCCCCc
Q 004732 257 DKIDLSYNNFTDGSAE 272 (733)
Q Consensus 257 ~~l~ls~N~l~~~~~~ 272 (733)
+.+..+.+.+.|..+.
T Consensus 251 ~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 251 QKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHCCSEECCCBEEESG
T ss_pred HhcccccCccccCCch
Confidence 4555666666554443
No 271
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.5e-28 Score=268.62 Aligned_cols=248 Identities=16% Similarity=0.124 Sum_probs=216.8
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
..++..+++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46777888888 5676665 78999999999999888999999999999999999999888899999999999999999
Q ss_pred cccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCC-CCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPS-GLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
+|++..+..|..+++|++|+|++|+|+...+..|.++++|+.|+|++| .+....+..|.++++|+.|++++|.+....
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP- 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC-
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc-
Confidence 999777777999999999999999999777778999999999999994 555444457889999999999999998763
Q ss_pred cccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCC
Q 004732 179 PQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERG 256 (733)
Q Consensus 179 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l 256 (733)
......+|+.|+|++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|++++|.+++..+..+ +++|
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 22333489999999999999999999999999999999999999999999999999999999999996555544 6889
Q ss_pred CeeecccCcCCCCCC
Q 004732 257 DKIDLSYNNFTDGSA 271 (733)
Q Consensus 257 ~~l~ls~N~l~~~~~ 271 (733)
+.|++++|++.|...
T Consensus 293 ~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 293 VELHLHHNPWNCDCD 307 (452)
T ss_dssp CEEECCSSCEECSTT
T ss_pred CEEEccCCCcCCCCC
Confidence 999999999876543
No 272
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=9.6e-28 Score=254.55 Aligned_cols=245 Identities=21% Similarity=0.264 Sum_probs=220.2
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeec
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 96 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 96 (733)
..++.|+|++|++++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 34678999999999988889999999999999999999888999999999999999999999 7787665 79999999
Q ss_pred cCccccccCCccccCCCCCCEEEeeCCcccc--CCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCC
Q 004732 97 SSNNFTGELPKTFAKLTNMKDFRISDNQFTG--QIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGP 174 (733)
Q Consensus 97 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 174 (733)
++|++++..+..|.++++|++|++++|+++. ..+..|.++++|+.|++++|+++ .+|..+. ++|+.|++++|.+.
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCC
Confidence 9999998778889999999999999999963 77889999999999999999998 5676665 89999999999999
Q ss_pred CCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh-
Q 004732 175 EATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM- 252 (733)
Q Consensus 175 ~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~- 252 (733)
...+..+... +|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+++..+..+
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 9877777665 8999999999999888889999999999999999999 788899999999999999999986555444
Q ss_pred -------hcCCCeeecccCcCCC
Q 004732 253 -------LERGDKIDLSYNNFTD 268 (733)
Q Consensus 253 -------l~~l~~l~ls~N~l~~ 268 (733)
...+..+++++|++..
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCG
T ss_pred CcccccccccccceEeecCcccc
Confidence 2567789999999864
No 273
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=2.5e-28 Score=281.25 Aligned_cols=258 Identities=18% Similarity=0.217 Sum_probs=234.8
Q ss_pred eecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccch-hccCCCCCCEEEcccccccccC--CccccCC
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPK-YLANISTLVNLTVQYNQFSGEL--PEELGSL 88 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l 88 (733)
.+.+.+.++.|+|++|.+++..|..+..+++|+.|+|++|.+.+.+|. .+.++++|++|+|++|.+++.. +..+..+
T Consensus 296 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 375 (606)
T 3t6q_A 296 GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375 (606)
T ss_dssp SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTC
T ss_pred hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccC
Confidence 455667899999999999999899999999999999999999977765 4999999999999999999766 7889999
Q ss_pred cCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCc-cccccCCCCEEEccCCCCccCCCCCCCCcCCcCeee
Q 004732 89 LNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPS-FIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLR 167 (733)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 167 (733)
++|++|+|++|++++..|..|..+++|+.|++++|++++..+. .|.++++|+.|++++|.+.+..|..+..+++|+.|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 9999999999999989999999999999999999999987665 489999999999999999998999999999999999
Q ss_pred cccccCCCCCc---cccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCc
Q 004732 168 ISDLNGPEATF---PQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNL 243 (733)
Q Consensus 168 l~~n~~~~~~~---~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 243 (733)
+++|.+..... ..+... +|+.|++++|.+++..|..|..+++|+.|+|++|++++..|..+..+++| .|++++|.
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~ 534 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc
Confidence 99999876322 334444 89999999999999999999999999999999999999999999999999 99999999
Q ss_pred ccccCChhh--hcCCCeeecccCcCCCCC
Q 004732 244 LTGAIPPWM--LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 244 l~~~~p~~~--l~~l~~l~ls~N~l~~~~ 270 (733)
+++..|..+ +++++.+++++|++.|..
T Consensus 535 l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 535 ISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 998777765 789999999999998753
No 274
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.6e-28 Score=255.99 Aligned_cols=252 Identities=16% Similarity=0.181 Sum_probs=219.7
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccc--cchhccCCCCCCEEEcccccccccCCccccCCcCCcee
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGP--IPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 94 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 94 (733)
+.+++|+|++|+++...+..|..+++|++|+|++|.++.. .+..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 3578899999999966666689999999999999999843 4778889999999999999999 688889999999999
Q ss_pred eccCccccccCC-ccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCcc-CCCCCCCCcCCcCeeeccccc
Q 004732 95 HLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAG-PIPSGIFSLENLTDLRISDLN 172 (733)
Q Consensus 95 ~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~l~~n~ 172 (733)
+|++|++++..+ ..+..+++|++|++++|++++..+..|..+++|++|++++|.+++ .+|..+..+++|+.|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999996554 579999999999999999999999999999999999999999987 589999999999999999999
Q ss_pred CCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCC-CCCEEEecCCcccccCCh
Q 004732 173 GPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY-DVDYIYFAGNLLTGAIPP 250 (733)
Q Consensus 173 ~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~ 250 (733)
+....+..+... +|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..++ +|+.|++++|++.+..+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 999877777665 899999999999988888899999999999999999999999999985 999999999999877553
Q ss_pred h-h---hcCCCeeecccCcCCCC
Q 004732 251 W-M---LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 251 ~-~---l~~l~~l~ls~N~l~~~ 269 (733)
. + +...+.+.+..+.+.|.
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~ 289 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECA 289 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEE
T ss_pred HHHHHHHHhhhhhhccccccccC
Confidence 2 1 34444444444544443
No 275
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.2e-28 Score=265.58 Aligned_cols=247 Identities=19% Similarity=0.171 Sum_probs=212.9
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
..++..+++++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 45677888888 6676665 78999999999999888889999999999999999999877788999999999999999
Q ss_pred cccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCC-CCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPS-GLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
+|++..+..|..+++|++|+|++|+|+...+..|.++++|+.|+|++| .+....+..|.++++|+.|++++|.+...+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP- 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-
Confidence 999666678999999999999999999777778999999999999985 455444457888999999999999988664
Q ss_pred cccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCC
Q 004732 179 PQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERG 256 (733)
Q Consensus 179 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l 256 (733)
......+|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.+++..+..+ +++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 22233489999999999998889999999999999999999999889999999999999999999996655554 6889
Q ss_pred CeeecccCcCCCCC
Q 004732 257 DKIDLSYNNFTDGS 270 (733)
Q Consensus 257 ~~l~ls~N~l~~~~ 270 (733)
+.|++++|++.|..
T Consensus 282 ~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 282 ERIHLHHNPWNCNC 295 (440)
T ss_dssp CEEECCSSCEECSS
T ss_pred CEEEcCCCCccCCC
Confidence 99999999987654
No 276
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=1e-27 Score=254.57 Aligned_cols=242 Identities=22% Similarity=0.270 Sum_probs=218.0
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+|+
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECC
Confidence 4688999999999988999999999999999999999888999999999999999999999 7787665 899999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccc--cCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFT--GQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
+|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|+.|++++|++++ +|..+. ++|+.|++++|.+..
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 99999777778999999999999999996 4778888888 99999999999994 777665 799999999999999
Q ss_pred CCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--
Q 004732 176 ATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM-- 252 (733)
Q Consensus 176 ~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-- 252 (733)
..+..+... +|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+++..+..+
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc
Confidence 887777665 8999999999999988889999999999999999999 788889999999999999999986555443
Q ss_pred ------hcCCCeeecccCcCC
Q 004732 253 ------LERGDKIDLSYNNFT 267 (733)
Q Consensus 253 ------l~~l~~l~ls~N~l~ 267 (733)
...++.+++++|++.
T Consensus 287 ~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 287 VGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SSCCSSSCCBSEEECCSSSSC
T ss_pred cccccccccccceEeecCccc
Confidence 245788999999986
No 277
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=4.8e-28 Score=278.90 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=75.0
Q ss_pred CCCCCCcCCcCeeecccccCCCCCc-cccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC-CCCCCcCC
Q 004732 154 PSGIFSLENLTDLRISDLNGPEATF-PQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG-QIPSNFDD 230 (733)
Q Consensus 154 p~~l~~l~~L~~L~l~~n~~~~~~~-~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~ 230 (733)
|..+..+++|+.|++++|.+....+ ..+... +|+.|++++|.+++..|..+.++++|+.|++++|.+++ .+|..+..
T Consensus 392 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 471 (606)
T 3vq2_A 392 SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN 471 (606)
T ss_dssp CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc
Confidence 4556667777777777777666554 334333 56666666666666666666666666666666666665 25666666
Q ss_pred CCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCCCcccc
Q 004732 231 LYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSC 275 (733)
Q Consensus 231 l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~~~~~ 275 (733)
+++|+.|++++|.+++..|..+ +++|+.|++++|++++..+...+
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 518 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHcc
Confidence 6666666666666665555544 45566666666666554444333
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1e-27 Score=260.51 Aligned_cols=249 Identities=17% Similarity=0.125 Sum_probs=157.9
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.+++++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 34556666666665444455666666666666666665555566666666666666666665555566666666666666
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCC------------------
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFS------------------ 159 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~------------------ 159 (733)
+|+++...+..|.++++|++|++++|++++..+..|.++++|+.|++++|++++.....+..
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 205 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPI 205 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCS
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCC
Confidence 66666333333566666666666666666655666666666666666666665431111111
Q ss_pred -------------------cCCcCeeecccccCCCCCcccccc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCc
Q 004732 160 -------------------LENLTDLRISDLNGPEATFPQLGN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNR 219 (733)
Q Consensus 160 -------------------l~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~ 219 (733)
.++|+.|++++|.+... ..+.. .+|+.|++++|.+++..|..|..+++|+.|+|++|+
T Consensus 206 ~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 283 (390)
T 3o6n_A 206 AVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283 (390)
T ss_dssp SCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSC
T ss_pred cceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCc
Confidence 12455555555555543 22333 267777777777777777777777788888888887
Q ss_pred ccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCC
Q 004732 220 LRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 220 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~ 270 (733)
+++ +|..+..+++|+.|++++|.+. .+|..+ +++|+.|++++|+++...
T Consensus 284 l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~ 334 (390)
T 3o6n_A 284 LVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 334 (390)
T ss_dssp CCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred Ccc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC
Confidence 774 4555667777888888888777 444444 677788888888776553
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=7.4e-28 Score=276.24 Aligned_cols=248 Identities=18% Similarity=0.138 Sum_probs=171.4
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
++.+++.+|.++...+..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 45566777777766555667777777777777777766666777777777777777777766666677777777777777
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCc------------------
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSL------------------ 160 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l------------------ 160 (733)
|.|++..+..|.++++|++|+|++|.|++..|..|+++++|+.|+|++|++++..+..+..+
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~ 212 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIA 212 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCch
Confidence 77774444456777777777777777777667777777777777777777765322211111
Q ss_pred -------------------CCcCeeecccccCCCCCcccccc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcc
Q 004732 161 -------------------ENLTDLRISDLNGPEATFPQLGN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRL 220 (733)
Q Consensus 161 -------------------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l 220 (733)
++|+.|+|++|.+... ..+.. .+|+.|+|++|.+++.+|..|+.+++|+.|+|++|.+
T Consensus 213 L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (597)
T 3oja_B 213 VEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290 (597)
T ss_dssp CSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC
T ss_pred hheeeccCCcccccccccCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC
Confidence 2344555555554442 22333 3677888888888877777888888888888888888
Q ss_pred cCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCC
Q 004732 221 RGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 221 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~ 270 (733)
++ +|..+..+++|+.|++++|.+. .+|..+ +++|+.|++++|++++.+
T Consensus 291 ~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~ 340 (597)
T 3oja_B 291 VA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 340 (597)
T ss_dssp CE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred CC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC
Confidence 75 5666677788888888888887 455554 677888888888877653
No 280
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.6e-28 Score=272.99 Aligned_cols=248 Identities=18% Similarity=0.220 Sum_probs=150.2
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|+
T Consensus 22 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~ 98 (520)
T 2z7x_B 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLS 98 (520)
T ss_dssp TCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECC
T ss_pred cccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEecc
Confidence 4556666666666555556666666666666666666555666666666666666666665 34443 55566666666
Q ss_pred Cccccc-cCCccccCCCCCCEEEeeCCccc-------------------------cCCCccccccC--------------
Q 004732 98 SNNFTG-ELPKTFAKLTNMKDFRISDNQFT-------------------------GQIPSFIQNWT-------------- 137 (733)
Q Consensus 98 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~-------------------------~~~~~~~~~l~-------------- 137 (733)
+|.+++ .+|..|+++++|++|++++|+|+ +..|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 178 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEF 178 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcch
Confidence 666654 34555555555555555555443 22233333211
Q ss_pred ---------------------------------------------------------------------CCCEEEccCCC
Q 004732 138 ---------------------------------------------------------------------KLEKLFIQPSG 148 (733)
Q Consensus 138 ---------------------------------------------------------------------~L~~L~l~~N~ 148 (733)
+|++|++++|+
T Consensus 179 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 258 (520)
T 2z7x_B 179 HFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVK 258 (520)
T ss_dssp CCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEE
T ss_pred hhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeeccc
Confidence 45566666666
Q ss_pred CccCCCCCC-----------------------------------------------------CCcCCcCeeecccccCCC
Q 004732 149 LAGPIPSGI-----------------------------------------------------FSLENLTDLRISDLNGPE 175 (733)
Q Consensus 149 l~~~~p~~l-----------------------------------------------------~~l~~L~~L~l~~n~~~~ 175 (733)
++|.+|..+ ..+++|+.|++++|.+..
T Consensus 259 l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 259 LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp EESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCT
T ss_pred ccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccCh
Confidence 665555544 456677777777777777
Q ss_pred CCccccccc-cccEEEcccCccCC--CCCccccCCCCCcEEEccCCcccCCCCC-CcCCCCCCCEEEecCCcccccCChh
Q 004732 176 ATFPQLGNM-KMTKLILRNCNITG--ELPRYLGKMTKLKVLDLSFNRLRGQIPS-NFDDLYDVDYIYFAGNLLTGAIPPW 251 (733)
Q Consensus 176 ~~~~~~~~~-~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~ 251 (733)
..+..+... +|+.|++++|++++ .+|..++.+++|+.|++++|++++.+|. .+..+++|+.|++++|.+++..|..
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 418 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGS
T ss_pred hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhh
Confidence 555555544 67777777777775 4456677777777777777777764444 3666666777777777666555555
Q ss_pred hhcCCCeeecccCcCCC
Q 004732 252 MLERGDKIDLSYNNFTD 268 (733)
Q Consensus 252 ~l~~l~~l~ls~N~l~~ 268 (733)
+.++++.|++++|+++.
T Consensus 419 l~~~L~~L~Ls~N~l~~ 435 (520)
T 2z7x_B 419 LPPRIKVLDLHSNKIKS 435 (520)
T ss_dssp CCTTCCEEECCSSCCCC
T ss_pred hcccCCEEECCCCcccc
Confidence 44556666666666653
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=6.9e-28 Score=261.90 Aligned_cols=252 Identities=19% Similarity=0.235 Sum_probs=213.0
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+.++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|+.+++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 44567789999999999988888999999999999999999988888899999999999999999944444479999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCcccccc------------------------------------
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNW------------------------------------ 136 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------------------------------ 136 (733)
+|+|++|.+++..|..|..+++|++|++++|++++.....+.++
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~ 224 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 224 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccc
Confidence 99999999998888889999999999999999986432222222
Q ss_pred -CCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEE
Q 004732 137 -TKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLD 214 (733)
Q Consensus 137 -~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 214 (733)
++|+.|++++|++++. ..+..+++|+.|++++|.+....+..+... +|+.|+|++|.+++ +|..+..+++|+.|+
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 2456666666666642 568889999999999999998877777665 89999999999995 566778899999999
Q ss_pred ccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCC
Q 004732 215 LSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDG 269 (733)
Q Consensus 215 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~ 269 (733)
|++|+++ .+|..+..+++|+.|++++|.++. +|...+++++.|++++|++.+.
T Consensus 302 L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 302 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcce-ecCccccccCcCCEEECCCCccce-eCchhhccCCEEEcCCCCccch
Confidence 9999999 577778899999999999999984 4555688999999999998764
No 282
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=2.6e-27 Score=270.03 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=77.7
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeec
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 96 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 96 (733)
+.+++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 34677778888777777777777788888888888877777777777777777777777777 56655 6777777777
Q ss_pred cCccccc-cCCccccCCCCCCEEEeeCCccc
Q 004732 97 SSNNFTG-ELPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 97 s~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
++|++++ .+|..|+++++|++|+|++|+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~ 159 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccc
Confidence 7777775 23566777777777777766654
No 283
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.9e-27 Score=263.52 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=211.3
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
..+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 46889999999999999999999999999999999998888999999999999999999997667779999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCC-ccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDN-QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEA 176 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~ 176 (733)
+|+|+...+..|.++++|+.|+|++| .+....+..|.++++|+.|+|++|++++ +| .+..+++|+.|+|++|.+...
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCccc
Confidence 99999777778999999999999995 5554445579999999999999999995 44 588999999999999999998
Q ss_pred Cccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCCh
Q 004732 177 TFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPP 250 (733)
Q Consensus 177 ~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 250 (733)
.+..+... +|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++.+....
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 88877766 899999999999999999999999999999999999988888899999999999999999877654
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=2e-27 Score=283.54 Aligned_cols=263 Identities=17% Similarity=0.156 Sum_probs=181.8
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeecccccccccc-chhccCCCCCCEEEcccccccccCCccccCCcCCceee
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPI-PKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLH 95 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 95 (733)
+.++.|+|++|.|++..|..|..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|.+|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 34677788888888777778888888888888888555444 66778888888888888888777777788888888888
Q ss_pred ccCccccccCCcc--ccCCCCCCEEEeeCCccccCCC-ccccccCCCCEEEccCCCCccCCCCCCCCc--CC--------
Q 004732 96 LSSNNFTGELPKT--FAKLTNMKDFRISDNQFTGQIP-SFIQNWTKLEKLFIQPSGLAGPIPSGIFSL--EN-------- 162 (733)
Q Consensus 96 Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l--~~-------- 162 (733)
|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 8888887656554 7778888888888888776544 467778888888888777776655555444 33
Q ss_pred ----------------------cCeeecccccCCCCCcccc---------------------------------------
Q 004732 163 ----------------------LTDLRISDLNGPEATFPQL--------------------------------------- 181 (733)
Q Consensus 163 ----------------------L~~L~l~~n~~~~~~~~~~--------------------------------------- 181 (733)
|+.|++++|.+....+..+
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 4555555553332211111
Q ss_pred ccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCee
Q 004732 182 GNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKI 259 (733)
Q Consensus 182 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l 259 (733)
...+|+.|++++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+.+..|..+ +++|+.|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 01246677777777776667777777777777777777777777777777777777777777776666555 6677777
Q ss_pred ecccCcCCCCCCcccccccc
Q 004732 260 DLSYNNFTDGSAESSCQKRS 279 (733)
Q Consensus 260 ~ls~N~l~~~~~~~~~~~~~ 279 (733)
++++|++....+........
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCC
T ss_pred ECCCCCCCccChhhhcCCCC
Confidence 77777776655544433333
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=262.13 Aligned_cols=231 Identities=15% Similarity=0.155 Sum_probs=211.0
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
..+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 46789999999999999999999999999999999998888999999999999999999996666689999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCC-ccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDN-QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEA 176 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~ 176 (733)
+|.|+...+..|.++++|++|+|++| .+....+..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+...
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 99999777788999999999999995 455444558999999999999999998 556 588999999999999999998
Q ss_pred Cccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCCh
Q 004732 177 TFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPP 250 (733)
Q Consensus 177 ~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 250 (733)
.+..+... +|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++.+....
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 88777766 899999999999999999999999999999999999988888899999999999999999876653
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=5e-28 Score=277.68 Aligned_cols=252 Identities=19% Similarity=0.229 Sum_probs=216.7
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+.++.|+|++|+|++..|..|..+++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 44567789999999999999999999999999999999999988888899999999999999999955555679999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCcccccc------------------------------------
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNW------------------------------------ 136 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------------------------------ 136 (733)
+|+|++|.|++..|..|.++++|++|+|++|+|++.....+.++
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~ 230 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 230 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSC
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCccccccccc
Confidence 99999999998888899999999999999999986533332222
Q ss_pred -CCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEE
Q 004732 137 -TKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLD 214 (733)
Q Consensus 137 -~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 214 (733)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+....+..+..+ +|+.|+|++|.+++ +|..+..+++|+.|+
T Consensus 231 ~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 235566666666654 3678889999999999999999888777766 89999999999996 577778899999999
Q ss_pred ccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCC
Q 004732 215 LSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDG 269 (733)
Q Consensus 215 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~ 269 (733)
|++|.++ .+|..+..+++|+.|++++|.+.+. |...+++|+.|++++|++.|.
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-ChhhcCCCCEEEeeCCCCCCh
Confidence 9999999 6888889999999999999999854 555578999999999998754
No 287
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=269.85 Aligned_cols=245 Identities=18% Similarity=0.134 Sum_probs=173.6
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
+.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 45778888888 4666665 78888888888888777777888888888888888888777778888888888888888
Q ss_pred cccccCCccccCCCCCCEEEeeCCcccc-CCCccccccCCCCEEEccCCCCc-------------------------cCC
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTG-QIPSFIQNWTKLEKLFIQPSGLA-------------------------GPI 153 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~-------------------------~~~ 153 (733)
+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|+++ +..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~ 156 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCC
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccc
Confidence 887 56655 77888888888888876 46777777777777777777663 223
Q ss_pred CCCCCCcC------------------------------------------------------------------------
Q 004732 154 PSGIFSLE------------------------------------------------------------------------ 161 (733)
Q Consensus 154 p~~l~~l~------------------------------------------------------------------------ 161 (733)
|..+..+.
T Consensus 157 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHH
T ss_pred cccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHH
Confidence 44443322
Q ss_pred -----------CcCeeecccccCCCCCcccc-------------------------------------------------
Q 004732 162 -----------NLTDLRISDLNGPEATFPQL------------------------------------------------- 181 (733)
Q Consensus 162 -----------~L~~L~l~~n~~~~~~~~~~------------------------------------------------- 181 (733)
+|+.|++++|.+....+..+
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccc
Confidence 45556666555442221111
Q ss_pred ----cc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC--CCCCCcCCCCCCCEEEecCCcccccCChhh--
Q 004732 182 ----GN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG--QIPSNFDDLYDVDYIYFAGNLLTGAIPPWM-- 252 (733)
Q Consensus 182 ----~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-- 252 (733)
.. .+|+.|++++|.+++.+|..++++++|+.|+|++|++++ .+|..+..+++|+.|++++|.+.+.+|...
T Consensus 317 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 396 (520)
T 2z7x_B 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCS 396 (520)
T ss_dssp CCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCC
T ss_pred ccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhc
Confidence 12 267788888888887777778888888888888888875 455667778888888888888876566542
Q ss_pred -hcCCCeeecccCcCCCCC
Q 004732 253 -LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 253 -l~~l~~l~ls~N~l~~~~ 270 (733)
+++|+.|++++|.+++..
T Consensus 397 ~l~~L~~L~Ls~N~l~~~~ 415 (520)
T 2z7x_B 397 WTKSLLSLNMSSNILTDTI 415 (520)
T ss_dssp CCTTCCEEECCSSCCCGGG
T ss_pred cCccCCEEECcCCCCCcch
Confidence 567788888888776543
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.3e-28 Score=258.95 Aligned_cols=245 Identities=18% Similarity=0.217 Sum_probs=209.1
Q ss_pred cceeeeeccccccccccCCccccCCCCCCeeeccccccc-cccchhcc-------CCCCCCEEEcccccccccCCccc--
Q 004732 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLK-GPIPKYLA-------NISTLVNLTVQYNQFSGELPEEL-- 85 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~l~-------~l~~L~~L~L~~N~l~~~~p~~~-- 85 (733)
...++.+++++|++ .+|..+... |+.|+|++|.++ +.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 44577888999999 788877755 999999999994 56777666 79999999999999999999986
Q ss_pred cCCcCCceeeccCccccccCCccccCC-----CCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC--CCCCC-
Q 004732 86 GSLLNLEKLHLSSNNFTGELPKTFAKL-----TNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP--IPSGI- 157 (733)
Q Consensus 86 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~l- 157 (733)
+.+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..+..|+++++|++|+|++|++.+. ++..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 9999999999999999976 8888887 9999999999999988889999999999999999998765 33344
Q ss_pred -CCcCCcCeeecccccCCCCCc---ccccc-ccccEEEcccCccCCCCC-ccccCCCCCcEEEccCCcccCCCCCCcCCC
Q 004732 158 -FSLENLTDLRISDLNGPEATF---PQLGN-MKMTKLILRNCNITGELP-RYLGKMTKLKVLDLSFNRLRGQIPSNFDDL 231 (733)
Q Consensus 158 -~~l~~L~~L~l~~n~~~~~~~---~~~~~-~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 231 (733)
..+++|+.|++++|.+..... ..+.. .+|+.|++++|.+++.+| ..+..+++|+.|+|++|+|+ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 889999999999999984321 22223 489999999999998775 55677899999999999999 7888776
Q ss_pred CCCCEEEecCCcccccCChh-hhcCCCeeecccCcCCCC
Q 004732 232 YDVDYIYFAGNLLTGAIPPW-MLERGDKIDLSYNNFTDG 269 (733)
Q Consensus 232 ~~L~~L~l~~N~l~~~~p~~-~l~~l~~l~ls~N~l~~~ 269 (733)
++|+.|++++|++++. |.. .+++|+.|++++|++++.
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTCC
T ss_pred CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCCC
Confidence 8999999999999976 552 278899999999999763
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=3.5e-27 Score=272.87 Aligned_cols=282 Identities=17% Similarity=0.156 Sum_probs=222.5
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
..++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+.+|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 46889999999998888899999999999999999998778889999999999999999997666789999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCcccc-CCCccccccCCCCEEEccCCCCccCCCCCCC------------------
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTG-QIPSFIQNWTKLEKLFIQPSGLAGPIPSGIF------------------ 158 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~------------------ 158 (733)
+|+|++..+..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|+|++..+..+.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999997777789999999999999999975 4678889999999999999887643221110
Q ss_pred --------------------------------------------------------------------------------
Q 004732 159 -------------------------------------------------------------------------------- 158 (733)
Q Consensus 159 -------------------------------------------------------------------------------- 158 (733)
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence
Q ss_pred ----------------------------------------------------------------------------CcCC
Q 004732 159 ----------------------------------------------------------------------------SLEN 162 (733)
Q Consensus 159 ----------------------------------------------------------------------------~l~~ 162 (733)
.+++
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~ 372 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 372 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTT
T ss_pred ccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccc
Confidence 1223
Q ss_pred cCeeecccccCCCCC-----------------------------------------------------------------
Q 004732 163 LTDLRISDLNGPEAT----------------------------------------------------------------- 177 (733)
Q Consensus 163 L~~L~l~~n~~~~~~----------------------------------------------------------------- 177 (733)
|+.|++++|.+....
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~l 452 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEEC
T ss_pred cccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 334444443321100
Q ss_pred ---------cccccc-ccccEEEcccCcc-CCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccc
Q 004732 178 ---------FPQLGN-MKMTKLILRNCNI-TGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTG 246 (733)
Q Consensus 178 ---------~~~~~~-~~L~~L~l~~n~l-~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 246 (733)
+..+.. .+++.|++++|.+ .+.+|..|..+++|+.|+|++|+|++..|..|.++++|+.|++++|.+++
T Consensus 453 s~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~ 532 (635)
T 4g8a_A 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532 (635)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCB
T ss_pred cccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCC
Confidence 000000 1356677777764 44577889999999999999999999999999999999999999999998
Q ss_pred cCChhh--hcCCCeeecccCcCCCCCCcccccc-cccccccccccccccCCceeee
Q 004732 247 AIPPWM--LERGDKIDLSYNNFTDGSAESSCQK-RSVTGIVSCLRSVQCPKTYYSL 299 (733)
Q Consensus 247 ~~p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~-~~~~~~~~~~~~~~c~~~~~~~ 299 (733)
..|..+ +++|+.||+++|++++..+...... ..+..+-...+++.|.+...++
T Consensus 533 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~ 588 (635)
T 4g8a_A 533 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 588 (635)
T ss_dssp CCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHH
T ss_pred CChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHH
Confidence 777766 7899999999999998877766554 4566666778899998765444
No 290
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=6.5e-27 Score=273.18 Aligned_cols=283 Identities=20% Similarity=0.214 Sum_probs=225.5
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccc--cchhccCC--CCCCEEEcccccccccCCccccCC
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGP--IPKYLANI--STLVNLTVQYNQFSGELPEELGSL 88 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l 88 (733)
+...+.++.|+|++|++++..+..|..+++|++|+|++|.+++. ....|..+ ++|+.|+|++|++++..|.+|..+
T Consensus 325 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 404 (680)
T 1ziw_A 325 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWL 404 (680)
T ss_dssp TTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCC
Confidence 34566788888888999888888888888888888888875432 22334433 578888888899988888889999
Q ss_pred cCCceeeccCccccccCC-ccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc--cCCCCCCCCcCCcCe
Q 004732 89 LNLEKLHLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA--GPIPSGIFSLENLTD 165 (733)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~l~~l~~L~~ 165 (733)
++|+.|+|++|.+++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +.+|..+..+++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 999999999999987666 67888999999999999999888888999999999999999887 567888999999999
Q ss_pred eecccccCCCCCccccccc-cccEEEcccCccCCCCC--------ccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCE
Q 004732 166 LRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELP--------RYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDY 236 (733)
Q Consensus 166 L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p--------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 236 (733)
|++++|.+....+..+... +|+.|++++|.+++..+ ..|.++++|+.|+|++|+++...+..|..+++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 9999999988877766655 79999999999886422 23788899999999999999555567889999999
Q ss_pred EEecCCcccccCChhh--hcCCCeeecccCcCCCCCCcccc-cccccccccccccccccCCc
Q 004732 237 IYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSC-QKRSVTGIVSCLRSVQCPKT 295 (733)
Q Consensus 237 L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~ 295 (733)
|++++|.+++..+..+ +++|+.|++++|++++..+.... ....+..+....+++.|.+.
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 9999999985544443 57889999999998877655433 33445555566678888765
No 291
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=4.4e-27 Score=268.17 Aligned_cols=245 Identities=18% Similarity=0.112 Sum_probs=185.9
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
+.+++++|++++ +|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 578899999885 676554 78899999999998777788999999999999999998877888999999999999999
Q ss_pred cccccCCccccCCCCCCEEEeeCCcccc-CCCccccccCCCCEEEccCCCCccC-------------------------C
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTG-QIPSFIQNWTKLEKLFIQPSGLAGP-------------------------I 153 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~-------------------------~ 153 (733)
+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~ 187 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGE 187 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSS
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccC
Confidence 988 67765 78899999999999886 3467888888888888888876531 2
Q ss_pred CCCCCCcC------------------------------------------------------------------------
Q 004732 154 PSGIFSLE------------------------------------------------------------------------ 161 (733)
Q Consensus 154 p~~l~~l~------------------------------------------------------------------------ 161 (733)
|..+..+.
T Consensus 188 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~ 267 (562)
T 3a79_B 188 TESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSV 267 (562)
T ss_dssp CCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHH
T ss_pred cccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHH
Confidence 22222211
Q ss_pred ---------CcCeeecccccCCCCCcccc---------------------------------------------------
Q 004732 162 ---------NLTDLRISDLNGPEATFPQL--------------------------------------------------- 181 (733)
Q Consensus 162 ---------~L~~L~l~~n~~~~~~~~~~--------------------------------------------------- 181 (733)
+|+.|++++|.+....+..+
T Consensus 268 ~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~ 347 (562)
T 3a79_B 268 KLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV 347 (562)
T ss_dssp HHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC
T ss_pred HHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc
Confidence 45566666665553222211
Q ss_pred --cc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCC--CCCCcCCCCCCCEEEecCCcccccCChhh---h
Q 004732 182 --GN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQ--IPSNFDDLYDVDYIYFAGNLLTGAIPPWM---L 253 (733)
Q Consensus 182 --~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---l 253 (733)
.. .+|+.|++++|.+++.+|..++++++|+.|+|++|++++. +|..+..+++|+.|++++|.+.+.+|... +
T Consensus 348 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l 427 (562)
T 3a79_B 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA 427 (562)
T ss_dssp CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC
T ss_pred CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc
Confidence 22 3688888888888888888888888888888888888863 34668888888888888888887666543 5
Q ss_pred cCCCeeecccCcCCCCC
Q 004732 254 ERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 254 ~~l~~l~ls~N~l~~~~ 270 (733)
++++.|++++|++++..
T Consensus 428 ~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 428 ESILVLNLSSNMLTGSV 444 (562)
T ss_dssp TTCCEEECCSSCCCGGG
T ss_pred ccCCEEECCCCCCCcch
Confidence 77888888888876543
No 292
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=3.1e-27 Score=277.89 Aligned_cols=247 Identities=21% Similarity=0.235 Sum_probs=216.5
Q ss_pred ccceeeeeccccccccccCCccccCCCCCCeeeccccc-ccc-ccchhccCCC-------CCCEEEcccccccccCCc--
Q 004732 15 QKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANR-LKG-PIPKYLANIS-------TLVNLTVQYNQFSGELPE-- 83 (733)
Q Consensus 15 ~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~-- 83 (733)
+.+.++.|+|++|++.+.+|..|.++++|+.|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 78889999999999999999999999999999999998 998 8998777766 9999999999999 8998
Q ss_pred cccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCC-CCEEEccCCCCccCCCCCCCCcCC
Q 004732 84 ELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTK-LEKLFIQPSGLAGPIPSGIFSLEN 162 (733)
Q Consensus 84 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~l~~l~~ 162 (733)
.|+++++|+.|+|++|+|+ .+| .|..+++|+.|+|++|+|+ .+|..+.++++ |+.|+|++|+|+ .+|..+..++.
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~ 643 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV 643 (876)
T ss_dssp HHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS
T ss_pred hhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcccc
Confidence 9999999999999999999 888 8999999999999999999 89999999999 999999999999 88988887755
Q ss_pred --cCeeecccccCCCCCccc------cccccccEEEcccCccCCCCCcc-ccCCCCCcEEEccCCcccCCCCCCcCCC--
Q 004732 163 --LTDLRISDLNGPEATFPQ------LGNMKMTKLILRNCNITGELPRY-LGKMTKLKVLDLSFNRLRGQIPSNFDDL-- 231 (733)
Q Consensus 163 --L~~L~l~~n~~~~~~~~~------~~~~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l-- 231 (733)
|+.|++++|.+....+.. +...+|+.|+|++|.++ .+|.. +..+++|+.|+|++|+|+ .+|..+...
T Consensus 644 ~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~ 721 (876)
T 4ecn_A 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKD 721 (876)
T ss_dssp SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTT
T ss_pred CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccc
Confidence 999999999997754322 23347999999999999 55555 458999999999999999 566654432
Q ss_pred ------CCCCEEEecCCcccccCChhh----hcCCCeeecccCcCCCC
Q 004732 232 ------YDVDYIYFAGNLLTGAIPPWM----LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 232 ------~~L~~L~l~~N~l~~~~p~~~----l~~l~~l~ls~N~l~~~ 269 (733)
++|+.|++++|.++ .+|..+ +++|+.|++++|++++.
T Consensus 722 ~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~l 768 (876)
T 4ecn_A 722 GNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSF 768 (876)
T ss_dssp SCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred ccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCcc
Confidence 38999999999998 677765 47899999999999874
No 293
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=6e-27 Score=279.40 Aligned_cols=259 Identities=17% Similarity=0.141 Sum_probs=214.4
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccC-CccccCCcCCceeeccC
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGEL-PEELGSLLNLEKLHLSS 98 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~ 98 (733)
+..+.++++++ .+|. -.++|++|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 45678889999 4565 4589999999999999999999999999999999999666566 78899999999999999
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCcc--ccccCCCCEEEccCCCCccCCC-CCCCCcCCcCeeecccccCCC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSF--IQNWTKLEKLFIQPSGLAGPIP-SGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~~ 175 (733)
|.|++..|..|.++++|++|+|++|++++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|+.|++++|.+..
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999889999999999999999999999866655 9999999999999999997655 579999999999999999877
Q ss_pred CCcccccc---------------------------------ccccEEEcccCccCCCCCccccC----------------
Q 004732 176 ATFPQLGN---------------------------------MKMTKLILRNCNITGELPRYLGK---------------- 206 (733)
Q Consensus 176 ~~~~~~~~---------------------------------~~L~~L~l~~n~l~~~~p~~~~~---------------- 206 (733)
..+..+.. .+|+.|++++|.+++.++..+..
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 65443322 12677777777666555544332
Q ss_pred ----------------------CCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecc
Q 004732 207 ----------------------MTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLS 262 (733)
Q Consensus 207 ----------------------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls 262 (733)
.++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+..|..+ +++|+.|+++
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 1578888999998888888889999999999999999988877766 7889999999
Q ss_pred cCcCCCCCCccccccccccc
Q 004732 263 YNNFTDGSAESSCQKRSVTG 282 (733)
Q Consensus 263 ~N~l~~~~~~~~~~~~~~~~ 282 (733)
+|.+.+..+........+..
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCE
T ss_pred CCCCCccCHHHhcCCCCCCE
Confidence 99988776655554444433
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=9.4e-28 Score=257.13 Aligned_cols=243 Identities=20% Similarity=0.175 Sum_probs=153.6
Q ss_pred eccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccc
Q 004732 22 RVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNF 101 (733)
Q Consensus 22 l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 101 (733)
.++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+|
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 455666666 4455443 4677777777777755555677777777777777777766666677777777777777777
Q ss_pred cccCCccccCCCCCCEEEeeCCccccCCC-ccccccCCCCEEEccCC-CCccCCCCCCCCcCCcCeeecccccCCCCCcc
Q 004732 102 TGELPKTFAKLTNMKDFRISDNQFTGQIP-SFIQNWTKLEKLFIQPS-GLAGPIPSGIFSLENLTDLRISDLNGPEATFP 179 (733)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 179 (733)
++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|++++| .+....+..+.++++|+.|++++|.+....+.
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 74444446677777777777777773322 36667777777777776 35555556667777777777777777666555
Q ss_pred ccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCC-------------------------------C
Q 004732 180 QLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPS-------------------------------N 227 (733)
Q Consensus 180 ~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-------------------------------~ 227 (733)
.+... +|+.|++++|.++...+..+..+++|+.|++++|.+++..+. .
T Consensus 193 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~ 272 (353)
T 2z80_A 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKL 272 (353)
T ss_dssp TTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHH
T ss_pred HHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHH
Confidence 55554 677777777776533333344566777777777777654333 3
Q ss_pred cCCCCCCCEEEecCCcccccCChhh---hcCCCeeecccCcCCC
Q 004732 228 FDDLYDVDYIYFAGNLLTGAIPPWM---LERGDKIDLSYNNFTD 268 (733)
Q Consensus 228 ~~~l~~L~~L~l~~N~l~~~~p~~~---l~~l~~l~ls~N~l~~ 268 (733)
+..+++|+.|++++|.++ .+|... +++|+.|++++|++.+
T Consensus 273 l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 273 LNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp HHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred HhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccC
Confidence 445566666666666666 344432 4556666666666554
No 295
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.8e-27 Score=267.71 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=67.6
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+.++.|+|++|++++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|+
T Consensus 48 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 127 (570)
T 2z63_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127 (570)
T ss_dssp TTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCC
T ss_pred hhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccccccc
Confidence 34455566666666666666566666666666666666666655555566666666666666665533333455666666
Q ss_pred eeeccCccccc-cCCccccCCCCCCEEEeeCCccc
Q 004732 93 KLHLSSNNFTG-ELPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 93 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
+|+|++|.+++ .+|..|.++++|++|++++|+++
T Consensus 128 ~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred EEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 66666666554 24555666666666666555544
No 296
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=8.5e-27 Score=265.13 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=63.8
Q ss_pred cccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccc-cCCccccCCcCCc
Q 004732 14 KQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSG-ELPEELGSLLNLE 92 (733)
Q Consensus 14 ~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 92 (733)
.+.+.+++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++ ..|..|+++++|+
T Consensus 47 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 47 RACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred hcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 344455555566666655555555556666666666666655544455556666666666665553 2344455555555
Q ss_pred eeeccCccccccCC-ccccCCCCCCEEEeeCCccccCCCccc
Q 004732 93 KLHLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTGQIPSFI 133 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~ 133 (733)
+|+|++|.+.+.+| ..|.++++|++|++++|++++..|..+
T Consensus 127 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred EEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 55555555222332 345555555555555555554444433
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.6e-26 Score=238.21 Aligned_cols=224 Identities=21% Similarity=0.206 Sum_probs=203.6
Q ss_pred CCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeC
Q 004732 43 LQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISD 122 (733)
Q Consensus 43 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 122 (733)
-+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 368999999999 667544 47999999999999987778899999999999999999988899999999999999999
Q ss_pred Cc-cccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCC
Q 004732 123 NQ-FTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGEL 200 (733)
Q Consensus 123 N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~ 200 (733)
|+ ++...+..|..+++|++|+|++|++++..|..+..+++|+.|++++|.+.......+... +|+.|++++|.+++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 98 886668899999999999999999998888999999999999999999998887777655 8999999999999877
Q ss_pred CccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCC
Q 004732 201 PRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 201 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~ 269 (733)
+..|..+++|+.|++++|.+++..|..|..+++|+.|++++|.+.+..+..+ +++|+.|++++|++.+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 7789999999999999999999999999999999999999999997555545 78899999999998764
No 298
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=1.5e-26 Score=270.12 Aligned_cols=247 Identities=18% Similarity=0.183 Sum_probs=180.5
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeec
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 96 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 96 (733)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 34677888888888877778888888888888888888888888888888888888888888544456888888888888
Q ss_pred cCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCC--CcCCcCeeecccccCC
Q 004732 97 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIF--SLENLTDLRISDLNGP 174 (733)
Q Consensus 97 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~--~l~~L~~L~l~~n~~~ 174 (733)
++|++++..|..|+++++|++|+|++|++++..+..++++++|++|++++|++++..+..+. .+++|+.|++++|.+.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 88888876677888888888888888888888788888888888888888888866665443 4577888888888777
Q ss_pred CCCcccccc----------------------------ccccEEEcccCccCCCCCccccCCCC--CcEEEccCCcccCCC
Q 004732 175 EATFPQLGN----------------------------MKMTKLILRNCNITGELPRYLGKMTK--LKVLDLSFNRLRGQI 224 (733)
Q Consensus 175 ~~~~~~~~~----------------------------~~L~~L~l~~n~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~~ 224 (733)
...+..+.. .+|+.|++++|.+++..|..|.+++. |+.|+|++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 655443321 24566666666666666666666543 666666666666666
Q ss_pred CCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeeccc
Q 004732 225 PSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSY 263 (733)
Q Consensus 225 p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~ 263 (733)
|..|..+++|+.|++++|.+.+..|..+ +++++.|++++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTT
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccc
Confidence 6666666666666666666665555443 34444444444
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=9.4e-27 Score=268.08 Aligned_cols=275 Identities=21% Similarity=0.143 Sum_probs=208.7
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+...+.++.+++++|.++ .+| .+..+++|+.|++++|.+ +.+| .+ .+++|++|++++|...+.+ .++.+++|+
T Consensus 281 ~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 353 (606)
T 3vq2_A 281 FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLS 353 (606)
T ss_dssp CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCC
T ss_pred cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCC
Confidence 455667788888888886 455 788888888888888888 4777 45 8888888888888555444 567888888
Q ss_pred eeeccCcccccc--CCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCC-CCCCCcCCcCeeecc
Q 004732 93 KLHLSSNNFTGE--LPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIP-SGIFSLENLTDLRIS 169 (733)
Q Consensus 93 ~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~ 169 (733)
+|+|++|++++. +|..+..+++|++|++++|.+++ +|..|..+++|+.|++++|++.+..| ..+..+++|+.|+++
T Consensus 354 ~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 432 (606)
T 3vq2_A 354 YLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS 432 (606)
T ss_dssp EEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT
T ss_pred EEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc
Confidence 888888888765 37778888888888888888884 66778888888888888888887766 577788888888888
Q ss_pred cccCCCCCccccccc-cccEEEcccCccCC-CCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccccc
Q 004732 170 DLNGPEATFPQLGNM-KMTKLILRNCNITG-ELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGA 247 (733)
Q Consensus 170 ~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 247 (733)
+|.+....+..+... +|+.|++++|.+++ .+|..|+.+++|+.|+|++|++++..|..+..+++|+.|++++|.+++.
T Consensus 433 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 433 YTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 888877766666554 78888888888887 4677788888888888888888888888888888888888888888877
Q ss_pred CChhh--hcCCCeeecccCcCCCCCCccccccc-ccccccccccccccCCce
Q 004732 248 IPPWM--LERGDKIDLSYNNFTDGSAESSCQKR-SVTGIVSCLRSVQCPKTY 296 (733)
Q Consensus 248 ~p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~~-~~~~~~~~~~~~~c~~~~ 296 (733)
.|..+ +++|+.|++++|+++..+.. ..... .+..+....+++.|.+..
T Consensus 513 ~~~~~~~l~~L~~L~l~~N~l~~~p~~-~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 513 DSSHYNQLYSLSTLDCSFNRIETSKGI-LQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EGGGTTTCTTCCEEECTTSCCCCEESC-GGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CHHHccCCCcCCEEECCCCcCcccCHh-HhhhcccCcEEEccCCCcccCCcc
Confidence 77766 67788888888888754433 32222 345555556666665543
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=248.29 Aligned_cols=256 Identities=15% Similarity=0.114 Sum_probs=209.1
Q ss_pred cccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCC
Q 004732 36 KLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNM 115 (733)
Q Consensus 36 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 115 (733)
.-..++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|
T Consensus 26 ~~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (353)
T 2z80_A 26 ASLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102 (353)
T ss_dssp -CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC
Confidence 3344566677899999999 7787665 599999999999997666789999999999999999998888899999999
Q ss_pred CEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCC-CCCCCcCCcCeeeccccc-CCCCCccccccc-cccEEEcc
Q 004732 116 KDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIP-SGIFSLENLTDLRISDLN-GPEATFPQLGNM-KMTKLILR 192 (733)
Q Consensus 116 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~~-~L~~L~l~ 192 (733)
++|+|++|++++..+..|+++++|++|+|++|++++..+ ..+..+++|+.|++++|+ +....+..+... +|+.|+++
T Consensus 103 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 999999999996555569999999999999999995433 478899999999999994 666666666655 89999999
Q ss_pred cCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccC------------------------
Q 004732 193 NCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAI------------------------ 248 (733)
Q Consensus 193 ~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~------------------------ 248 (733)
+|.+++..|..+..+++|++|++++|.++......+..+++|+.|++++|.+.+..
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~ 262 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKIT 262 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997544334556899999999999998643
Q ss_pred -------Chhh--hcCCCeeecccCcCCCCCCcccccccccccccccccccccCC
Q 004732 249 -------PPWM--LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCPK 294 (733)
Q Consensus 249 -------p~~~--l~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 294 (733)
|.++ +++|+.|++++|+++..+.........+..+....+++.|.+
T Consensus 263 ~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 263 DESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 2223 568999999999998665443344455555555556666543
No 301
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=252.03 Aligned_cols=236 Identities=17% Similarity=0.106 Sum_probs=155.2
Q ss_pred cceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceee
Q 004732 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLH 95 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 95 (733)
.+.+++|+|++|++++..|..|..+++|+.|+|++|.+++..+ |..+++|++|+|++|.+++ ++ .+++|+.|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEE
Confidence 3456677777777776666677777777777777777775444 7777777777777777763 22 236777777
Q ss_pred ccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCC-CcCCcCeeecccccCC
Q 004732 96 LSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIF-SLENLTDLRISDLNGP 174 (733)
Q Consensus 96 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~l~~n~~~ 174 (733)
|++|++++..+. .+++|++|++++|++++..+..++.+++|+.|+|++|++++..+..+. .+++|+.|++++|.+.
T Consensus 106 l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 777777754433 256677777777777766666677777777777777777765555553 5677777777777766
Q ss_pred CCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccc-ccCChhh-
Q 004732 175 EATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT-GAIPPWM- 252 (733)
Q Consensus 175 ~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~- 252 (733)
..... ....+|+.|+|++|.+++. |..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++. +.+|.++
T Consensus 183 ~~~~~-~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 183 DVKGQ-VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp EEECC-CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ccccc-cccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 65222 2234677777777777743 444677777777777777777 45666777777777777777776 4444443
Q ss_pred -hcCCCeeecccC
Q 004732 253 -LERGDKIDLSYN 264 (733)
Q Consensus 253 -l~~l~~l~ls~N 264 (733)
+++++.++++++
T Consensus 260 ~~~~L~~l~l~~~ 272 (317)
T 3o53_A 260 KNQRVQTVAKQTV 272 (317)
T ss_dssp TCHHHHHHHHHHH
T ss_pred ccccceEEECCCc
Confidence 445556666633
No 302
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.9e-26 Score=234.32 Aligned_cols=224 Identities=19% Similarity=0.172 Sum_probs=192.8
Q ss_pred eccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccc
Q 004732 22 RVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNF 101 (733)
Q Consensus 22 l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 101 (733)
++-.+.+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344555665 5666554 6799999999999987777899999999999999999977777899999999999999999
Q ss_pred cccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC-CCCCCCCcCCcCeeecccccCCCCCccc
Q 004732 102 TGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP-IPSGIFSLENLTDLRISDLNGPEATFPQ 180 (733)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~L~l~~n~~~~~~~~~ 180 (733)
++..+..|.++++|++|++++|++++..+..++++++|++|++++|++++. +|..+..+++|+.|++++|.+.......
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 988888999999999999999999977777899999999999999999863 6899999999999999999998877666
Q ss_pred cccc-ccc----EEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCC
Q 004732 181 LGNM-KMT----KLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIP 249 (733)
Q Consensus 181 ~~~~-~L~----~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 249 (733)
+... +|+ .|++++|.+++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|++++|++.+..|
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred hhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 6544 455 899999999976665554 4589999999999998777778999999999999999998776
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=7.3e-26 Score=261.83 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=210.5
Q ss_pred eeecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcC
Q 004732 11 HFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLN 90 (733)
Q Consensus 11 ~~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 90 (733)
..|.+.+.++.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++
T Consensus 70 ~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~ 149 (635)
T 4g8a_A 70 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 149 (635)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTT
T ss_pred HHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcc
Confidence 45677888999999999999988889999999999999999999777788999999999999999999766678999999
Q ss_pred CceeeccCccccc-cCCccccCCCCCCEEEeeCCccccCCCcccc-----------------------------------
Q 004732 91 LEKLHLSSNNFTG-ELPKTFAKLTNMKDFRISDNQFTGQIPSFIQ----------------------------------- 134 (733)
Q Consensus 91 L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~----------------------------------- 134 (733)
|++|+|++|.|++ .+|..+..+++|++|+|++|+|++..+..|.
T Consensus 150 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l 229 (635)
T 4g8a_A 150 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKL 229 (635)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred cCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhh
Confidence 9999999999985 4678889999999999999987643221110
Q ss_pred --------------------------------------------------------------------------------
Q 004732 135 -------------------------------------------------------------------------------- 134 (733)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (733)
T Consensus 230 ~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 309 (635)
T 4g8a_A 230 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVS 309 (635)
T ss_dssp EEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCS
T ss_pred hhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccc
Confidence
Q ss_pred -----------------------------------------------------------ccCCCCEEEccCCCCc-----
Q 004732 135 -----------------------------------------------------------NWTKLEKLFIQPSGLA----- 150 (733)
Q Consensus 135 -----------------------------------------------------------~l~~L~~L~l~~N~l~----- 150 (733)
.+++|+.|++++|.+.
T Consensus 310 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~ 389 (635)
T 4g8a_A 310 SFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCC 389 (635)
T ss_dssp EEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEEC
T ss_pred cccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccccc
Confidence 1233444454444432
Q ss_pred ---------------------------------------------------------------------cCCCCCCCCcC
Q 004732 151 ---------------------------------------------------------------------GPIPSGIFSLE 161 (733)
Q Consensus 151 ---------------------------------------------------------------------~~~p~~l~~l~ 161 (733)
+..+..+..++
T Consensus 390 ~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~ 469 (635)
T 4g8a_A 390 SQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 469 (635)
T ss_dssp CHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred ccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccch
Confidence 11222334455
Q ss_pred CcCeeecccccCCC-CCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEe
Q 004732 162 NLTDLRISDLNGPE-ATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYF 239 (733)
Q Consensus 162 ~L~~L~l~~n~~~~-~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 239 (733)
+|+.|++++|.+.. ..+..+... +|+.|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|+.|++
T Consensus 470 ~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 549 (635)
T 4g8a_A 470 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 549 (635)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEEC
T ss_pred hhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEEC
Confidence 66667777665433 334445544 7999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCChhh--h-cCCCeeecccCcCCCCC
Q 004732 240 AGNLLTGAIPPWM--L-ERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 240 ~~N~l~~~~p~~~--l-~~l~~l~ls~N~l~~~~ 270 (733)
++|++++..|..+ + ++|+.|++++|++.|..
T Consensus 550 s~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 550 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp TTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999998888876 3 68999999999998753
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=4e-27 Score=247.59 Aligned_cols=222 Identities=23% Similarity=0.284 Sum_probs=193.0
Q ss_pred eeeecccccccc-ccCCcccc-------CCCCCCeeeccccccccccchhc--cCCCCCCEEEcccccccccCCccccCC
Q 004732 19 NQKRVLKEQNLT-GVLPPKLA-------ELTFLQDISLIANRLKGPIPKYL--ANISTLVNLTVQYNQFSGELPEELGSL 88 (733)
Q Consensus 19 ~~~l~L~~n~l~-~~~p~~l~-------~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l 88 (733)
++.|+|++|+++ ..+|..+. .+++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 778899999994 56777776 79999999999999999999886 8999999999999999976 8888888
Q ss_pred -----cCCceeeccCccccccCCccccCCCCCCEEEeeCCccccC--CCccc--cccCCCCEEEccCCCCcc--CCC-CC
Q 004732 89 -----LNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQ--IPSFI--QNWTKLEKLFIQPSGLAG--PIP-SG 156 (733)
Q Consensus 89 -----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~--~~p-~~ 156 (733)
++|++|+|++|+|++..|..|+++++|++|+|++|++.+. .+..+ ..+++|++|+|++|+|++ .++ ..
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 8999999999999988889999999999999999998865 33444 899999999999999983 223 33
Q ss_pred CCCcCCcCeeecccccCCCCCc-ccccc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCC
Q 004732 157 IFSLENLTDLRISDLNGPEATF-PQLGN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDV 234 (733)
Q Consensus 157 l~~l~~L~~L~l~~n~~~~~~~-~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 234 (733)
+..+++|+.|++++|.+....+ ..+.. .+|+.|+|++|.|+ .+|..+. ++|+.|||++|+|++. |. +..+++|
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L 298 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQV 298 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEE
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCC
Confidence 4578999999999999998763 34443 48999999999999 7787776 8999999999999976 66 9999999
Q ss_pred CEEEecCCcccc
Q 004732 235 DYIYFAGNLLTG 246 (733)
Q Consensus 235 ~~L~l~~N~l~~ 246 (733)
+.|++++|++++
T Consensus 299 ~~L~L~~N~l~~ 310 (312)
T 1wwl_A 299 GNLSLKGNPFLD 310 (312)
T ss_dssp EEEECTTCTTTC
T ss_pred CEEeccCCCCCC
Confidence 999999999975
No 305
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.93 E-value=1e-26 Score=264.43 Aligned_cols=153 Identities=20% Similarity=0.217 Sum_probs=134.2
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 57889999999999999999999999999999999998888999999999999999999997777779999999999999
Q ss_pred Cccccc-cCCccccCCCCCCEEEeeCCccccCCC-ccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccc
Q 004732 98 SNNFTG-ELPKTFAKLTNMKDFRISDNQFTGQIP-SFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISD 170 (733)
Q Consensus 98 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 170 (733)
+|.+++ ..|..+.++++|++|++++|++.+.+| ..|.++++|++|++++|++++..|..+..+++|+.|+++.
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 181 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHL 181 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEEC
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEeccc
Confidence 999996 457789999999999999999554555 6899999999999999999998888887654444444333
No 306
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=257.14 Aligned_cols=250 Identities=14% Similarity=0.149 Sum_probs=221.4
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
..+.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..|.+|+.+++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 46889999999999999999999999999999999998888899999999999999999998888899999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCcccc-CCCccccccCCCCEEEccCCCCccCCCCCCCCcCCc----Ceeeccccc
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTG-QIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENL----TDLRISDLN 172 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L----~~L~l~~n~ 172 (733)
+|++++..+..|+++++|++|++++|++++ .+|..|+++++|++|++++|++++..+..+..+++| ..|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 999996666679999999999999999997 479999999999999999999998888889999888 899999999
Q ss_pred CCCCCccccccccccEEEcccC----------------------------------------------------------
Q 004732 173 GPEATFPQLGNMKMTKLILRNC---------------------------------------------------------- 194 (733)
Q Consensus 173 ~~~~~~~~~~~~~L~~L~l~~n---------------------------------------------------------- 194 (733)
+....+..+...+|+.|++++|
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 9988877777777888887776
Q ss_pred ccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCCC
Q 004732 195 NITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 195 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~~ 270 (733)
.+.+.+|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|...+++++.|++++|.+.+..
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcccccc
Confidence 445566777888899999999999998 588888888 9999999999988 677767888889999888876543
No 307
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=7.2e-27 Score=262.96 Aligned_cols=184 Identities=17% Similarity=0.211 Sum_probs=146.2
Q ss_pred cccCcccCCCcccEEEcccCCCcEEEEEEccccCh--------hcHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004732 396 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK--------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 467 (733)
Q Consensus 396 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 467 (733)
...+.||+|+||.||+|.. .++.+++|+...... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 468889987643311 1134589999999999999999777777788888999
Q ss_pred EEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccC
Q 004732 468 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 547 (733)
Q Consensus 468 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 547 (733)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999854 5689999999999999986 999999999999999 99999999999765532
Q ss_pred ccc------ccccccCCCcccHHHHhh--CCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 548 THI------STRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 548 ~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
... ...+.||+.|+|||++.. ..|+..+|+||..+-..+-+.++.++
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 221 235789999999999987 56888999999999888888777665
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.1e-25 Score=230.17 Aligned_cols=208 Identities=16% Similarity=0.156 Sum_probs=191.7
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 47889999999999888899999999999999999998888899999999999999999998888899999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccC-CCccccccCCCCEEEccCCCCccCCCCCCCCcCCcC----eeeccccc
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQ-IPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLT----DLRISDLN 172 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~----~L~l~~n~ 172 (733)
+|++++..+..+..+++|++|++++|++++. +|..|.++++|+.|+|++|++++..+..+..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 9999977777899999999999999999963 699999999999999999999988778888888887 89999999
Q ss_pred CCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCC
Q 004732 173 GPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIP 225 (733)
Q Consensus 173 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 225 (733)
+.......+...+|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+
T Consensus 189 l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99988888888899999999999998877788999999999999999996543
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=6.1e-26 Score=239.13 Aligned_cols=237 Identities=19% Similarity=0.140 Sum_probs=205.5
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
..+..+++.+++.......+..+++|++|+|++|+|++..|..|.++++|++|+|++|.+++..+ |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45567888899987777777788999999999999998888899999999999999999997655 9999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEAT 177 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~ 177 (733)
+|+|++. + ..++|++|++++|++++..+. .+++|+.|++++|++++..+..+..+++|+.|++++|.+....
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9999943 3 348999999999999976554 3688999999999999888889999999999999999999987
Q ss_pred ccccc--cccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--h
Q 004732 178 FPQLG--NMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--L 253 (733)
Q Consensus 178 ~~~~~--~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l 253 (733)
+..+. ..+|+.|+|++|.+++. + ....+++|+.|+|++|++++. |..+..+++|+.|++++|.++ .+|..+ +
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 77664 34899999999999966 3 344599999999999999964 555999999999999999998 466665 6
Q ss_pred cCCCeeecccCcCCC
Q 004732 254 ERGDKIDLSYNNFTD 268 (733)
Q Consensus 254 ~~l~~l~ls~N~l~~ 268 (733)
++++.|++++|++.+
T Consensus 237 ~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 237 QNLEHFDLRGNGFHC 251 (317)
T ss_dssp TTCCEEECTTCCCBH
T ss_pred CCCCEEEccCCCccC
Confidence 889999999999974
No 310
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.92 E-value=4.7e-25 Score=235.51 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=204.5
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+.+.+.++.|+|++|+++.. +.|..+++|++|+|++|.+++. +. +..+++|++|++++|..... +..+..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSD-LSPLSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCccc-ccchhhCCCCc
Confidence 55677899999999999964 4799999999999999999954 43 99999999999999976634 44599999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccccc
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLN 172 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 172 (733)
+|++++|.+++..+ +..+++|+.|++++|++.+ ++. +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 99999999985444 8899999999999999985 443 8899999999999999985544 8889999999999999
Q ss_pred CCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh
Q 004732 173 GPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM 252 (733)
Q Consensus 173 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 252 (733)
+..... .....+|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|.+.+..|..+
T Consensus 233 l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 233 ITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred cCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 887765 22334899999999999864 5688999999999999999864 458889999999999999988777766
Q ss_pred --hcCCCeeecccCcCCCCCC
Q 004732 253 --LERGDKIDLSYNNFTDGSA 271 (733)
Q Consensus 253 --l~~l~~l~ls~N~l~~~~~ 271 (733)
+++|+.|++++|++++..+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG
T ss_pred hccccCCEEEccCCccccccC
Confidence 6889999999999887655
No 311
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.7e-24 Score=221.04 Aligned_cols=214 Identities=21% Similarity=0.235 Sum_probs=160.2
Q ss_pred eeeecccce-----eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCcc
Q 004732 10 FHFWKQKTV-----NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEE 84 (733)
Q Consensus 10 ~~~~~~~~~-----~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 84 (733)
++.|.+..| .+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|.++...+..
T Consensus 4 ~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~ 80 (270)
T 2o6q_A 4 LCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI 80 (270)
T ss_dssp CBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhh
Confidence 345655333 346778888888 4565554 57888888888888666667888888888888888887544455
Q ss_pred ccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcC
Q 004732 85 LGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLT 164 (733)
Q Consensus 85 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~ 164 (733)
|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+
T Consensus 81 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 160 (270)
T 2o6q_A 81 FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160 (270)
T ss_dssp TSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccc
Confidence 67788888888888888866666677788888888888888876667777778888888888877754444455555555
Q ss_pred eeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcc
Q 004732 165 DLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLL 244 (733)
Q Consensus 165 ~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 244 (733)
.|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++
T Consensus 161 -----------------------~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 161 -----------------------ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp -----------------------EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred -----------------------eeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 555666777766667788899999999999999977777788999999999999999
Q ss_pred cccCC
Q 004732 245 TGAIP 249 (733)
Q Consensus 245 ~~~~p 249 (733)
.+..+
T Consensus 218 ~c~c~ 222 (270)
T 2o6q_A 218 DCTCN 222 (270)
T ss_dssp CCSSS
T ss_pred eCCCc
Confidence 87654
No 312
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=8e-26 Score=252.19 Aligned_cols=232 Identities=21% Similarity=0.171 Sum_probs=197.3
Q ss_pred cccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccc
Q 004732 24 LKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTG 103 (733)
Q Consensus 24 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 103 (733)
+...++...+......+++|+.|+|++|.|++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.|++
T Consensus 17 ~~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~ 94 (487)
T 3oja_A 17 VTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE 94 (487)
T ss_dssp CCTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE
T ss_pred CchhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC
Confidence 44444443333334445599999999999998888999999999999999999997666 9999999999999999995
Q ss_pred cCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccc-
Q 004732 104 ELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLG- 182 (733)
Q Consensus 104 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~- 182 (733)
..+ .++|++|+|++|+|++..+. .+++|+.|+|++|++++..|..++.+++|+.|+|++|.+....+..+.
T Consensus 95 l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 166 (487)
T 3oja_A 95 LLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (487)
T ss_dssp EEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred CCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh
Confidence 433 38999999999999976554 468999999999999998899999999999999999999998777765
Q ss_pred -cccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCee
Q 004732 183 -NMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKI 259 (733)
Q Consensus 183 -~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l 259 (733)
..+|+.|+|++|.+++..+ +..+++|+.|+|++|.|++..| .+..+++|+.|++++|.+++ +|..+ +++++.|
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 167 SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 3489999999999997733 4469999999999999997555 59999999999999999995 66665 6889999
Q ss_pred ecccCcCCCC
Q 004732 260 DLSYNNFTDG 269 (733)
Q Consensus 260 ~ls~N~l~~~ 269 (733)
++++|++.|.
T Consensus 243 ~l~~N~l~c~ 252 (487)
T 3oja_A 243 DLRGNGFHCG 252 (487)
T ss_dssp ECTTCCBCHH
T ss_pred EcCCCCCcCc
Confidence 9999998743
No 313
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.92 E-value=2.4e-24 Score=229.99 Aligned_cols=254 Identities=19% Similarity=0.258 Sum_probs=211.7
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+...+.++.|+|++|++++..+ +..+++|++|+|++|.++. ++ .|.++++|++|+|++|.+++ ++. +..+++|+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~ 135 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMY 135 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCC
T ss_pred hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCcee
Confidence 4556779999999999996543 9999999999999999995 44 69999999999999999994 444 99999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccccc
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLN 172 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 172 (733)
.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++.+. +. +..+++|+.|++++|.
T Consensus 136 ~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 136 SLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp EEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSC
T ss_pred EEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCC
Confidence 99999997664444 49999999999999999995444 88999999999999999854 33 8889999999999999
Q ss_pred CCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCCh-h
Q 004732 173 GPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPP-W 251 (733)
Q Consensus 173 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~ 251 (733)
+..... .....+|+.|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+. +. .
T Consensus 211 l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~ 284 (347)
T 4fmz_A 211 ITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLN 284 (347)
T ss_dssp CCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGG
T ss_pred CCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhc
Confidence 988765 2233489999999999996654 89999999999999999963 5688999999999999999865 33 2
Q ss_pred hhcCCCeeecccCcCCCCCCcccccccccccc
Q 004732 252 MLERGDKIDLSYNNFTDGSAESSCQKRSVTGI 283 (733)
Q Consensus 252 ~l~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~ 283 (733)
.+++++.|++++|++++..+........+..+
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 37899999999999987665544444444433
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.7e-24 Score=223.25 Aligned_cols=205 Identities=20% Similarity=0.172 Sum_probs=124.8
Q ss_pred ccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCC
Q 004732 37 LAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMK 116 (733)
Q Consensus 37 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 116 (733)
+.++++|+.|++++|.|+ .+|..+. ++|+.|+|++|.+++..+..|..+++|+.|+|++|.|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 344555555555555555 3443332 455555555555554444555555555555555555553222 14455555
Q ss_pred EEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCc
Q 004732 117 DFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCN 195 (733)
Q Consensus 117 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~ 195 (733)
+|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|.+.......+... +|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 5555555555 445555555555555555555554444455555555555555555554444444333 56677777888
Q ss_pred cCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccC
Q 004732 196 ITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAI 248 (733)
Q Consensus 196 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 248 (733)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|++++|++.+..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 88666667788999999999999998 67888888889999999999987654
No 315
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3.5e-24 Score=220.27 Aligned_cols=183 Identities=21% Similarity=0.243 Sum_probs=160.2
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.+++|+|++|++++..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 47889999999998888899999999999999999996666678999999999999999997666778999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEAT 177 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~ 177 (733)
+|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~---------- 187 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK---------- 187 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE----------
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE----------
Confidence 9999988888899999999999999999977777799999999999999999976666677776666554
Q ss_pred ccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCC
Q 004732 178 FPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQ 223 (733)
Q Consensus 178 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 223 (733)
|++|.+++..+..|..+++|+.|+|++|.+...
T Consensus 188 -------------L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 188 -------------LDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp -------------CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred -------------CCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 555667666666788899999999999988754
No 316
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=2.6e-24 Score=239.30 Aligned_cols=240 Identities=29% Similarity=0.371 Sum_probs=136.6
Q ss_pred cccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCce
Q 004732 14 KQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEK 93 (733)
Q Consensus 14 ~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 93 (733)
...+.++.|+|++|++++..+ +..+++|++|+|++|.+++..+ ++++++|++|+|++|.+++. +. +..+++|++
T Consensus 65 ~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~ 138 (466)
T 1o6v_A 65 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNR 138 (466)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSE
T ss_pred hhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCE
Confidence 334556666777777665433 6667777777777777764433 66677777777777766633 32 666666777
Q ss_pred eeccCccccccCCc--------------------cccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCC
Q 004732 94 LHLSSNNFTGELPK--------------------TFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPI 153 (733)
Q Consensus 94 L~Ls~N~l~~~~p~--------------------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 153 (733)
|+|++|.+++ ++. .+.++++|++|++++|++++. ..+..+++|+.|++++|++.+..
T Consensus 139 L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~ 215 (466)
T 1o6v_A 139 LELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDIT 215 (466)
T ss_dssp EEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred EECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccc
Confidence 7776666653 221 134445555555555555532 23555566666666666655433
Q ss_pred CCCCCCcCCcCeeecccccCCCCCcccccc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCC
Q 004732 154 PSGIFSLENLTDLRISDLNGPEATFPQLGN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY 232 (733)
Q Consensus 154 p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 232 (733)
| ++.+++|+.|++++|.+.... .+.. .+|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..++
T Consensus 216 ~--~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~ 287 (466)
T 1o6v_A 216 P--LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLT 287 (466)
T ss_dssp G--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred c--ccccCCCCEEECCCCCcccch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCC
Confidence 3 445555666666665555431 2222 256666666666664433 5566666666666666664332 55566
Q ss_pred CCCEEEecCCcccccCChhhhcCCCeeecccCcCCCCC
Q 004732 233 DVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 233 ~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~~ 270 (733)
+|+.|++++|.+.+..|-..+++|+.|++++|++++..
T Consensus 288 ~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 288 ALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp TCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG
T ss_pred ccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCch
Confidence 66666666666655444333555666666666665543
No 317
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=4.4e-24 Score=236.00 Aligned_cols=231 Identities=20% Similarity=0.170 Sum_probs=189.0
Q ss_pred eecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCC
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNL 91 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 91 (733)
.+...+.++.|+|++|++++. | .|..+++|++|+|++|+|++. | ++.+++|++|+|++|.+++ ++ ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcC
Confidence 344567788999999999975 5 789999999999999999964 4 8899999999999999996 44 8899999
Q ss_pred ceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccc
Q 004732 92 EKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDL 171 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n 171 (733)
++|+|++|++++ +| +..+++|++|++++|+|++ ++ ++++++|+.|++++|+..+.+ .+..+++|+.|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 999999999995 55 8899999999999999996 33 888999999999999766566 5788899999999999
Q ss_pred cCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChh
Q 004732 172 NGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPW 251 (733)
Q Consensus 172 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 251 (733)
.+...+. ....+|+.|++++|.+++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|.+++. |..
T Consensus 181 ~l~~l~l--~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~-~~~ 251 (457)
T 3bz5_A 181 KITELDV--SQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL-DVS 251 (457)
T ss_dssp CCCCCCC--TTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-CCT
T ss_pred ccceecc--ccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc-CHH
Confidence 9888652 2234789999999999865 38889999999999999997 55 88889999999999999865 444
Q ss_pred hhcCCCeeecccCcCC
Q 004732 252 MLERGDKIDLSYNNFT 267 (733)
Q Consensus 252 ~l~~l~~l~ls~N~l~ 267 (733)
.+++++.|++++|++.
T Consensus 252 ~l~~L~~L~l~~n~L~ 267 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLL 267 (457)
T ss_dssp TCTTCCEEECTTCCCS
T ss_pred HCCCCCEEeccCCCCC
Confidence 4556666665555544
No 318
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=4.5e-24 Score=237.37 Aligned_cols=241 Identities=27% Similarity=0.377 Sum_probs=186.8
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCC----------
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELP---------- 82 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p---------- 82 (733)
+.+.+.++.|+|++|++++..+ +..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++ ++
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~ 160 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISALSGLTSLQQ 160 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CGGGTTCTTCSE
T ss_pred hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-ChhhccCCcccE
Confidence 4456678888888888886654 8888888888888888885433 8888888888888888774 22
Q ss_pred ----------ccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC
Q 004732 83 ----------EELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP 152 (733)
Q Consensus 83 ----------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 152 (733)
..+.++++|+.|+|++|.+++ ++ .+..+++|+.|++++|++++..+ ++.+++|+.|++++|++++.
T Consensus 161 L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 161 LSFGNQVTDLKPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp EEEEESCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred eecCCcccCchhhccCCCCCEEECcCCcCCC-Ch-hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 126677888999999999884 33 48889999999999999986555 77888999999999988743
Q ss_pred CCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCC
Q 004732 153 IPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY 232 (733)
Q Consensus 153 ~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 232 (733)
..+..+++|+.|++++|.+....+ .....+|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..++
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~ 309 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLK 309 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCT
T ss_pred --hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCC
Confidence 457778888888888888877654 2223378888888888886544 7788888888888888886544 77888
Q ss_pred CCCEEEecCCcccccCChhhhcCCCeeecccCcCCCC
Q 004732 233 DVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDG 269 (733)
Q Consensus 233 ~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~ 269 (733)
+|+.|++++|.+.+..|...+++|+.|++++|++++.
T Consensus 310 ~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 310 NLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp TCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 8888888888888776655577888888888888765
No 319
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1e-24 Score=224.43 Aligned_cols=221 Identities=23% Similarity=0.262 Sum_probs=154.6
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
..+.+..+.+... ..+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++|
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTS
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCC
Confidence 3455666666654 34567788888888888877 333 47778888888888888874 3 46778888888888888
Q ss_pred cccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCcc
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFP 179 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 179 (733)
.+++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|++
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l----------- 164 (272)
T 3rfs_A 96 QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL----------- 164 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC-----------
T ss_pred ccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC-----------
Confidence 888666666778888888888888888766667778888888888888887655555666666665555
Q ss_pred ccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCee
Q 004732 180 QLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKI 259 (733)
Q Consensus 180 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l 259 (733)
++|.+++..+..|+.+++|+.|++++|++++..+..+..+++|+.|++++|++.|.+| .++.+
T Consensus 165 ------------~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l 227 (272)
T 3rfs_A 165 ------------SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYL 227 (272)
T ss_dssp ------------CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHH
T ss_pred ------------CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHH
Confidence 4555555555556667777777777777776666666777777777777777766555 35556
Q ss_pred ecccCcCCCCCCccc
Q 004732 260 DLSYNNFTDGSAESS 274 (733)
Q Consensus 260 ~ls~N~l~~~~~~~~ 274 (733)
++..|.++|..+...
T Consensus 228 ~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 228 SEWINKHSGVVRNSA 242 (272)
T ss_dssp HHHHHHTGGGBBCTT
T ss_pred HHHHHhCCCcccCcc
Confidence 666666665544433
No 320
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.91 E-value=5.3e-24 Score=235.38 Aligned_cols=234 Identities=18% Similarity=0.137 Sum_probs=198.3
Q ss_pred ecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCc
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLE 92 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 92 (733)
+...+.++.|+|++|++++. | +..+++|++|+|++|+|++. + ++++++|++|+|++|++++ +| ++.+++|+
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~ 130 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLT 130 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCC
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCC
Confidence 45567789999999999985 3 89999999999999999964 4 9999999999999999996 55 89999999
Q ss_pred eeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccccc
Q 004732 93 KLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLN 172 (733)
Q Consensus 93 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 172 (733)
+|+|++|+|++ ++ ++.+++|++|++++|+..+.+ .++.+++|+.|++++|++++ +| +..+++|+.|++++|.
T Consensus 131 ~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 131 YLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp EEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSC
T ss_pred EEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCc
Confidence 99999999996 44 889999999999999766666 48899999999999999996 55 8889999999999999
Q ss_pred CCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCC-------CCCEEEecCCccc
Q 004732 173 GPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY-------DVDYIYFAGNLLT 245 (733)
Q Consensus 173 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-------~L~~L~l~~N~l~ 245 (733)
+..... ....+|+.|++++|++++ +| ++.+++|+.|++++|++++..+..+..+. +|+.|++++|.+.
T Consensus 203 l~~~~l--~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~ 277 (457)
T 3bz5_A 203 ITKLDL--NQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQL 277 (457)
T ss_dssp CSCCCC--TTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTC
T ss_pred CCeecc--ccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccC
Confidence 988742 223489999999999997 55 88999999999999999987666665554 5667777777777
Q ss_pred ccCChhhhcCCCeeecccCcCCC
Q 004732 246 GAIPPWMLERGDKIDLSYNNFTD 268 (733)
Q Consensus 246 ~~~p~~~l~~l~~l~ls~N~l~~ 268 (733)
+.+|...+++|+.|++++|...+
T Consensus 278 ~~~~~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 278 IYFQAEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CEEECTTCTTCCCCCCTTCTTCC
T ss_pred CcccccccccCCEEECCCCcccc
Confidence 77776557888888888887554
No 321
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.2e-24 Score=223.94 Aligned_cols=203 Identities=19% Similarity=0.218 Sum_probs=165.5
Q ss_pred CCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 40 LTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 40 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
+.++..+++..+.+.... .+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEE
Confidence 355667778888777543 3677888999999999887 343 58888999999999999885 3 4688888999999
Q ss_pred eeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCC
Q 004732 120 ISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGE 199 (733)
Q Consensus 120 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 199 (733)
|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+. |++++|.+++.
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~-----------------------L~L~~n~l~~~ 148 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY-----------------------LNLAHNQLQSL 148 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE-----------------------EECCSSCCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE-----------------------EECCCCccCcc
Confidence 9999998777777888888988888888888666666666666654 55566777777
Q ss_pred CCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCcCCCCCC
Q 004732 200 LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSA 271 (733)
Q Consensus 200 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~ 271 (733)
.+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+..|..+ +++|+.|++++|++.|..+
T Consensus 149 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 149 PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 77778999999999999999998888889999999999999999998777655 7899999999999987543
No 322
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=4.1e-24 Score=215.52 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=175.9
Q ss_pred eeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEccccc-ccccCCccccCCcCCceeeccC-
Q 004732 21 KRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQ-FSGELPEELGSLLNLEKLHLSS- 98 (733)
Q Consensus 21 ~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~- 98 (733)
.+.+..++++ .+|. +. ++|+.|+|++|+|++..+..|.++++|++|+|++|+ ++...+..|..+++|++|+|++
T Consensus 15 ~~~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~ 90 (239)
T 2xwt_C 15 DFRVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90 (239)
T ss_dssp TTEEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEE
T ss_pred cceeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCC
Confidence 3444444555 5666 44 489999999999998777789999999999999997 8866667899999999999998
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCC---EEEccCC-CCccCCCCCCCCcCCcC-eeecccccC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLE---KLFIQPS-GLAGPIPSGIFSLENLT-DLRISDLNG 173 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~~ 173 (733)
|+|++..+..|.++++|++|++++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ .|++++|.+
T Consensus 91 n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 91 RNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 99997777889999999999999999995 776 88899998 9999999 99977777899999999 999999888
Q ss_pred CCCCccccccccccEEEcccCc-cCCCCCccccCC-CCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCC
Q 004732 174 PEATFPQLGNMKMTKLILRNCN-ITGELPRYLGKM-TKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGN 242 (733)
Q Consensus 174 ~~~~~~~~~~~~L~~L~l~~n~-l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 242 (733)
.......+...+|+.|++++|. +++..+..|.++ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 169 ~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred cccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 8766666666678888888884 886667778888 888888888888884 4433 5667777777765
No 323
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.9e-23 Score=216.77 Aligned_cols=205 Identities=20% Similarity=0.180 Sum_probs=183.8
Q ss_pred eeecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcC
Q 004732 11 HFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLN 90 (733)
Q Consensus 11 ~~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 90 (733)
+...+.+..+++++++|+++ .+|..+. ++|+.|+|++|.|++..+..|.++++|++|+|++|.+++..+ .+.+++
T Consensus 4 C~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 78 (290)
T 1p9a_G 4 CEVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPV 78 (290)
T ss_dssp SEEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTT
T ss_pred ccccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCc
Confidence 44556667889999999999 5666664 789999999999998888999999999999999999995433 388999
Q ss_pred CceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccc
Q 004732 91 LEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISD 170 (733)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 170 (733)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 999999999999 8898999999999999999999987788999999999999999999977777888999999999999
Q ss_pred ccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC
Q 004732 171 LNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG 222 (733)
Q Consensus 171 n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 222 (733)
|.+.......+... +|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+..
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99998888777654 8999999999999 778888889999999999999873
No 324
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.1e-23 Score=211.99 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=113.7
Q ss_pred ecccce---eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCc
Q 004732 13 WKQKTV---NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLL 89 (733)
Q Consensus 13 ~~~~~~---~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 89 (733)
|.+++| .+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|..++
T Consensus 7 ~~gC~C~~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 83 (251)
T 3m19_A 7 VTGCTCNEGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLT 83 (251)
T ss_dssp HHSSEEEGGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT
T ss_pred CCceEcCCCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCC
Confidence 444444 234555555555 3444333 4555555555555555555555555555555555555544444455555
Q ss_pred CCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecc
Q 004732 90 NLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRIS 169 (733)
Q Consensus 90 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 169 (733)
+|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 84 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------------------------- 138 (251)
T 3m19_A 84 ELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL------------------------- 138 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC-------------------------
T ss_pred cCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC-------------------------
Confidence 5555555555555444444445555555555555554333333344444443333
Q ss_pred cccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCC
Q 004732 170 DLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIP 249 (733)
Q Consensus 170 ~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 249 (733)
++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+...
T Consensus 139 ----------------------s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 139 ----------------------NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp ----------------------CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred ----------------------cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 4444444445566777778888888888887666777788888888888888876632
Q ss_pred ------hhhhcC-CCeeecccCcCCCCCCcccccc
Q 004732 250 ------PWMLER-GDKIDLSYNNFTDGSAESSCQK 277 (733)
Q Consensus 250 ------~~~l~~-l~~l~ls~N~l~~~~~~~~~~~ 277 (733)
.|+..+ .+..+..++.+.+.+....|..
T Consensus 197 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 231 (251)
T 3m19_A 197 EILYLSQWIRENSNKVKDGTGQNLHESPDGVTCSD 231 (251)
T ss_dssp THHHHHHHHHHSGGGBCC-------CCGGGCBBTT
T ss_pred ccHHHHHHHHhcccceeeccCcccccCCCcCccCC
Confidence 233222 2334555666655555555543
No 325
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=2.5e-23 Score=229.83 Aligned_cols=228 Identities=18% Similarity=0.180 Sum_probs=154.9
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCC-------------CEEEcccccccccCCc
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTL-------------VNLTVQYNQFSGELPE 83 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L-------------~~L~L~~N~l~~~~p~ 83 (733)
+.++++++++|++ +.+|+.|+++++|++|++++|.++|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5678899999999 7999999999999999999999999999999988764 999999999984 554
Q ss_pred cccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCc
Q 004732 84 ELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENL 163 (733)
Q Consensus 84 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L 163 (733)
. .++|+.|+|++|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .++++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 3688999999999985 6653 3678888888888884 3332 2688888888888885 66 58888888
Q ss_pred CeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCc
Q 004732 164 TDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNL 243 (733)
Q Consensus 164 ~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 243 (733)
+.|++++|.+...+. .. .+|+.|++++|.+++ +| .++++++|+.|++++|++++ +|... ++|+.|++++|.
T Consensus 156 ~~L~l~~N~l~~lp~-~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~ 226 (454)
T 1jl5_A 156 KIIDVDNNSLKKLPD-LP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNI 226 (454)
T ss_dssp CEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSC
T ss_pred CEEECCCCcCcccCC-Cc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCc
Confidence 888888888776432 11 378888888888886 45 57888888888888888875 44432 477778888887
Q ss_pred ccccCChhh-hcCCCeeecccCcCCCC
Q 004732 244 LTGAIPPWM-LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 244 l~~~~p~~~-l~~l~~l~ls~N~l~~~ 269 (733)
+. .+|... +++++.|++++|++++.
T Consensus 227 l~-~lp~~~~l~~L~~L~l~~N~l~~l 252 (454)
T 1jl5_A 227 LE-ELPELQNLPFLTTIYADNNLLKTL 252 (454)
T ss_dssp CS-SCCCCTTCTTCCEEECCSSCCSSC
T ss_pred CC-cccccCCCCCCCEEECCCCcCCcc
Confidence 77 555422 66777777777777653
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.8e-23 Score=218.10 Aligned_cols=226 Identities=16% Similarity=0.162 Sum_probs=186.2
Q ss_pred CCCCeeeccccccccccch---hccCCCCCCEEEcccccccccCCccc--cCCcCCceeeccCccccccCC----ccccC
Q 004732 41 TFLQDISLIANRLKGPIPK---YLANISTLVNLTVQYNQFSGELPEEL--GSLLNLEKLHLSSNNFTGELP----KTFAK 111 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~---~l~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 111 (733)
..++.|.+.++.++..... .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4478888888887642111 23345789999999999999999988 999999999999999997655 44567
Q ss_pred CCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC--C--CCCCCCcCCcCeeecccccCCCCCcc---cccc-
Q 004732 112 LTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP--I--PSGIFSLENLTDLRISDLNGPEATFP---QLGN- 183 (733)
Q Consensus 112 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~--p~~l~~l~~L~~L~l~~n~~~~~~~~---~~~~- 183 (733)
+++|++|+|++|++++..+..|+++++|++|+|++|++.+. + +..+..+++|+.|++++|.+...... .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988889999999999999999998753 2 33457899999999999999754332 2233
Q ss_pred ccccEEEcccCccCCCCCccccCC---CCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeee
Q 004732 184 MKMTKLILRNCNITGELPRYLGKM---TKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKID 260 (733)
Q Consensus 184 ~~L~~L~l~~n~l~~~~p~~~~~l---~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ 260 (733)
.+|+.|+|++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|++++|.+++......+++++.|+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~ 300 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLT 300 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEE
Confidence 489999999999999888888877 69999999999999 6787764 79999999999999742233478999999
Q ss_pred cccCcCCCC
Q 004732 261 LSYNNFTDG 269 (733)
Q Consensus 261 ls~N~l~~~ 269 (733)
+++|++++.
T Consensus 301 L~~N~l~~~ 309 (310)
T 4glp_A 301 LDGNPFLVP 309 (310)
T ss_dssp CSSTTTSCC
T ss_pred CcCCCCCCC
Confidence 999998753
No 327
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1e-24 Score=231.69 Aligned_cols=263 Identities=14% Similarity=0.165 Sum_probs=212.7
Q ss_pred eeeeecccce----eeeeccccccccccCCccccCC--CCCCeeeccccccccccchhccCCCCCCEEEccccccccc-C
Q 004732 9 VFHFWKQKTV----NQKRVLKEQNLTGVLPPKLAEL--TFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGE-L 81 (733)
Q Consensus 9 ~~~~~~~~~~----~~~l~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~ 81 (733)
+...|....+ .+.+++++|++. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +
T Consensus 35 vc~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHH
Confidence 4445655432 567899998887 5667777 8999999999999977665 67899999999999999866 8
Q ss_pred CccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCC-ccccC-CCccccccCCCCEEEccCC-CCccC-CCCCC
Q 004732 82 PEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDN-QFTGQ-IPSFIQNWTKLEKLFIQPS-GLAGP-IPSGI 157 (733)
Q Consensus 82 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~-~p~~l 157 (733)
+..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 888999999999999999999889999999999999999999 68763 6777899999999999999 99864 56778
Q ss_pred CCcC-CcCeeecccc--cCCCCC-ccccc-cccccEEEcccCc-cCCCCCccccCCCCCcEEEccCCc-ccCCCCCCcCC
Q 004732 158 FSLE-NLTDLRISDL--NGPEAT-FPQLG-NMKMTKLILRNCN-ITGELPRYLGKMTKLKVLDLSFNR-LRGQIPSNFDD 230 (733)
Q Consensus 158 ~~l~-~L~~L~l~~n--~~~~~~-~~~~~-~~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~ 230 (733)
..++ +|+.|++++| .+.... +..+. ..+|+.|++++|. +++..+..+..+++|+.|++++|. +.......+..
T Consensus 191 ~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~ 270 (336)
T 2ast_B 191 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGE 270 (336)
T ss_dssp HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGG
T ss_pred HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhc
Confidence 8899 9999999999 454222 22333 3389999999999 787888899999999999999995 33222236888
Q ss_pred CCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCCCCccccc
Q 004732 231 LYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDGSAESSCQ 276 (733)
Q Consensus 231 l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~~~~~~~~ 276 (733)
+++|+.|++++| ++...-..+...+..|++++|++++..+.....
T Consensus 271 ~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 271 IPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 999999999999 443322333456889999999999877655543
No 328
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=9.9e-25 Score=234.35 Aligned_cols=248 Identities=15% Similarity=0.135 Sum_probs=200.5
Q ss_pred eccccccccccCCccccCCCCCCeeeccccccccccc----hhccCCC-CCCEEEcccccccccCCccccCC-----cCC
Q 004732 22 RVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIP----KYLANIS-TLVNLTVQYNQFSGELPEELGSL-----LNL 91 (733)
Q Consensus 22 l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 91 (733)
..|++|++++.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4688999999999888877889999999999997777 7888998 99999999999998778777776 999
Q ss_pred ceeeccCccccccCCccccC----C-CCCCEEEeeCCccccCCCccccc-----cCCCCEEEccCCCCccCCC----CCC
Q 004732 92 EKLHLSSNNFTGELPKTFAK----L-TNMKDFRISDNQFTGQIPSFIQN-----WTKLEKLFIQPSGLAGPIP----SGI 157 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~p----~~l 157 (733)
++|+|++|.+++..+..++. + ++|++|+|++|+|++..+..+.. .++|++|+|++|++++..+ ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 99999999999777765444 4 89999999999999776655543 3699999999999996443 334
Q ss_pred CCcC-CcCeeecccccCCCCCccccc-----c-ccccEEEcccCccCCC----CCccccC-CCCCcEEEccCCcccCCCC
Q 004732 158 FSLE-NLTDLRISDLNGPEATFPQLG-----N-MKMTKLILRNCNITGE----LPRYLGK-MTKLKVLDLSFNRLRGQIP 225 (733)
Q Consensus 158 ~~l~-~L~~L~l~~n~~~~~~~~~~~-----~-~~L~~L~l~~n~l~~~----~p~~~~~-l~~L~~L~ls~N~l~~~~p 225 (733)
..++ +|+.|+|++|.+.......+. . .+|+.|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4555 999999999999887765433 2 3899999999999964 4455655 4599999999999997655
Q ss_pred ----CCcCCCCCCCEEEecCCcccccCChhh---------hcCCCeeecccCcCCCC
Q 004732 226 ----SNFDDLYDVDYIYFAGNLLTGAIPPWM---------LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 226 ----~~~~~l~~L~~L~l~~N~l~~~~p~~~---------l~~l~~l~ls~N~l~~~ 269 (733)
..+..+++|+.|++++|.+.+..+... +++++.||+++|++.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 345778999999999999664433322 45678899999998654
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=218.21 Aligned_cols=221 Identities=18% Similarity=0.229 Sum_probs=163.8
Q ss_pred eeeccccccccccCC---ccccCCCCCCeeeccccccccccchhc--cCCCCCCEEEcccccccccCC----ccccCCcC
Q 004732 20 QKRVLKEQNLTGVLP---PKLAELTFLQDISLIANRLKGPIPKYL--ANISTLVNLTVQYNQFSGELP----EELGSLLN 90 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p---~~l~~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~ 90 (733)
+.+.+.++.++...- ..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++
T Consensus 67 ~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~ 146 (310)
T 4glp_A 67 RRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPG 146 (310)
T ss_dssp CEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSC
T ss_pred eEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccC
Confidence 445555555543111 112234668888888888888888777 788888888888888886555 34567888
Q ss_pred CceeeccCccccccCCccccCCCCCCEEEeeCCccccC--C--CccccccCCCCEEEccCCCCccCCCC----CCCCcCC
Q 004732 91 LEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQ--I--PSFIQNWTKLEKLFIQPSGLAGPIPS----GIFSLEN 162 (733)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~ 162 (733)
|++|+|++|++++..|..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+++
T Consensus 147 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 147 LKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQ 225 (310)
T ss_dssp CCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCC
T ss_pred CCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCC
Confidence 88888888888877778888888888888888887642 1 233467888888888888886 2222 2456788
Q ss_pred cCeeecccccCCCCCcccccc----ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEE
Q 004732 163 LTDLRISDLNGPEATFPQLGN----MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIY 238 (733)
Q Consensus 163 L~~L~l~~n~~~~~~~~~~~~----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 238 (733)
|+.|+|++|.+....+..+.. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLT 300 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEE
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEE
Confidence 888888888888775544443 37889999999999 6677664 7999999999999964 44 67889999999
Q ss_pred ecCCcccc
Q 004732 239 FAGNLLTG 246 (733)
Q Consensus 239 l~~N~l~~ 246 (733)
+++|+++.
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 99999864
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=7e-23 Score=206.47 Aligned_cols=211 Identities=18% Similarity=0.190 Sum_probs=178.8
Q ss_pred eeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCcc-ccccCCccccCCCCCCEEEeeC-C
Q 004732 46 ISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNN-FTGELPKTFAKLTNMKDFRISD-N 123 (733)
Q Consensus 46 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~-N 123 (733)
+++..+.++ .+|. +. ++|++|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |
T Consensus 16 ~~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n 91 (239)
T 2xwt_C 16 FRVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTR 91 (239)
T ss_dssp TEEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEET
T ss_pred ceeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCC
Confidence 333333466 5666 43 489999999999997777789999999999999997 9866777899999999999999 9
Q ss_pred ccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcC---eeecccc-cCCCCCccccccc-ccc-EEEcccCccC
Q 004732 124 QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLT---DLRISDL-NGPEATFPQLGNM-KMT-KLILRNCNIT 197 (733)
Q Consensus 124 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~---~L~l~~n-~~~~~~~~~~~~~-~L~-~L~l~~n~l~ 197 (733)
++++..+..|.++++|+.|++++|++++ +|. +..+++|+ .|++++| .+.......+... +|+ .|++++|.++
T Consensus 92 ~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 92 NLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp TCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 9997777899999999999999999996 776 88888888 9999999 8888877767665 899 9999999999
Q ss_pred CCCCccccCCCCCcEEEccCCc-ccCCCCCCcCCC-CCCCEEEecCCcccccCChhhhcCCCeeecccC
Q 004732 198 GELPRYLGKMTKLKVLDLSFNR-LRGQIPSNFDDL-YDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYN 264 (733)
Q Consensus 198 ~~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N 264 (733)
...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|.++ .+|...+++++.|+++++
T Consensus 170 ~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 170 SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCTTCTTCSEEECTTC
T ss_pred ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChhHhccCceeeccCc
Confidence 444444554 899999999995 997778889999 99999999999998 566667788999988765
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.1e-22 Score=204.62 Aligned_cols=154 Identities=21% Similarity=0.242 Sum_probs=135.0
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeec
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 96 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 96 (733)
..++.|+|++|++++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 34788999999999999999999999999999999999888888999999999999999999777788999999999999
Q ss_pred cCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccc
Q 004732 97 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISD 170 (733)
Q Consensus 97 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 170 (733)
++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 188 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 99999977777789999999999999999977777889999999999999888865555666555555544443
No 332
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.6e-23 Score=215.97 Aligned_cols=151 Identities=19% Similarity=0.100 Sum_probs=121.9
Q ss_pred HHhhhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccCh------------------hcHHHHHHHHHHHHhCCCC
Q 004732 388 IKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK------------------QGNREFINEIGMISALQHP 449 (733)
Q Consensus 388 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~ 449 (733)
+......|...+.||+|+||.||+|+..+|+.||||.+..... .....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3344556777799999999999999997799999999864321 12456899999999999
Q ss_pred ceeeEeeEEEeCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCC
Q 004732 450 NLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD 529 (733)
Q Consensus 450 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 529 (733)
| +++.+++.. +..++||||+++|+|.+ +. ......++.|+++||+|||+.| |+||||||+|||++ +
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~-------~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-E 228 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-T
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cc-------hhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-C
Confidence 5 677776544 45699999999999987 31 1335579999999999999986 99999999999999 9
Q ss_pred CCeEEcccCccccCcccCcccccccccCCCcccHHHHhh
Q 004732 530 LNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR 568 (733)
Q Consensus 530 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 568 (733)
+.+||+|||+|+. +..|+|||++.+
T Consensus 229 ~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 229 EGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp TEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred CcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 9999999999863 345789998853
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.3e-24 Score=235.74 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=201.4
Q ss_pred eccccccccc----cCCccccCCCCCCeeeccccccccccc----hhccCCCCCCEEEcccc---cccccCCccc-----
Q 004732 22 RVLKEQNLTG----VLPPKLAELTFLQDISLIANRLKGPIP----KYLANISTLVNLTVQYN---QFSGELPEEL----- 85 (733)
Q Consensus 22 l~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~N---~l~~~~p~~~----- 85 (733)
..|..++++. .++..+..+++|+.|+|++|.|++..+ ..|..+++|++|+|++| .+++.+|..+
T Consensus 9 ~~L~~~~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~ 88 (386)
T 2ca6_A 9 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQ 88 (386)
T ss_dssp CCCEESSCCSHHHHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHH
Confidence 3444554442 577788899999999999999997644 44778999999999995 5556667655
Q ss_pred --cCCcCCceeeccCccccc----cCCccccCCCCCCEEEeeCCccccCCCcccc----cc---------CCCCEEEccC
Q 004732 86 --GSLLNLEKLHLSSNNFTG----ELPKTFAKLTNMKDFRISDNQFTGQIPSFIQ----NW---------TKLEKLFIQP 146 (733)
Q Consensus 86 --~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~----~l---------~~L~~L~l~~ 146 (733)
..+++|++|+|++|.|++ .+|..+..+++|++|+|++|+|++..+..+. .+ ++|++|+|++
T Consensus 89 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 89 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 789999999999999997 4788899999999999999999854444443 44 9999999999
Q ss_pred CCCc-cCCC---CCCCCcCCcCeeecccccCCCC-----Ccccccc-ccccEEEcccCccC----CCCCccccCCCCCcE
Q 004732 147 SGLA-GPIP---SGIFSLENLTDLRISDLNGPEA-----TFPQLGN-MKMTKLILRNCNIT----GELPRYLGKMTKLKV 212 (733)
Q Consensus 147 N~l~-~~~p---~~l~~l~~L~~L~l~~n~~~~~-----~~~~~~~-~~L~~L~l~~n~l~----~~~p~~~~~l~~L~~ 212 (733)
|+++ +.++ ..+..+++|+.|++++|.+... .+..+.. .+|+.|+|++|.++ +.+|..+..+++|+.
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 9997 3444 4677889999999999988743 2213333 48999999999996 678888999999999
Q ss_pred EEccCCcccCC----CCCCc--CCCCCCCEEEecCCcccc----cCChhh---hcCCCeeecccCcCCCCC
Q 004732 213 LDLSFNRLRGQ----IPSNF--DDLYDVDYIYFAGNLLTG----AIPPWM---LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 213 L~ls~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~p~~~---l~~l~~l~ls~N~l~~~~ 270 (733)
|+|++|.+++. ++..+ ..+++|+.|++++|.+++ .+|..+ +++|+.|++++|++++..
T Consensus 249 L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred EECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 99999999876 45666 348999999999999997 477776 588999999999998654
No 334
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.88 E-value=7.4e-22 Score=218.00 Aligned_cols=206 Identities=23% Similarity=0.329 Sum_probs=111.5
Q ss_pred CCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEe
Q 004732 41 TFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRI 120 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 120 (733)
++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .+.++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 466667777776664 55 46666667777777666663 45432 366666666666664 44 4666666666666
Q ss_pred eCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCC
Q 004732 121 SDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGEL 200 (733)
Q Consensus 121 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 200 (733)
++|++++ +|... ++|+.|++++|+++ .+| .++.+++|+.|++++|.+...+.. ..+|+.|++++|.+++ +
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-C
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-c
Confidence 6666663 33322 35666666666665 445 255566666666666655543211 1244455555555543 2
Q ss_pred CccccCCCCCcEEEccCCcccC--CCCCCcC-------------CC-CCCCEEEecCCcccccCChhhhcCCCeeecccC
Q 004732 201 PRYLGKMTKLKVLDLSFNRLRG--QIPSNFD-------------DL-YDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYN 264 (733)
Q Consensus 201 p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~-------------~l-~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N 264 (733)
|.. +++|+.|++++|++++ .+|..+. .+ ++|+.|++++|.+.+ +|.. +++++.|++++|
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~-~~~L~~L~L~~N 347 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL-PPRLERLIASFN 347 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSS
T ss_pred Ccc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc-CCcCCEEECCCC
Confidence 221 1344444444444443 1221111 12 356666666666664 4433 356666777766
Q ss_pred cCCCC
Q 004732 265 NFTDG 269 (733)
Q Consensus 265 ~l~~~ 269 (733)
.++..
T Consensus 348 ~l~~l 352 (454)
T 1jl5_A 348 HLAEV 352 (454)
T ss_dssp CCSCC
T ss_pred ccccc
Confidence 66643
No 335
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.4e-22 Score=212.40 Aligned_cols=208 Identities=21% Similarity=0.328 Sum_probs=168.1
Q ss_pred eeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCcc
Q 004732 21 KRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNN 100 (733)
Q Consensus 21 ~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 100 (733)
.+.+..++++..+ .+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCc
Confidence 3456677777653 3557899999999999998 455 68999999999999999995 444 9999999999999999
Q ss_pred ccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccc
Q 004732 101 FTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQ 180 (733)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~ 180 (733)
+++ ++ .+..+++|++|+|++|++++ ++. +..+++|+.|++++|++++..+ +..+++|+.|++++|.+.....
T Consensus 97 l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 97 LKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp CSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred CCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 984 44 68899999999999999995 443 8899999999999999985433 8888999999999888877554
Q ss_pred ccc-ccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccc
Q 004732 181 LGN-MKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTG 246 (733)
Q Consensus 181 ~~~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 246 (733)
+.. .+|+.|++++|.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 169 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 443 378888888888886543 788888888888888888654 37888888888888888864
No 336
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=9.3e-22 Score=224.00 Aligned_cols=216 Identities=27% Similarity=0.313 Sum_probs=125.9
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.+.+++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 456778888887 6666665 67888888888877 4554 4677888888888777 4555 567777777777
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCC---CCC--------------cC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSG---IFS--------------LE 161 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~--------------l~ 161 (733)
|+|+ .+|. .+++|+.|++++|+|++ +|.. +++|++|+|++|++++ +|.. +.. ++
T Consensus 111 N~l~-~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~ 181 (622)
T 3g06_A 111 NPLT-HLPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPS 181 (622)
T ss_dssp CCCC-CCCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CcCC-CCCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCC
Confidence 7777 3443 45566666666666663 4432 3566666666666653 2221 111 25
Q ss_pred CcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecC
Q 004732 162 NLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAG 241 (733)
Q Consensus 162 ~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 241 (733)
+|+.|++++|.+...+.. ..+|+.|++++|.++ .+|. .+++|+.|+|++|+|++ +| ..+++|+.|++++
T Consensus 182 ~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 182 GLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSG 250 (622)
T ss_dssp TCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCS
T ss_pred CCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCC
Confidence 666666666666553321 124445555555554 2222 12456666666666653 33 2345556666666
Q ss_pred CcccccCChhhhcCCCeeecccCcCC
Q 004732 242 NLLTGAIPPWMLERGDKIDLSYNNFT 267 (733)
Q Consensus 242 N~l~~~~p~~~l~~l~~l~ls~N~l~ 267 (733)
|.++ .+|. .+++|+.|++++|+++
T Consensus 251 N~L~-~lp~-~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 251 NRLT-SLPM-LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp SCCS-CCCC-CCTTCCEEECCSSCCC
T ss_pred CCCC-cCCc-ccccCcEEeCCCCCCC
Confidence 6555 3333 4455556666666555
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.8e-24 Score=234.54 Aligned_cols=250 Identities=17% Similarity=0.221 Sum_probs=199.9
Q ss_pred cccceeeeeccccccccccCC----ccccCCCCCCeeecccc---ccccccchhc-------cCCCCCCEEEcccccccc
Q 004732 14 KQKTVNQKRVLKEQNLTGVLP----PKLAELTFLQDISLIAN---RLKGPIPKYL-------ANISTLVNLTVQYNQFSG 79 (733)
Q Consensus 14 ~~~~~~~~l~L~~n~l~~~~p----~~l~~l~~L~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~L~~N~l~~ 79 (733)
...+.++.|+|++|+++...+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 29 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 29 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 345668999999999998644 45778999999999996 5556666555 789999999999999997
Q ss_pred ----cCCccccCCcCCceeeccCccccccCCcccc----CC---------CCCCEEEeeCCccc-cCCC---ccccccCC
Q 004732 80 ----ELPEELGSLLNLEKLHLSSNNFTGELPKTFA----KL---------TNMKDFRISDNQFT-GQIP---SFIQNWTK 138 (733)
Q Consensus 80 ----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~l~~N~l~-~~~~---~~~~~l~~ 138 (733)
.+|..+..+++|++|+|++|.|++..+..+. .+ ++|++|+|++|+++ +.++ ..+..+++
T Consensus 109 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 188 (386)
T 2ca6_A 109 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 188 (386)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCC
Confidence 4788899999999999999999865544444 34 99999999999998 4455 46778999
Q ss_pred CCEEEccCCCCcc-----CCCCCCCCcCCcCeeecccccCCC----CCcccccc-ccccEEEcccCccCCC----CCccc
Q 004732 139 LEKLFIQPSGLAG-----PIPSGIFSLENLTDLRISDLNGPE----ATFPQLGN-MKMTKLILRNCNITGE----LPRYL 204 (733)
Q Consensus 139 L~~L~l~~N~l~~-----~~p~~l~~l~~L~~L~l~~n~~~~----~~~~~~~~-~~L~~L~l~~n~l~~~----~p~~~ 204 (733)
|+.|+|++|+++. ..+..+..+++|+.|+|++|.+.. ..+..+.. .+|+.|+|++|.+++. ++..+
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l 268 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAF 268 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHH
T ss_pred cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHH
Confidence 9999999999983 345588899999999999999852 22333333 4899999999999876 56666
Q ss_pred c--CCCCCcEEEccCCcccC----CCCCCc-CCCCCCCEEEecCCcccccCC--hhh---hcCCCeeeccc
Q 004732 205 G--KMTKLKVLDLSFNRLRG----QIPSNF-DDLYDVDYIYFAGNLLTGAIP--PWM---LERGDKIDLSY 263 (733)
Q Consensus 205 ~--~l~~L~~L~ls~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l~~~~p--~~~---l~~l~~l~ls~ 263 (733)
. .+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|.+++..+ ..+ +++++.+++..
T Consensus 269 ~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 269 SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp HTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred hhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 4 49999999999999997 477777 668999999999999997775 333 45555455433
No 338
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=1.7e-21 Score=207.97 Aligned_cols=240 Identities=15% Similarity=0.132 Sum_probs=193.0
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCC-ccccCCcCCce-eec
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELP-EELGSLLNLEK-LHL 96 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 96 (733)
.+.++-++++++ .+|..+ .++|++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| .+|.++++|++ +.+
T Consensus 11 ~~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 11 NRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TTEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CCEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 355677888999 677766 3789999999999996666689999999999999999876666 46899999775 677
Q ss_pred cCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccC-CCCccCCCCCCCCcC-CcCeeecccccCC
Q 004732 97 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQP-SGLAGPIPSGIFSLE-NLTDLRISDLNGP 174 (733)
Q Consensus 97 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~-~L~~L~l~~n~~~ 174 (733)
+.|+|+...|..|..+++|++|++++|+|++..+..+....++..|++.+ |++....+..|..+. .++.|++++|.+.
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999988889999999999999999999977777788888899999865 677755566777765 6889999999999
Q ss_pred CCCccccccccccEEEccc-CccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh-
Q 004732 175 EATFPQLGNMKMTKLILRN-CNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM- 252 (733)
Q Consensus 175 ~~~~~~~~~~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~- 252 (733)
.+....+...+|+.|++++ |.++...+..|.++++|+.|||++|+|+...+.. +.+|+.|.+.++.-...+|..-
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~l~~ 244 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPTLEK 244 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCCTTT
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCCchh
Confidence 9888888888999999985 6677555567899999999999999999544444 4556666666554444666432
Q ss_pred hcCCCeeecccC
Q 004732 253 LERGDKIDLSYN 264 (733)
Q Consensus 253 l~~l~~l~ls~N 264 (733)
+++|+.++++++
T Consensus 245 l~~L~~l~l~~~ 256 (350)
T 4ay9_X 245 LVALMEASLTYP 256 (350)
T ss_dssp CCSCCEEECSCH
T ss_pred CcChhhCcCCCC
Confidence 778888888654
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.4e-22 Score=209.36 Aligned_cols=215 Identities=17% Similarity=0.233 Sum_probs=181.6
Q ss_pred CCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 40 LTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 40 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
+.++..+.+..+.+++.+. +..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++ ++. +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEE
Confidence 3445556677777775443 567889999999999998 566 69999999999999999995 444 99999999999
Q ss_pred eeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCcccccc-ccccEEEcccCccCC
Q 004732 120 ISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGN-MKMTKLILRNCNITG 198 (733)
Q Consensus 120 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~l~~n~l~~ 198 (733)
|++|++++ ++ .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|.+..... +.. .+|+.|++++|.+++
T Consensus 92 L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 92 LSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 99999995 33 68999999999999999986 44 38999999999999999988765 444 489999999999996
Q ss_pred CCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCCC
Q 004732 199 ELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 199 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~~ 270 (733)
..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+.+..|-..+++|+.|++++|++++.+
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEECCC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeecCC
Confidence 544 8999999999999999996543 8899999999999999997765444889999999999987643
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=2.1e-23 Score=224.07 Aligned_cols=239 Identities=14% Similarity=0.169 Sum_probs=192.8
Q ss_pred cceeeeeccccccccccCC----ccccCCC-CCCeeeccccccccccchhccCC-----CCCCEEEcccccccccCCccc
Q 004732 16 KTVNQKRVLKEQNLTGVLP----PKLAELT-FLQDISLIANRLKGPIPKYLANI-----STLVNLTVQYNQFSGELPEEL 85 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~ 85 (733)
...+++|+|++|++++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|++|+|++|.+++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4458999999999998877 7888898 99999999999998888888876 999999999999997766654
Q ss_pred c----CC-cCCceeeccCccccccCCcccc----C-CCCCCEEEeeCCccccCCC----ccccccC-CCCEEEccCCCCc
Q 004732 86 G----SL-LNLEKLHLSSNNFTGELPKTFA----K-LTNMKDFRISDNQFTGQIP----SFIQNWT-KLEKLFIQPSGLA 150 (733)
Q Consensus 86 ~----~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~~----~~~~~l~-~L~~L~l~~N~l~ 150 (733)
. .+ ++|++|+|++|+|++..+..+. . .++|++|+|++|+|++... ..+..++ +|+.|+|++|+++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 4 44 8999999999999976665554 3 3699999999999996444 3445565 9999999999999
Q ss_pred cCCCCCCCC----c-CCcCeeecccccCCCCCccccc------cccccEEEcccCccCCCCC----ccccCCCCCcEEEc
Q 004732 151 GPIPSGIFS----L-ENLTDLRISDLNGPEATFPQLG------NMKMTKLILRNCNITGELP----RYLGKMTKLKVLDL 215 (733)
Q Consensus 151 ~~~p~~l~~----l-~~L~~L~l~~n~~~~~~~~~~~------~~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~l 215 (733)
+..+..+.. + ++|+.|+|++|.+.......+. ..+|+.|+|++|.+++..+ ..+..+++|+.|+|
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L 260 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYL 260 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEE
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEe
Confidence 777655444 4 6999999999999885443222 2379999999999997655 34567899999999
Q ss_pred cCCcccCC-------CCCCcCCCCCCCEEEecCCcccccCChhhhc
Q 004732 216 SFNRLRGQ-------IPSNFDDLYDVDYIYFAGNLLTGAIPPWMLE 254 (733)
Q Consensus 216 s~N~l~~~-------~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~ 254 (733)
++|.+.+. ++..+..+++|+.|++++|.+.+..+.....
T Consensus 261 ~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~~ 306 (362)
T 3goz_A 261 DYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISN 306 (362)
T ss_dssp EHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHHH
T ss_pred ccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHHH
Confidence 99995543 3346778899999999999998776665533
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.3e-21 Score=220.01 Aligned_cols=184 Identities=21% Similarity=0.256 Sum_probs=138.7
Q ss_pred CCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEee
Q 004732 42 FLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRIS 121 (733)
Q Consensus 42 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 121 (733)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 77888888888875 665553 67888888888887 666 446778888888888875 666 554 78888888
Q ss_pred CCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCC
Q 004732 122 DNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELP 201 (733)
Q Consensus 122 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p 201 (733)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.+..++. +. .+|+.|+|++|.|+ .+|
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~-~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP-ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC-TTCCEEECCSSCCS-SCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh-CCCCEEECcCCCCC-chh
Confidence 888875 555 57788888888888875 555 46778888888888777444 44 67888888888888 556
Q ss_pred ccccCCCCC-------cEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh
Q 004732 202 RYLGKMTKL-------KVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM 252 (733)
Q Consensus 202 ~~~~~l~~L-------~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 252 (733)
. |.. +| +.|+|++|+|+ .+|..+..+++|+.|++++|++++.+|..+
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 5 554 67 99999999998 578878889999999999999998888776
No 342
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=4.4e-24 Score=237.17 Aligned_cols=250 Identities=18% Similarity=0.159 Sum_probs=163.7
Q ss_pred eeeeeccccccccc----cCCccccCCCCCCeeeccccccccccchhccC-----CCCCCEEEccccccccc----CCcc
Q 004732 18 VNQKRVLKEQNLTG----VLPPKLAELTFLQDISLIANRLKGPIPKYLAN-----ISTLVNLTVQYNQFSGE----LPEE 84 (733)
Q Consensus 18 ~~~~l~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~----~p~~ 84 (733)
.+++|+|++|+++. .++..|..+++|++|+|++|.+++..+..+.. +++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 58899999999984 56888999999999999999998655544433 56788888888888863 3555
Q ss_pred ccCCcCCceeeccCccccccCCcccc-----CCCCCCEEEeeCCccccC----CCccccccCCCCEEEccCCCCccCC--
Q 004732 85 LGSLLNLEKLHLSSNNFTGELPKTFA-----KLTNMKDFRISDNQFTGQ----IPSFIQNWTKLEKLFIQPSGLAGPI-- 153 (733)
Q Consensus 85 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-- 153 (733)
+..+++|++|+|++|.++...+..+. .+++|++|+|++|++++. ++..+..+++|++|++++|++++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 66778888888888888755444443 256788888888887753 4666667777888888877776432
Q ss_pred ---CCCCCCcCCcCeeecccccCCCCCcc----ccc-cccccEEEcccCccCCCCCccccCC-----CCCcEEEccCCcc
Q 004732 154 ---PSGIFSLENLTDLRISDLNGPEATFP----QLG-NMKMTKLILRNCNITGELPRYLGKM-----TKLKVLDLSFNRL 220 (733)
Q Consensus 154 ---p~~l~~l~~L~~L~l~~n~~~~~~~~----~~~-~~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~ls~N~l 220 (733)
+..+..+++|+.|++++|.+...... .+. ..+|+.|++++|.+++..+..+... ++|+.|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 11222466777777777766654221 122 2356677777776654433333322 4666666666666
Q ss_pred cCC----CCCCcCCCCCCCEEEecCCcccccCChhh-------hcCCCeeecccCcCC
Q 004732 221 RGQ----IPSNFDDLYDVDYIYFAGNLLTGAIPPWM-------LERGDKIDLSYNNFT 267 (733)
Q Consensus 221 ~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-------l~~l~~l~ls~N~l~ 267 (733)
++. ++..+..+++|+.|++++|.+.+..+..+ .++++.|++++|.++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 644 33444555666666666666654433332 135666666666655
No 343
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.85 E-value=5.5e-21 Score=217.65 Aligned_cols=223 Identities=24% Similarity=0.312 Sum_probs=169.2
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeec
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 96 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 96 (733)
+.++.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEEC
Confidence 45778888888888 4554 5688888888888888 4554 6678888888888887 4554 4566777777
Q ss_pred cCccccccCCccccCCCCCCEEEeeCCccccCCCcc---ccc--------------cCCCCEEEccCCCCccCCCCCCCC
Q 004732 97 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSF---IQN--------------WTKLEKLFIQPSGLAGPIPSGIFS 159 (733)
Q Consensus 97 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~--------------l~~L~~L~l~~N~l~~~~p~~l~~ 159 (733)
++|+|+ .+|.. +++|++|+|++|+|++ +|.. +.. +++|+.|+|++|+|++ +|..
T Consensus 129 ~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~--- 199 (622)
T 3g06_A 129 FGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTL--- 199 (622)
T ss_dssp CSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCC---
T ss_pred CCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCc---
Confidence 777777 35543 3667777777776664 2222 222 3889999999999984 5543
Q ss_pred cCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEe
Q 004732 160 LENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYF 239 (733)
Q Consensus 160 l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 239 (733)
+++|+.|++++|.+...+.. ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|++
T Consensus 200 ~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~L 268 (622)
T 3g06_A 200 PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSV 268 (622)
T ss_dssp CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEEC
T ss_pred cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeC
Confidence 47899999999999876532 2579999999999996 55 56789999999999999 5665 6789999999
Q ss_pred cCCcccccCChhh--hcCCCeeecccCcCCCCCCc
Q 004732 240 AGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAE 272 (733)
Q Consensus 240 ~~N~l~~~~p~~~--l~~l~~l~ls~N~l~~~~~~ 272 (733)
++|.++ .+|..+ +++|+.|++++|++++..+.
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 999999 778776 78899999999999865443
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=9.9e-23 Score=216.40 Aligned_cols=231 Identities=18% Similarity=0.182 Sum_probs=193.1
Q ss_pred ceeeeeccccccccccCCccccCCCCCCeeeccccccccc-cchhccCCCCCCEEEcccccccccCCccccCCcCCceee
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGP-IPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLH 95 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 95 (733)
...+.+++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4578889999999988775 56899999999999999876 888899999999999999999988999999999999999
Q ss_pred ccCc-cccc-cCCccccCCCCCCEEEeeCC-ccccC-CCccccccC-CCCEEEccCC--CCc-cCCCCCCCCcCCcCeee
Q 004732 96 LSSN-NFTG-ELPKTFAKLTNMKDFRISDN-QFTGQ-IPSFIQNWT-KLEKLFIQPS--GLA-GPIPSGIFSLENLTDLR 167 (733)
Q Consensus 96 Ls~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~p~~l~~l~~L~~L~ 167 (733)
|++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 7886 37777889999999999999 99864 677889999 9999999999 555 45677778899999999
Q ss_pred ccccc-CCCCCccccccc-cccEEEcccCc-cCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCC-CCCCEEEecCCc
Q 004732 168 ISDLN-GPEATFPQLGNM-KMTKLILRNCN-ITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDL-YDVDYIYFAGNL 243 (733)
Q Consensus 168 l~~n~-~~~~~~~~~~~~-~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~ 243 (733)
+++|. ++...+..+... +|+.|++++|. +.......++++++|+.|++++| ++ ...+..+ .+++.|++++|.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEeccc
Confidence 99999 666666666554 89999999995 33222236889999999999999 44 2234444 247777899999
Q ss_pred ccccCChhh
Q 004732 244 LTGAIPPWM 252 (733)
Q Consensus 244 l~~~~p~~~ 252 (733)
+++..|...
T Consensus 305 l~~~~~~~~ 313 (336)
T 2ast_B 305 FTTIARPTI 313 (336)
T ss_dssp SCCTTCSSC
T ss_pred CccccCCcc
Confidence 999888764
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=6.8e-21 Score=214.25 Aligned_cols=187 Identities=24% Similarity=0.274 Sum_probs=122.8
Q ss_pred eeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 18 ~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 45667777777775 555442 66777777777777 555 445677777777777774 565 554 67777777
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEAT 177 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~ 177 (733)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|.+..++
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchh
Confidence 777774 554 56677777777777774 554 45677777777777775 555 44 67777777777776544
Q ss_pred ccccccccc-------cEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCC
Q 004732 178 FPQLGNMKM-------TKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDL 231 (733)
Q Consensus 178 ~~~~~~~~L-------~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 231 (733)
. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|.|++.+|..+..+
T Consensus 197 ~--~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 197 A--VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C--CC---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred h--HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 4 333 55 77777777777 456666667777777777777777666665554
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=4.4e-21 Score=188.87 Aligned_cols=151 Identities=20% Similarity=0.191 Sum_probs=124.5
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
..++.++++++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45667788887 445444 368999999999999777777899999999999999999666667889999999999999
Q ss_pred cccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccC
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNG 173 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 173 (733)
+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 99966667788999999999999999977777788999999999999999866666677788887777766543
No 347
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=4.1e-23 Score=229.35 Aligned_cols=258 Identities=19% Similarity=0.218 Sum_probs=205.4
Q ss_pred cccceeeeeccccccccccCCcccc-CCC----CCCeeecccccccc----ccchhccCCCCCCEEEcccccccccCCcc
Q 004732 14 KQKTVNQKRVLKEQNLTGVLPPKLA-ELT----FLQDISLIANRLKG----PIPKYLANISTLVNLTVQYNQFSGELPEE 84 (733)
Q Consensus 14 ~~~~~~~~l~L~~n~l~~~~p~~l~-~l~----~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 84 (733)
...+.+++|+|++|+++...+..+. .++ +|++|+|++|+|+. .++..|..+++|++|+|++|.+++..+..
T Consensus 53 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 132 (461)
T 1z7x_W 53 RVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL 132 (461)
T ss_dssp HTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH
T ss_pred HhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH
Confidence 3457789999999999875554443 355 79999999999994 56889999999999999999998655544
Q ss_pred cc-----CCcCCceeeccCcccccc----CCccccCCCCCCEEEeeCCccccCCCcccc-----ccCCCCEEEccCCCCc
Q 004732 85 LG-----SLLNLEKLHLSSNNFTGE----LPKTFAKLTNMKDFRISDNQFTGQIPSFIQ-----NWTKLEKLFIQPSGLA 150 (733)
Q Consensus 85 ~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~ 150 (733)
+. .+++|++|+|++|++++. ++..+..+++|++|++++|.++...+..+. ..++|+.|+|++|+++
T Consensus 133 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 212 (461)
T 1z7x_W 133 LCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT 212 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCB
T ss_pred HHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCc
Confidence 33 356899999999999974 366677889999999999999865555444 3679999999999998
Q ss_pred cC----CCCCCCCcCCcCeeecccccCCCCCcccc------ccccccEEEcccCccCCC----CCccccCCCCCcEEEcc
Q 004732 151 GP----IPSGIFSLENLTDLRISDLNGPEATFPQL------GNMKMTKLILRNCNITGE----LPRYLGKMTKLKVLDLS 216 (733)
Q Consensus 151 ~~----~p~~l~~l~~L~~L~l~~n~~~~~~~~~~------~~~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls 216 (733)
+. ++..+..+++|+.|++++|.+.......+ ...+|+.|++++|.++.. ++..+..+++|++|+|+
T Consensus 213 ~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 213 SDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp TTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC
Confidence 64 57777889999999999998876543222 234899999999999864 67778889999999999
Q ss_pred CCcccCCCCCCcCC-----CCCCCEEEecCCcccccC----Chhh--hcCCCeeecccCcCCCCCC
Q 004732 217 FNRLRGQIPSNFDD-----LYDVDYIYFAGNLLTGAI----PPWM--LERGDKIDLSYNNFTDGSA 271 (733)
Q Consensus 217 ~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~----p~~~--l~~l~~l~ls~N~l~~~~~ 271 (733)
+|.+++..+..+.. .++|+.|++++|.+++.. +..+ .++++.|++++|.+.+...
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 99998655544433 269999999999998653 3333 5789999999999876433
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.6e-20 Score=184.83 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=127.4
Q ss_pred CeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCC
Q 004732 44 QDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDN 123 (733)
Q Consensus 44 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (733)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 57788888888 556444 468899999999998666667888899999999999998666666788889999999999
Q ss_pred ccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCcc
Q 004732 124 QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRY 203 (733)
Q Consensus 124 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~ 203 (733)
+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++ |.+++..+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-----------------------N~l~~~~~~~ 143 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQ-----------------------NQLKSVPDGV 143 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS-----------------------SCCSCCCTTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCC-----------------------CccceeCHHH
Confidence 98876666788888888888888888866666667777766665555 5555444444
Q ss_pred ccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh
Q 004732 204 LGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM 252 (733)
Q Consensus 204 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 252 (733)
|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.++
T Consensus 144 ~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~ 185 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 185 (208)
T ss_dssp TTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTT
T ss_pred hccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccC
Confidence 56666666666666655532 3456666666666666666543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.5e-20 Score=196.99 Aligned_cols=216 Identities=18% Similarity=0.154 Sum_probs=178.2
Q ss_pred CeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCC-ccccCCCCCCE-EEee
Q 004732 44 QDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELP-KTFAKLTNMKD-FRIS 121 (733)
Q Consensus 44 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~l~ 121 (733)
+.++.++++|+ .+|..+ .++|++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++|.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57899999999 788766 3689999999999995555679999999999999999876665 56889998875 6777
Q ss_pred CCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeeccc-ccCCCCCccccccc--cccEEEcccCccCC
Q 004732 122 DNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISD-LNGPEATFPQLGNM--KMTKLILRNCNITG 198 (733)
Q Consensus 122 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~-n~~~~~~~~~~~~~--~L~~L~l~~n~l~~ 198 (733)
+|+|+...|+.|.++++|++|++++|+|+...+..+....++..|++.+ +.+.......+... .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988889999999999999999999977777777888889999976 56666666655554 58899999999995
Q ss_pred CCCccccCCCCCcEEEccC-CcccCCCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccC
Q 004732 199 ELPRYLGKMTKLKVLDLSF-NRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYN 264 (733)
Q Consensus 199 ~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N 264 (733)
. +.......+|+.|++++ |.++...+..|..+++|+.|++++|.|+ .+|...+.+++.|.+.++
T Consensus 169 i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 169 I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARST 233 (350)
T ss_dssp E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTC
T ss_pred C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccC
Confidence 4 54444667899999985 6677544567899999999999999998 677777788888876554
No 350
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.5e-19 Score=179.34 Aligned_cols=153 Identities=19% Similarity=0.196 Sum_probs=131.9
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 456788899988 5666654 7899999999999987777899999999999999999988899999999999999999
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGP 174 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 174 (733)
|+|+...+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9999666666788999999999999999888889999999999999999999777777888888887777776543
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=4.8e-20 Score=191.33 Aligned_cols=186 Identities=21% Similarity=0.308 Sum_probs=129.4
Q ss_pred eccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccc
Q 004732 22 RVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNF 101 (733)
Q Consensus 22 l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 101 (733)
+.+..+.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|+|++|++++. +. +..+++|+.|+|++|++
T Consensus 29 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l 102 (291)
T 1h6t_A 29 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKV 102 (291)
T ss_dssp HHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred HHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcC
Confidence 346666666543 34567888888888888874 33 477788888888888888753 33 77888888888888888
Q ss_pred cccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCcccc
Q 004732 102 TGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQL 181 (733)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~ 181 (733)
++ +| .+..+++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|
T Consensus 103 ~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L------------------ 158 (291)
T 1h6t_A 103 KD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKL------------------ 158 (291)
T ss_dssp CC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTC------------------
T ss_pred CC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCC------------------
Confidence 74 33 377788888888888887753 4577777788887777777643 344444444
Q ss_pred ccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccc
Q 004732 182 GNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTG 246 (733)
Q Consensus 182 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 246 (733)
+.|++++|.+++..+ +..+++|+.|+|++|.+++ ++ .+..+++|+.|++++|++..
T Consensus 159 -----~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 159 -----DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -----SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -----CEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 455556666665444 7777788888888888774 33 37777788888888887763
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=6.9e-20 Score=208.36 Aligned_cols=189 Identities=22% Similarity=0.302 Sum_probs=132.1
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
...+.|..++++..++ +..|++|+.|+|++|.|.. ++ .|..+++|+.|+|++|.|++..| |..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3445677777776544 5678889999999999884 44 58889999999999999985444 88899999999999
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
|.|++ +| .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+....+
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 99884 44 68888999999999999885 3 4588888999999999888854 566667777766666655554433
Q ss_pred cccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC
Q 004732 179 PQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG 222 (733)
Q Consensus 179 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 222 (733)
.....+|+.|+|++|.|++. ..+..+++|+.|+|++|++++
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 11122455555555555432 234455555555555555543
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=4.1e-20 Score=191.78 Aligned_cols=171 Identities=21% Similarity=0.333 Sum_probs=143.2
Q ss_pred ccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCcee
Q 004732 15 QKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 94 (733)
Q Consensus 15 ~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 94 (733)
..+.++.|++++|+++.. + .+..+++|+.|+|++|++++..+ +.++++|++|+|++|.+++ ++ .+..+++|+.|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 355678999999999965 3 58999999999999999996554 9999999999999999995 44 49999999999
Q ss_pred eccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCC
Q 004732 95 HLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGP 174 (733)
Q Consensus 95 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 174 (733)
+|++|++++ + ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+ +..+++|+.|++
T Consensus 118 ~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L------ 185 (291)
T 1h6t_A 118 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL------ 185 (291)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC------
T ss_pred ECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC------
Confidence 999999995 4 5689999999999999999964 679999999999999999986544 666666665554
Q ss_pred CCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC
Q 004732 175 EATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG 222 (733)
Q Consensus 175 ~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 222 (733)
++|.+++. + .+..+++|+.|++++|+++.
T Consensus 186 -----------------~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 186 -----------------SKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -----------------CSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred -----------------CCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 55556543 3 37888999999999999885
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=8e-19 Score=175.31 Aligned_cols=51 Identities=31% Similarity=0.425 Sum_probs=34.2
Q ss_pred CCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCC
Q 004732 199 ELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIP 249 (733)
Q Consensus 199 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 249 (733)
.+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..+
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 344455666667777777777775555667777777777777777776654
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.7e-19 Score=177.56 Aligned_cols=153 Identities=14% Similarity=0.177 Sum_probs=131.7
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccc-hhccCCCCCCEEEcccccccccCCccccCCcCCceeecc
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIP-KYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLS 97 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 97 (733)
.+.+++++|+++. +|..+. +.++.|+|++|+|++..+ ..|.++++|++|+|++|.|++..+.+|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 4678899999984 676654 457899999999997755 458899999999999999998777789999999999999
Q ss_pred CccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCC
Q 004732 98 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGP 174 (733)
Q Consensus 98 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 174 (733)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+.
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 99999888888999999999999999999888899999999999999999999888888888888887777766544
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.1e-19 Score=206.59 Aligned_cols=192 Identities=19% Similarity=0.316 Sum_probs=164.6
Q ss_pred CCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 40 LTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 40 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
+..+..+.|..+.+....+ +..|++|+.|+|++|.+. .++ .|..|++|+.|+|++|+|++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 4557778888888886554 678899999999999998 555 59999999999999999996555 99999999999
Q ss_pred eeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCC
Q 004732 120 ISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITG 198 (733)
Q Consensus 120 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~ 198 (733)
|++|+|++ ++ .+..+++|+.|+|++|+|.+ + ..+..+++|+.|+|++|.+... ..+..+ +|+.|+|++|.|++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 99999995 44 68999999999999999985 3 5688999999999999999887 344444 89999999999997
Q ss_pred CCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccccc
Q 004732 199 ELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGA 247 (733)
Q Consensus 199 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 247 (733)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 766 89999999999999999963 4588899999999999999753
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.2e-19 Score=192.42 Aligned_cols=179 Identities=21% Similarity=0.289 Sum_probs=93.4
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhcc-CCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLA-NISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
+.+++++++|+. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 345555555552 343332 3355555555555544444444 555555555555555544444555555555555555
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++ +|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~------------------------ 152 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FP------------------------ 152 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CC------------------------
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eC------------------------
Confidence 55554444445555555555555555554444444444555444444444442 11
Q ss_pred cccccccccEEEcccCccCCCCCccc---cCCCCCcEEEccCCcccCCCCCCcCCCCC--CCEEEecCCcccccC
Q 004732 179 PQLGNMKMTKLILRNCNITGELPRYL---GKMTKLKVLDLSFNRLRGQIPSNFDDLYD--VDYIYFAGNLLTGAI 248 (733)
Q Consensus 179 ~~~~~~~L~~L~l~~n~l~~~~p~~~---~~l~~L~~L~ls~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~ 248 (733)
+..| ..+++|+.|+|++|+|++..+..+..++. |+.|++++|++.+..
T Consensus 153 ----------------------~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 153 ----------------------VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp ----------------------GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ----------------------HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 1112 44666667777777766544455555555 367777888776554
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.5e-19 Score=192.01 Aligned_cols=156 Identities=20% Similarity=0.113 Sum_probs=91.9
Q ss_pred CceeeccCccccccCCcccc-CCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecc
Q 004732 91 LEKLHLSSNNFTGELPKTFA-KLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRIS 169 (733)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 169 (733)
|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----- 115 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALE----- 115 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-----
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCC-----
Confidence 44444444444433333333 444444444444444443334444444444444444444433333344443333
Q ss_pred cccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCc---CCCCCCCEEEecCCcccc
Q 004732 170 DLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNF---DDLYDVDYIYFAGNLLTG 246 (733)
Q Consensus 170 ~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~ 246 (733)
.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|.+.+
T Consensus 116 ------------------~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 116 ------------------VLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp ------------------EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred ------------------EEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 33344455555567778889999999999999996555555 579999999999999995
Q ss_pred cCChhh--hcC--CCeeecccCcCCCC
Q 004732 247 AIPPWM--LER--GDKIDLSYNNFTDG 269 (733)
Q Consensus 247 ~~p~~~--l~~--l~~l~ls~N~l~~~ 269 (733)
..+..+ ++. ++.|++++|++.|.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred cCHHHhhhccHhhcceEEecCCCccCC
Confidence 433333 332 36799999999875
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=9.4e-19 Score=174.82 Aligned_cols=153 Identities=20% Similarity=0.203 Sum_probs=130.7
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
...++.++++++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456778888887 6666554 8999999999999988899999999999999999999865556789999999999999
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999777777899999999999999999 788889999999999999999996666678888888877777665543
No 360
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=4.4e-20 Score=187.94 Aligned_cols=136 Identities=18% Similarity=0.153 Sum_probs=106.3
Q ss_pred ccccCcccCCCcccEEEccc-CCCcE--EEEEEccccChh------------------------cHHHHHHHHHHHHhCC
Q 004732 395 FATDNNIGEGGFGPVYKGLL-ADGTA--IAVKQLSSKSKQ------------------------GNREFINEIGMISALQ 447 (733)
Q Consensus 395 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 447 (733)
|...+.||+|+||.||+|.. .+|+. ||||.+...... ....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 78989 999987543111 1136788999999998
Q ss_pred CCce--eeEeeEEEeCCeEEEEEEccCC-C----CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCeecCCC
Q 004732 448 HPNL--VKLYGCCIEGNQLLLIYEYLEN-N----SLARALFEHRLKLDWPTRRRICLGIARGLAYLH-GESRIKVVHRDI 519 (733)
Q Consensus 448 h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~Di 519 (733)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +.| |+||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE---LVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCCC
Confidence 8764 333332 356899999943 4 67665432 235678899999999999999 886 999999
Q ss_pred CCCcEEecCCCCeEEcccCccccC
Q 004732 520 KATNVLLDKDLNSKISDFGLAKLD 543 (733)
Q Consensus 520 k~~Nill~~~~~~kl~DfGla~~~ 543 (733)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999754
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.4e-18 Score=172.49 Aligned_cols=156 Identities=19% Similarity=0.229 Sum_probs=123.6
Q ss_pred CEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCC
Q 004732 68 VNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPS 147 (733)
Q Consensus 68 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 147 (733)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57888888888 6776554 57888888888888666667888888888888888888777788888888888888888
Q ss_pred CCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCC
Q 004732 148 GLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSN 227 (733)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 227 (733)
+|+...+..|.++++|+ .|+|++|.|++..|..|..+++|+.|+|++|+|++..+..
T Consensus 91 ~l~~l~~~~f~~l~~L~-----------------------~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQ-----------------------LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp CCCCCCTTTTTTCTTCC-----------------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccCHhHccCCCCCC-----------------------EEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 88744444455555554 5566677788777888999999999999999999888888
Q ss_pred cCCCCCCCEEEecCCcccccCC
Q 004732 228 FDDLYDVDYIYFAGNLLTGAIP 249 (733)
Q Consensus 228 ~~~l~~L~~L~l~~N~l~~~~p 249 (733)
|..+++|+.|++++|++.+...
T Consensus 148 ~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TTTCTTCCEEECCSSCEECSGG
T ss_pred HhCCCCCCEEEeCCCCcCCCCc
Confidence 9999999999999999986544
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=172.55 Aligned_cols=157 Identities=19% Similarity=0.272 Sum_probs=124.9
Q ss_pred CEEEcccccccccCCccccCCcCCceeeccCccccccCC-ccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccC
Q 004732 68 VNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQP 146 (733)
Q Consensus 68 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 146 (733)
+.|++++|.++ .+|..+.. .++.|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 57888888887 57765543 46788888888886644 4477888888888888888877677788888888888888
Q ss_pred CCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCC
Q 004732 147 SGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPS 226 (733)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 226 (733)
|+|++..+..|..+++|+ .|+|++|.|++..|..|..+++|+.|+|++|+|++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~-----------------------~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLK-----------------------TLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCC-----------------------EEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCC-----------------------EEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 888766665666665555 555667778878888899999999999999999988899
Q ss_pred CcCCCCCCCEEEecCCcccccCCh
Q 004732 227 NFDDLYDVDYIYFAGNLLTGAIPP 250 (733)
Q Consensus 227 ~~~~l~~L~~L~l~~N~l~~~~p~ 250 (733)
.|..+++|+.|++++|++.+..+.
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECSGGG
T ss_pred HhcCCCCCCEEEecCcCCcCCCch
Confidence 999999999999999999887664
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.4e-20 Score=212.78 Aligned_cols=182 Identities=16% Similarity=0.164 Sum_probs=122.8
Q ss_pred cCCCCCCeeeccccccccccchhccCCCCCCEEEccccc-------------ccccCCccccCCcCCceee-ccCccccc
Q 004732 38 AELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQ-------------FSGELPEELGSLLNLEKLH-LSSNNFTG 103 (733)
Q Consensus 38 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 103 (733)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56788999999999998 789999999999999987775 5667777888888888888 6666543
Q ss_pred cCCc------cccC--CCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC
Q 004732 104 ELPK------TFAK--LTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 104 ~~p~------~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
.++. .+.. ...|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..++.+++|+.|+|++
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~----- 495 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASD----- 495 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS-----
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCC-----
Confidence 1111 0111 1247777777777774 565 777777777777777777 6677777776666665555
Q ss_pred CCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCC-CCCcCCCCCCCEEEecCCcccccCC
Q 004732 176 ATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQI-PSNFDDLYDVDYIYFAGNLLTGAIP 249 (733)
Q Consensus 176 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p 249 (733)
|.|++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|++++|++++..|
T Consensus 496 ------------------N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 496 ------------------NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp ------------------SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ------------------CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 44553 33 4555666666666666666554 5556666666666666666654443
No 364
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.1e-19 Score=209.54 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=121.5
Q ss_pred eeeeccccccccccCCccccCCCCCCee-----eccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCce
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDI-----SLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEK 93 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L-----~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 93 (733)
...+.|.+|++... +..+.....|..+ ++..|++. ..+..|..++.|+.|+|++|.+. .+|..+..+++|++
T Consensus 175 ~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 175 TPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTR 251 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSC
T ss_pred cceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCE
Confidence 45678888888863 4444333333332 33344444 56788999999999999999998 88888889999999
Q ss_pred eeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccC
Q 004732 94 LHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNG 173 (733)
Q Consensus 94 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 173 (733)
|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+ .+|..|+.|++|+.|+|++|.+
T Consensus 252 L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 252 LYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp CBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred EEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 999999999 89999999999999999999999 78999999999999999999997 7898999999999999999998
Q ss_pred CCCCcccccccc--ccEEEcccCccCCCCCccccCCCCCcEEEccCC
Q 004732 174 PEATFPQLGNMK--MTKLILRNCNITGELPRYLGKMTKLKVLDLSFN 218 (733)
Q Consensus 174 ~~~~~~~~~~~~--L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N 218 (733)
....+..+...+ +..|+|++|.+++.+|.. |+.|++++|
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 887776665542 335678888888887764 445666666
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=6.8e-19 Score=179.70 Aligned_cols=170 Identities=23% Similarity=0.354 Sum_probs=95.3
Q ss_pred CCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 40 LTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 40 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
+.++..+++++|.+++. + .+..+++|++|++++|.++ .++ .+..+++|+.|+|++|+|++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 44455556666666532 2 3555666666666666665 344 45566666666666666663322 55666666666
Q ss_pred eeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCC
Q 004732 120 ISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGE 199 (733)
Q Consensus 120 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 199 (733)
|++|++++ ++... . ++|+.|+|++|++++. ..+..+++|+. |++++|++++.
T Consensus 92 L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~-----------------------L~Ls~N~i~~~ 143 (263)
T 1xeu_A 92 VNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEI-----------------------LSIRNNKLKSI 143 (263)
T ss_dssp CCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCE-----------------------EECTTSCCCBC
T ss_pred CCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccE-----------------------EECCCCcCCCC
Confidence 66666663 33222 2 5666666666666532 12444444443 33444444433
Q ss_pred CCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccccc
Q 004732 200 LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGA 247 (733)
Q Consensus 200 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 247 (733)
+ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++.+.
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 456666777777777777654 5566677777777777777644
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=3.4e-18 Score=166.55 Aligned_cols=156 Identities=17% Similarity=0.211 Sum_probs=105.9
Q ss_pred cccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCC
Q 004732 36 KLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNM 115 (733)
Q Consensus 36 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 115 (733)
....+++|+.|++++|.|+ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3456677777777777777 455 5777777777777777655 23467777777777777777776667777777777
Q ss_pred CEEEeeCCccccCCCccccccCCCCEEEccCCC-CccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccC
Q 004732 116 KDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSG-LAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNC 194 (733)
Q Consensus 116 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n 194 (733)
++|+|++|++++..+..++.+++|+.|++++|+ ++ .+| .+..+++ |+.|++++|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~-----------------------L~~L~l~~n 169 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPE-----------------------LKSLNIQFD 169 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSS-----------------------CCEEECTTB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCC-----------------------CCEEECCCC
Confidence 777777777776666777777777777777776 44 333 3444444 445556666
Q ss_pred ccCCCCCccccCCCCCcEEEccCCcccC
Q 004732 195 NITGELPRYLGKMTKLKVLDLSFNRLRG 222 (733)
Q Consensus 195 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 222 (733)
.+++. + .+..+++|+.|++++|++.+
T Consensus 170 ~i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCCC-T-TGGGCSSCCEEEECBC----
T ss_pred CCcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 66643 3 67788889999999988764
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=4.2e-18 Score=165.87 Aligned_cols=152 Identities=18% Similarity=0.187 Sum_probs=132.8
Q ss_pred ccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCcee
Q 004732 15 QKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 94 (733)
Q Consensus 15 ~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 94 (733)
....++.++|++|+++ .+| .+..+++|++|+|++|.++ . +..+..+++|++|+|++|.+++..+..|+.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3556889999999999 556 7999999999999999877 3 3479999999999999999998889999999999999
Q ss_pred eccCccccccCCccccCCCCCCEEEeeCCc-cccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccC
Q 004732 95 HLSSNNFTGELPKTFAKLTNMKDFRISDNQ-FTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNG 173 (733)
Q Consensus 95 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 173 (733)
+|++|++++..|..+..+++|++|+|++|+ ++ .++ .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 999999998889999999999999999998 55 566 68999999999999999985 44 788888888888888775
Q ss_pred C
Q 004732 174 P 174 (733)
Q Consensus 174 ~ 174 (733)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=4.4e-20 Score=208.68 Aligned_cols=187 Identities=17% Similarity=0.157 Sum_probs=139.4
Q ss_pred cCCCCCCEEEcccccccccCCccccCCcCCceeeccCcc-------------ccccCCccccCCCCCCEEE-eeCCcccc
Q 004732 62 ANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNN-------------FTGELPKTFAKLTNMKDFR-ISDNQFTG 127 (733)
Q Consensus 62 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-l~~N~l~~ 127 (733)
..+++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56789999999999998 889999999999999998776 5566777777777887777 5655443
Q ss_pred CCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccC
Q 004732 128 QIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGK 206 (733)
Q Consensus 128 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~ 206 (733)
.|..+.+++|.++...+ ..|+.|+|++|.+...+. ++.+ +|+.|+|++|.|+ .+|..|++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCCCcC--ccccccCcEeecCccccc-ccchhhhc
Confidence 12222223333321111 124445555554444321 2322 5667778888888 78899999
Q ss_pred CCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccC-Chhh--hcCCCeeecccCcCCCCCC
Q 004732 207 MTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAI-PPWM--LERGDKIDLSYNNFTDGSA 271 (733)
Q Consensus 207 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~--l~~l~~l~ls~N~l~~~~~ 271 (733)
+++|+.|+|++|+|++ +| .+..+++|+.|++++|.+++.. |..+ +++|+.|++++|++++.++
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 9999999999999996 67 8999999999999999999876 8877 7899999999999987654
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.9e-18 Score=176.47 Aligned_cols=172 Identities=20% Similarity=0.287 Sum_probs=125.0
Q ss_pred CCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEE
Q 004732 63 NISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKL 142 (733)
Q Consensus 63 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 142 (733)
.+.++..|++++|.+++ ++ .+..+++|+.|+|++|.|+ .++ .+..+++|+.|+|++|+|++..+ +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 34556667777777763 33 4667777777777777776 455 56677777777777777774333 6677777777
Q ss_pred EccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccccEEEcccCccCCCCCccccCCCCCcEEEccCCcccC
Q 004732 143 FIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRG 222 (733)
Q Consensus 143 ~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 222 (733)
+|++|++++ +|.. . ..+|+.|++++|.+++. ..+..+++|+.|+|++|++++
T Consensus 91 ~L~~N~l~~-l~~~-----------------------~--~~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-----------------------P--SACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp ECCSSCCSC-CTTC-----------------------C--CSSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccCC-cCcc-----------------------c--cCcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC
Confidence 777777663 2211 1 14567788888888864 358999999999999999996
Q ss_pred CCCCCcCCCCCCCEEEecCCcccccCChhhhcCCCeeecccCcCCCCC
Q 004732 223 QIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 223 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~l~~l~ls~N~l~~~~ 270 (733)
. + .+..+++|+.|++++|.+.+...-.-+++|+.|++++|++.+.+
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECCC
T ss_pred C-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCCc
Confidence 4 4 68999999999999999997722223788999999999998764
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.1e-18 Score=203.56 Aligned_cols=167 Identities=19% Similarity=0.164 Sum_probs=125.8
Q ss_pred eeeeccccccccc---------cCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCc
Q 004732 19 NQKRVLKEQNLTG---------VLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLL 89 (733)
Q Consensus 19 ~~~l~L~~n~l~~---------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 89 (733)
++.++|+.|+|.+ ..+..|..++.|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|+.|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 4555666666554 44778999999999999999999 78888889999999999999999 8999999999
Q ss_pred CCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCC-cCeeec
Q 004732 90 NLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLEN-LTDLRI 168 (733)
Q Consensus 90 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L~~L~l 168 (733)
+|+.|+|++|+|+ .+|..|.+|++|++|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 9999999999999 88999999999999999999998 78988999999999999999999988888766433 235789
Q ss_pred ccccCCCCCccccccccccEEEcccC
Q 004732 169 SDLNGPEATFPQLGNMKMTKLILRNC 194 (733)
Q Consensus 169 ~~n~~~~~~~~~~~~~~L~~L~l~~n 194 (733)
++|.+....+.. |..|+++.|
T Consensus 349 ~~N~l~~~~p~~-----l~~l~l~~n 369 (727)
T 4b8c_D 349 RDNRPEIPLPHE-----RRFIEINTD 369 (727)
T ss_dssp HHCCCCCCCCCC--------------
T ss_pred ccCcccCcCccc-----cceeEeecc
Confidence 999988766653 556777766
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.1e-17 Score=158.95 Aligned_cols=130 Identities=19% Similarity=0.295 Sum_probs=103.9
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccch-hccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPK-YLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
+.+++++|+++ .+|..+.. +|+.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56788888886 56665543 788888888888865554 478888888888888888877788888888888888888
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP 152 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 152 (733)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 888877777788888888888888888887788888888888888888888744
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.2e-17 Score=160.10 Aligned_cols=130 Identities=19% Similarity=0.301 Sum_probs=115.8
Q ss_pred CeeeccccccccccchhccCCCCCCEEEcccccccccCCc-cccCCcCCceeeccCccccccCCccccCCCCCCEEEeeC
Q 004732 44 QDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPE-ELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISD 122 (733)
Q Consensus 44 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 122 (733)
+.|++++|+|+ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999997 77876654 899999999999966554 489999999999999999988899999999999999999
Q ss_pred CccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCC
Q 004732 123 NQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEA 176 (733)
Q Consensus 123 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~ 176 (733)
|+|++..+..|.++++|++|+|++|+|++..|..+..+++|+.|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 999988888899999999999999999998899999999998888888776643
No 373
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.69 E-value=8.2e-19 Score=201.08 Aligned_cols=190 Identities=14% Similarity=0.081 Sum_probs=104.1
Q ss_pred CCccccCCcCCceeeccCccccccCC-ccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEcc--------------
Q 004732 81 LPEELGSLLNLEKLHLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQ-------------- 145 (733)
Q Consensus 81 ~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~-------------- 145 (733)
+|..+..+++|++|+|++|.+++... ..+..+++|++|++++|...+.++..+..+++|++|+|+
T Consensus 285 l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~ 364 (592)
T 3ogk_B 285 MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGL 364 (592)
T ss_dssp GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCC
T ss_pred HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCc
Confidence 34455667788888888888765433 335566777777776332222233333455555555555
Q ss_pred ----------------------CCCCccCCCCCCCC-cCCcCeeecc----cccCCCCCcc-----ccc-cccccEEEcc
Q 004732 146 ----------------------PSGLAGPIPSGIFS-LENLTDLRIS----DLNGPEATFP-----QLG-NMKMTKLILR 192 (733)
Q Consensus 146 ----------------------~N~l~~~~p~~l~~-l~~L~~L~l~----~n~~~~~~~~-----~~~-~~~L~~L~l~ 192 (733)
.|++++..+..++. +++|+.|+++ .|.++..+.. .+. ..+|+.|+++
T Consensus 365 ~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 365 VSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY 444 (592)
T ss_dssp CCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEe
Confidence 33333333333332 4445555553 2333322110 011 1245556655
Q ss_pred cCc--cCCCCCcccc-CCCCCcEEEccCCcccCC-CCCCcCCCCCCCEEEecCCcccccCChhh---hcCCCeeecccCc
Q 004732 193 NCN--ITGELPRYLG-KMTKLKVLDLSFNRLRGQ-IPSNFDDLYDVDYIYFAGNLLTGAIPPWM---LERGDKIDLSYNN 265 (733)
Q Consensus 193 ~n~--l~~~~p~~~~-~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---l~~l~~l~ls~N~ 265 (733)
.|. +++.....+. .+++|+.|+|++|++++. ++..+..+++|+.|++++|.+++.....+ +++|+.|++++|+
T Consensus 445 ~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 445 LRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp CCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 322 4443333333 367777778877777652 34445667788888888888764433333 5678888888888
Q ss_pred CCCCC
Q 004732 266 FTDGS 270 (733)
Q Consensus 266 l~~~~ 270 (733)
+++..
T Consensus 525 it~~~ 529 (592)
T 3ogk_B 525 ASMTG 529 (592)
T ss_dssp CCTTC
T ss_pred CCHHH
Confidence 76543
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=6.5e-17 Score=153.09 Aligned_cols=134 Identities=23% Similarity=0.196 Sum_probs=92.8
Q ss_pred CCCCeeeccccccc-cccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 41 TFLQDISLIANRLK-GPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 41 ~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 66777777777776 56666677777777777777777744 6677777777777777777765666666677777777
Q ss_pred eeCCccccCC-CccccccCCCCEEEccCCCCccCCC---CCCCCcCCcCeeecccccCCCC
Q 004732 120 ISDNQFTGQI-PSFIQNWTKLEKLFIQPSGLAGPIP---SGIFSLENLTDLRISDLNGPEA 176 (733)
Q Consensus 120 l~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~L~l~~n~~~~~ 176 (733)
|++|+|++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 7777777432 2567777777777777777774433 3666677777777666655443
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=8e-17 Score=152.46 Aligned_cols=138 Identities=22% Similarity=0.192 Sum_probs=123.2
Q ss_pred cceeeeecccccccc-ccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCcee
Q 004732 16 KTVNQKRVLKEQNLT-GVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 94 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 94 (733)
.+.++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|.+++.+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356889999999999 78899999999999999999999966 789999999999999999997788888889999999
Q ss_pred eccCccccccC-CccccCCCCCCEEEeeCCccccCCC---ccccccCCCCEEEccCCCCccCCCCC
Q 004732 95 HLSSNNFTGEL-PKTFAKLTNMKDFRISDNQFTGQIP---SFIQNWTKLEKLFIQPSGLAGPIPSG 156 (733)
Q Consensus 95 ~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~p~~ 156 (733)
+|++|+|++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+. .+|.+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999999532 2789999999999999999996555 48999999999999999997 45543
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=2.8e-16 Score=152.27 Aligned_cols=128 Identities=21% Similarity=0.277 Sum_probs=97.0
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
...+++++|+++ .+|..+. ++|+.|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 345677788877 5565543 57888888888887 6667788888888888888888866667788888888888888
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 150 (733)
|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 8888777777778888888888888888655556777777777777777775
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=5.3e-17 Score=150.37 Aligned_cols=127 Identities=20% Similarity=0.182 Sum_probs=80.4
Q ss_pred CCCCeeeccccccc-cccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEE
Q 004732 41 TFLQDISLIANRLK-GPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFR 119 (733)
Q Consensus 41 ~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 119 (733)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666666 55666666666666666666666643 5566666666666666666655666666666666666
Q ss_pred eeCCccccC-CCccccccCCCCEEEccCCCCccCCC---CCCCCcCCcCeeecc
Q 004732 120 ISDNQFTGQ-IPSFIQNWTKLEKLFIQPSGLAGPIP---SGIFSLENLTDLRIS 169 (733)
Q Consensus 120 l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~L~l~ 169 (733)
+++|++++. .+..++.+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 23556666666666666666664433 355566666666654
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=5.9e-16 Score=149.94 Aligned_cols=127 Identities=20% Similarity=0.254 Sum_probs=107.8
Q ss_pred CeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCC
Q 004732 44 QDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDN 123 (733)
Q Consensus 44 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (733)
+.+++++|.|+ .+|..+. ++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 67899999998 6776554 68999999999998 78888999999999999999999877888999999999999999
Q ss_pred ccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCC
Q 004732 124 QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGP 174 (733)
Q Consensus 124 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 174 (733)
+|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 999888888999999999999999998655566777888887777766543
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=2.8e-17 Score=173.59 Aligned_cols=137 Identities=12% Similarity=0.149 Sum_probs=99.6
Q ss_pred CccccCcccCCCcccEEEcccCCCcEEEEEEccccCh--------------hcHHH--------HHHHHHHHHhCCCCce
Q 004732 394 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK--------------QGNRE--------FINEIGMISALQHPNL 451 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~ni 451 (733)
-|.+.+.||+|+||.||+|...+|+.||||+++.... ..... ..+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999988999999998753200 00111 2346666777654443
Q ss_pred eeEeeEEEeCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCC
Q 004732 452 VKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 531 (733)
Q Consensus 452 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 531 (733)
.-..-+... ..++||||++|++|.++. .......++.|++.+|.|||+.| ||||||||.|||+++++.
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 211111111 237999999998886542 22345678899999999999987 999999999999988763
Q ss_pred ----------eEEcccCcccc
Q 004732 532 ----------SKISDFGLAKL 542 (733)
Q Consensus 532 ----------~kl~DfGla~~ 542 (733)
+.|+||+-+..
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEE
T ss_pred cccccccccceEEEEeCCccc
Confidence 89999998763
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.6e-16 Score=147.20 Aligned_cols=129 Identities=22% Similarity=0.190 Sum_probs=117.1
Q ss_pred cceeeeecccccccc-ccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCcee
Q 004732 16 KTVNQKRVLKEQNLT-GVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 94 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 94 (733)
.+.++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356889999999999 88999999999999999999999966 789999999999999999997788888889999999
Q ss_pred eccCcccccc-CCccccCCCCCCEEEeeCCccccCCC---ccccccCCCCEEEccC
Q 004732 95 HLSSNNFTGE-LPKTFAKLTNMKDFRISDNQFTGQIP---SFIQNWTKLEKLFIQP 146 (733)
Q Consensus 95 ~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~~ 146 (733)
+|++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999963 34889999999999999999997666 5899999999999864
No 381
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.64 E-value=1.3e-17 Score=191.06 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=55.3
Q ss_pred CCCCCCeeeccccccccccchhccCC--CCCCEEEccccc-ccc-cCCccccCCcCCceeeccCcccccc----CCcccc
Q 004732 39 ELTFLQDISLIANRLKGPIPKYLANI--STLVNLTVQYNQ-FSG-ELPEELGSLLNLEKLHLSSNNFTGE----LPKTFA 110 (733)
Q Consensus 39 ~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~ 110 (733)
.+++|++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 34455555555555444444444332 225555554443 110 1111122444555555555544433 222233
Q ss_pred CCCCCCEEEeeCCccc----cCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecc
Q 004732 111 KLTNMKDFRISDNQFT----GQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRIS 169 (733)
Q Consensus 111 ~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 169 (733)
.+++|++|++++|.++ +.++..+.++++|+.|++++|.+.+ ++..+..+++|+.|+++
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 4445555555555544 1222333444555555555554442 33444444444444444
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1e-15 Score=146.24 Aligned_cols=131 Identities=19% Similarity=0.282 Sum_probs=97.3
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.+.+++++|+++. +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3556777777773 444333 6788888888888866666678888888888888888865556677888888888888
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccC
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGP 152 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 152 (733)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 888866666677788888888888888865555667788888888888877643
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3.7e-15 Score=142.25 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=105.4
Q ss_pred CCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeC
Q 004732 43 LQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISD 122 (733)
Q Consensus 43 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 122 (733)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 578899999998 5665443 6899999999999966666788999999999999999966667788899999999999
Q ss_pred CccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCC
Q 004732 123 NQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 123 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 99997777778889999999999999986555556777777777776665543
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=1.2e-17 Score=162.87 Aligned_cols=151 Identities=23% Similarity=0.323 Sum_probs=130.6
Q ss_pred eecccceeeeeccccccccccCCc------cccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccc
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVLPP------KLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEEL 85 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 85 (733)
.|........++|+.+++++.+|. .|..+++|++|+|++|.|++ +| .+.++++|++|+|++|.++ .+|..+
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 466667778889999999999887 89999999999999999996 66 8999999999999999999 788888
Q ss_pred cCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCC-ccccccCCCCEEEccCCCCccCCCCC--------
Q 004732 86 GSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIP-SFIQNWTKLEKLFIQPSGLAGPIPSG-------- 156 (733)
Q Consensus 86 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~-------- 156 (733)
..+++|+.|+|++|+|++ +| .+..+++|++|+|++|+|++..+ ..+..+++|+.|++++|.+.+..|..
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 888999999999999995 55 68889999999999999985332 47889999999999999998776653
Q ss_pred --CCCcCCcCeee
Q 004732 157 --IFSLENLTDLR 167 (733)
Q Consensus 157 --l~~l~~L~~L~ 167 (733)
+..+++|+.|+
T Consensus 168 ~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 168 EVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHCSSCSEEC
T ss_pred HHHHhCCCcEEEC
Confidence 67788888776
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=2.3e-15 Score=158.98 Aligned_cols=88 Identities=13% Similarity=-0.004 Sum_probs=51.1
Q ss_pred cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCC-EEEecCCcccccCChhh--hcCCCeeec
Q 004732 185 KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVD-YIYFAGNLLTGAIPPWM--LERGDKIDL 261 (733)
Q Consensus 185 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~--l~~l~~l~l 261 (733)
+|+.|+|++|+++...+..|.++.+|+.|+|.+| ++...+.+|.++.+|+ .+++.+ .++..-+..+ ..+|+.+++
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 5666666666666555556666666666666666 5545555666666666 666665 4443333333 455666666
Q ss_pred ccCcCCCCCCccc
Q 004732 262 SYNNFTDGSAESS 274 (733)
Q Consensus 262 s~N~l~~~~~~~~ 274 (733)
++|+++......+
T Consensus 305 ~~n~i~~I~~~aF 317 (329)
T 3sb4_A 305 TGDKITTLGDELF 317 (329)
T ss_dssp CSSCCCEECTTTT
T ss_pred CCCccCccchhhh
Confidence 6666654444333
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=4.5e-15 Score=156.75 Aligned_cols=214 Identities=10% Similarity=-0.009 Sum_probs=125.4
Q ss_pred cceeeeecccccccc--ccCCccccCCCCCCeeeccccccccccchhccC--------CCCCCEEEcccccccccCCccc
Q 004732 16 KTVNQKRVLKEQNLT--GVLPPKLAELTFLQDISLIANRLKGPIPKYLAN--------ISTLVNLTVQYNQFSGELPEEL 85 (733)
Q Consensus 16 ~~~~~~l~L~~n~l~--~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~ 85 (733)
.+.++.|+|++|+|. ......+ +.++.+.+..|.|. ...|.+ +++|+.|+|.+ .++.+-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 455888999999988 3222222 22344444444332 344555 67777777766 6664555567
Q ss_pred cCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCcc----ccCCCcccc---------------------------
Q 004732 86 GSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQF----TGQIPSFIQ--------------------------- 134 (733)
Q Consensus 86 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l----~~~~~~~~~--------------------------- 134 (733)
.+|++|+.|+|++|.++...+..|.++.++..+.+..+.. .......|.
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 7777777777777766655556666655555554443221 000111111
Q ss_pred -----------------------ccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-ccc-EE
Q 004732 135 -----------------------NWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMT-KL 189 (733)
Q Consensus 135 -----------------------~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~-~L 189 (733)
.+++|+.|+|++|+++...+.+|.++.+|+.|++.+| +..+....|.++ +|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 2566777777766666544556666667777776665 555555555555 466 66
Q ss_pred EcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEE
Q 004732 190 ILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIY 238 (733)
Q Consensus 190 ~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 238 (733)
++.+ .++...+.+|.++++|+.|++++|+++...+..|.++++|+.++
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 6666 55555556666666777777666666655556666666666665
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=2.2e-15 Score=143.71 Aligned_cols=132 Identities=11% Similarity=0.142 Sum_probs=86.4
Q ss_pred cccCCCCCCeeeccccccccccchhccCCC-CCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCC
Q 004732 36 KLAELTFLQDISLIANRLKGPIPKYLANIS-TLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTN 114 (733)
Q Consensus 36 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 114 (733)
.+..+.+|+.|+|++|+++ .++. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4556667777777777777 3343 44444 777777777777743 56777777777777777777444444567777
Q ss_pred CCEEEeeCCccccCCCc--cccccCCCCEEEccCCCCccCCCCC----CCCcCCcCeeecccccC
Q 004732 115 MKDFRISDNQFTGQIPS--FIQNWTKLEKLFIQPSGLAGPIPSG----IFSLENLTDLRISDLNG 173 (733)
Q Consensus 115 L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~----l~~l~~L~~L~l~~n~~ 173 (733)
|++|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 777777777775 4554 6667777777777777776 44543 66666666666666543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=5.5e-17 Score=158.10 Aligned_cols=109 Identities=20% Similarity=0.282 Sum_probs=59.8
Q ss_pred ccCCCCCCeeeccccccccccch------hccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCcccc
Q 004732 37 LAELTFLQDISLIANRLKGPIPK------YLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFA 110 (733)
Q Consensus 37 l~~l~~L~~L~L~~n~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 110 (733)
+.....++.++++.|.++|..|. .|..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445666666666666665554 55566666666666666653 44 5555556666666666555 4555555
Q ss_pred CCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc
Q 004732 111 KLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 111 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 150 (733)
.+++|++|+|++|+|++ +| .+..+++|+.|+|++|+++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 55555555555555553 22 3444444444444444443
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.6e-15 Score=142.23 Aligned_cols=132 Identities=18% Similarity=0.192 Sum_probs=114.8
Q ss_pred ecccceeeeeccccccccccCCccccCCC-CCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCC
Q 004732 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELT-FLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNL 91 (733)
Q Consensus 13 ~~~~~~~~~l~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 91 (733)
+.+...++.|+|++|+++.. |. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|.|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45567789999999999954 54 55555 999999999999965 679999999999999999996544556999999
Q ss_pred ceeeccCccccccCCc--cccCCCCCCEEEeeCCccccCCCcc----ccccCCCCEEEccCCCCc
Q 004732 92 EKLHLSSNNFTGELPK--TFAKLTNMKDFRISDNQFTGQIPSF----IQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~ 150 (733)
++|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999997 6776 8999999999999999999 56764 899999999999999876
No 390
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.52 E-value=2.3e-16 Score=180.78 Aligned_cols=249 Identities=14% Similarity=0.064 Sum_probs=123.0
Q ss_pred ccceeeeecccccc--ccc-cCCccccCCCCCCeeecccc-ccccccchhccCCCCCCEEEccccc--------------
Q 004732 15 QKTVNQKRVLKEQN--LTG-VLPPKLAELTFLQDISLIAN-RLKGPIPKYLANISTLVNLTVQYNQ-------------- 76 (733)
Q Consensus 15 ~~~~~~~l~L~~n~--l~~-~~p~~l~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~N~-------------- 76 (733)
..+.++.|+|++|+ ++. .++..+..+++|++|+|++| .+++ ++..+.++++|+.|+++.+.
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 45578888888886 221 11222344688888888888 4443 66666666777777644331
Q ss_pred ------------cc----ccCCccccCCcCCceeeccCccccccCC-ccccCCCCCCEEEeeCCcccc-CCCccccccCC
Q 004732 77 ------------FS----GELPEELGSLLNLEKLHLSSNNFTGELP-KTFAKLTNMKDFRISDNQFTG-QIPSFIQNWTK 138 (733)
Q Consensus 77 ------------l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~ 138 (733)
+. +.++..+..+++|+.|+|++|.+++... ..+..+++|+.|++++| ++. .++.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 11 1223333356778888888877664332 22456777777777777 332 12222334666
Q ss_pred CCEEEcc---------CCCCccCCCCCCC-CcCCcCeeecccccCCCCCccccc--cccccEEEcc--c----CccCCCC
Q 004732 139 LEKLFIQ---------PSGLAGPIPSGIF-SLENLTDLRISDLNGPEATFPQLG--NMKMTKLILR--N----CNITGEL 200 (733)
Q Consensus 139 L~~L~l~---------~N~l~~~~p~~l~-~l~~L~~L~l~~n~~~~~~~~~~~--~~~L~~L~l~--~----n~l~~~~ 200 (733)
|+.|++. .|.+++.....+. .+++|+.|.++.|.++......+. ..+|+.|+++ + |.++...
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 6666662 2334322211222 245555555555555443333222 1245555555 2 3333111
Q ss_pred -----CccccCCCCCcEEEccCCcccCCCCCCcCC-CCCCCEEEecCCcccccCChhh---hcCCCeeecccCcC
Q 004732 201 -----PRYLGKMTKLKVLDLSFNRLRGQIPSNFDD-LYDVDYIYFAGNLLTGAIPPWM---LERGDKIDLSYNNF 266 (733)
Q Consensus 201 -----p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~---l~~l~~l~ls~N~l 266 (733)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..+ +++|+.|++++|++
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 11133444555555544 333332222322 4445555555554433322222 34445555555544
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=2.7e-13 Score=146.42 Aligned_cols=239 Identities=11% Similarity=0.055 Sum_probs=164.7
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
+..+.+.. +++.+-..+|.+. +|+.+.|.+| ++.+...+|.+ .+|+.+.|.+ .++.+-+.+|.++.+|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 44445543 5666666677764 6888888766 66566667777 4688888875 66656667788888888888888
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATF 178 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~ 178 (733)
|+++......|. .++|+.+.|.+| ++......|.++++|+.+.|..| ++..-..+|.+ .+|+.+.+. +++..+..
T Consensus 190 n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~ 264 (401)
T 4fdw_A 190 TKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIAS 264 (401)
T ss_dssp SCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECT
T ss_pred CcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEECh
Confidence 888844444454 578888888744 66556677888888888888764 55344555655 778888883 45666666
Q ss_pred cccccc-cccEEEcccCccC-----CCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh
Q 004732 179 PQLGNM-KMTKLILRNCNIT-----GELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM 252 (733)
Q Consensus 179 ~~~~~~-~L~~L~l~~n~l~-----~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 252 (733)
..|..+ +|+.+.+.+|.+. ...+..|.++++|+.++|. |.++......|.+|.+|+.+.+..| +...-+..+
T Consensus 265 ~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 265 RAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp TTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSS
T ss_pred hHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhC
Confidence 666665 7888888777665 3556678888888888888 4477666677888888888888655 442333333
Q ss_pred --hcCCCeeecccCcCCCCC
Q 004732 253 --LERGDKIDLSYNNFTDGS 270 (733)
Q Consensus 253 --l~~l~~l~ls~N~l~~~~ 270 (733)
. +|+.+++.+|.+....
T Consensus 343 ~~~-~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp SSS-CCCEEEECCSSCCBCC
T ss_pred CCC-CCCEEEEcCCCCcccc
Confidence 3 6788888887765443
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.50 E-value=1.3e-15 Score=174.48 Aligned_cols=159 Identities=11% Similarity=0.157 Sum_probs=112.3
Q ss_pred ccCCCCCCEEEeeCCccccCC-CccccccCCCCEEEccCCCCccCCCCC-CCCcCCcCeeeccc---------ccCCCCC
Q 004732 109 FAKLTNMKDFRISDNQFTGQI-PSFIQNWTKLEKLFIQPSGLAGPIPSG-IFSLENLTDLRISD---------LNGPEAT 177 (733)
Q Consensus 109 ~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~L~l~~---------n~~~~~~ 177 (733)
+..+++|+.|+|++|.+++.. ...+.++++|+.|++++| +....... ...+++|+.|++++ +.++...
T Consensus 285 ~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 285 YSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred HHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 346789999999999977543 334668999999999998 54322222 23478999999944 3343333
Q ss_pred ccccc--cccccEEEcccCccCCCCCcccc-CCCCCcEEEcc--C----CcccCCC-----CCCcCCCCCCCEEEecCCc
Q 004732 178 FPQLG--NMKMTKLILRNCNITGELPRYLG-KMTKLKVLDLS--F----NRLRGQI-----PSNFDDLYDVDYIYFAGNL 243 (733)
Q Consensus 178 ~~~~~--~~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~ls--~----N~l~~~~-----p~~~~~l~~L~~L~l~~N~ 243 (733)
...+. ..+|+.|.+..|.+++.....+. .+++|+.|+|+ + |.+++.. +..+..+++|+.|++++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 22222 34799999999999877666665 58999999999 4 5565221 12256789999999987 6
Q ss_pred ccccCChhh---hcCCCeeecccCcCCCC
Q 004732 244 LTGAIPPWM---LERGDKIDLSYNNFTDG 269 (733)
Q Consensus 244 l~~~~p~~~---l~~l~~l~ls~N~l~~~ 269 (733)
+++..+..+ +++|+.|++++|.+++.
T Consensus 443 l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 443 LTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred ccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 665544444 67899999999998653
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.49 E-value=3.8e-13 Score=145.30 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=187.8
Q ss_pred eecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCC
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNL 91 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 91 (733)
.|.++ .++.+.|..+ ++.+-..+|.+ .+|+.+.|.+ .++.+-...|.++++|+.++|++|+++.+...+|. +.+|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 34443 5777888765 88777778888 4799999986 77767778899999999999999999954445565 6899
Q ss_pred ceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccc
Q 004732 92 EKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDL 171 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n 171 (733)
+.+.|.+| ++.....+|.++++|+.+++.+| ++..-...|.+ .+|+.+.| .|.++.....+|.++++|+.+++.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 99999855 77677788999999999999875 56455677777 78999999 56677566788999999999999887
Q ss_pred cCC-----CCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCccc
Q 004732 172 NGP-----EATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT 245 (733)
Q Consensus 172 ~~~-----~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 245 (733)
.+. .+....|..+ +|+.+.|. +.++.....+|.++++|+.|+|..| ++......|.++ +|+.|++.+|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 765 3455556655 89999999 4587777888999999999999655 776777899999 9999999999876
Q ss_pred ccCChhh---hcCCCeeecccCc
Q 004732 246 GAIPPWM---LERGDKIDLSYNN 265 (733)
Q Consensus 246 ~~~p~~~---l~~l~~l~ls~N~ 265 (733)
...+..+ ...+..|.+..+.
T Consensus 359 ~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 359 QVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp BCCCSSCCCSCTTCCEEEECGGG
T ss_pred ccccccccCCCCCccEEEeCHHH
Confidence 4333333 2345667666554
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=7e-14 Score=132.35 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=45.6
Q ss_pred eeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCc
Q 004732 20 QKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSN 99 (733)
Q Consensus 20 ~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 99 (733)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 344455554442 333332 44444444444444444444444444444444444444333333444444444444444
Q ss_pred cccccCCccccCCCCCCEEEeeCCccc
Q 004732 100 NFTGELPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
+|++..+..|..+++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 444333333444444444444444443
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=8.8e-14 Score=131.65 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=97.7
Q ss_pred CCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEee
Q 004732 42 FLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRIS 121 (733)
Q Consensus 42 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 121 (733)
..+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 6776664 899999999999998888999999999999999999997777778999999999999
Q ss_pred CCccccCCCccccccCCCCEEEccCCCCcc
Q 004732 122 DNQFTGQIPSFIQNWTKLEKLFIQPSGLAG 151 (733)
Q Consensus 122 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 151 (733)
+|+|++..+..|.++++|+.|+|++|.+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 999998777789999999999999999984
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.1e-13 Score=131.38 Aligned_cols=103 Identities=21% Similarity=0.309 Sum_probs=46.6
Q ss_pred eeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCc
Q 004732 45 DISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ 124 (733)
Q Consensus 45 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (733)
.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4444444443 3333332 444444444444444444444444444444444444443333334444445555555554
Q ss_pred cccCCCccccccCCCCEEEccCCCCc
Q 004732 125 FTGQIPSFIQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 125 l~~~~~~~~~~l~~L~~L~l~~N~l~ 150 (733)
|++..+..|..+++|+.|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 44333333444444555555544444
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.5e-13 Score=130.62 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=95.2
Q ss_pred eeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 19 NQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 19 ~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
...+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 467889999997 6777665 8999999999999988899999999999999999999976566689999999999999
Q ss_pred ccccccCCccccCCCCCCEEEeeCCcccc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFTG 127 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 127 (733)
|+|++..+..|..+++|+.|+|++|.|..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99996666679999999999999999984
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=2.4e-14 Score=153.16 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=92.1
Q ss_pred CCCCeeeccccccccccchhccCC-----CCCCEEEcccccccccCCccc-cCCcCCceeeccCccccccCCcccc----
Q 004732 41 TFLQDISLIANRLKGPIPKYLANI-----STLVNLTVQYNQFSGELPEEL-GSLLNLEKLHLSSNNFTGELPKTFA---- 110 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~---- 110 (733)
++|+.|+|++|.|+......|..+ ++|++|+|++|.++......+ ..+++|+.|+|++|.|+......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 455666666666654333333222 456666666666543222222 2344566666666666543333331
Q ss_pred -CCCCCCEEEeeCCccccC----CCccccccCCCCEEEccCCCCccC----CCCCCCCcCCcCeeecccccCCCCCcccc
Q 004732 111 -KLTNMKDFRISDNQFTGQ----IPSFIQNWTKLEKLFIQPSGLAGP----IPSGIFSLENLTDLRISDLNGPEATFPQL 181 (733)
Q Consensus 111 -~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p~~l~~l~~L~~L~l~~n~~~~~~~~~~ 181 (733)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~-------------------- 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR-------------------- 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS--------------------
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC--------------------
Confidence 245566666666665431 223334455555566655555421 122222223
Q ss_pred ccccccEEEcccCccCCC----CCccccCCCCCcEEEccCCcccCCCCCCcCCCC-----CCCEEE--ecCCccc
Q 004732 182 GNMKMTKLILRNCNITGE----LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY-----DVDYIY--FAGNLLT 245 (733)
Q Consensus 182 ~~~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-----~L~~L~--l~~N~l~ 245 (733)
+|+.|+|++|.|+.. ++..+...++|++|||++|.|+......+..+. .|+.+. +..|.+.
T Consensus 212 ---~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 212 ---QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp ---CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred ---CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 466666666766642 334455668888888888888765444443332 155665 5556554
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=3.4e-12 Score=135.64 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=68.5
Q ss_pred eeccccc-cccccCCccccCCCCCCeeeccc-cccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 21 KRVLKEQ-NLTGVLPPKLAELTFLQDISLIA-NRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 21 ~l~L~~n-~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.++++++ +|++ +|. |..+++|+.|+|++ |+|++..+..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4556665 6663 555 77777777777774 777766666677777777777777777766666677777777777777
Q ss_pred ccccccCCccccCCCCCCEEEeeCCccc
Q 004732 99 NNFTGELPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 99 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
|+|++..+..|..++ |+.|+|.+|.|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777744444454444 777777777666
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=9.3e-12 Score=126.63 Aligned_cols=144 Identities=15% Similarity=0.102 Sum_probs=113.0
Q ss_pred hhcCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEE
Q 004732 391 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 391 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 469 (733)
....|.....++.|+.+.||++... ++.+++|............+.+|+++++.+. |..+.++++++.+.+..++|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 3456777788898999999999754 6889999986432122346889999999985 6677889999999999999999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC----------------------------------------
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE---------------------------------------- 509 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------- 509 (733)
|++|.+|.+.+. +......++.+++++|+.||+.
T Consensus 91 ~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 91 EADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred ecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 999999987531 1233457889999999999981
Q ss_pred ----------------CCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 510 ----------------SRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 510 ----------------~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
.+..++|+|++|.||+++++..+.|+||+.+.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11348999999999999876556799999775
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4.6e-12 Score=134.61 Aligned_cols=105 Identities=15% Similarity=0.201 Sum_probs=95.4
Q ss_pred Ceeecccc-ccccccchhccCCCCCCEEEccc-ccccccCCccccCCcCCceeeccCccccccCCccccCCCCCCEEEee
Q 004732 44 QDISLIAN-RLKGPIPKYLANISTLVNLTVQY-NQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRIS 121 (733)
Q Consensus 44 ~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 121 (733)
..++++++ +|+ .+|. |..+++|++|+|++ |.|++..+..|+.|++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45789998 899 5888 99999999999996 99998777899999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccCCCCEEEccCCCCcc
Q 004732 122 DNQFTGQIPSFIQNWTKLEKLFIQPSGLAG 151 (733)
Q Consensus 122 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 151 (733)
+|+|++..+..|..++ |+.|+|.+|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999976667777666 9999999999983
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=3.4e-14 Score=151.98 Aligned_cols=159 Identities=16% Similarity=0.151 Sum_probs=118.5
Q ss_pred ceeeeeccccccccccCCccccCC-----CCCCeeeccccccccccchhcc-CCCCCCEEEcccccccccCCccc-----
Q 004732 17 TVNQKRVLKEQNLTGVLPPKLAEL-----TFLQDISLIANRLKGPIPKYLA-NISTLVNLTVQYNQFSGELPEEL----- 85 (733)
Q Consensus 17 ~~~~~l~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~----- 85 (733)
..++.++|++|+|+......|..+ ++|+.|+|++|.|+......+. .+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 457889999999987544444443 7999999999999865444443 46789999999999985544444
Q ss_pred cCCcCCceeeccCccccc----cCCccccCCCCCCEEEeeCCccccC----CCccccccCCCCEEEccCCCCccC----C
Q 004732 86 GSLLNLEKLHLSSNNFTG----ELPKTFAKLTNMKDFRISDNQFTGQ----IPSFIQNWTKLEKLFIQPSGLAGP----I 153 (733)
Q Consensus 86 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~ 153 (733)
...++|++|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 346789999999999975 3455567899999999999999853 356677889999999999999853 2
Q ss_pred CCCCCCcCCcCeeecccccCCC
Q 004732 154 PSGIFSLENLTDLRISDLNGPE 175 (733)
Q Consensus 154 p~~l~~l~~L~~L~l~~n~~~~ 175 (733)
+..+...++|+.|+|++|.+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 3333345566666665555443
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=1.5e-11 Score=124.77 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=102.0
Q ss_pred cCccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce--eeEeeEEEeCCeEEEEEEc
Q 004732 393 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL--VKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 393 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~~~~lV~e~ 470 (733)
.++....+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.++ .++++++..++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 344443344466679999998777888999997543 22457889999999865454 4588888888889999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC----------------------------------------
Q 004732 471 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES---------------------------------------- 510 (733)
Q Consensus 471 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 510 (733)
++|.++. .. .. ....++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~----~~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SS----HL---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TS----CC---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cC----cC---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 11 11 13367788888888888742
Q ss_pred ---------------CCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 511 ---------------RIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 511 ---------------~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
+..++|+|++|.||+++.+..+.|+|||.+.
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1228999999999999877666799999875
No 404
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.02 E-value=2.7e-10 Score=118.47 Aligned_cols=185 Identities=17% Similarity=0.200 Sum_probs=123.2
Q ss_pred cCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCce--eeEeeEEEeCC---eEEEEEEcc
Q 004732 398 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNL--VKLYGCCIEGN---QLLLIYEYL 471 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~~---~~~lV~e~~ 471 (733)
.+.++.|....||+.. ..+++|..... .....+.+|+++++.+. +..+ .+++.....+. ..|+||+|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999875 45889886432 34567889999998884 3332 33444433332 348899999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC------------------------------------------
Q 004732 472 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE------------------------------------------ 509 (733)
Q Consensus 472 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 509 (733)
+|.++.+... ..++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9998875432 2467778888899999999999861
Q ss_pred -------------CCCCeecCCCCCCcEEecC--CCCeEEcccCccccCcccCcccccc--------------cccCCCc
Q 004732 510 -------------SRIKVVHRDIKATNVLLDK--DLNSKISDFGLAKLDEEENTHISTR--------------VAGTIGY 560 (733)
Q Consensus 510 -------------~~~~ivH~Dik~~Nill~~--~~~~kl~DfGla~~~~~~~~~~~~~--------------~~gt~~y 560 (733)
..+.++|+|++|.||+++. ...+.|+||+.+....... ..... +...++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1234799999999999998 4557899999987533211 11000 0001111
Q ss_pred cc-HHHHhhCCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 561 MA-PEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 561 ~a-PE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
.. |+..... ....+.|+++.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 22 2222111 12358999999999999998776
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=6.4e-10 Score=118.56 Aligned_cols=143 Identities=17% Similarity=0.257 Sum_probs=107.1
Q ss_pred ccCcccCCCcccEEEcccCCCcEEEEEEcc--ccC-hhcHHHHHHHHHHHHhCCC--CceeeEeeEEEeC---CeEEEEE
Q 004732 397 TDNNIGEGGFGPVYKGLLADGTAIAVKQLS--SKS-KQGNREFINEIGMISALQH--PNLVKLYGCCIEG---NQLLLIY 468 (733)
Q Consensus 397 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lV~ 468 (733)
..+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+.+ ..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999988764 678888765 321 1223567889999999974 4577888888776 4579999
Q ss_pred EccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--------------------------------------
Q 004732 469 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES-------------------------------------- 510 (733)
Q Consensus 469 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 510 (733)
||++|..+.+. ....++...+..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99999877431 1234678889999999999999999731
Q ss_pred -----------------CCCeecCCCCCCcEEecCCCC--eEEcccCccccC
Q 004732 511 -----------------RIKVVHRDIKATNVLLDKDLN--SKISDFGLAKLD 543 (733)
Q Consensus 511 -----------------~~~ivH~Dik~~Nill~~~~~--~kl~DfGla~~~ 543 (733)
+..++|||+++.||+++.++. +.|.||+.+...
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246899999999999997753 689999998753
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.94 E-value=5.8e-09 Score=112.64 Aligned_cols=60 Identities=8% Similarity=-0.061 Sum_probs=33.0
Q ss_pred cccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccC
Q 004732 203 YLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYN 264 (733)
Q Consensus 203 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N 264 (733)
.|..+.+|+.+.+..+ ++......|.++.+|+.+++.++ ++..-..++ ..+|+.+++..|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 4556666777766544 44444556666777777766543 332222333 345666666544
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=1.7e-10 Score=122.35 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=107.4
Q ss_pred CCCCeeecccccccc-c-------cchhccCCCCCCEEEccccccc---------ccCCccccCCcCCceeeccCccccc
Q 004732 41 TFLQDISLIANRLKG-P-------IPKYLANISTLVNLTVQYNQFS---------GELPEELGSLLNLEKLHLSSNNFTG 103 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~-~-------~p~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~ 103 (733)
..++.|.+......+ . +..++.++++|+.|.+.++... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 346677776555432 1 2334556778888877654321 112333455566666666655211
Q ss_pred cCCccccCCCCCCEEEeeCCccccCCCcccc--ccCCCCEEEccC--CCCccCCCCCCCCcCCcCeeecccccCCCCCcc
Q 004732 104 ELPKTFAKLTNMKDFRISDNQFTGQIPSFIQ--NWTKLEKLFIQP--SGLAGPIPSGIFSLENLTDLRISDLNGPEATFP 179 (733)
Q Consensus 104 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~--N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 179 (733)
.++. +. +++|+.|+|..|.+.......++ .+++|+.|+|+. |...+.. .+ ..|.. ...
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~---~~l~~-----------~l~ 247 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DM---NVFRP-----------LFS 247 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CG---GGTGG-----------GSC
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hH---HHHHH-----------HHh
Confidence 1222 22 55666666666655433222332 456666665542 1111100 00 00000 000
Q ss_pred ccccccccEEEcccCccCCCCCcccc---CCCCCcEEEccCCcccCC----CCCCcCCCCCCCEEEecCCcccccCChhh
Q 004732 180 QLGNMKMTKLILRNCNITGELPRYLG---KMTKLKVLDLSFNRLRGQ----IPSNFDDLYDVDYIYFAGNLLTGAIPPWM 252 (733)
Q Consensus 180 ~~~~~~L~~L~l~~n~l~~~~p~~~~---~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 252 (733)
.....+|+.|+|.+|.+....+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|++++|.++...-..+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 01123677777777777644333333 477888888888888764 33344556888888888888764433333
Q ss_pred hc-CCCeeecccCc
Q 004732 253 LE-RGDKIDLSYNN 265 (733)
Q Consensus 253 l~-~l~~l~ls~N~ 265 (733)
.. ....++++.|+
T Consensus 328 ~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCCSEEECCSBC
T ss_pred HHHcCCEEEecCCc
Confidence 22 23567777765
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=2.6e-10 Score=120.88 Aligned_cols=181 Identities=13% Similarity=0.182 Sum_probs=112.2
Q ss_pred ccccCCCCCCeeeccccccc---------cccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccC
Q 004732 35 PKLAELTFLQDISLIANRLK---------GPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGEL 105 (733)
Q Consensus 35 ~~l~~l~~L~~L~L~~n~l~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 105 (733)
.++..+++|+.|.|..+... +.+...+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 34667899999999765431 235566788899999999988311 2443 43 889999999999887555
Q ss_pred Ccccc--CCCCCCEEEeeC--CccccC-----CCccc--cccCCCCEEEccCCCCccCCCCCCC---CcCCcCeeecccc
Q 004732 106 PKTFA--KLTNMKDFRISD--NQFTGQ-----IPSFI--QNWTKLEKLFIQPSGLAGPIPSGIF---SLENLTDLRISDL 171 (733)
Q Consensus 106 p~~~~--~l~~L~~L~l~~--N~l~~~-----~~~~~--~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~L~~L~l~~n 171 (733)
...++ .+|+|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+....+..+. .++
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~---------- 279 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILP---------- 279 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGG----------
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCC----------
Confidence 55555 789999999964 332221 11122 2467788888877777643222222 233
Q ss_pred cCCCCCccccccccccEEEcccCccCCC----CCccccCCCCCcEEEccCCcccCCCCCCcCC-CCCCCEEEecCCc
Q 004732 172 NGPEATFPQLGNMKMTKLILRNCNITGE----LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDD-LYDVDYIYFAGNL 243 (733)
Q Consensus 172 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~ 243 (733)
+|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+++++|.
T Consensus 280 -------------~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 280 -------------QLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp -------------GCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred -------------CCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 455566666666543 2333345677777777777776443333332 2 3456777665
No 409
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.82 E-value=2.8e-08 Score=107.27 Aligned_cols=227 Identities=18% Similarity=0.124 Sum_probs=153.9
Q ss_pred ccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccCccccccCC
Q 004732 27 QNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELP 106 (733)
Q Consensus 27 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 106 (733)
+++..+-..+|..+++|+.+.|.++..+ +....|.++.+|+.+++..| ++.+...+|.++..|+.+.+..+... +.
T Consensus 148 ~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~ 223 (394)
T 4fs7_A 148 EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LG 223 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--EC
T ss_pred ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--ee
Confidence 3444455668899999999999866443 66678999999999999877 55466678999999999998877544 34
Q ss_pred ccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccccc
Q 004732 107 KTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKM 186 (733)
Q Consensus 107 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L 186 (733)
+......+|+.+.+..+. +......|.++..|+.+.+..+... .....|..+..|+.+.+..+.+....+ ....+|
T Consensus 224 ~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F--~~~~~L 299 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTF--YGCSSL 299 (394)
T ss_dssp TTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTT--TTCTTC
T ss_pred hhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccc--cccccc
Confidence 444556788888886543 3344567778888888888776554 455667777777777766544333222 122367
Q ss_pred cEEEcccCccCCCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccC
Q 004732 187 TKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYN 264 (733)
Q Consensus 187 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N 264 (733)
+.+.+.++ ++.....+|.++.+|+.++|..+ ++.....+|.+|.+|+.+.+..| +...-..++ ..+|+.+++..+
T Consensus 300 ~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 300 TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77777654 55455667788888888888644 66555677888888888888766 442223333 356777776543
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.76 E-value=2.4e-07 Score=99.90 Aligned_cols=108 Identities=12% Similarity=0.120 Sum_probs=72.0
Q ss_pred eccc-ceeeeeccccccccccCCccccCCCCCCeeeccccc---cccccchhccCCCCCCEEEcccccccccCCccccCC
Q 004732 13 WKQK-TVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANR---LKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSL 88 (733)
Q Consensus 13 ~~~~-~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 88 (733)
|.++ ..++++.|.. +++.+-..+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+.++ ++.+...+|..+
T Consensus 59 F~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred ccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 4443 3467777765 5777777788888899998888764 66455667777788887777655 443555667777
Q ss_pred cCCceeeccCccccccCCccccCCCCCCEEEeeCC
Q 004732 89 LNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDN 123 (733)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (733)
.+|+.+.+..+. +......|..+.+|+.+.+.++
T Consensus 137 ~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~ 170 (394)
T 4gt6_A 137 EELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS 170 (394)
T ss_dssp TTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccccee-eeecccceecccccccccccce
Confidence 777777776443 3244455666666666666543
No 411
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=1e-07 Score=99.56 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=120.0
Q ss_pred CccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCC---Cc-eeeEeeEEEeCCeEEEEEE
Q 004732 394 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQH---PN-LVKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~n-iv~l~~~~~~~~~~~lV~e 469 (733)
.....+.++.|....||+. |+.+++|.... ......+.+|.++++.+.+ +. +.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 3445668899999999987 67788997643 2223568899999998876 22 2344443 45689999
Q ss_pred ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCC--------------------------------------
Q 004732 470 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESR-------------------------------------- 511 (733)
Q Consensus 470 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-------------------------------------- 511 (733)
|++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998874332 245677778888888888888885421
Q ss_pred ----------------------CCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhh-
Q 004732 512 ----------------------IKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR- 568 (733)
Q Consensus 512 ----------------------~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~- 568 (733)
+.++|+|++|.||+++.+..+.|+||+.+....+.... ............||....
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~ 263 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDF-LCLLDCSTDDFGKEFGRKV 263 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGG-HHHHSCCTTSCCHHHHHHH
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHH-HHHHHhcccccCHHHHHHH
Confidence 23599999999999998666799999998754332211 111111112234544321
Q ss_pred ---C-C-----CCccchhHhHHHHHHHHHhCC
Q 004732 569 ---G-H-----LTEKADVYSFGIVALEIVSGR 591 (733)
Q Consensus 569 ---~-~-----~~~~~Dv~s~Gvil~elltg~ 591 (733)
. . .....+.|..-..+.+++.|.
T Consensus 264 l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 295 (320)
T 3r70_A 264 LKYYQHKAPEVAERKAELNDVYWSIDQIIYGY 295 (320)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSC
T ss_pred HHHHhccCcHHHHHHHHHHHHHhHHHHHHHHH
Confidence 1 1 113556675445577777764
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.65 E-value=5.9e-07 Score=96.76 Aligned_cols=249 Identities=12% Similarity=0.087 Sum_probs=163.3
Q ss_pred ceeeeecccceeeeecccccc---ccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCcc
Q 004732 8 LVFHFWKQKTVNQKRVLKEQN---LTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEE 84 (733)
Q Consensus 8 ~~~~~~~~~~~~~~l~L~~n~---l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 84 (733)
+...-|.+++.++++.+..|. ++.+-..+|..+.+|+.+.+..+ ++.+....|.++.+|+.+.+..+.-. +....
T Consensus 78 Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~~~-I~~~~ 155 (394)
T 4gt6_A 78 IGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGVTS-VADGM 155 (394)
T ss_dssp ECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTCCE-ECTTT
T ss_pred EhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccceeee-ecccc
Confidence 334456778888889887764 66666778888999999888765 55466678899999999999765433 66677
Q ss_pred ccCCcCCceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCC----------------
Q 004732 85 LGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSG---------------- 148 (733)
Q Consensus 85 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~---------------- 148 (733)
|..+.+|+.+.+.++ ++......|.. .+|+.+.+..+-.. .....|.++..|.......+.
T Consensus 156 F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (394)
T 4gt6_A 156 FSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGD 232 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSC
T ss_pred eecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccccccceeeccccccc
Confidence 888889999988765 44244444543 56777777655433 444555556555555433221
Q ss_pred --------------------CccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCC
Q 004732 149 --------------------LAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKM 207 (733)
Q Consensus 149 --------------------l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l 207 (733)
+......+|.++.+|+.+.+.++. ..+....+.+. +|+.+.+. +.++......|.++
T Consensus 233 ~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c 310 (394)
T 4gt6_A 233 YALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGC 310 (394)
T ss_dssp EEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTC
T ss_pred ccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCC
Confidence 111223456677888888876533 33333344443 67888875 45655666778888
Q ss_pred CCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecccCc
Q 004732 208 TKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNN 265 (733)
Q Consensus 208 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~N~ 265 (733)
.+|+.++|..+ ++.....+|.+|.+|+.+.+..+ ++..-...+ ..+|+.+++.+|.
T Consensus 311 ~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 311 ISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 88888888754 55556678888888888888654 442223333 4567888877664
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.61 E-value=6e-09 Score=104.72 Aligned_cols=121 Identities=21% Similarity=0.210 Sum_probs=76.0
Q ss_pred eeeccccccccccch-hccCCCCCCE--EEccccccc---ccCCccccCCcCCceeeccCccccc--cCCccccCCCCCC
Q 004732 45 DISLIANRLKGPIPK-YLANISTLVN--LTVQYNQFS---GELPEELGSLLNLEKLHLSSNNFTG--ELPKTFAKLTNMK 116 (733)
Q Consensus 45 ~L~L~~n~l~~~~p~-~l~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~ 116 (733)
.|..++|..++.+.- .|...+.|+. ++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+
T Consensus 120 ~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~ 199 (267)
T 3rw6_A 120 IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 199 (267)
T ss_dssp HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCC
T ss_pred HHHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCC
Confidence 344555555544442 2555555555 666777433 2222223567778888888888876 4456667788888
Q ss_pred EEEeeCCccccCCCccccccC--CCCEEEccCCCCccCCCC-------CCCCcCCcCeee
Q 004732 117 DFRISDNQFTGQIPSFIQNWT--KLEKLFIQPSGLAGPIPS-------GIFSLENLTDLR 167 (733)
Q Consensus 117 ~L~l~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~p~-------~l~~l~~L~~L~ 167 (733)
.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 200 ~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 200 ILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 888888888754 3344444 788888888888766653 355677777776
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=1e-08 Score=97.93 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=78.6
Q ss_pred cCCccccCCCCCCeeecccc-ccccc----cchhccCCCCCCEEEccccccccc----CCccccCCcCCceeeccCcccc
Q 004732 32 VLPPKLAELTFLQDISLIAN-RLKGP----IPKYLANISTLVNLTVQYNQFSGE----LPEELGSLLNLEKLHLSSNNFT 102 (733)
Q Consensus 32 ~~p~~l~~l~~L~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 102 (733)
.+...+...+.|+.|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34445666778888888888 77642 345566677888888888887632 2334555567888888888877
Q ss_pred cc----CCccccCCCCCCEEEe--eCCccccC----CCccccccCCCCEEEccCCCCc
Q 004732 103 GE----LPKTFAKLTNMKDFRI--SDNQFTGQ----IPSFIQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 103 ~~----~p~~~~~l~~L~~L~l--~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 150 (733)
.. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3455666677888888 67777643 2334445577777777777764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=4.8e-09 Score=105.44 Aligned_cols=80 Identities=21% Similarity=0.390 Sum_probs=43.0
Q ss_pred cCCCCCCEEEcccccccc--cCCccccCCcCCceeeccCccccccCCccccCCC--CCCEEEeeCCccccCCCc------
Q 004732 62 ANISTLVNLTVQYNQFSG--ELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLT--NMKDFRISDNQFTGQIPS------ 131 (733)
Q Consensus 62 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~------ 131 (733)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 445566666666666654 3334455566666666666666533 2233333 566666666666554442
Q ss_pred -cccccCCCCEEE
Q 004732 132 -FIQNWTKLEKLF 143 (733)
Q Consensus 132 -~~~~l~~L~~L~ 143 (733)
.+..+++|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 245556665554
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.54 E-value=2.4e-07 Score=94.91 Aligned_cols=77 Identities=22% Similarity=0.204 Sum_probs=60.9
Q ss_pred cccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCC---ceeeEeeEEEeCCeEEEEEEccC
Q 004732 396 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHP---NLVKLYGCCIEGNQLLLIYEYLE 472 (733)
Q Consensus 396 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~~ 472 (733)
...+.|+.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345689999999999999888999999996543333346789999999999875 466777663 3589999999
Q ss_pred CCCH
Q 004732 473 NNSL 476 (733)
Q Consensus 473 ~gsL 476 (733)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 417
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.52 E-value=3e-07 Score=97.63 Aligned_cols=187 Identities=12% Similarity=0.086 Sum_probs=107.7
Q ss_pred cccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCc--eeeEeeEEEeC-CeEEEEEEccC
Q 004732 396 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN--LVKLYGCCIEG-NQLLLIYEYLE 472 (733)
Q Consensus 396 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~e~~~ 472 (733)
...+.++.|....+|+... +|+.+++|..... ..+.+|+.+++.+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456788999999998875 5788999987432 25888999999886544 44667776654 66899999999
Q ss_pred CCCHHH---------------H---HHhcC----CC------------CCHHHH---------------------HHHHH
Q 004732 473 NNSLAR---------------A---LFEHR----LK------------LDWPTR---------------------RRICL 497 (733)
Q Consensus 473 ~gsL~~---------------~---l~~~~----~~------------l~~~~~---------------------~~i~~ 497 (733)
|.++.+ . |+... .. -.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 865531 1 11110 00 001111 01111
Q ss_pred HHHHHHHHHHcC-CCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhh-----C--
Q 004732 498 GIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-----G-- 569 (733)
Q Consensus 498 ~ia~~l~~LH~~-~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~-- 569 (733)
.+...++++... ..+.++|+|+++.||+++.+..+.|+||+.+............ ....+.+..++.+.. .
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd~~~Dla~~-~~~~~~~~~~~~~~~~~~~~~~~ 276 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDSQYEVANI-FFWRPWLACMEQQTRYFERRHPE 276 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEECTHHHHHHH-HHHTTTCHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCCHHHHHHHH-HhhCCchhhHHHHHHHHHHhCCC
Confidence 122222333221 1145799999999999987777889999998754332111111 111112222332211 1
Q ss_pred -CCCccchhHhHHHHHHHHHh
Q 004732 570 -HLTEKADVYSFGIVALEIVS 589 (733)
Q Consensus 570 -~~~~~~Dv~s~Gvil~ellt 589 (733)
....+.+.|.+-..+..+..
T Consensus 277 ~~~~~r~~~y~l~~~l~~l~~ 297 (362)
T 3ovc_A 277 LAGSPRLRAYMLRIGLDQLYQ 297 (362)
T ss_dssp SSSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 11446677887777766654
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.44 E-value=7.3e-06 Score=87.62 Aligned_cols=240 Identities=11% Similarity=0.060 Sum_probs=122.1
Q ss_pred eecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCCcCC
Q 004732 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNL 91 (733)
Q Consensus 12 ~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 91 (733)
|+.....++++.+.. +++.+-..+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++.+-..+|... +|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 344556677777764 688777778888999999999754 665666677776 6777777654 443444556553 78
Q ss_pred ceeeccCccccccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc---------------------
Q 004732 92 EKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA--------------------- 150 (733)
Q Consensus 92 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--------------------- 150 (733)
+.+.+..+-.. .....|.+ .+|+.+.+..+ ++......|..+.+|+.+.+..+...
T Consensus 116 ~~i~lp~~~~~-i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGATTE-IGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTTCCE-ECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCcccc-cccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 88888654322 22233333 24444444332 22222333444444444443322110
Q ss_pred --------------cCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcEEEc
Q 004732 151 --------------GPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDL 215 (733)
Q Consensus 151 --------------~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 215 (733)
......+....+|+.+.+..+ +..+....+... .|+.+.+..+ ++.....+|.++.+|+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 193 AKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 011223333444554444332 222222222222 4555555543 44344455555666666665
Q ss_pred cCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeecc
Q 004732 216 SFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLS 262 (733)
Q Consensus 216 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls 262 (733)
..+ ++......|.++.+|+.+.+.++.+...-...+ ..+|+.+++.
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 433 333344455566666666665555542222333 2345555554
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=1.5e-06 Score=90.14 Aligned_cols=137 Identities=19% Similarity=0.181 Sum_probs=95.6
Q ss_pred cCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCC---ceeeEeeEEE-eCCeEEEEEEccCC
Q 004732 398 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHP---NLVKLYGCCI-EGNQLLLIYEYLEN 473 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~ 473 (733)
.+.++.|....||+. |..+++|... .......+.+|+++|+.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 346788888899987 5678888853 233456788999999999753 2445666664 34567899999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC--------------------------------------------
Q 004732 474 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE-------------------------------------------- 509 (733)
Q Consensus 474 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------------- 509 (733)
..+.+... ..++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88876321 1234455555566666666655542
Q ss_pred -------------CCCCeecCCCCCCcEEecC---CCCe-EEcccCccccC
Q 004732 510 -------------SRIKVVHRDIKATNVLLDK---DLNS-KISDFGLAKLD 543 (733)
Q Consensus 510 -------------~~~~ivH~Dik~~Nill~~---~~~~-kl~DfGla~~~ 543 (733)
.++.++|+|+++.||+++. ++.+ .|+||+.+...
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2234699999999999997 4554 89999988753
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=4e-08 Score=93.81 Aligned_cols=113 Identities=23% Similarity=0.276 Sum_probs=91.3
Q ss_pred cccceeeeeccccc-cccc----cCCccccCCCCCCeeeccccccccc----cchhccCCCCCCEEEccccccccc----
Q 004732 14 KQKTVNQKRVLKEQ-NLTG----VLPPKLAELTFLQDISLIANRLKGP----IPKYLANISTLVNLTVQYNQFSGE---- 80 (733)
Q Consensus 14 ~~~~~~~~l~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~---- 80 (733)
...+.+++|+|++| +|+. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 33566889999999 8875 3455677789999999999999753 455667778999999999999853
Q ss_pred CCccccCCcCCceeec--cCcccccc----CCccccCCCCCCEEEeeCCccc
Q 004732 81 LPEELGSLLNLEKLHL--SSNNFTGE----LPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 81 ~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566788889999999 88999854 3455666799999999999987
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=3.2e-06 Score=85.80 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=97.6
Q ss_pred cccCCCcc-cEEEccc-CCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEccCCCCH
Q 004732 400 NIGEGGFG-PVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYLENNSL 476 (733)
Q Consensus 400 ~lg~G~~g-~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL 476 (733)
.+..|..| .||+... .++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+++..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455555 6898764 3567889998643 23457888999998884 22356788899999999999999999988
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-----------------------------------------------
Q 004732 477 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGE----------------------------------------------- 509 (733)
Q Consensus 477 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------------- 509 (733)
.+..... ......++.++++.|+.||..
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7765321 233455667777777777741
Q ss_pred --------CCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 510 --------SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 510 --------~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
.++.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112278999999999999877677999998763
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.35 E-value=6.1e-06 Score=88.20 Aligned_cols=244 Identities=11% Similarity=0.002 Sum_probs=155.9
Q ss_pred eeeeecccceeeeeccccccccccCCccccCCCCCCeeeccccccccccchhccCCCCCCEEEcccccccccCCccccCC
Q 004732 9 VFHFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSL 88 (733)
Q Consensus 9 ~~~~~~~~~~~~~l~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 88 (733)
...-|.+++.++++.|.. +++.+-..+|.+. +|+.+.+..+ ++.+...+|.. .+|+.+.+..+-.. .....|.+.
T Consensus 61 g~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~~~-i~~~~F~~~ 135 (379)
T 4h09_A 61 GEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGATTE-IGNYIFYNS 135 (379)
T ss_dssp CTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTCCE-ECTTTTTTC
T ss_pred HHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcccc-ccccccccc
Confidence 334567778888999875 5876767788776 6888877654 55344455655 47888888765332 333444443
Q ss_pred cCCceeeccCccccccCCccccCCCCCCEEEeeCCccc-----------------------------------cCCCccc
Q 004732 89 LNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFT-----------------------------------GQIPSFI 133 (733)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----------------------------------~~~~~~~ 133 (733)
+|+.+.+..+ ++......|..+.+|+.+.+..+... ......+
T Consensus 136 -~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 213 (379)
T 4h09_A 136 -SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGF 213 (379)
T ss_dssp -CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTT
T ss_pred -eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccc
Confidence 4555555433 33234444555555555554433211 1223345
Q ss_pred cccCCCCEEEccCCCCccCCCCCCCCcCCcCeeecccccCCCCCccccccc-cccEEEcccCccCCCCCccccCCCCCcE
Q 004732 134 QNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKV 212 (733)
Q Consensus 134 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 212 (733)
..+.+|+.+.+..+ +.......+.++.+|+.+.+..+ +..+....+.+. +|+.+.+..+ ++......|.++.+|+.
T Consensus 214 ~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 214 SYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred ccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 56677888777654 44355667788889999888764 555555555554 6888888654 55466677888999999
Q ss_pred EEccCCcccCCCCCCcCCCCCCCEEEecCCcccccCChhh--hcCCCeeeccc
Q 004732 213 LDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSY 263 (733)
Q Consensus 213 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--l~~l~~l~ls~ 263 (733)
+.+.++.++......|.++.+|+.+.+..+ ++..-..++ ..+|+.+.+..
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 999988888777788999999999998755 442223333 35567666643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18 E-value=8.3e-07 Score=94.18 Aligned_cols=80 Identities=6% Similarity=0.034 Sum_probs=54.5
Q ss_pred cCcc-cCCCcccEEEcccC-------CCcEEEEEEccccC---hhcHHHHHHHHHHHHhCC-C--CceeeEeeEEEeC--
Q 004732 398 DNNI-GEGGFGPVYKGLLA-------DGTAIAVKQLSSKS---KQGNREFINEIGMISALQ-H--PNLVKLYGCCIEG-- 461 (733)
Q Consensus 398 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 461 (733)
.+.| +.|....+|+.... +++.+++|...... ......+.+|+.+++.+. + -.+.+++.++.++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999988754 26788899864322 001245678888888884 2 2456677777654
Q ss_pred -CeEEEEEEccCCCCHH
Q 004732 462 -NQLLLIYEYLENNSLA 477 (733)
Q Consensus 462 -~~~~lV~e~~~~gsL~ 477 (733)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999986653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.06 E-value=9.4e-06 Score=87.37 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=49.4
Q ss_pred cCcccCCCcccEEEcccC-CCcEEEEEEccccCh-------hcHHHHHHHHHHHHhCCC--Ccee-eEeeEEEeCCeEEE
Q 004732 398 DNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK-------QGNREFINEIGMISALQH--PNLV-KLYGCCIEGNQLLL 466 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l 466 (733)
.+.||.|.++.||+++.. +++.|+||....... .....+..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999754 468899997643211 122456778888887742 4444 44433 4455689
Q ss_pred EEEccCCC
Q 004732 467 IYEYLENN 474 (733)
Q Consensus 467 V~e~~~~g 474 (733)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.04 E-value=1.8e-05 Score=83.07 Aligned_cols=138 Identities=17% Similarity=0.249 Sum_probs=80.1
Q ss_pred CcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC-----CCceeeEe-e--EEEeCCeEEEEEEc
Q 004732 399 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-----HPNLVKLY-G--CCIEGNQLLLIYEY 470 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lV~e~ 470 (733)
+.|+.|..+.||+....+| .+++|..... ...+..|+++++.+. .|.++... | +...++..++||+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999887655 4889988642 133344555555443 34444311 1 22356778999999
Q ss_pred cCCCCHH--------------HHHHh--cCC-----------CCCHHHHH------------------------------
Q 004732 471 LENNSLA--------------RALFE--HRL-----------KLDWPTRR------------------------------ 493 (733)
Q Consensus 471 ~~~gsL~--------------~~l~~--~~~-----------~l~~~~~~------------------------------ 493 (733)
++|..+. ..+|. ... .-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11221 110 01232210
Q ss_pred -HHHHHHHHHHHHHHc----------CCCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 494 -RICLGIARGLAYLHG----------ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 494 -~i~~~ia~~l~~LH~----------~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
.+...+.+++++|++ ..+..++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111224446667763 023459999999999999888889999999875
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.91 E-value=4.4e-06 Score=77.76 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=58.8
Q ss_pred CCCCeeeccccccccccchhccCCCCCCEEEccccc-ccccCCccccCC----cCCceeeccCcc-ccccCCccccCCCC
Q 004732 41 TFLQDISLIANRLKGPIPKYLANISTLVNLTVQYNQ-FSGELPEELGSL----LNLEKLHLSSNN-FTGELPKTFAKLTN 114 (733)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 114 (733)
-+|+.|||+++.|+..--..+.++++|++|+|++|. |+..--..+..+ ++|++|+|++|. ||..--..++++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888877666677788888888888874 664433445554 367888887763 66544455667777
Q ss_pred CCEEEeeCCc
Q 004732 115 MKDFRISDNQ 124 (733)
Q Consensus 115 L~~L~l~~N~ 124 (733)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777774
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=7e-05 Score=77.26 Aligned_cols=137 Identities=16% Similarity=0.140 Sum_probs=92.3
Q ss_pred ccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCC---CCceeeEeeEEEeCCeEEEEEEccCC
Q 004732 397 TDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQ---HPNLVKLYGCCIEGNQLLLIYEYLEN 473 (733)
Q Consensus 397 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~~ 473 (733)
..+.|+.|....+|+... ++..+++|..... ....+.+|++.|+.+. ...+.++++++..++..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 446789999999999876 4678889986532 3467888999988884 25677888888888899999999999
Q ss_pred CCHH--------H---HHHhcCC--C-------------------CCHHHHH---HHH----------------HHHHHH
Q 004732 474 NSLA--------R---ALFEHRL--K-------------------LDWPTRR---RIC----------------LGIARG 502 (733)
Q Consensus 474 gsL~--------~---~l~~~~~--~-------------------l~~~~~~---~i~----------------~~ia~~ 502 (733)
..+. + .++.... . -+|.+.. ++. ..+.+.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 8642 1 2232111 1 1354321 111 111111
Q ss_pred -HHHHHc-CCCCCeecCCCCCCcEEecCCCCeEEcccC
Q 004732 503 -LAYLHG-ESRIKVVHRDIKATNVLLDKDLNSKISDFG 538 (733)
Q Consensus 503 -l~~LH~-~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 538 (733)
...|.. ..++.++|+|+.+.|++++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223432 2345689999999999999887 8899984
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.81 E-value=5.1e-05 Score=77.61 Aligned_cols=79 Identities=22% Similarity=0.225 Sum_probs=57.1
Q ss_pred CccccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCC---ceeeEeeEEEeCCeEEEEEEc
Q 004732 394 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHP---NLVKLYGCCIEGNQLLLIYEY 470 (733)
Q Consensus 394 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~ 470 (733)
.......+|.|..+.||+.++.||+.|++|+...........|.+|++.|+.+.-. -+.+++++ .. .++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEe
Confidence 44556789999999999999999999999987554333345688899999988532 23344443 22 3789999
Q ss_pred cCCCCH
Q 004732 471 LENNSL 476 (733)
Q Consensus 471 ~~~gsL 476 (733)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 988753
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=9.9e-06 Score=75.39 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=48.2
Q ss_pred CCCCEEEcccccccccCCccccCCcCCceeeccCcc-ccccCCccccCC----CCCCEEEeeCCc-cccCCCccccccCC
Q 004732 65 STLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNN-FTGELPKTFAKL----TNMKDFRISDNQ-FTGQIPSFIQNWTK 138 (733)
Q Consensus 65 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~ 138 (733)
-+|+.|||+++.++..--..+..+++|+.|+|++|. |+..--..++.+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777665444556666677777777663 554333444443 356666666663 55333334555666
Q ss_pred CCEEEccCC
Q 004732 139 LEKLFIQPS 147 (733)
Q Consensus 139 L~~L~l~~N 147 (733)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666654
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.59 E-value=0.00023 Score=77.07 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=44.9
Q ss_pred ccCcccCCCcccEEEcccCCCcEEEEEEcccc------C-h--hcHHHHHHHHHHHH-hCCCCceeeEeeEEEeCCeEEE
Q 004732 397 TDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK------S-K--QGNREFINEIGMIS-ALQHPNLVKLYGCCIEGNQLLL 466 (733)
Q Consensus 397 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~-~--~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~l 466 (733)
..+.||.|..+.||++.. +++.++||..... . . .....+..|+..+. ......+.+++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 346789999999999864 4678999943211 0 0 12233444443332 22234455666554 566799
Q ss_pred EEEcc-CC
Q 004732 467 IYEYL-EN 473 (733)
Q Consensus 467 V~e~~-~~ 473 (733)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.49 E-value=3.1e-05 Score=73.42 Aligned_cols=113 Identities=15% Similarity=0.184 Sum_probs=64.2
Q ss_pred ccCCCCCCeeecccc-cccc----ccchhccCCCCCCEEEcccccccccCC----ccccCCcCCceeeccCccccccC--
Q 004732 37 LAELTFLQDISLIAN-RLKG----PIPKYLANISTLVNLTVQYNQFSGELP----EELGSLLNLEKLHLSSNNFTGEL-- 105 (733)
Q Consensus 37 l~~l~~L~~L~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~-- 105 (733)
+.+-+.|+.|+|++| +|.. .+...+...+.|+.|+|++|.|....- ..+..-+.|+.|+|++|.|+...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 334466777777774 6653 244556666777777777777763322 22344566777777777776432
Q ss_pred --CccccCCCCCCEEEeeCCc---ccc----CCCccccccCCCCEEEccCCCC
Q 004732 106 --PKTFAKLTNMKDFRISDNQ---FTG----QIPSFIQNWTKLEKLFIQPSGL 149 (733)
Q Consensus 106 --p~~~~~l~~L~~L~l~~N~---l~~----~~~~~~~~l~~L~~L~l~~N~l 149 (733)
-+.+..-+.|++|+|++|. +.. .+...+..-+.|..|+++.|.+
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2334445567777776542 221 1223344445666666665544
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.0006 Score=70.02 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=74.5
Q ss_pred cCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce-eeEeeEEEeCCeEEEEEEcc-CCCC
Q 004732 398 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL-VKLYGCCIEGNQLLLIYEYL-ENNS 475 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~~gs 475 (733)
.+.|+.|....+|+. ..+++|......... ....+|+.+++.+....+ .+++++ +++.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 567889999999998 568888875432111 123467777777643333 344443 344457899999 6544
Q ss_pred HHHH------------------HHhcCCCCC-----HHHHHHHHH--------------HHHHHH----HHHHc-CCCCC
Q 004732 476 LARA------------------LFEHRLKLD-----WPTRRRICL--------------GIARGL----AYLHG-ESRIK 513 (733)
Q Consensus 476 L~~~------------------l~~~~~~l~-----~~~~~~i~~--------------~ia~~l----~~LH~-~~~~~ 513 (733)
+... +|.....++ +.....+.. .+.+.+ +.+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4211 111111111 111111100 011111 11111 12334
Q ss_pred eecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 514 VVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 514 ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
++|+|+.+.||+ ..++.+.++||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 799999999999 5667889999998864
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.23 E-value=0.0018 Score=67.33 Aligned_cols=140 Identities=13% Similarity=0.134 Sum_probs=82.0
Q ss_pred CcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCc--eeeEeeE-----EEeCCeEEEEEEcc
Q 004732 399 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN--LVKLYGC-----CIEGNQLLLIYEYL 471 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lV~e~~ 471 (733)
..++ |....||+....+|+.+++|...... .....+..|..+++.+.... +.+++.. ...++..++||+|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 88889999888778889999985321 23456677888877774222 3334432 23356678999999
Q ss_pred CCCCHH-----H------H---HHh--c------CCCCCHHHH----HHH---------------HHHHHHHHHHHHc--
Q 004732 472 ENNSLA-----R------A---LFE--H------RLKLDWPTR----RRI---------------CLGIARGLAYLHG-- 508 (733)
Q Consensus 472 ~~gsL~-----~------~---l~~--~------~~~l~~~~~----~~i---------------~~~ia~~l~~LH~-- 508 (733)
+|..+. . . ++. . ....++... ..+ ...+.+.++.+..
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 885431 1 1 121 1 011222211 001 1111122233321
Q ss_pred --CCCCCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 509 --ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 509 --~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..+..++|||+++.||+++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1233579999999999999 4 899999988763
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.22 E-value=0.0018 Score=67.37 Aligned_cols=140 Identities=18% Similarity=0.159 Sum_probs=72.1
Q ss_pred CcccCCCccc-EEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCc--eeeEeeEEEeCCeEEEEEEccCCCC
Q 004732 399 NNIGEGGFGP-VYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN--LVKLYGCCIEGNQLLLIYEYLENNS 475 (733)
Q Consensus 399 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gs 475 (733)
+.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+.... +.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 6677654467777776543221 23345666666663222 345555533333 78999998777
Q ss_pred HHHHHHhcC-------------------------CCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 004732 476 LARALFEHR-------------------------LKLDWPTRR-------R-------------ICLGIARGLAYLH--- 507 (733)
Q Consensus 476 L~~~l~~~~-------------------------~~l~~~~~~-------~-------------i~~~ia~~l~~LH--- 507 (733)
+.+++.... ..++..... . ....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654442110 011111100 0 0001112222221
Q ss_pred cCCCCCeecCCCCCCcEEecCC----CCeEEcccCccccC
Q 004732 508 GESRIKVVHRDIKATNVLLDKD----LNSKISDFGLAKLD 543 (733)
Q Consensus 508 ~~~~~~ivH~Dik~~Nill~~~----~~~kl~DfGla~~~ 543 (733)
...+..++|||+.+.|||++.+ ..+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123458999999999999875 67899999988753
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.18 E-value=8.9e-05 Score=70.31 Aligned_cols=112 Identities=11% Similarity=0.111 Sum_probs=84.6
Q ss_pred ccceeeeeccccc-cccc----cCCccccCCCCCCeeeccccccccc----cchhccCCCCCCEEEcccccccccC----
Q 004732 15 QKTVNQKRVLKEQ-NLTG----VLPPKLAELTFLQDISLIANRLKGP----IPKYLANISTLVNLTVQYNQFSGEL---- 81 (733)
Q Consensus 15 ~~~~~~~l~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~---- 81 (733)
+-+.+++|+|++| +|.. .+-+.+..-+.|+.|+|++|.|... +...+...+.|++|+|++|.|+...
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3455788899985 7763 3556677789999999999999853 4455667899999999999998433
Q ss_pred CccccCCcCCceeeccCc---cccc----cCCccccCCCCCCEEEeeCCccc
Q 004732 82 PEELGSLLNLEKLHLSSN---NFTG----ELPKTFAKLTNMKDFRISDNQFT 126 (733)
Q Consensus 82 p~~~~~l~~L~~L~Ls~N---~l~~----~~p~~~~~l~~L~~L~l~~N~l~ 126 (733)
-.++..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 234666678999999875 3442 24455667789999999988765
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.16 E-value=0.00052 Score=74.31 Aligned_cols=72 Identities=17% Similarity=0.234 Sum_probs=49.0
Q ss_pred cCcccCCCcccEEEcccCC--------CcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce-eeEeeEEEeCCeEEEEE
Q 004732 398 DNNIGEGGFGPVYKGLLAD--------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL-VKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~ 468 (733)
.+.|+.|-...||++...+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 3567888889999998653 578999987432 112456689998888854344 45666543 2 3899
Q ss_pred EccCCCC
Q 004732 469 EYLENNS 475 (733)
Q Consensus 469 e~~~~gs 475 (733)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.02 E-value=0.0014 Score=67.80 Aligned_cols=140 Identities=17% Similarity=0.163 Sum_probs=79.0
Q ss_pred CcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCc--eeeEee------EEEeCCeEEEEEEc
Q 004732 399 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN--LVKLYG------CCIEGNQLLLIYEY 470 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~------~~~~~~~~~lV~e~ 470 (733)
+.|+.|....+|+....+| .+++|...... ....+..|+.+++.+.... +.+++. +....+..++|++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577888899999887665 68889876521 1234556777776664222 222331 12234677999999
Q ss_pred cCCCCHHH--------------HHHhcCCC--------C---CHHHHHH------------HHHHHHHHHHHHHcC----
Q 004732 471 LENNSLAR--------------ALFEHRLK--------L---DWPTRRR------------ICLGIARGLAYLHGE---- 509 (733)
Q Consensus 471 ~~~gsL~~--------------~l~~~~~~--------l---~~~~~~~------------i~~~ia~~l~~LH~~---- 509 (733)
++|..+.. .++..... . .|..... +...+.+.++++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99865310 12211000 1 1322111 001244455555531
Q ss_pred CCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 510 SRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 510 ~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
.+..++|+|+++.||+++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23458999999999999987556899999775
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99 E-value=0.0022 Score=67.80 Aligned_cols=138 Identities=19% Similarity=0.258 Sum_probs=81.2
Q ss_pred CcccCCCcccEEEcccC--------CCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce-eeEeeEEEeCCeEEEEEE
Q 004732 399 NNIGEGGFGPVYKGLLA--------DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL-VKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e 469 (733)
+.|..|-...+|+.... +++.|++|+.... ......+.+|.++++.+.-..+ .++++++. + .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEE
Confidence 46777888899998764 3578999986432 2234566789999888853233 45665543 2 39999
Q ss_pred ccCCCCHHH--------------H---HHhcC----CCCC--HHHHHHHHHHHHH-------------------HHHH--
Q 004732 470 YLENNSLAR--------------A---LFEHR----LKLD--WPTRRRICLGIAR-------------------GLAY-- 505 (733)
Q Consensus 470 ~~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~ia~-------------------~l~~-- 505 (733)
|++|..|.. . +|... .... |.+..++..++.. .+.+
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999865421 1 11111 1122 3444445443321 2233
Q ss_pred --HHcC-CCCCeecCCCCCCcEEecCC----CCeEEcccCccc
Q 004732 506 --LHGE-SRIKVVHRDIKATNVLLDKD----LNSKISDFGLAK 541 (733)
Q Consensus 506 --LH~~-~~~~ivH~Dik~~Nill~~~----~~~kl~DfGla~ 541 (733)
|... .+..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3222 23357999999999999876 689999999875
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.71 E-value=0.0038 Score=67.85 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=47.5
Q ss_pred cCcccCCCcccEEEcccCC-CcEEEEEEccccChhcHHHHHHHHHHHHhCCCCcee-eEeeEEEeCCeEEEEEEccCCCC
Q 004732 398 DNNIGEGGFGPVYKGLLAD-GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLV-KLYGCCIEGNQLLLIYEYLENNS 475 (733)
Q Consensus 398 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~gs 475 (733)
.+.|+.|-...+|+....+ +..+++|+........ .+-.+|..+++.+...++. ++++++ .+ .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence 4568888889999998765 5788899874432111 1125788899988655554 566665 22 35999998754
Q ss_pred H
Q 004732 476 L 476 (733)
Q Consensus 476 L 476 (733)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.67 E-value=0.012 Score=61.24 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=27.6
Q ss_pred CCeecCCCCCCcEEecCCCCeEEcccCcccc
Q 004732 512 IKVVHRDIKATNVLLDKDLNSKISDFGLAKL 542 (733)
Q Consensus 512 ~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 542 (733)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4589999999999999888899999988764
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.003 Score=55.70 Aligned_cols=60 Identities=20% Similarity=0.119 Sum_probs=47.6
Q ss_pred cEEEcccCccC-CCCCccccCCCCCcEEEccCCcccCCCCCCcCCCCCCCEEEecCCcccccC
Q 004732 187 TKLILRNCNIT-GELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAI 248 (733)
Q Consensus 187 ~~L~l~~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 248 (733)
..++.+++.|+ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 46788888887 3455433 236999999999999777778899999999999999997643
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.46 E-value=0.0037 Score=55.12 Aligned_cols=56 Identities=14% Similarity=0.323 Sum_probs=26.7
Q ss_pred eeeccCcccc-ccCCccccCCCCCCEEEeeCCccccCCCccccccCCCCEEEccCCCCc
Q 004732 93 KLHLSSNNFT-GELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA 150 (733)
Q Consensus 93 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 150 (733)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4445555543 23332221 24555555555555444444555555555555555543
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.42 E-value=0.0031 Score=66.75 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=42.8
Q ss_pred CcccCCCcccEEEcccCC---------CcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce-eeEeeEEEeCCeEEEEE
Q 004732 399 NNIGEGGFGPVYKGLLAD---------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL-VKLYGCCIEGNQLLLIY 468 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~ 468 (733)
..|+.|....+|+....+ ++.+++|........ ..+...|.++++.+...++ .++++.. .+ ++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEE
Confidence 467778888999987654 268888887543221 1123568888877753333 3555443 22 6899
Q ss_pred EccCCCC
Q 004732 469 EYLENNS 475 (733)
Q Consensus 469 e~~~~gs 475 (733)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.23 E-value=0.017 Score=55.04 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=69.0
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccccCcccCcccccc
Q 004732 474 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 553 (733)
Q Consensus 474 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 553 (733)
-+|.++|...+.+++++++|.++.|.+++|.-+-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------------
Confidence 38999999888899999999999999999877621100 1 1333457999999999988764 2211
Q ss_pred cccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCC
Q 004732 554 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSN 593 (733)
Q Consensus 554 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p 593 (733)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112356777542 3456788999999999998865444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.93 E-value=0.016 Score=61.57 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=79.5
Q ss_pred CcccCCCcccEEEcccCC--------CcEEEEEEccccChh-----------c-------HHHHHHHHHHHHhCCCCc-e
Q 004732 399 NNIGEGGFGPVYKGLLAD--------GTAIAVKQLSSKSKQ-----------G-------NREFINEIGMISALQHPN-L 451 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~h~n-i 451 (733)
+.|..|-...+|+....+ ++.|.++........ . ......|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345567778889877653 367888876443211 0 012335888888885333 4
Q ss_pred eeEeeEEEeCCeEEEEEEccCCCCHHH--------------H---HHhcC----CCCC--HHHHHHHHHHHH--------
Q 004732 452 VKLYGCCIEGNQLLLIYEYLENNSLAR--------------A---LFEHR----LKLD--WPTRRRICLGIA-------- 500 (733)
Q Consensus 452 v~l~~~~~~~~~~~lV~e~~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~ia-------- 500 (733)
.++++++. + .+|+||+++-+|.. . +|... .... |....++..++.
T Consensus 138 Pkl~~~~~--~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP--Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET--T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC--C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 45666653 2 28999999754411 1 11111 1122 234444443321
Q ss_pred --------------HHH----HHHHcC-CCCCeecCCCCCCcEEecCC------CCeEEcccCccc
Q 004732 501 --------------RGL----AYLHGE-SRIKVVHRDIKATNVLLDKD------LNSKISDFGLAK 541 (733)
Q Consensus 501 --------------~~l----~~LH~~-~~~~ivH~Dik~~Nill~~~------~~~kl~DfGla~ 541 (733)
.-+ ++|... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223332 23347899999999999887 789999998875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.18 E-value=0.019 Score=61.50 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=46.7
Q ss_pred CcccCCCcccEEEcccCC--------CcEEEEEEccccChhcHHHHHHHHHHHHhCCCCce-eeEeeEEEeCCeEEEEEE
Q 004732 399 NNIGEGGFGPVYKGLLAD--------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNL-VKLYGCCIEGNQLLLIYE 469 (733)
Q Consensus 399 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e 469 (733)
+.+..|-...+|+....+ ++.|++++....... .-+..+|.++++.+.-.++ .++++.+ .+ ++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEEE
Confidence 456678888999988653 578999986543221 1123568888887753333 3455432 22 78999
Q ss_pred ccCCCCH
Q 004732 470 YLENNSL 476 (733)
Q Consensus 470 ~~~~gsL 476 (733)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.82 E-value=0.43 Score=50.68 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=24.6
Q ss_pred eecCCCCCCcEEe------cCCCCeEEcccCcccc
Q 004732 514 VVHRDIKATNVLL------DKDLNSKISDFGLAKL 542 (733)
Q Consensus 514 ivH~Dik~~Nill------~~~~~~kl~DfGla~~ 542 (733)
++|+|+.+.|||+ +++..++++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566799999998863
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.95 E-value=2 Score=40.65 Aligned_cols=114 Identities=8% Similarity=0.079 Sum_probs=79.3
Q ss_pred CCCceeeEeeEEEeCCeEEEEEEccCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeecCCCCCCcEE
Q 004732 447 QHPNLVKLYGCCIEGNQLLLIYEYLENN-SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 525 (733)
Q Consensus 447 ~h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik~~Nil 525 (733)
.||++++. .+-.+++.+.+.|+.-+.+ ++.. -...+...+++++..|+....+++.. +|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 68998876 4555667666666654422 2222 24678899999999999988776643 78899999999
Q ss_pred ecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 526 LDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 526 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
++.++.+++.-.|+...+.+.. +.+| .=.-.+=+++..+++++..|
T Consensus 112 f~~~~~p~i~~RGik~~l~P~~-------------~~ee----------~fL~qyKAliiall~~K~~F 157 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVDPLP-------------VSEA----------EFLTRYKALVICAFNEKQSF 157 (215)
T ss_dssp ECTTSCEEESCCEETTTBSCCC-------------CCHH----------HHHHHHHHHHHHHHCTTCCH
T ss_pred EcCCCCEEEEEccCccCCCCCC-------------CCHH----------HHHHHHHHHHHHHHcCCCCH
Confidence 9999999999888654322210 1122 22235677888899998776
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.55 E-value=4 Score=38.76 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=78.2
Q ss_pred CCCceeeEeeEEEeCCeEEEEEEccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH-HHHcCCCCCeecCCCCCCcEE
Q 004732 447 QHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLA-YLHGESRIKVVHRDIKATNVL 525 (733)
Q Consensus 447 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dik~~Nil 525 (733)
.||++ -..+-.+++.+.+.|+.-+++-=...+ ..++...+++++..|+.... +++. -+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEE
Confidence 68888 334446677777778765444323333 36788999999999988777 6654 478889999999
Q ss_pred ecCCCCeEEcccCccccCcccCcccccccccCCCcccHHHHhhCCCCccchhHhHHHHHHHHHhCCCCC
Q 004732 526 LDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 594 (733)
Q Consensus 526 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~elltg~~p~ 594 (733)
+|.++.++|.-.|+-..+.+.. +.+|-+ .-.+=+++..++.++..|
T Consensus 117 f~~~~~p~i~hRGi~~~lpP~e-------------~~ee~f----------l~qyKali~all~~K~~F 162 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESLPPDE-------------WDDERL----------LREVKATVLALTEGEYRF 162 (219)
T ss_dssp ECTTCCEEESCCEETTTBSSCS-------------CCHHHH----------HHHHHHHHHHHTTCSSCH
T ss_pred EeCCCcEEEEEcCCcccCCCCC-------------CCHHHH----------HHHHHHHHHHHHcCCCCH
Confidence 9999999999888754322211 222322 225667888888887655
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.40 E-value=0.23 Score=53.87 Aligned_cols=62 Identities=8% Similarity=0.124 Sum_probs=18.8
Q ss_pred cccCcccCCCcccEEEcccCC-CcEEEE------EEcccc--ChhcHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004732 396 ATDNNIGEGGFGPVYKGLLAD-GTAIAV------KQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE 460 (733)
Q Consensus 396 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 460 (733)
...+.|| ||.||+|.+.. ..+||| |..+.. .......|.+|..+++.++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3445676 99999999754 367888 766542 22333568889999999999999999888653
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=52.22 E-value=25 Score=28.63 Aligned_cols=38 Identities=8% Similarity=0.119 Sum_probs=15.8
Q ss_pred ccccCCcCCceeeccCccccccCCccccCCCCCCEEEee
Q 004732 83 EELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRIS 121 (733)
Q Consensus 83 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 121 (733)
.+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444432 222333344444444444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.82 E-value=33 Score=27.85 Aligned_cols=46 Identities=24% Similarity=0.185 Sum_probs=25.6
Q ss_pred ccccccchhccCCCCCCEEEcccccccccCCccccCCcCCceeeccC
Q 004732 52 RLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS 98 (733)
Q Consensus 52 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 98 (733)
.++.+-...|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344455666666666666554 3324445566666666666654
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=44.84 E-value=1.5e+02 Score=33.30 Aligned_cols=45 Identities=24% Similarity=0.207 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH--HHHHHHcCCCCCeecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 490 PTRRRICLGIAR--GLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 490 ~~~~~i~~~ia~--~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
..+..++..+|- -+.|+=. =+|=+++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 345555555442 3444422 37889999999999999999999874
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=36.51 E-value=2.6e+02 Score=30.75 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=50.1
Q ss_pred eeEeeEEEeCCeEEEEEEccCCCCHHHHHHh----------cCC------CCCHHHHHHHHHHHHH--HHHHHHcCCCCC
Q 004732 452 VKLYGCCIEGNQLLLIYEYLENNSLARALFE----------HRL------KLDWPTRRRICLGIAR--GLAYLHGESRIK 513 (733)
Q Consensus 452 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----------~~~------~l~~~~~~~i~~~ia~--~l~~LH~~~~~~ 513 (733)
++.+.+........+ .|++++.++.+.+.. ... ...|..+..++..+|- -+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 344555555444443 577776555554431 110 1224556666655543 4555532
Q ss_pred eecCCCCCCcEEecCCCCeEEcccCccc
Q 004732 514 VVHRDIKATNVLLDKDLNSKISDFGLAK 541 (733)
Q Consensus 514 ivH~Dik~~Nill~~~~~~kl~DfGla~ 541 (733)
=+|=.++|||++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 36778999999999999999999874
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.39 E-value=54 Score=33.12 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=71.8
Q ss_pred ccCcccCCCcccEEEcccCCCcEEEEEEccccChhcHHHHHHHHHHHHhCCCCceeeEeeE-------------EE----
Q 004732 397 TDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGC-------------CI---- 459 (733)
Q Consensus 397 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------~~---- 459 (733)
..+..-.|. +.||.+.. ++..|+||.. .....+-|..++...=.+.-|+..-+.-. +.
T Consensus 73 ~I~~s~~Gs-tgvff~~t-d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 73 GIERSEKGT-EGLFFVET-ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEEECCSTT-SCEEEEEE-SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEEeccCCC-CCeEEEEe-CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 334445565 45555554 5788999944 22233445555555555666664222111 00
Q ss_pred -----eCCeEEEEEEccCCCCHHHHHHhc-CCCCCHHHHHHHHHHH--HHHHHHHHcCC-CCCeec-CCCCCCcEEecCC
Q 004732 460 -----EGNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGI--ARGLAYLHGES-RIKVVH-RDIKATNVLLDKD 529 (733)
Q Consensus 460 -----~~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i--a~~l~~LH~~~-~~~ivH-~Dik~~Nill~~~ 529 (733)
.....+++|+|++|..|.+.-+.. ...+. .+.+.++ +-++.++..++ +.+.++ .--.++|||++.+
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~----~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLT----KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSC----HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcC----HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 122467999999876554321100 00122 1223332 33455555543 333332 2357899999875
Q ss_pred CC-eEEcccCcccc
Q 004732 530 LN-SKISDFGLAKL 542 (733)
Q Consensus 530 ~~-~kl~DfGla~~ 542 (733)
.. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88999999864
Done!